Metagenome / Metatranscriptome Family F080352

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080352
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	74 residues
Representative Sequence	VRDDGKGIGKRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELVIPCNSVLREPRAVLGGCA
Number of Associated Samples	100
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.51 %
% of genes near scaffold ends (potentially truncated)	94.78 %
% of genes from short scaffolds (< 2000 bps)	93.04 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (10.435 % of family members)
Environment Ontology (ENVO)	Unclassified (26.087 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.913 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.31% β-sheet: 12.24% Coil/Unstructured: 72.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF08447	PAS_3	9.57
PF00989	PAS	9.57
PF08281	Sigma70_r4_2	8.70
PF04542	Sigma70_r2	8.70
PF02518	HATPase_c	5.22
PF04366	Ysc84	4.35
PF13442	Cytochrome_CBB3	3.48
PF11752	DUF3309	1.74
PF13426	PAS_9	1.74
PF00528	BPD_transp_1	0.87
PF05598	DUF772	0.87
PF00034	Cytochrom_C	0.87
PF11821	ActD	0.87
PF03544	TonB_C	0.87
PF01381	HTH_3	0.87
PF07730	HisKA_3	0.87
PF00589	Phage_integrase	0.87
PF00072	Response_reg	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	8.70
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	8.70
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	8.70
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	8.70
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	4.35
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.87
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.87
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.87
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.87
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	63.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.48 %
Unclassified	root	N/A	3.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.74 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.87 %
Unclassified	root	N/A	3.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.87 %
Unclassified	root	N/A	3.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.87 %
Unclassified	root	N/A	3.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.87 %
Unclassified	root	N/A	3.48 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.74 %
Tardiphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga	0.87 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.87 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.87 %
Unclassified	root	N/A	3.48 %
Janibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter	1.74 %
unclassified Collimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → unclassified Collimonas	0.87 %
unclassified Tardiphaga	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga	0.87 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.87 %
Unclassified	root	N/A	3.48 %
Janibacter terrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → Janibacter terrae	1.74 %
Tardiphaga sp. CF115	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. CF115	0.87 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.87 %
Collimonas sp. OK607	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → unclassified Collimonas → Collimonas sp. OK607	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001170\|JGI12704J13340_1006341	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300001471\|JGI12712J15308_10039536	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300002245\|JGIcombinedJ26739_100240142	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300002245\|JGIcombinedJ26739_100551810	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300004091\|Ga0062387_101110302	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300004092\|Ga0062389_101038155	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300004092\|Ga0062389_102564014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300004092\|Ga0062389_102962375	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005435\|Ga0070714_102332780	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005467\|Ga0070706_100454238	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005541\|Ga0070733_11079793	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005591\|Ga0070761_10191267	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005712\|Ga0070764_10620219	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005712\|Ga0070764_10706787	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005921\|Ga0070766_10824198	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300006059\|Ga0075017_101355755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas → unclassified Collimonas → Collimonas sp. OK607	559	Open in IMG/M
3300006162\|Ga0075030_100391894	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006174\|Ga0075014_100261783	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300006797\|Ga0066659_10851971	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300006852\|Ga0075433_11547622	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300009143\|Ga0099792_10046817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2089	Open in IMG/M
3300009672\|Ga0116215_1528440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009764\|Ga0116134_1262175	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300009764\|Ga0116134_1327274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009824\|Ga0116219_10454330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300010339\|Ga0074046_10093291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1947	Open in IMG/M
3300012202\|Ga0137363_10783435	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300012207\|Ga0137381_11396350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300012363\|Ga0137390_10484961	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300012582\|Ga0137358_10965166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → Janibacter terrae	554	Open in IMG/M
3300012917\|Ga0137395_10003256	All Organisms → cellular organisms → Bacteria	8048	Open in IMG/M
3300014162\|Ga0181538_10205307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300014489\|Ga0182018_10084241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1882	Open in IMG/M
3300014655\|Ga0181516_10618398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300017955\|Ga0187817_10566813	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300018023\|Ga0187889_10352733	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300018038\|Ga0187855_10122076	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300018038\|Ga0187855_10639074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Janibacter → Janibacter terrae	620	Open in IMG/M
3300018040\|Ga0187862_10647595	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300018042\|Ga0187871_10087919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1803	Open in IMG/M
3300018043\|Ga0187887_10657886	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300018043\|Ga0187887_10705562	Not Available	596	Open in IMG/M
3300018047\|Ga0187859_10339423	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300018057\|Ga0187858_10710408	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300019260\|Ga0181506_1043413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300020199\|Ga0179592_10221278	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300020579\|Ga0210407_10446957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300020580\|Ga0210403_10106844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2271	Open in IMG/M
3300021171\|Ga0210405_10930166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300021432\|Ga0210384_10083044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2880	Open in IMG/M
3300021433\|Ga0210391_10602161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300021433\|Ga0210391_10696066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300021433\|Ga0210391_11372037	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300021474\|Ga0210390_10032275	All Organisms → cellular organisms → Bacteria	4276	Open in IMG/M
3300022502\|Ga0242646_1029098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300022515\|Ga0224546_1001184	All Organisms → cellular organisms → Bacteria → Acidobacteria	1246	Open in IMG/M
3300022557\|Ga0212123_10538138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300022732\|Ga0224569_112524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300024220\|Ga0224568_1018158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300024271\|Ga0224564_1099819	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300025910\|Ga0207684_10448721	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300026318\|Ga0209471_1302923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300026551\|Ga0209648_10401051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300026557\|Ga0179587_10211313	All Organisms → cellular organisms → Bacteria → Acidobacteria	1232	Open in IMG/M
3300026557\|Ga0179587_10670074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300027439\|Ga0209332_1067811	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300027521\|Ga0209524_1014948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1580	Open in IMG/M
3300027562\|Ga0209735_1011842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1700	Open in IMG/M
3300027562\|Ga0209735_1127842	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300027565\|Ga0209219_1095071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300027583\|Ga0209527_1048370	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300027667\|Ga0209009_1187581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300027696\|Ga0208696_1129553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300027701\|Ga0209447_10100732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300027738\|Ga0208989_10004710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4577	Open in IMG/M
3300027745\|Ga0209908_10007718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1707	Open in IMG/M
3300027783\|Ga0209448_10236625	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300027825\|Ga0209039_10143590	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300027825\|Ga0209039_10293621	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300027829\|Ga0209773_10093170	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300027884\|Ga0209275_10538686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Tardiphaga → unclassified Tardiphaga → Tardiphaga sp. CF115	667	Open in IMG/M
3300027889\|Ga0209380_10661187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300027911\|Ga0209698_10369053	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300027911\|Ga0209698_11264678	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300028017\|Ga0265356_1019101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300028748\|Ga0302156_10450207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300028859\|Ga0302265_1091957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300028871\|Ga0302230_10131399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300028874\|Ga0302155_10080031	All Organisms → cellular organisms → Bacteria	1467	Open in IMG/M
3300029882\|Ga0311368_10347666	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300029907\|Ga0311329_10183694	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300029914\|Ga0311359_10055248	All Organisms → cellular organisms → Bacteria	4169	Open in IMG/M
3300029944\|Ga0311352_10356689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300029951\|Ga0311371_11325112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300029951\|Ga0311371_12328675	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300029956\|Ga0302150_10332937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300030013\|Ga0302178_10469398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300030057\|Ga0302176_10155764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300030507\|Ga0302192_10270181	Not Available	715	Open in IMG/M
3300030580\|Ga0311355_10824177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	850	Open in IMG/M
3300030991\|Ga0073994_10858554	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300031010\|Ga0265771_1009081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300031022\|Ga0138301_1838891	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031028\|Ga0302180_10166264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300031231\|Ga0170824_118589731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300031708\|Ga0310686_104051672	Not Available	771	Open in IMG/M
3300031718\|Ga0307474_11231703	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031753\|Ga0307477_10938149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031823\|Ga0307478_10758961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300031962\|Ga0307479_11224191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300031962\|Ga0307479_12077456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300032515\|Ga0348332_12647086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300033158\|Ga0335077_10251725	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300033983\|Ga0371488_0081610	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.39%
Host-Associated	Host-Associated	2.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.43%
Aquatic	Environmental → Aquatic	26.96%
Plants	Host-Associated → Plants	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.04%
Freshwater	Environmental → Aquatic → Freshwater	21.74%
Peat	Environmental → Terrestrial → Peat	15.65%
Sediment	Environmental → Aquatic → Sediment	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.74%
Loam	Environmental → Terrestrial → Soil → Loam	18.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	19.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.43%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.83%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.83%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.09%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.87%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.87%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001170	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300024220	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU5	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028871	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1	Environmental	Open in IMG/M
3300028874	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_1	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12704J13340_10063412	3300001170	Forest Soil	MSQKDQAIVVSVRDDGKGIDKKIAELRPDSVGVGIGGMKQRAREFGGELRLKNADPGTLLELMIPANSALRESSAVLNEYV*
JGI12712J15308_100395361	3300001471	Forest Soil	DGKGIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPSTSVLRVPSAVLG*
JGIcombinedJ26739_1002401423	3300002245	Forest Soil	GKGIGKKIVELRPDSVGVGIGGMKQRAKELGGVLKLSNLEPGTLVEIEIPCDSGLRDPTTMMNGYGSN*
JGIcombinedJ26739_1005518102	3300002245	Forest Soil	GFIVVSVLDDGKGIDERIAELQPGKVGVGIGGMKQRAREFGGELRLTNSAPGTLLELVIPSTSVMREPSAVLDECR*
Ga0062387_1011103021	3300004091	Bog Forest Soil	DGKGVDKRIAELQPDSVGVGIGGMKQRAREFGGELRLTNANPGTLVELVIPRRSVLRDPSAALTA*
Ga0062389_1010381551	3300004092	Bog Forest Soil	VRDDGKGIGKRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELVIPCNSVLREPRAVLGGCA*
Ga0062389_1025640142	3300004092	Bog Forest Soil	GDGQIVVSVLDDGKGIDERIAELRPEKVGVGIGGMKQRAREFGGELRLRNADPGTVLELLIPSTSVLRESSTVLNGCA*
Ga0062389_1029623752	3300004092	Bog Forest Soil	VRDDGKGIGDRVVEMRGDSVGVGIGGMKQRAKEFGGELRLKNANPGTLVELTLPRTGALRESREVLQS*
Ga0070714_1023327801	3300005435	Agricultural Soil	GISLTQKNGVIVVAVRDDGKGVGKKIVDLEPGSVGVGIGGMKQRAKEFGGELRLINANPGTLVELTIPSSSALRQANAVVNVYTAD*
Ga0070706_1004542381	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KDGLIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNAGPGTLLELRIPSRSVLLEPSAVLR*
Ga0070733_110797932	3300005541	Surface Soil	RDDGKGIDTRVAELQPDSVGVGIGGMKQRAKELGGELRLKNAHPGTLVELLIPSNSVPRETSAALESVPEIVR*
Ga0070761_101912672	3300005591	Soil	DQKISELRPENVGVGIGGMKQRAKEFGGHIRLTNADPGTLLELMIPCSTALRESSTALSAI*
Ga0070764_106202191	3300005712	Soil	GIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPGTSVLRVPSAVLG*
Ga0070764_107067871	3300005712	Soil	RDDGKGIGERIAELQPDSVGVGIGGMKQRAREFGGELRLKNTYPGTLVELTIPYSSVLPEPSAVLDGCQSL*
Ga0070766_108241981	3300005921	Soil	KGIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPGTSVLRVPSAVLG*
Ga0075017_1013557551	3300006059	Watersheds	SIVVSVLDDGKGIDERTAELRPDKVGVGIGGMKQRAREFGGELRLSNVSPGTLLELMIPSNSVLREPNTVLGGCA*
Ga0075030_1003918941	3300006162	Watersheds	DERIAELRPEKVGVGIGGMKQRAREFGGELRLRNADPGTVLELMLPSTSVLRESSAVFDGCA*
Ga0075014_1002617831	3300006174	Watersheds	VGITLTQNNGQIVVAVRDDGKGIGQNIAELRPESVGVGIGGMRQRAKEFGGELRLVNAQPGTLVELRIPYTSVVREPAGVTGS*
Ga0066659_108519711	3300006797	Soil	DALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0075433_115476222	3300006852	Populus Rhizosphere	SVVRREDEVLVRVRDDGKGISENISELRPDSIGVGIGGMSQRAKEFGGELRVTNAHPGTIVEAVIPCRSAVLQESVASSLIAGRAL*
Ga0099792_100468174	3300009143	Vadose Zone Soil	ALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0116215_15284401	3300009672	Peatlands Soil	QREDTMAVAVRDDGKGIGEAIVDLRPDTVGVGIGGMKQRVKEFGGELRLSNTHPGTLVEVMIPCSSLLREPSAVLDGYA*
Ga0116134_12621751	3300009764	Peatland	IAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPCRSVSRDSSPVLDVCASD*
Ga0116134_13272742	3300009764	Peatland	IVVAVRDDGKGIGQRIAELQPDSVGVGIGGMKQRVREFGGELRLTNTHPGTLVELVIPYGSVLQQPSAVPDGSHRKFVNAAIR*
Ga0116219_104543301	3300009824	Peatlands Soil	TQREGEIVVGVRDDGKGIGKRIAELQPDSVGVGIGGMKQRAREFGGALRLTNMNPGTLVEIMIPCGSAQQQRSAVPDGSQKFVDAAVR*
Ga0074046_100932913	3300010339	Bog Forest Soil	LDNGKGIDERITELRPESVGVGIGGMKQRAKEFGGELRLRNADPGTLLELTIPSAPGARELTTVLDRCV*
Ga0137363_107834352	3300012202	Vadose Zone Soil	VAVLDDGKGIDKRVAELRPESVGVGIGGMKQRVKDFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLDGCS*
Ga0137381_113963501	3300012207	Vadose Zone Soil	RVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0137390_104849611	3300012363	Vadose Zone Soil	KRVADLRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR*
Ga0137358_109651661	3300012582	Vadose Zone Soil	WITLNQKDGLIVVAVLDDGKGIDKRIAELRPESVGVGIGGMKQRVKEFGGELRLINADPGTLLELRIPSNSVLLEPSAVLR*
Ga0137395_100032561	3300012917	Vadose Zone Soil	IDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLVREPNPVLEQVR*
Ga0181538_102053072	3300014162	Bog	GTVRDDGNGIAEQIVKFRPESIGIGIGGMRQRVKEFSGELRLTNAQPGTLVEIVIPCDSPTPQKAEATA*
Ga0182018_100842412	3300014489	Palsa	TMAQTEGRIVVAVRDDGKGIGKRVAELQPDSVGVGIGGMKQRAREFGGELRLTNTHPGTLVELIIPCSLVLREPSAVSPGPQKLVDAAIQ*
Ga0181516_106183981	3300014655	Bog	SKVWVTLTQKEETIVVAVRDDGKGIGKKIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAHPGTLVELMIPCRSVLREPTAILGGCA*
Ga0187817_105668131	3300017955	Freshwater Sediment	KGIDERVAELRSEELGVGIGGMKQRAREFGGELRLRNADPGTLLELMIPSSSVLREPSAVLDGCA
Ga0187889_103527332	3300018023	Peatland	KDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPCRSVSRDSSPVLDVCASD
Ga0187855_101220761	3300018038	Peatland	GRISVAVRDDGRGVDKRIAELRPESIGVGLGGMKQRARELGGELRLIDAQPGTLVEITIPCVSGLRDSPPVLDVCASQ
Ga0187855_106390741	3300018038	Peatland	GRISVAVRDDGRGVDKRIAELRPESIGVGLGGMKQRARELGGELRLIDAQPGTLVEITIPCVSGLRDSPPVLDVCASD
Ga0187862_106475951	3300018040	Peatland	VLDGGKGIDERIAELRSEKLGVGIGGMKQRAREFGGELRLRNADPGTLLELMIPSSSILREPSAVLDGCT
Ga0187871_100879191	3300018042	Peatland	HQREGLIVVSVLDDGKGIDERVAELRPEKVGVGIGGMRQRAREFGGELRLRNADPGTLLELVIPANSVLREPSTVLDGCA
Ga0187887_106578862	3300018043	Peatland	GKGIDEQVADLRPEKVGVGIGGMKQRALEFGGELRLRNASPGTLLELVIPTSAVLRDTSAVLEGVRDL
Ga0187887_107055622	3300018043	Peatland	VLDDGKGIDQRVAELRPEKMGVGIGGMRQRAKEFGGELRLTNNQPGTLLEIMIPTNAALREPTPVTA
Ga0187851_100469826	3300018046	Peatland	AELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELVIPSGTALREPSAVLNGCST
Ga0187859_103394231	3300018047	Peatland	RGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPSRSAARDSTPALDACASD
Ga0187858_107104082	3300018057	Peatland	RVAELRPEKVGVGIGGMRQRAREFGGELRLRNADPGTLLELVIPANSVLREPSSVLDGCA
Ga0181506_10434132	3300019260	Peatland	IVVAVRDDGKGIGKRIVELQPDSVGVGIGGMKQRASEFGGELRLTNAHPGTLVELIIPSSSLLRESSAVLVDARSS
Ga0179592_102212781	3300020199	Vadose Zone Soil	NQKDALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRVKDFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLDGCS
Ga0210407_104469572	3300020579	Soil	RDDGKGIGEQIVELRPDSVGVGIGGMKQRARELGGELRLVNAQPGTLVELTIPCGSVLREPNAVMDGCASD
Ga0210403_101068441	3300020580	Soil	LTQKKGLLVVAVRDDGKGIGKKIVDLEPDSVGVGIGGMKQRAKEFGGELRLTNLNPGTLVELMIPYSSGLREAAILEGCTTTEASAESA
Ga0210405_109301661	3300021171	Soil	ITLTQKDGMIVVAVRDDGKGIGQRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELVIPSGSVLQQRNAVPDGSQKFVDAAIR
Ga0210384_100830447	3300021432	Soil	VWITLHQKDGLIVVAVLDDGKGIEKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSTSILPEPSAVLH
Ga0210391_106021611	3300021433	Soil	VTVRDDCKGIGRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAEPGTLVELMIPASSVLRVPAALLDGCA
Ga0210391_106960661	3300021433	Soil	VRDDGKGIGKRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELTIPCSSVLREASPVLEGGPKFVDAGVR
Ga0210391_113720371	3300021433	Soil	AVKDDGKGVGKKIAEMSPDSVGVGIGGMKQRARELGGELRLRNALPGTVVELTIPGRSVSRNSSRMLDVCASD
Ga0210390_100322751	3300021474	Soil	AVRDDGKGIGKRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELTIPCSSVLREASPVLEGGPKFVDAGVR
Ga0242646_10290981	3300022502	Soil	IGQRIAELQPDSVGVGIGGMKQRASEFGGELRLTNTHPGTLVELVIPSGSVLQQRSAVADGSLQKFVDAAIR
Ga0224546_10011842	3300022515	Soil	SVLDDGKGIDQRVADLRHESIGVGIGGMKQRAKEFGGELRLANADPGTLLELVIPSALALREATAILNGCSV
Ga0212123_105381381	3300022557	Iron-Sulfur Acid Spring	IGRKIAELQPDSVGVGIGGMKQRAKEFGGELRLRNMDPGTLVELIIPCSSVLREPSAVLDGCA
Ga0224569_1125241	3300022732	Rhizosphere	ITLTQRDGMIVVAVRDDGKGIGKSIAELRPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELMIPCSSVLREPTVV
Ga0224568_10181582	3300024220	Plant Litter	RIAELQPDSVGVGIGGMKQRAREFGGKLRLTNMHPGTLVELTIPCSSVLREAGAVLDGHPKFVDATVR
Ga0224564_10998192	3300024271	Soil	DGKGVGKKIAEMSPDSVGVGIGGMKQRARELGGELRLRNALPGTVVELTIPSRSVSRDSSPMLDVCASD
Ga0207684_104487212	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KDGLIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNAGPGTLLELRIPSRSVLLEPSAVLR
Ga0209471_13029231	3300026318	Soil	VWINLNQRDGQISVSVLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLVREPNPVLEQVR
Ga0209648_104010511	3300026551	Grasslands Soil	WITLSQREGKIVVDVRDDGKGIGKKIANLQPDSVGVGIGGMKQRAKEFGGELRLTNVHPGTLVELMIPCSSVLREPSGVLTS
Ga0179587_102113132	3300026557	Vadose Zone Soil	KVWITMNQKDALIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRVKDFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLDGCS
Ga0179587_106700741	3300026557	Vadose Zone Soil	DKKIAELRPESIGVGIGGMKQRAKEFGGELRLTNAAPGTLLELMIPCSSALREASPVLDGCV
Ga0209332_10678111	3300027439	Forest Soil	AGAHKVWINLHQRDGRISVTVLDDGKGIEQKVADLRPESVGVGIGGMKQRAKEFGGELRLSNADPGTLLELIIPAHSVGRDPNPVLEAEGEERTTTIKLHV
Ga0209524_10149481	3300027521	Forest Soil	VVSVLDDGKGIDKRVADLRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSRSVLLEPSAVLR
Ga0209735_10118421	3300027562	Forest Soil	KDGQIVVAVLDDGKGIDKKIVEMRPDSVGVGIGGMKQRAREFGGKLRLTNADPGTLLELRIPSNSVLLEPSAVLR
Ga0209735_11278421	3300027562	Forest Soil	GKGIEQKVADLRPESVGVGIGGMKQRAKEFGGELRLSNADPGTLLELIIPAHSVGRDPNPVLEAEGEERTTTIKLHV
Ga0209219_10950711	3300027565	Forest Soil	ITLNQKDGLIVVAVLDDGKGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSKSVLLEPSTVLN
Ga0209527_10483701	3300027583	Forest Soil	LTQNNGLIVVSVRDDGKGIGKKIVDMEPDSVGVGIGGMKQRAREFGGELRLSNANPGTLVELLIPHTSGLREAGALLDAD
Ga0209009_11875811	3300027667	Forest Soil	KGIDKRVAELRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELRIPSKSVLVEPSTVLN
Ga0208696_11295531	3300027696	Peatlands Soil	LTQREDTMAVAVRDDGKGIGEAIVDLRPDTVGVGIGGMKQRVKEFGGELRLSNTHPGTLVEVMIPCSSLLREPSAVLDGYA
Ga0209447_101007322	3300027701	Bog Forest Soil	RVAFGKKIAEQQPDSVGVGIGGMKQRAKEFGGELRLTNAHPGTLVELLIPCSSVMREPITVLDGVPEIRMQG
Ga0208989_100047102	3300027738	Forest Soil	VWITLNQRDGQIIAAVLDDGKGIDKKIEELRPESVGVGIGGMKQRAKEFGGELRLANASPGTLLELRIPCSSALREPSPVLDGCV
Ga0209908_100077182	3300027745	Thawing Permafrost	VVSVLDDGKGIDQRVADLRPESIGVGIGGMKQRAKEFGGELRLANADPGTLLELVIPSALALREATAILNGCSV
Ga0209448_102366252	3300027783	Bog Forest Soil	DGKGVDKRIAELQPDSVGVGIGGMKQRAREFGGELRLTNANPGTLVELVIPRRSVLRDPSAALTA
Ga0209039_101435901	3300027825	Bog Forest Soil	ISLHQRDGSILVSVLDDGKGIDERIAELRPEKVGVGIGGMKQRALEFGGELRLTNAVPGTLLELMIPSTSVLREPSRATVMNGCT
Ga0209039_102936212	3300027825	Bog Forest Soil	KVWITLSHTNGMIDVSVKDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNVPPGTVVELSIPCRSISRDSSAVLGVCASD
Ga0209773_100931701	3300027829	Bog Forest Soil	GSIVVSVRDDGKGIGDRVVEMRADSVGVGIGGMKQRAKEFGGELRLKNANPGTLVELTLPRSGALRESREVLQS
Ga0209275_105386861	3300027884	Soil	IQKDGSIFVSVLDDGKGIDKKIVDLRPESVGVGIGGMKQRAKEFGGELRLTNADPGTLLELMIPSSSALRESSAVLNECT
Ga0209380_106611872	3300027889	Soil	ITLTQKEGIIVVAVRDNGKGIGREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNAHPGTLVELMIPCSSVLRESSSVMDDVREAVPE
Ga0209698_103690532	3300027911	Watersheds	DEGKGSDERIAELRPEKVGVGIGGMKQRAREFGGELRLRNADPGTVLELMLPSTSVLRESSAVFDGCA
Ga0209698_112646781	3300027911	Watersheds	GKGIGQNIAELRPESVGVGIGGMRQRAKEFGGELRLVNAQPGTLVELRIPYTSVVREPAGVTGS
Ga0265356_10191012	3300028017	Rhizosphere	TLSHTNGMIEVSVKDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELSIPSRSVSRDSIPVADVYASD
Ga0302156_104502072	3300028748	Bog	EGIIVVAVRDNGKGIRREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0302265_10919572	3300028859	Bog	LITVSVLDDGKGIDQRTAELSPDKLGVGIGGMKQRAKEFGGELRLSNNEPGTLLELMIPAKSLLCEPSAVSV
Ga0302230_101313992	3300028871	Palsa	VRDDGKGIGKKIAEQQPDSVGVGIGGMKQRAKEFGGELRLTNTHPGTLVELMVPCRSVLREPAAILGGCA
Ga0302155_100800311	3300028874	Bog	RDDGKGIGQRVAELQPDSVGVGIGGMKQRAKEFGGELRLTNTQPGTLVELLIPTRDVLREAVLS
Ga0311368_103476663	3300029882	Palsa	VLDDGKGIDERIAELRPEKVGVGIGGMKQRALEFGGELRLSNANPGTLLELIIPSTSVLGETNAVLNGCV
Ga0311329_101836942	3300029907	Bog	GIIVVAVRDNGKGIRREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0311359_100552486	3300029914	Bog	REIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0311352_103566891	3300029944	Palsa	QKVSIRLTQSNGLITVAVRDNGKGISKRVTEQQPDSVGVGIGGMKQRAREFGGELRLTNAQPGTLVELLIPSSSVLKDAHSMLDGCR
Ga0311371_113251121	3300029951	Palsa	VLDDGKGIDERIAELRPDRVGVGIGGMKQRAREFGGELRLKNADPGTLLELMIPSNSVLRESNSILNGVT
Ga0311371_123286752	3300029951	Palsa	SIRLTQSNGLITVAVRDNGKGISKRVTEQQPDSVGVGIGGMKQRAREFGGELRLTNAQPGTLVELLIPSSSVLKDAHSMLDGCR
Ga0302150_103329372	3300029956	Bog	DNGKGIRREIEELQPDSVGVGIGGMKQRAKEFGGELRLSNANPGTLVELTIPCSSVLRDSSSVMDDVREAVPE
Ga0302178_104693981	3300030013	Palsa	ITLTQREGTIVVAVRDDGKGIGKKIAEQQPDSVGVGIGGMKQRAKEFGGELRLTNTHPGTLVELMVPCRSVLREPAAILGGCA
Ga0302176_101557641	3300030057	Palsa	GKGIDERIAELRPEKVGVGIGGMKQRALEFGGELRLSNANPGTLLELIIPSTSVLGETNAVLNGCV
Ga0302192_102701812	3300030507	Bog	LDDGKGIDQRVAELRPEKMGVGIGGMRQRAKEFGGELRLTNNQPGTLLEIMIPTNAALREPTPVTA
Ga0311355_108241771	3300030580	Palsa	VRDDGKGIGKRIAEMQPDSVGVGIGGMKQRASEFGGELRLTNMNPGTLVELMIPCSLVVRESSAVSHRSQKFVDAALQ
Ga0073994_108585541	3300030991	Soil	AKIAELRPEKVGVGIGGMKQRAKEFGGELRLTNVDQGTLLELTIPSNSVVREPAAVLGGD
Ga0265771_10090812	3300031010	Soil	VIVVSVLDDGKGIDKKIAELRPDSVGVGIGGMKQRAREFGGELRLTNADPGTLLELTIPQSLALREASAVLNECT
Ga0138301_18388911	3300031022	Soil	VAVRDDGKGISKKIVDLEPDSVGVGIGGMKQRAKEFGGELRLTNAEPGTLVELTIPYSSVLREPALSSVDARRSD
Ga0302180_101662643	3300031028	Palsa	GRRIAELQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTLVELIIPCTAVLRVPATVPLAVLDGCA
Ga0170824_1185897311	3300031231	Forest Soil	PVLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPVTLLELVIPAHSLVREPNPALEQVRMS
Ga0310686_1040516721	3300031708	Soil	KISELRPENVGVGIGGMKQRAKEFGGHIRLTNADPGTLLELMIPCSTALRESSTALSAI
Ga0307474_112317031	3300031718	Hardwood Forest Soil	KIVNLEPDSVGVGIGGMKQRAKEFGGELRLINANPGTLVELTIPYGSSLRETSSVLDGCSAN
Ga0307477_109381491	3300031753	Hardwood Forest Soil	VAVRDNGKGIGRKIAELQPDSVGVGIGGMKQRAKEFGGELRLSNVHPGTLVELIIPSNSVLREPSAVLDGIA
Ga0307478_107589611	3300031823	Hardwood Forest Soil	GAHKVGINLTQKNGVIVVAVRDDGKGIGQKIVNLEPDSVGVGIGGMKQRAKEFGGELRLINANPGTLVELTIPYGSSLRETSSVLDGCSAN
Ga0307479_112241911	3300031962	Hardwood Forest Soil	WINLNQRNGQISVSVLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLGREPHPVLEQVRMSQ
Ga0307479_120774561	3300031962	Hardwood Forest Soil	VLDDGKGIDQKIADLRPESVGVGIGGMKQRAKEFGGELRLSNAAPGTLLELVIPAHSLGREPHPVLEQVRMSQ
Ga0348332_126470861	3300032515	Plant Litter	ISLTQGNGTIVVAVRDDGKGIGKRIADLQPDSVGVGIGGMKQRAKEFGGELRLTNAQPGTIVELMVPCNSVLREPNVVLDGCA
Ga0335077_102517254	3300033158	Soil	VVAKVRDDGRGIAENVAEQQPGSIGIGIGGMSQRAKEFGGELRLARAHPGTLVEILIPCNLLQETRASA
Ga0371488_0081610_13_246	3300033983	Peat Soil	MIEVSVKDDGRGIGKKIAEMRPDSVGVGIGGMKQRARELGGELRLRNAPPGTVVELTIPCHSVSRDSSPVLNVCASD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080352

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences