Metagenome / Metatranscriptome Family F080325

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080325
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	75 residues
Representative Sequence	MRNLSIFAALLFCALAANSYAQNPVIWTAADSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTV
Number of Associated Samples	91
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	91.30 %
% of genes from short scaffolds (< 2000 bps)	79.13 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.696 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.956 % of family members)
Environment Ontology (ENVO)	Unclassified (40.870 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.62% β-sheet: 21.65% Coil/Unstructured: 57.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF11008	DUF2846	8.70
PF14014	DUF4230	3.48
PF00248	Aldo_ket_red	2.61
PF01797	Y1_Tnp	2.61
PF02627	CMD	1.74
PF05016	ParE_toxin	1.74
PF01850	PIN	1.74
PF01872	RibD_C	1.74
PF13282	DUF4070	0.87
PF07883	Cupin_2	0.87
PF10387	DUF2442	0.87
PF01965	DJ-1_PfpI	0.87
PF07995	GSDH	0.87
PF01590	GAF	0.87
PF08031	BBE	0.87
PF13449	Phytase-like	0.87
PF00589	Phage_integrase	0.87
PF04264	YceI	0.87
PF07238	PilZ	0.87
PF13594	Obsolete Pfam Family	0.87
PF03544	TonB_C	0.87
PF03781	FGE-sulfatase	0.87
PF03551	PadR	0.87
PF05368	NmrA	0.87
PF01144	CoA_trans	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	2.61
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.74
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.74
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.74
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.74
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.87
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.87
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.87
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.87
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.87
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.87
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.87
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.87
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.70 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.70 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.70 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.91 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.30 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	11.30 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.17 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11.30 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.17 %
Unclassified	root	N/A	11.30 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	6.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.17 %
Unclassified	root	N/A	11.30 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	6.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100195010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1915	Open in IMG/M
3300002245\|JGIcombinedJ26739_100871512	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300003505\|JGIcombinedJ51221_10065498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300004091\|Ga0062387_101063535	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300004091\|Ga0062387_101369416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300004631\|Ga0058899_10154066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300004635\|Ga0062388_102721087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005542\|Ga0070732_10628286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300005542\|Ga0070732_10795264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300005575\|Ga0066702_10666111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005602\|Ga0070762_10178318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1288	Open in IMG/M
3300005602\|Ga0070762_10297846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300005610\|Ga0070763_10682350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300005712\|Ga0070764_10973626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005764\|Ga0066903_102720453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300005764\|Ga0066903_104031076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300006052\|Ga0075029_100884408	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300006175\|Ga0070712_100288963	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300007788\|Ga0099795_10514898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009143\|Ga0099792_10656993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300009162\|Ga0075423_12393968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300009521\|Ga0116222_1070586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1509	Open in IMG/M
3300009525\|Ga0116220_10056290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1643	Open in IMG/M
3300009839\|Ga0116223_10362559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300010159\|Ga0099796_10443476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300010379\|Ga0136449_100217814	All Organisms → cellular organisms → Bacteria	3598	Open in IMG/M
3300010379\|Ga0136449_100293453	All Organisms → cellular organisms → Bacteria	2972	Open in IMG/M
3300011269\|Ga0137392_10143419	All Organisms → cellular organisms → Bacteria → Acidobacteria	1922	Open in IMG/M
3300011269\|Ga0137392_11172677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012189\|Ga0137388_10005704	All Organisms → cellular organisms → Bacteria → Acidobacteria	8343	Open in IMG/M
3300012202\|Ga0137363_10742941	All Organisms → cellular organisms → Bacteria → Acidobacteria	831	Open in IMG/M
3300012203\|Ga0137399_11259953	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300012362\|Ga0137361_10390666	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1278	Open in IMG/M
3300012363\|Ga0137390_10572724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1099	Open in IMG/M
3300012683\|Ga0137398_10429698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	902	Open in IMG/M
3300012918\|Ga0137396_10183865	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300012923\|Ga0137359_10869754	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300014969\|Ga0157376_12708863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300017936\|Ga0187821_10216500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300017994\|Ga0187822_10176874	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300019888\|Ga0193751_1104562	All Organisms → cellular organisms → Bacteria → Acidobacteria	1083	Open in IMG/M
3300020579\|Ga0210407_10281812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300020580\|Ga0210403_10046435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3474	Open in IMG/M
3300020580\|Ga0210403_10454155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300020581\|Ga0210399_10623438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300021088\|Ga0210404_10255937	Not Available	953	Open in IMG/M
3300021168\|Ga0210406_11332833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300021170\|Ga0210400_10023789	All Organisms → cellular organisms → Bacteria → Acidobacteria	4764	Open in IMG/M
3300021170\|Ga0210400_10237054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1489	Open in IMG/M
3300021181\|Ga0210388_11177552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300021401\|Ga0210393_11163809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300021401\|Ga0210393_11588317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300021402\|Ga0210385_10204499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1437	Open in IMG/M
3300021403\|Ga0210397_10481153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300021403\|Ga0210397_10767866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300021404\|Ga0210389_10171823	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300021405\|Ga0210387_10059023	All Organisms → cellular organisms → Bacteria	3109	Open in IMG/M
3300021406\|Ga0210386_10002897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14515	Open in IMG/M
3300021407\|Ga0210383_11254078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300021420\|Ga0210394_10935726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300021432\|Ga0210384_10080167	All Organisms → cellular organisms → Bacteria	2935	Open in IMG/M
3300021478\|Ga0210402_10363513	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300021478\|Ga0210402_10587397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300021478\|Ga0210402_11845434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300022557\|Ga0212123_10010849	All Organisms → cellular organisms → Bacteria	12693	Open in IMG/M
3300023056\|Ga0233357_1011646	Not Available	971	Open in IMG/M
3300024290\|Ga0247667_1046099	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300025494\|Ga0207928_1034453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300026281\|Ga0209863_10082260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300026309\|Ga0209055_1149796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300026514\|Ga0257168_1138158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027109\|Ga0208603_1057882	Not Available	585	Open in IMG/M
3300027173\|Ga0208097_1017540	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300027439\|Ga0209332_1076463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300027605\|Ga0209329_1144878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300027629\|Ga0209422_1001024	All Organisms → cellular organisms → Bacteria	6722	Open in IMG/M
3300027674\|Ga0209118_1112963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300027867\|Ga0209167_10418791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300027903\|Ga0209488_10788467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300027905\|Ga0209415_10268911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1509	Open in IMG/M
3300027908\|Ga0209006_11241553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300027986\|Ga0209168_10010456	All Organisms → cellular organisms → Bacteria	5577	Open in IMG/M
3300027986\|Ga0209168_10428783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300028906\|Ga0308309_10720473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	867	Open in IMG/M
3300030886\|Ga0265772_106443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300031057\|Ga0170834_108888086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	717	Open in IMG/M
3300031241\|Ga0265325_10307840	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300031708\|Ga0310686_102821294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031715\|Ga0307476_10010306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5821	Open in IMG/M
3300031715\|Ga0307476_10335601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300031715\|Ga0307476_10402028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300031754\|Ga0307475_10599974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300031754\|Ga0307475_11236357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300031754\|Ga0307475_11393765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300031823\|Ga0307478_11206274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300031962\|Ga0307479_10143908	All Organisms → cellular organisms → Bacteria → Acidobacteria	2336	Open in IMG/M
3300031962\|Ga0307479_10696885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300031962\|Ga0307479_10896029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300031962\|Ga0307479_12141088	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300032160\|Ga0311301_12600899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300032174\|Ga0307470_11121689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300032180\|Ga0307471_101211031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	919	Open in IMG/M
3300032180\|Ga0307471_101238286	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300032828\|Ga0335080_10337067	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300032954\|Ga0335083_10036743	All Organisms → cellular organisms → Bacteria	5372	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.65%
Host-Associated	Host-Associated	4.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.57%
Aquatic	Environmental → Aquatic	6.09%
Plants	Host-Associated → Plants	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.57%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%
Sediment	Environmental → Aquatic → Sediment	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.57%
Loam	Environmental → Terrestrial → Soil → Loam	17.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	40.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	12.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.74%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030886	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1001950102	3300002245	Forest Soil	MEPANTSSMRNLSIFAALLFCALAASLYAQNPVVWIAANSETIRLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEW
JGIcombinedJ26739_1008715122	3300002245	Forest Soil	MRNLSIFAALLFSAFAANSYAQDRAVDWIAADAETIPLEPASLHAARVYRPAVGGGD
JGIcombinedJ51221_100654981	3300003505	Forest Soil	MWKHSIFAVLLFCAFAATSRSQDRVIDWIAADSEMIPLEPASLHAARVYHPAAGGGDMHVQIDSRYPVTVAMAWADEWN
Ga0062387_1010635351	3300004091	Bog Forest Soil	MGHANTSSMRNSSIFAALLFCALTANSYAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRY
Ga0062387_1013694162	3300004091	Bog Forest Soil	MRNFSIFAALLFCAFAANSSAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTV
Ga0058899_101540661	3300004631	Forest Soil	MDPANTFSMRSLSVFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGGDIHVQIDSRYPVT
Ga0062388_1027210872	3300004635	Bog Forest Soil	MGHANTSSMRNSSIFAALLFCALTANSYAQVYWSSADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRY
Ga0070732_106282862	3300005542	Surface Soil	MRNFSIFATLLFCAFAANSYAQVYWSAADSQTIALEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVAMAWADEWN
Ga0070732_107952642	3300005542	Surface Soil	MRNFSIFATLLFCAFTVNSYAQDRTIWTAADSETIPLEPASIHGARVYHPAVGGGGMHVQIDSRYPVTVAMAWA
Ga0066702_106661112	3300005575	Soil	MRKLSVFAVLLLCALAATSRAQNRANNWIAADSETIPLEPASLHGGRVYHPAAGGGDMH
Ga0070762_101783182	3300005602	Soil	MDPANTFSVRSLSIFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGGDIHVQIDSRYPVTVAMAWADEWNAAVLHPGAP
Ga0070762_102978464	3300005602	Soil	MWKHSIFAVLFCAFAATSRSQDRVIDWIAADSERIPLEPASLHAGRVYHPAAGGGDMHVQIDSRYPVTVAMAWADEWNAAMQHPE
Ga0070763_106823502	3300005610	Soil	MNPANTSSMRNFSIFSTLLLCALAANSYAQDRTIWTAADSETIPLEPASLHAARVYRAAVGGGGMHVHIDSRYPVTVAMAWADEWNAAMQHP
Ga0070764_109736261	3300005712	Soil	MDAANTFSMRSLSIFATLLVGVLAFAANLYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGGDIHVQIDSRYPVTVAMAWADEWNAAVLHPGAP
Ga0066903_1027204533	3300005764	Tropical Forest Soil	MKNLSIFFGLLVCAFATVSLAQDNRVFDWTPANSETIPLEPASLHAGRVYHPAAGGGNMHVQIDSRYPVTVAMAWADEWNAAMQ
Ga0066903_1040310761	3300005764	Tropical Forest Soil	MRNFSIFAAVLFCAFVANSYAQNRVVWTPANSETIPLEPASIHGGRVYSPAVGGGDMRVQIESKYPVTVAMAWADEWNAAMQPGARPNFS
Ga0075029_1008844081	3300006052	Watersheds	MRNSSIFATVLLCACAANSYAQDPAFYWRAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRY
Ga0070712_1002889634	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLRIFATLLFCALAANSHAQNTVVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSK
Ga0099795_105148981	3300007788	Vadose Zone Soil	MRNLSIFATLLFCALAANSNAQNQIVWTAANSENVPLEPASLHAGRVYHPAVGGGDMHVQ
Ga0099792_106569931	3300009143	Vadose Zone Soil	MRNLSIFATLLFCALAANSYAQNQIVWTAANSENVPLEPASLHAGRVYHPAVGGGDMHVQIDS
Ga0075423_123939681	3300009162	Populus Rhizosphere	MRNSAIIAAVLCTLATLTFGQNHVFDWTPANSETIPLEPASLHAGRIYYPAVGGGDMHVQIDSRYSVTVAMAWADEWNAAMQHPQAA
Ga0116222_10705861	3300009521	Peatlands Soil	MRNFSIFAALLFCALAANSYAANSVIWIAANSETIPLEPASLHAGQVYYPAVGGGDIHVQIDSRYPVTVAMTWADEWNAAMRSPG
Ga0116220_100562901	3300009525	Peatlands Soil	MAATNTSSMRNFSIFAALLFCALAANSYAANSVIWIAANSETIPLEPASLHAGQVYYPAVGGGDIHVQIDSRYPVTVAMTWADEWNAAMRS
Ga0116223_103625591	3300009839	Peatlands Soil	MAATNTSSMRNFSIFAALLFCALAANSYAANSVIWIAANSETIPLEPASLHAGQVYYPAVGGGDIHVQIDSRYPVTVA
Ga0099796_104434761	3300010159	Vadose Zone Soil	MRNLSIFATLLFCALAANSYAQNQLVWTAANGETILLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMRPGAP
Ga0136449_1002178145	3300010379	Peatlands Soil	MRNFSIFATLLFCAFAANSYAQDRTIWTAADSETILLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVAMAWADEWNAAMQHPGAPANFS
Ga0136449_1002934535	3300010379	Peatlands Soil	MRNFSIFATLLFCALVANSYAQDRTIWTAADSETIPLEPASLHAARVYRPAVGGGGMHVQIDSRYPVTVAMAWADEWNAAMQHPGAPANFS
Ga0150983_149064632	3300011120	Forest Soil	MDAANTFSMRSLSIFATLLVGVLAFAANLYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGG
Ga0137392_101434193	3300011269	Vadose Zone Soil	MRNLSIFATLLFCALAANSYAQNQLVWAAANSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMRPG
Ga0137392_111726771	3300011269	Vadose Zone Soil	MRNLSIFATLLFCALAANSHAQNPVVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMRPGAP
Ga0137388_1000570412	3300012189	Vadose Zone Soil	MRNLSIFAALLFCALAANSYTQNPVIWTAADSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTVAMAWADEWNA
Ga0137363_107429411	3300012202	Vadose Zone Soil	MRNLSIFAVLLFCALAANSYAQNQLVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAM
Ga0137399_112599532	3300012203	Vadose Zone Soil	MRNLLIFAALLFCALAANSYAQNQLVWTAANSETIPLEPASLHAGRVYSPAVGGGDM
Ga0137361_103906662	3300012362	Vadose Zone Soil	MDPANTSSVRNLSIFATLLFCALAANSYAQNQIVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVA
Ga0137390_105727241	3300012363	Vadose Zone Soil	MRNLSIFATLLFCALAANSYAQNQLVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMRPGAPANF
Ga0137398_104296981	3300012683	Vadose Zone Soil	MKNLSILAAVLFCALAANSHAQNPVVWTAANSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTVAMTWADEWNAAMQPGSPAHFS
Ga0137396_101838654	3300012918	Vadose Zone Soil	MRNLSIFATLLFCALAANSYAQNQIVWPAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVA
Ga0137359_108697541	3300012923	Vadose Zone Soil	LAANSYTQNQLVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAM
Ga0157376_127088631	3300014969	Miscanthus Rhizosphere	MRNLSTFVLILCAFAANSYAQNRVYWSPANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMTWADEWNAAMQHPQA
Ga0187821_102165001	3300017936	Freshwater Sediment	MRNFSIFAAVLFCAFVANSYAQNRVVWTPANSETIPLEPASIHSGRVYSPAVGGGDMHVQIESKYPVTVAMAWADEWN
Ga0187822_101768741	3300017994	Freshwater Sediment	MRNFSFLAALLVCAFAANSYAQNRVYWTAANSETIPLEPASLHAGRVYSPAVGGGDMHV
Ga0193751_11045622	3300019888	Soil	MDPANTPQMRNFSIFATLLFCALAANSYAQNPVIWTAADSETIPLEPASLHAGRVYHPAV
Ga0210407_102818122	3300020579	Soil	MRNFSIFATLLFCAFAANSCAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVAMAWADEWNAAMQPGAPAN
Ga0210403_100464356	3300020580	Soil	MDPANTSRMRNFSIFATLLFCAFAANSCAQVYWSAADGETIPLEAASLHAGRVYHPAVGGGGMHVQIDSR
Ga0210403_104541551	3300020580	Soil	MDPANTSRMRNFSIFATLLFCALAANSYAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVAMAWADEWNAAMQNPGASAN
Ga0210399_106234382	3300020581	Soil	MRNFSIFATLLFCALAANSYAQDGTVWRAADSETIPLEPASLHGARVYRAAVGGGGIHVQINSGYPVTVAMAWA
Ga0210404_102559372	3300021088	Soil	MRPANTSSMRKLSLFATLLFCALVANSYAQNPAFYWRAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVA
Ga0210406_113328331	3300021168	Soil	MAATNTSSVRNLSIFATLLFCGLAANSYAQDRNLWIAANSETIPLEPASLHAGQIYYPAVGGGDMHVKIDS
Ga0210400_100237896	3300021170	Soil	MRNLSIFATLLFCALAANSHAQTQIIWTPANSENILLEPASLHAGRVYTPAVGGGDMHVQIDSRYPVT
Ga0210400_102370541	3300021170	Soil	MRNLSIFVALLICVFAANSYAQNRVYWTAANSEKIPLEPASLHAGHVYYPAVGGGDMHVQIDSRYPVTVALAWADEWN
Ga0210388_111775521	3300021181	Soil	MGHPILHSMGNFSIIATLLFCVLAADSHAQNPVIWTAANGETILLEPAGLHAGRVYSPAVGGGDMHVQINSRYPVT
Ga0210388_112172121	3300021181	Soil	MAATNTSGMRNFSIFAALLFSTLAANLHAANSVIWIAANSETIPLEPASLHAGQVYYP
Ga0210393_111638091	3300021401	Soil	MRKLSIFATLLGSVLALAANTYAQNQIIWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMQ
Ga0210393_115883171	3300021401	Soil	MAATNTSSVRNLSIFATLLFCALAANSYAQDRNLWIAANSETIPLEPASLHAGQIYYPAVGGGDIHVKIDSRYPVTVAMTWADEWNAAMRSPG
Ga0210385_102044991	3300021402	Soil	MRKLSIFATLLGSVLALAANTYAQNQIIWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWN
Ga0210397_104811531	3300021403	Soil	MRNFFIFATLLFCALAANSYAQNPVIWTAADSETIPLEPASLHGGRIYHPAVGGGGM
Ga0210397_107678661	3300021403	Soil	MRNLLIFTALLVCAFAANSYAQSGVYWTAANSETILLEPASLHAGRVYSPAVGGGDMHVQIDSKY
Ga0210389_101718233	3300021404	Soil	MRNLSIFATLLFCALAANSHAQNPVIWTAADSATIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMRSPGAPADFSF
Ga0210387_100590233	3300021405	Soil	MAATNTSGMRNFSIFAALLFSTLAANLHAANSVIWIAANSETIPLEPASLHAGQVYYPAVGGGDMHVQIDSRYPVTVAMTWADEWNAAMRSP
Ga0210386_1000289713	3300021406	Soil	MRPANTSSMRKLSLFATLLFCALVANSYAQNPAFYWRAADSETIPLEPASLHAGRVYHPAVGGGGMHVQI
Ga0210383_112540782	3300021407	Soil	MDPANTSRMRNFSIFATLLFCAFAANSCAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGMHVQI
Ga0210394_109357261	3300021420	Soil	MRNFSIFATLLFCAFAANSCAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGVHVQ
Ga0210384_100801671	3300021432	Soil	MRNLSIFATLLFCASAANSYAQNQIVWTAADSATIPLEPASLHAGRVYHPAIGGGDMHVQIDSRYPVTVAMAWADEWNAV
Ga0210390_105246121	3300021474	Soil	MDPANTFSMRSLSVFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGGDIHVQ
Ga0210398_110899451	3300021477	Soil	MDPANTFSMRSLSVFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVY
Ga0210398_115097671	3300021477	Soil	MDPANNFSMRNLLIFAALLLCALAANSDAQNGVVWIAANSETVLLEPASLHAGRVY
Ga0210402_103635133	3300021478	Soil	MRNLFIFAALLVCALAAPLSAQNRIYWSAANSETIPLEPASLHAGRVYHPAVGGGAMHVP
Ga0210402_105873972	3300021478	Soil	MRNFSIFAALLFCALAVNSSAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVAMTWADEWNAALQP
Ga0210402_118454341	3300021478	Soil	MRKLSIFGALLVCAFAANLYAQNRIYWSAANSETIPLEPASLHAGRVYRPAVGGGDMHVQIDSRYPVTVAM
Ga0212123_1001084913	3300022557	Iron-Sulfur Acid Spring	MRNLSIFATLLFCALAANSYAQNPVVWIAANSEIIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTVAM
Ga0242657_12232271	3300022722	Soil	MDPANTFSVRSLSIFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVYYPAV
Ga0224570_1033701	3300022730	Rhizosphere	MDPANTFSMRSLSVFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGGDIH
Ga0233357_10116462	3300023056	Soil	MRNLSIFAALLFCALTANSHAQNQIVWTPAISETIPLEPASLHAARVYHPAVGGG
Ga0224572_10207732	3300024225	Rhizosphere	MDPANTFSMRSLSVFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGG
Ga0247667_10460991	3300024290	Soil	MRKLSIFAVLLFCALAATSYAQNPAITWIAADNETIPLEPASLHAGRVYRPAVGGGDMHVQIDSRYPVTVA
Ga0207928_10344532	3300025494	Arctic Peat Soil	VDPANTSSMSKLSIFATLLFCALAANSYAQNRVYWSAANSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTVAMTWADE
Ga0209863_100822601	3300026281	Prmafrost Soil	MRNFAIFTALFCALAALSFGQDRVFNWTPANSETIPLEPASLHAGRVYHPAAGGGNMHIAIESRFPVTLAMTWADEWDNA
Ga0209055_11497962	3300026309	Soil	MRNLSIFATLLFCALAANSYAQNQIVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMRP
Ga0257168_11381581	3300026514	Soil	MHPANTCSMRNLSIFATLLFCALAANSYAQNQLVWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYP
Ga0208603_10578821	3300027109	Forest Soil	MWKHSIFAVLLFCAFAATSRSQDRVIDWIAADSEMIPLEPASLHAARVYHP
Ga0208097_10175401	3300027173	Forest Soil	MRNFSIFATLLFCALAANSYAQVYWSAADSETIPLEPASLHAGRVYHPAVGGGGMHVQID
Ga0209332_10764632	3300027439	Forest Soil	MRNLSIFATLLFCAFAANSYAQNPVIWTAADSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTVAMA
Ga0209329_11448781	3300027605	Forest Soil	MRNLSIFAALLFCALAANSYAQNPVIWTAADSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTV
Ga0209422_10010245	3300027629	Forest Soil	MDPANTSGMRNFSILAMLLFCALAANSYAQNPVIWTAADSETIPLEPASLHAGRVYSPAVGGGDMHVQINSRYPVTVAMAWADEWNAAM
Ga0209118_11129632	3300027674	Forest Soil	MDPANTSRMRNLSIFATLLFCALAANSYAQNPVIWTAADSETIPLEPASLHAGRVYHPAVGGG
Ga0209517_103390491	3300027854	Peatlands Soil	MKNFSIFAALLFCAFAANLYAQDRVFWTAANNETIPLEPASIHAGRIYYPAVGG
Ga0209167_104187911	3300027867	Surface Soil	MRNFFIFATLLFCALAANSYAQNPVIWTAADSETIPLEPASLHGGRIYHPAVGGGGMHVQ
Ga0209488_107884672	3300027903	Vadose Zone Soil	MDPANTSRMRNLSIFATLLFCALAANSYAQNQIVWTAANSENVPLEPASLHAGRVYHPAVGGGDMHVQIDS
Ga0209415_102689111	3300027905	Peatlands Soil	MAATNTSSMRNFSIFAALLFCALAANSYAANSVIWIAANSETIPLEPASLHAGQVYYPAVGGGDIHVQIDSRYPVTVAMTWADEWNAAMRSPGA
Ga0209006_112415531	3300027908	Forest Soil	MDRANTSSMRNLSIFATLLFCALAANSHAQNPVIWTAADSATIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAM
Ga0209168_100104565	3300027986	Surface Soil	MRNFSIFATLLFCAFAANSYAQNPGFYWRAADSETIPLEPASLHPGRVYHPAVGGGGMHVQIDSRYPVTVAMAWADEWNAAMQHPEVPPN
Ga0209168_104287831	3300027986	Surface Soil	MRKIRNLTAIVAALACALSATLYAQNRVYWSAANSETIPLEPASLHAGRVYHPAVGGGDMHVQIDSRYPVTVAMTWADEWNAAMQ
Ga0308309_107204731	3300028906	Soil	MDPANNFSMRNLLIFAALLFCALAANSDAQNGVVWIAANSETVLLEPASLHAGRVYHPAVGGGDMHAQIGSRYPV
Ga0265772_1064431	3300030886	Soil	MDPANTFSMRSLSVFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGRVYYPAVGGGDIHVQIDSRYPVTVAM
Ga0265740_10293471	3300030940	Soil	MDPANTFSMRSLSVFATLLVGVLAFAANSYAENGVVWIAANGETILLEPASLHAGR
Ga0170834_1088880862	3300031057	Forest Soil	MDPANTFRMRKLSIFATLLVCVFALAANSYAQNPVVWTAANSEVIPLEPASIHAGRVYRPAVGGGDMHVQIDS
Ga0265325_103078402	3300031241	Rhizosphere	MRSFLIFAALLVCAFAANSSAQNRVYWTAASSETILLEPAGLRAGRVYSPAIGGGDMHVQIDSKYPVTVAMAWADEWNAAMQPWARPN
Ga0310686_1028212941	3300031708	Soil	MHPANTSNMRNFSIFAALLFSTLAANLHAANSVIWIAANSETIPLEPASLHAGQVYYPAVGGGDIHVQIDSRYAVTVAMTWADEWNAAM
Ga0307476_100103061	3300031715	Hardwood Forest Soil	MAATNTSSMRNFSIFAALLFSTLAANLHAANPVIWIAANSETIPLEPASLHAGQVYYPAVGGGDMHVQIDSRYPVTVAMTWADEWNAAMRSPGAPA
Ga0307476_103356013	3300031715	Hardwood Forest Soil	MRKLSIFGAVLVCAFAASLYAQDRVYWSAADSETIPLEPASLHAGRVYHPAVGGGDMH
Ga0307476_104020284	3300031715	Hardwood Forest Soil	MRNLSIFATLLVCVFALAASSYAQNPVVWTAADSATIPLEPASLHAGRVYTPAVGGGDMHVQIDSRYP
Ga0307475_105999742	3300031754	Hardwood Forest Soil	MRPANTSSMRKLSLFATLLFCALVANSYAQNPAFYWRAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVAMAWADEWNATM
Ga0307475_112363571	3300031754	Hardwood Forest Soil	MRNLSIFATLLFCAFAANSHAQNPVVWTAADSETIPLEPASLHAGRVYHPAVGGGGMHVQIDS
Ga0307475_113937651	3300031754	Hardwood Forest Soil	MDPANTSSMRNLSIFAALLFCVLAANLHAQNQIVWTPANSENIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWNAAMRPGAAAH
Ga0307478_112062741	3300031823	Hardwood Forest Soil	MRNLSILATLLVCVLALAASSHAQNPVVWTAADSATIPLEPASLHAGRVYTPAVGGGDMHVQIDSRYPVTVAMAWADEWNAA
Ga0307479_101439081	3300031962	Hardwood Forest Soil	MDPANTSRMRNLSIFATLLFCALAANSHAQNPVIWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAM
Ga0307479_106968851	3300031962	Hardwood Forest Soil	MYPANTSSMRNLSIFATLLFCALAANSHAQNTLIWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQIDSRYP
Ga0307479_108960291	3300031962	Hardwood Forest Soil	MRNLSIFAKLLFCALAANSHAQNTLIWTAADSATILLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVTVAMAWADEWN
Ga0307479_121410882	3300031962	Hardwood Forest Soil	MDPANTSSMRNFSIFATLLLCAFAANSYAQNPLVWTAADSETIPLEPAGVHAGRVYYPAVGGGDM
Ga0311301_126008991	3300032160	Peatlands Soil	MRNFSIFATLLFCAFAANSYAQDRTIWTAADSETILLEPASLHAGRVYHPAVGGGGMHVQIDSRYPVTVAMAWADEWNAAMQHPGAP
Ga0307470_111216891	3300032174	Hardwood Forest Soil	MDPANTSSMRNLSIFATLLFCVLAANSHAQNPVIWTAANSENILLEPASLHAGRVYSPAVGGGDMHVQIDSRYPVT
Ga0307471_1012110312	3300032180	Hardwood Forest Soil	MGPANTSGMRNLSIFAALLFCALAANSYAQNPAFYWSPANSATIPLEPASLHAGRVYYPAVGGGDMHVQ
Ga0307471_1012382862	3300032180	Hardwood Forest Soil	MHPANTSSMRNLSIFATLLFCALAANSHAQNTLIWTAANSETIPLEPASLHAGRVYSPAVGGGDMHVQ
Ga0335080_103370675	3300032828	Soil	MRNFFIFATLLFCAFAANSYAQDHVFYWRAADSETIPLEPASLHAGRVYHPAVGGG
Ga0335083_100367437	3300032954	Soil	MRKLPIFAVLLFCAFAATSYAQNPALTWIAADSETIPLEPASLHGGRVYRPAVGGGDMHVQIDSRYPVT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080325

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences