NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080314

Metagenome / Metatranscriptome Family F080314

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080314
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 92 residues
Representative Sequence SVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Number of Associated Samples 108
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 88.70 %
% of genes from short scaffolds (< 2000 bps) 88.70 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.435 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.652 % of family members)
Environment Ontology (ENVO) Unclassified
(29.565 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.957 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134
1F62_04724970
2F62_01729170
3FA3_11147260
4N55_05790200
5FE1_06445070
6FE2_07933060
7JGI10214J12806_102908022
8Ga0066690_108988581
9Ga0066678_103967962
10Ga0066678_106305552
11Ga0066676_100685085
12Ga0070683_1022943171
13Ga0070689_1007094621
14Ga0070659_1015083231
15Ga0070714_1023720511
16Ga0070710_101564534
17Ga0066682_104577161
18Ga0070662_1015115822
19Ga0070707_1018920761
20Ga0066661_105110201
21Ga0066700_107025371
22Ga0066708_108405042
23Ga0066691_108966011
24Ga0066905_1009994192
25Ga0066903_1008363551
26Ga0066903_1057683722
27Ga0070712_1005420051
28Ga0066665_105006162
29Ga0066665_113887242
30Ga0066659_112250031
31Ga0066659_114856231
32Ga0066660_105964011
33Ga0075428_1026857091
34Ga0075425_1008722761
35Ga0075434_1012543262
36Ga0075435_1005447331
37Ga0099791_101081481
38Ga0075418_130909201
39Ga0111538_139589171
40Ga0075423_125010691
41Ga0105241_112521931
42Ga0105242_122614761
43Ga0126315_108834101
44Ga0126308_110961552
45Ga0126314_112939991
46Ga0134082_101019292
47Ga0134109_101985742
48Ga0134084_100677561
49Ga0134064_101118361
50Ga0134062_102162481
51Ga0134124_120067022
52Ga0137364_104869181
53Ga0137365_112855171
54Ga0137376_111407431
55Ga0137377_105501312
56Ga0137370_108734792
57Ga0137371_105874393
58Ga0137368_105434811
59Ga0137361_104001322
60Ga0137373_109575901
61Ga0157282_104230491
62Ga0157286_104305941
63Ga0157306_103221602
64Ga0137407_117761971
65Ga0164301_113287522
66Ga0134087_103397452
67Ga0134081_100178331
68Ga0137403_100959432
69Ga0132258_116036171
70Ga0132257_1007582762
71Ga0132255_1026297472
72Ga0182036_102900103
73Ga0184604_101474502
74Ga0184638_12633721
75Ga0184609_103422242
76Ga0066662_129108581
77Ga0066669_114749692
78Ga0066669_123862531
79Ga0173481_102784462
80Ga0193756_10522702
81Ga0193754_10049193
82Ga0193703_10383482
83Ga0193715_10761791
84Ga0193707_10665522
85Ga0193731_10237681
86Ga0126371_123730542
87Ga0224452_10479101
88Ga0222623_102646762
89Ga0222622_109569301
90Ga0207697_102849761
91Ga0207697_103438761
92Ga0207704_114892322
93Ga0209468_11099491
94Ga0257146_10714122
95Ga0209974_100651742
96Ga0307296_105478121
97Ga0307312_111211422
98Ga0307289_102532881
99Ga0307300_103274451
100Ga0075377_117975601
101Ga0075405_121647901
102Ga0075394_117007621
103Ga0068589_116840641
104Ga0170820_178666361
105Ga0170818_1063258721
106Ga0310813_114120402
107Ga0307469_115693291
108Ga0310917_103552933
109Ga0310891_102453162
110Ga0306926_128635231
111Ga0306922_102174971
112Ga0306920_1009321952
113Ga0310812_102962342
114Ga0214472_112288831
115Ga0310810_105477231
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 60.00%    Coil/Unstructured: 40.00%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090SVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
90.4%9.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Serpentine Soil
Grasslands Soil
Grass Soil
Soil
Grasslands Soil
Grass Soil
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Agricultural Soil
Arabidopsis Rhizosphere
Arabidopsis Thaliana Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Populus Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Corn Rhizosphere
15.7%10.4%6.1%13.9%5.2%3.5%6.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_047249702170459010Grass SoilVQRSSANGDFSLNFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
F62_017291702170459010Grass SoilHFVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGAGTGPLAGIHGQGTFVFTGLTSLTDVIYYVYTP
FA3_111472602170459023Grass SoilQRTSANGDFSLTFDEVLSYNGGTLGYRGEGGLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
N55_057902002189573000Grass SoilEAGTQTFVQFDFTGLHDICLADGSVVTGTVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
FE1_064450702189573002Grass SoilQAGRQTFVEFDFTGQHDICLADGSVVTGVVEGHLVQRTSVNGDFSLTFDEILSYNGGTLGYRGEGSLTRGNWQSNVVTVGAGTGPLAGIHGQGTFVFTGLTSLADVIYYVYTP
FE2_079330602189573003Grass SoilFTGLHDICLADRSVVTGIVEGHLAQRSSANGDFSLTFDEVLTYNGGTLGYRGGGSLTGDNWHSHVTTVGAGTGPLAGIHGHGTFVFTGPASLTDVIYYVYTP
JGI10214J12806_1029080223300000891SoilVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGLTSLADVIYYVYTP*
Ga0066690_1089885813300005177SoilFDFTGLHDICLADRSVVAGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0066678_1039679623300005181SoilIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0066678_1063055523300005181SoilIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066676_1006850853300005186SoilANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0070683_10229431713300005329Corn RhizosphereVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0070689_10070946213300005340Switchgrass RhizosphereTGLHTICLADRSVVTGIIEGHLVQRTSANGDFSLTFDEVLSYNGGTLGFRGNGSLTGDNWQSHVASVGKGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0070659_10150832313300005366Corn RhizosphereQTFVEFDFTGLHDICLADGSEVTGTVAGHLVQRTSANGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0070714_10237205113300005435Agricultural SoilRQAGRQTFVQFDFTGLHDICLADHSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0070710_1015645343300005437Corn, Switchgrass And Miscanthus RhizosphereFDFTGLHDICLADRSVVTGIVEGHLVQRISANRDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0066682_1045771613300005450SoilDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0070662_10151158223300005457Corn RhizosphereGHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEGSLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0070707_10189207613300005468Corn, Switchgrass And Miscanthus RhizosphereVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066661_1051102013300005554SoilDICLADRSVVAGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066700_1070253713300005559SoilSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066708_1084050423300005576SoilSVVTGIVAGHLVQRTSANGDFSLTFNEVLSYNGGMLGYRGQGILTGGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0066691_1089660113300005586SoilSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDAIYYVYTP*
Ga0066905_10099941923300005713Tropical Forest SoilSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066903_10083635513300005764Tropical Forest SoilQRISANGDFSLTFDEVLSYNGGTLGYRGEGGLTGGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPTSLADVIYYVYAP*
Ga0066903_10576837223300005764Tropical Forest SoilVREAGRQTFVEFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0070712_10054200513300006175Corn, Switchgrass And Miscanthus RhizosphereQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGQGILTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066665_1050061623300006796SoilQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0066665_1138872423300006796SoilVTGIVEGHLVQRSSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066659_1122500313300006797SoilDRSVVTGIVEGHLVQRISANGDFSLTFDEILSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0066659_1148562313300006797SoilIVEGHLVQRISANGDFSLTFDEILSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0066660_1059640113300006800SoilGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGVGILTGGNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0075428_10268570913300006844Populus RhizosphereFVEFDFTGLHDICLADGSQVTGTVAGHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0075425_10087227613300006854Populus RhizosphereFVEFDFTGLHDICLADGSVVTGIVEGHLVQRISANGDFSLTFDEILSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0075434_10125432623300006871Populus RhizosphereTGIVEGHLVQRTSANGDFSLRFDEVLSYNGGTLGYRGEGSLTRGNWHSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0075435_10054473313300007076Populus RhizosphereGRQTFVEFDFTGLHDICLADHSVVTGIVEGHLVQRTSANGDFSLTVDEILSYNGGELRYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0099791_1010814813300007255Vadose Zone SoilQAGSQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0075418_1309092013300009100Populus RhizosphereVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0111538_1395891713300009156Populus RhizosphereQAGRQTFVEFDFTGLHDICLEDHSVVTGIVEGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFEFTGPASFADLIYYVYTP*
Ga0075423_1250106913300009162Populus RhizosphereTRQAGRQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISGNGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0105241_1125219313300009174Corn RhizosphereTGIVEGHLMQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRSNWRSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0105242_1226147613300009176Miscanthus RhizosphereGRQTFVEFDFTGLHDICLADHSVVTGVVEGHLVQRISANGDFSLTVDEVLSYNGGTLGYRDEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0126315_1088341013300010038Serpentine SoilQTFVQFDFTGLHDICLADGSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0126308_1109615523300010040Serpentine SoilVEGHLVQRMSANGDFSLTVDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYAP*
Ga0126314_1129399913300010042Serpentine SoilFVQFDFTGLHDICLADGSVVTGIVTGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVVTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134082_1010192923300010303Grasslands SoilFVEFDFTGLHDICLADHSVVTGIVEGHLVQRISADGDFSLTFDEVLSYNDGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134109_1019857423300010320Grasslands SoilLVQRISANGDFSLTFDEVLSYNGGTLGYRGQGILTGGNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP*
Ga0134084_1006775613300010322Grasslands SoilHSVVTGIVEGHLVQRISADGDFSLTFDEVLSYNDGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134064_1011183613300010325Grasslands SoilDGSVVTGIVEGHLAQRSSANGDFSLTFDEVLSYNGGTLGYLGGGSLTGGNWHSHVATVGNGTGPLAGIHGHGTFVFTGPTSLTDVIYYVYTP*
Ga0134062_1021624813300010337Grasslands SoilGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0134124_1200670223300010397Terrestrial SoilLADGSAVIGIVEGHLVQRISANGDFSLTFAEVLSYNGGTLGYRGEGSLTGGNWHSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0137364_1048691813300012198Vadose Zone SoilICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTLGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0137365_1128551713300012201Vadose Zone SoilRQAGSQTFVQFDFTGLHDICLADRSVVTGIVAGHLIQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0137376_1114074313300012208Vadose Zone SoilTFDEVLSYNGGTLGYRGEGSLTGANWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASIADVIYYVYTP*
Ga0137377_1055013123300012211Vadose Zone SoilDFSLTFDEVLSYNGGTLGYRGEGSLTGANWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0137370_1087347923300012285Vadose Zone SoilVTGIVAGHLVQRTSANGDFGLNFDEVLSYNGGTLGYRGAGSLTGGNWHSHVTTVGNGTGPLAGIHGQGTFVFTGPASLTDVINYVYTP*
Ga0137371_1058743933300012356Vadose Zone SoilFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYMP*
Ga0137368_1054348113300012358Vadose Zone SoilRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPPAGIHGQGTFVFTGPASIADVIYYVYTP*
Ga0137361_1040013223300012362Vadose Zone SoilAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGRGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0137373_1095759013300012532Vadose Zone SoilSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSHVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0157282_1042304913300012904SoilGSQTFVEFDFTGLHTICLGDGSVVTATIEGHLVQRTSANGDFSLTFDEVLSYNGGTLGFRGEGTLTGSNWQSNVMTVGYGTGPLAGIHGQGTFVFTGPTTLTDVVYYVYTP*
Ga0157286_1043059413300012908SoilDHSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGVTLGYRGEGSLTRGNWHSNVVTVGFGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0157306_1032216023300012912SoilFDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVSTGPTSLTDVIYYVYTP*
Ga0137407_1177619713300012930Vadose Zone SoilICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0164301_1132875223300012960SoilTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGSLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0134087_1033974523300012977Grasslands SoilTGLHDICLADGSVVTGIVAGHLVQRTSANGDFGLNFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHRQGTFVFTGPASLTDLIYYVYTP*
Ga0134081_1001783313300014150Grasslands SoilSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP*
Ga0137403_1009594323300015264Vadose Zone SoilSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0132258_1160361713300015371Arabidopsis RhizosphereFTGLHDICLADRSVVTGIVEGHLAQRSSANGDFSLTFDEVLTYNGGTLGYRGGGSLTGDNWHSHVTTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP*
Ga0132257_10075827623300015373Arabidopsis RhizosphereDFTGLHDICLADGSAVIGIVEGHLVQRISANGDFSLTFAEVLSYNGGTLGYRGEGGLRGGNWQSNVMTVGLGTGSLAGIHGQGTFVFTGPASLADTIYYVYTP*
Ga0132255_10262974723300015374Arabidopsis RhizosphereGRQTFVEFDFTGLHDICLADGSVVTGIVEGHMVQRISANGDFSLRFDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVSTGPTSLTDVIYYVYTP*
Ga0182036_1029001033300016270SoilQTFVEFDFTGLHDICLEDHSVVTGIVEGHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFWFTGPASFADLIYYVYTP
Ga0184604_1014745023300018000Groundwater SedimentVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0184638_126337213300018052Groundwater SedimentFSLTFDEVLSYNGGTLGYRGVGILTGGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0184609_1034222423300018076Groundwater SedimentFVQFDFTGLHDICLADGSVVTGIVAGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0066662_1291085813300018468Grasslands SoilANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0066669_1147496923300018482Grasslands SoilSVVTGIVEGHLAQRSSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0066669_1238625313300018482Grasslands SoilSVVTGIVEGHLAQRSSANGDFSLTFDEVLSYNGGTLGYRGGGSLTGENWHSHVTTVGAGTGPLAGIHGHGTFVFTGPTSLTDVIYYVYTP
Ga0173481_1027844623300019356SoilEFDFTGLHEICLADGSVVTGIVEGHMVQRISANGDFSLRFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193756_105227023300019866SoilSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193754_100491933300019872SoilDICLADGSVVKGIVEGHLSQRISANGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0193703_103834823300019876SoilDGSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0193715_107617913300019878SoilVRQAGRQTFVQFDFTGLHDICLADGSVVTGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193707_106655223300019881SoilISANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSHVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0193731_102376813300020001SoilICLADRSVVTGIVTGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0126371_1237305423300021560Tropical Forest SoilQRISANGDFSLTFDEVLSYNGGTLGYRGEASLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0224452_104791013300022534Groundwater SedimentVVTGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0222623_1026467623300022694Groundwater SedimentHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSHVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0222622_1095693013300022756Groundwater SedimentLADGSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0207697_1028497613300025315Corn, Switchgrass And Miscanthus RhizosphereEGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGTGTGPLTGIHGQGTFEFTGPASFADLIYYVYTP
Ga0207697_1034387613300025315Corn, Switchgrass And Miscanthus RhizosphereAGRQTFVEFDFTGLHDICLADHSVVTGVVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGGLTGGNWHSNVQTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0207704_1148923223300025938Miscanthus RhizosphereVEGHLMQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWRSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0209468_110994913300026306SoilSLTFDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0257146_107141223300026374SoilGTQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTVDEVLSYNGGTLGYRGEGSLTGGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0209974_1006517423300027876Arabidopsis Thaliana RhizosphereVTGIVAGHLVQRTSTNGDFSLTFDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0307296_1054781213300028819SoilDICLADRSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0307312_1112114223300028828SoilGIVAGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0307289_1025328813300028875SoilEGHMSQRISANGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0307300_1032744513300028880SoilRQAGRQTFVQFDFTGLHDICLADGSVVTGIVEGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0075377_1179756013300030844SoilVQRTSANGDFSLTFDEVLSYNGGTLGYRGQGILTGDNWHSHVVTVGNGTGPLAGIHGQGTFVFTGLTSLADVIYYVYTP
Ga0075405_1216479013300030847SoilGHLVQRTSANGDFSLTFDEVLSYNGGTLGYRGGGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVFTGLTSLTDVIYYVYTP
Ga0075394_1170076213300030969SoilLRADERHPRLLRQQRSRRPERQAGRQTFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0068589_1168406413300030979SoilVRQAGRQTFVEFDFTGLHEICLADGSVVTGIVAGHFVQRTSANGDFSLTFDEVLSYNGGTLGYRGEGSLTGDNWQSHVTTVGAGTGPLAGIHGHGTFVFTGPASLTDVIYYVYTP
Ga0170820_1786663613300031446Forest SoilISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRDNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLADVIYYVYTP
Ga0170818_10632587213300031474Forest SoilFVQFDFTGLHDICLADRSVVTGIVEGHLVQRISANGDFSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPTSLTDVIYYVYTP
Ga0310813_1141204023300031716SoilRQAGSQTFVQFDFTGLHDICLADRSVVTGIVAGHLVQRSSANGDFSLTFDEVLSYNGGTLGYRGQGILTGGNWQSHVVTVGDGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0307469_1156932913300031720Hardwood Forest SoilVRQAGRQTFVEFDFTGLHDICLADRSVVTGIVEGHLVQRTSDNGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLAGIHGQGTFVFTGPTSLADVIYYVYTP
Ga0310917_1035529333300031833SoilSVVTGIVEGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFWFTGPASFADLIYYVYTP
Ga0310891_1024531623300031913SoilVTGHLVQRTSANGDFSLTFDEVLSHNGGTLGYRGQGILTGGNWQSHVVTVGNGTGPLAGIHGQGTFVFTGPTTLTDVVYYVYTP
Ga0306926_1286352313300031954SoilTFDEILSYNGGTLGYRGEASLSRGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0306922_1021749713300032001SoilTGLHDICLADGSVVTGIVEGHLVQRTSENGDLGLRFDEVLSYGGGTLGYRGEASLTRGNWQSHVVTVGAGTGPLNGIHGQGTFWFTGPASFADLIYYVYTP
Ga0306920_10093219523300032261SoilLHDICLADHSVVTGIVEGHLVQRTSDNGDFSLTFDEILSYNGGTLGYRGEASLSRGNWHSNVVTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP
Ga0310812_1029623423300032421SoilDHSVVTGIVEGHMVQRISANGDFSLRFDEVLSYNGGTLGYRGQGSLTGGNWHSHVVTVGNGTGPLAGIHGQGTFVSTGPTSLTDVIYYVYTP
Ga0214472_1122888313300033407SoilDGDLTLRFDEVLSYGGGTLGYRGEASLSGSNWQGHVQTVGAGAGALAGISGQGSFFPTGPTSFADVIDYVYR
Ga0310810_1054772313300033412SoilSLTFDEVLSYNGGTLGYRGEGSLTRGNWQSNVMTVGLGTGPLAGIHGQGTFVFTGPASLTDVIYYVYTP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.