Metagenome Family F080306

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080306
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	69 residues
Representative Sequence	VERLLQSTPGVRHANIAAADAGSVTFDVTARGGAAGLGQALAGSTRLVRVGGAGESVVYRYQPQG
Number of Associated Samples	102
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.57 %
% of genes near scaffold ends (potentially truncated)	93.04 %
% of genes from short scaffolds (< 2000 bps)	87.83 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.217 % of family members)
Environment Ontology (ENVO)	Unclassified (46.087 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (41.739 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.05% β-sheet: 33.33% Coil/Unstructured: 51.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01066	CDP-OH_P_transf	84.35
PF00308	Bac_DnaA	6.09
PF03358	FMN_red	2.61
PF01019	G_glu_transpept	1.74
PF00708	Acylphosphatase	0.87
PF09839	DUF2066	0.87
PF01464	SLT	0.87
PF00070	Pyr_redox	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	84.35
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	84.35
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	84.35
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	6.09
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	6.09
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	93.91 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	82.61 %
Unclassified	root	N/A	3.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	3.48 %
Unclassified	root	N/A	3.48 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.48 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.61 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.87 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.48 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.61 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.87 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	3.48 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2.61 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.87 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16702035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1462	Open in IMG/M
3300003505\|JGIcombinedJ51221_10371383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	581	Open in IMG/M
3300005179\|Ga0066684_10344755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	995	Open in IMG/M
3300005436\|Ga0070713_100686989	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005439\|Ga0070711_100151143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1751	Open in IMG/M
3300005444\|Ga0070694_100155783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300005451\|Ga0066681_10041349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2481	Open in IMG/M
3300005559\|Ga0066700_10012953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4410	Open in IMG/M
3300006175\|Ga0070712_100858675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	781	Open in IMG/M
3300006358\|Ga0068871_100893371	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300007258\|Ga0099793_10213697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	927	Open in IMG/M
3300009792\|Ga0126374_10214312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1229	Open in IMG/M
3300009826\|Ga0123355_11806067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	576	Open in IMG/M
3300010322\|Ga0134084_10303519	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300010326\|Ga0134065_10000434	All Organisms → cellular organisms → Bacteria → Proteobacteria	8566	Open in IMG/M
3300010329\|Ga0134111_10263523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	710	Open in IMG/M
3300010376\|Ga0126381_100722900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1425	Open in IMG/M
3300010376\|Ga0126381_104132709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	564	Open in IMG/M
3300012205\|Ga0137362_10731650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	849	Open in IMG/M
3300012351\|Ga0137386_10286156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1186	Open in IMG/M
3300012925\|Ga0137419_10794251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	774	Open in IMG/M
3300014150\|Ga0134081_10028487	Not Available	1607	Open in IMG/M
3300015051\|Ga0137414_1107845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1154	Open in IMG/M
3300015054\|Ga0137420_1267477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1520	Open in IMG/M
3300015373\|Ga0132257_103405840	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300015374\|Ga0132255_102723297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	756	Open in IMG/M
3300016270\|Ga0182036_11515124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	563	Open in IMG/M
3300016341\|Ga0182035_10861160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	798	Open in IMG/M
3300016357\|Ga0182032_10029822	All Organisms → cellular organisms → Bacteria → Proteobacteria	3311	Open in IMG/M
3300016404\|Ga0182037_12011209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	519	Open in IMG/M
3300016445\|Ga0182038_10452227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1087	Open in IMG/M
3300017961\|Ga0187778_10124423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1615	Open in IMG/M
3300017973\|Ga0187780_10309529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1111	Open in IMG/M
3300017975\|Ga0187782_11596492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	515	Open in IMG/M
3300017994\|Ga0187822_10255081	All Organisms → cellular organisms → Bacteria → Proteobacteria	604	Open in IMG/M
3300018482\|Ga0066669_11064378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	730	Open in IMG/M
3300019789\|Ga0137408_1117239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	584	Open in IMG/M
3300019789\|Ga0137408_1325469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	584	Open in IMG/M
3300020170\|Ga0179594_10264405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	649	Open in IMG/M
3300020199\|Ga0179592_10145021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1086	Open in IMG/M
3300020580\|Ga0210403_10490988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	998	Open in IMG/M
3300021180\|Ga0210396_11082303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	676	Open in IMG/M
3300021432\|Ga0210384_10291348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1469	Open in IMG/M
3300021433\|Ga0210391_10468251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	989	Open in IMG/M
3300021559\|Ga0210409_10072543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3199	Open in IMG/M
3300021560\|Ga0126371_12730667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	599	Open in IMG/M
3300021560\|Ga0126371_13712446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	515	Open in IMG/M
3300021953\|Ga0213880_10170022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	602	Open in IMG/M
3300025916\|Ga0207663_10221266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1377	Open in IMG/M
3300025928\|Ga0207700_10056523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2954	Open in IMG/M
3300025928\|Ga0207700_10608268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	973	Open in IMG/M
3300025929\|Ga0207664_11923107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	514	Open in IMG/M
3300025939\|Ga0207665_10567485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	883	Open in IMG/M
3300026329\|Ga0209375_1052101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	2036	Open in IMG/M
3300026355\|Ga0257149_1047489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	618	Open in IMG/M
3300026482\|Ga0257172_1068629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	650	Open in IMG/M
3300026557\|Ga0179587_10550094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	758	Open in IMG/M
3300027034\|Ga0209730_1031245	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300027603\|Ga0209331_1084387	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300027703\|Ga0207862_1143401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	715	Open in IMG/M
3300027869\|Ga0209579_10107096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1482	Open in IMG/M
3300027874\|Ga0209465_10559033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	569	Open in IMG/M
3300031549\|Ga0318571_10469670	All Organisms → cellular organisms → Bacteria → Proteobacteria	502	Open in IMG/M
3300031561\|Ga0318528_10254799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	941	Open in IMG/M
3300031564\|Ga0318573_10607893	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300031572\|Ga0318515_10120491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1386	Open in IMG/M
3300031573\|Ga0310915_10173448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1500	Open in IMG/M
3300031573\|Ga0310915_10423237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	946	Open in IMG/M
3300031573\|Ga0310915_10428195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	940	Open in IMG/M
3300031640\|Ga0318555_10142818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1280	Open in IMG/M
3300031680\|Ga0318574_10080222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1778	Open in IMG/M
3300031713\|Ga0318496_10728836	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300031715\|Ga0307476_10177249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1541	Open in IMG/M
3300031719\|Ga0306917_11064715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	630	Open in IMG/M
3300031723\|Ga0318493_10405235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	746	Open in IMG/M
3300031744\|Ga0306918_10056519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2632	Open in IMG/M
3300031764\|Ga0318535_10144622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1058	Open in IMG/M
3300031765\|Ga0318554_10203943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1125	Open in IMG/M
3300031771\|Ga0318546_11058875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	570	Open in IMG/M
3300031777\|Ga0318543_10055442	All Organisms → cellular organisms → Bacteria → Proteobacteria	1628	Open in IMG/M
3300031794\|Ga0318503_10023020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1773	Open in IMG/M
3300031797\|Ga0318550_10291552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	791	Open in IMG/M
3300031799\|Ga0318565_10110822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1320	Open in IMG/M
3300031799\|Ga0318565_10192357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	992	Open in IMG/M
3300031805\|Ga0318497_10308951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	881	Open in IMG/M
3300031819\|Ga0318568_10254834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1087	Open in IMG/M
3300031833\|Ga0310917_10373977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	968	Open in IMG/M
3300031833\|Ga0310917_10829819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	624	Open in IMG/M
3300031845\|Ga0318511_10305323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	720	Open in IMG/M
3300031846\|Ga0318512_10143129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1150	Open in IMG/M
3300031846\|Ga0318512_10262280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	854	Open in IMG/M
3300031859\|Ga0318527_10105829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1158	Open in IMG/M
3300031890\|Ga0306925_10627336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1132	Open in IMG/M
3300031893\|Ga0318536_10263175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	876	Open in IMG/M
3300031894\|Ga0318522_10149048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	881	Open in IMG/M
3300031942\|Ga0310916_10378074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1204	Open in IMG/M
3300031946\|Ga0310910_10298949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1266	Open in IMG/M
3300031959\|Ga0318530_10507438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300031981\|Ga0318531_10127219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1133	Open in IMG/M
3300032025\|Ga0318507_10100218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1207	Open in IMG/M
3300032025\|Ga0318507_10315234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	680	Open in IMG/M
3300032039\|Ga0318559_10506213	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300032041\|Ga0318549_10153393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1026	Open in IMG/M
3300032051\|Ga0318532_10179797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	751	Open in IMG/M
3300032055\|Ga0318575_10036501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2190	Open in IMG/M
3300032064\|Ga0318510_10080085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1212	Open in IMG/M
3300032068\|Ga0318553_10037264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2357	Open in IMG/M
3300032068\|Ga0318553_10462848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	664	Open in IMG/M
3300032205\|Ga0307472_101978365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	583	Open in IMG/M
3300032828\|Ga0335080_10511524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1274	Open in IMG/M
3300033289\|Ga0310914_10135454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2158	Open in IMG/M
3300033289\|Ga0310914_11212991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.52%
Host-Associated	Host-Associated	3.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.65%
Plants	Host-Associated → Plants	2.61%
Aquatic	Environmental → Aquatic	0.87%
Arthropoda	Host-Associated → Arthropoda	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.74%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.87%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.87%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.13%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.87%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.48%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.87%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03067770	2088090014	Soil	VQIEGVNSLLAYATVERLLQSTPGVRRANIAGADGGSITFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
JGIcombinedJ51221_103713832	3300003505	Forest Soil	TVERLLQSTPGVRHANIAAADAGSVTFDVTARGGAAGLGQALAGSTRLVRVSGAGESVVYRYQPQG*
Ga0066684_103447553	3300005179	Soil	LESVPGVRRANIAAAEANSAAFDVTVRGGAAGLEEALAGSTRLTRVSADGAPPAYRYQPRG*
Ga0066678_107663812	3300005181	Soil	IAAADASGVAFDVTVRGGAVGLDQGLAGSTRLVRTSAAGAAAVYRYQPQG*
Ga0070713_1006869893	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ATVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG*
Ga0070711_1001511434	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DGVASLPDYANVARLLESVPGVRRANLVVADPGSVVFELTVRGGAAALEQGLAGSTRLRGGGTPPVYRYQPQG*
Ga0070694_1001557831	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SVPGVRRANLVVADPGSVVFELTVRGGAAALEQGLAGSTRLRGGGTPPVYRYQPQG*
Ga0066681_100413495	3300005451	Soil	ANIAAAEANSAAFDVTVRGGAAGLEEALAGSTRLTRVSADGAPPAYRYQPRG*
Ga0066700_100129537	3300005559	Soil	AAVQRLLESVPGVRRANIAAADANSAAFDVTVRGGAAGLVEALAGSTRLTRVSADGAPPAYRYQPRG*
Ga0070712_1008586752	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VERLLQSTPGVRHANIAAADAGSVTFDVTARGGAAGLGQALAGSTRLVRVGGAGESVVYRYQPQG*
Ga0068871_1008933711	3300006358	Miscanthus Rhizosphere	ATSLAEADALARVQIEGVNSLLAYATVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG*
Ga0099793_102136973	3300007258	Vadose Zone Soil	VDYAAIERMLQSVPGVRRANIAVADANGVAFDVTVRGGAAGLDQGLAGSTRLVRTGSAGAAPVYRYQPQG*
Ga0126374_102143121	3300009792	Tropical Forest Soil	QSTPGVRRANIAAADAGNVTFEVTARGGAAGLGQALAGSTRLVRASGTGDTVVYRYQPQG
Ga0123355_118060672	3300009826	Termite Gut	ADAGARVQVDGVTSLAAYAAVERLLQSVPGVRRANIIAADAGSVTFDVTARGGAAGIEQELTGSTHLIRTGGAGERVVYRYQPPG*
Ga0134084_103035192	3300010322	Grasslands Soil	VRRANIAAAEANSAAFDVTVRGGAAGLEEALAGSTRITRVSADGAPPAYRYQPRG*
Ga0134065_100004341	3300010326	Grasslands Soil	NIAAADANGVAFDVTVRGGAAGLDQGLAGSTRLVRTSAAGAAAVYRYQPQG*
Ga0134111_102635232	3300010329	Grasslands Soil	IEGVRGLVDYAAIERLLQSVPGVRRANIAAAEANSVAFDVTVRGGAPGLDQALAGSTRLVRASTAGAAPVYRYQPQG*
Ga0126381_1006034241	3300010376	Tropical Forest Soil	SIPGVRRANVAAADSGSVTFDVTARGGAAGIERELNGSPRLVHTGGTGDRVIYRYQPQG*
Ga0126381_1007229003	3300010376	Tropical Forest Soil	AYAAVERLLQSTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPTSGTGGVVVYRYQPQG*
Ga0126381_1041327092	3300010376	Tropical Forest Soil	ADARVQIDGVNSLAAYAEVERLLQSVPGVRHANIAAADANSVTFDVTARGGAAGIAQELTGSTRLVRTASAGERMVYRYQPHS*
Ga0137362_107316501	3300012205	Vadose Zone Soil	RANIAVADANGVAFDVTVRGGAAGLDQGLAGFTRLVRASTAGAAPVYRYQPQG*
Ga0137386_102861561	3300012351	Vadose Zone Soil	IAAAEANSAAFDVTVRGGAAGLEEALAGSTRLTRVSADGAPPAYRYQPRG*
Ga0137419_107942512	3300012925	Vadose Zone Soil	ERLLQSVPGMRRANIAVADANGVAFDVTVRGGAAGLDQGLAGSTRLVRTGTAGAAPVYRYQPQG*
Ga0134081_100284873	3300014150	Grasslands Soil	VRRANIAAADANGVAFDVTVRGGAAGLDQGLAGSTRLVRTSAAGAAAVYRYQPQ
Ga0137414_11078453	3300015051	Vadose Zone Soil	AAIERLLQNVPGMRRANIAVADANGVAFDVTVRGGAAGLDQGLAGSTRLVRTGSAGAAPVYRYQPQG*
Ga0137420_12674771	3300015054	Vadose Zone Soil	LQSVPGVRRANIRANIAVADANGVAFDVTVRGGAAGLDQGLAGSTRLVRTGTAGAAPVYRYQPQG*
Ga0132257_1034058401	3300015373	Arabidopsis Rhizosphere	GVNSLLAYATVERLLQSAPGVRRANIAGADGASVIFDVTARGGATGLVQALAGSTHLVRVSGTGESVVYRYQPQG*
Ga0132255_1027232972	3300015374	Arabidopsis Rhizosphere	LADADAAVRVQIDGVNSLLAYATVERLLQSAPGVRRANIAGADGASVIFDVTARGGATGLVQALAGSTHLVRVSGTGESVVYRYQPQG*
Ga0182036_115151242	3300016270	Soil	VEGVNSLLGYATVERLLQSTPGVRRTNIAGADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG
Ga0182035_108611602	3300016341	Soil	MLSDNQLSQINIAAADGASVTFDVTVRGGAAGLGQALAGSTHLVRTGASADSAVYRYQPQ
Ga0182032_100298221	3300016357	Soil	EADALARVQIEGVNSLLAYAAVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0182037_120112092	3300016404	Soil	QPGTSLADADATARVQIEGVNSLDAYAAVERLLQNTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPASGTGGIVVYRYQPKG
Ga0182038_104522273	3300016445	Soil	YATVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG
Ga0187778_101244234	3300017961	Tropical Peatland	LQSTPGVRRANIAAADAGSVTFTVTARGGAAGLEQALAGGNRLIRIGSSGAPLVYRYQPQ
Ga0187780_103095291	3300017973	Tropical Peatland	YAAVTRLLQSVPGVRRASIAAAAGGSVTFEVTVRGGAAALEQALAGSTRLVPTGGTGPALAYRYQPQG
Ga0187782_115964921	3300017975	Tropical Peatland	IERLLQSVPGVRRANISAADGGSVTFDVIARGGAAGLEQALAATPRLVRQNGAGPQVVYRYQPQG
Ga0187822_102550812	3300017994	Freshwater Sediment	PQATSLAEAEARARVQVQGVNSLLAYATVERLLQSVPGVRRANIVGVDAGSVTFDVTARGGAAGLGQALTGSARLVRVSGTGDAMVYRYQPQG
Ga0066669_110643781	3300018482	Grasslands Soil	ANIAAAEANSAAFDVTVRGGAAGLEEALAGSTRLTRVSADGAPPAYRYQPRG
Ga0137408_11172391	3300019789	Vadose Zone Soil	VRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTGSAGATPVYRYQPQG
Ga0137408_13254691	3300019789	Vadose Zone Soil	RLLQSVAGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTGSAGATPVYRYQPQG
Ga0179594_102644051	3300020170	Vadose Zone Soil	IEGVRGLVDYAAIERLLQSVAGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTGSAGATPVYRYQPQG
Ga0179592_101450211	3300020199	Vadose Zone Soil	EGVRGLVDYAAIERLLQSVAGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTGSAGATPVYRYQPQG
Ga0210403_104909881	3300020580	Soil	PATSLAEADAPARVQVDGVNSLLAYATVERLLQSTPGVRHANIAAADAGSVTFDVTARGGAAGLGQALAGSTRLVRVSGAGESVVYRYQPQG
Ga0210396_110823032	3300021180	Soil	QSVPGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTSTTGAAPVYRYQPQG
Ga0210384_102913481	3300021432	Soil	LQSVPGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTSTTGATPVYRYQPQ
Ga0210391_104682511	3300021433	Soil	ERLLRGIPAVRRANIAAADAGGITFDVTVRGGAAGLQQGLTGTPLVLRDSRADQLVYRYQ
Ga0210409_100725431	3300021559	Soil	QSVPGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSPRLVRTSAAGATPVYRYQPQG
Ga0126371_127306672	3300021560	Tropical Forest Soil	LAAYAEVERLLQSVPGVRHANIAAADANSVTFDVTARGGAAGIAQELTGSTRLVRSGGAGERMVYRYQPHS
Ga0126371_137124461	3300021560	Tropical Forest Soil	GVANLGDYTNVARILESVAGVRRANIVVADPNSVVFDVTVRGGAAALEQGLSGSTRLRGGGPQPVYRYQPQG
Ga0213880_101700221	3300021953	Exposed Rock	PATSLADADARTRVQVQGVNSLLGYASVERLLQSTPGVRHANIAAVDANSVTFDVTARGGAAGLGQALAGSARLVRVSGTGESMVYRYQPQG
Ga0207663_102212661	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DGVASLPDYANVARLLESVPGVRRANLVVADPGSVVFELTVRGGAAALEQGLAGSTRLRGGGTPPVYRYQPQG
Ga0207700_100565231	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VGSTPGVRRANIAGADAASVTFDVIARGGAAGLAQALAGSARLVRVSGTGEALVYRYQPQ
Ga0207700_106082681	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LLAYATVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0207664_119231071	3300025929	Agricultural Soil	ESVPGVRRANLVVADPGSVVFELTVRGGAAPLEQGLAGSTRLRGGGTPPVYRYQPQG
Ga0207665_105674851	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LVDYAAIERLLQSVPGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTGSAGTTPVYRYQPQG
Ga0209375_10521014	3300026329	Soil	ADYAAVQRLLESVPGVRRANIAAAEANSAAFDVTVRGGAAGLEEALAGSTRLTRVSADGAPPAYRYQPRG
Ga0257149_10474891	3300026355	Soil	VRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTSAAGAPAVYRYQPQG
Ga0257172_10686292	3300026482	Soil	RLLQSVAGVRRANIAAAEANSVAFDVTVRGGATGLDQGLAGSTRLVRTSAAGAAAVYRYQPQG
Ga0179587_105500942	3300026557	Vadose Zone Soil	RRANIAVADANGVAFDVTVRGGAAGLDQGLAGSTRLVRTGSAGAAPVYRYQPQG
Ga0209730_10312451	3300027034	Forest Soil	YASVEQLLQSVPGVRRANIAAAEAGSVTFIVTARGGAAGLEQELSATLRLVRVGGGVAPGAQLEYRYQPQG
Ga0209331_10843872	3300027603	Forest Soil	MKFKEERPYANIAAAEANSVAFDVTVRGGAAGLDQGLTGSTRLVRTSAAGAAAVYRYQPQ
Ga0207862_11434012	3300027703	Tropical Forest Soil	DVRVRIDGVDTLAAYASVERLLQSVPGVRRANIAAAEAASVTFIVTARGGAAGLEQELSATLRLVRVGGGVAPGAQLEYRYQPEG
Ga0209579_101070963	3300027869	Surface Soil	ANIAAADGNSVVFDVLVRGGADGLAQALSGSTHLTRVTSDAGRLVYRYQPQG
Ga0209465_105590332	3300027874	Tropical Forest Soil	VQIEGVNSLLAYAAVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0318571_104696701	3300031549	Soil	VLVPRPATSLAEAEARTCVQIEGVNSLLAYATVERLLQSTPGVRHANVAAVDGGSITFDVTARGGAAGLGQALAGSARLVRVRGTGESAVYRYQPQG
Ga0318528_102547993	3300031561	Soil	GVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPASGTGGIVVYRYQPKG
Ga0318573_106078931	3300031564	Soil	IEGVNSLDAYAAVERLLQNTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPASGTGGIVVYRYQPKG
Ga0318515_101204911	3300031572	Soil	PGVRRANIAAADAGSVTFEVTARGGAAGLGQALSGSTRLVRASGTGDAVVYRYQPQG
Ga0310915_101734481	3300031573	Soil	TSLAEADAAAHIQVEGVNSLLGYATVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTHLVRSGGAGDSIVYRYQPQG
Ga0310915_104232373	3300031573	Soil	LAAYAAVERLLQSTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALSGSTRLVRASGTGDAVVYRYQPQG
Ga0310915_104281953	3300031573	Soil	RLLQNTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPASGTGGIVVYRYQPKG
Ga0318555_101428183	3300031640	Soil	TPGVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPASGTGGIVVYRYQPKG
Ga0318574_100802224	3300031680	Soil	LQSTPGVRRANIAAADPGSVTFEVTARGGAAGLGQALAGSTHLVPASGSGEAVVYRYQPQ
Ga0318496_107288361	3300031713	Soil	ADALARVQIEGVNSLLAYAAVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0307476_101772493	3300031715	Hardwood Forest Soil	AYAEVERLLQSVPGVRHANIAAADANSVTFDVTARGGAAGITQELTGSTRLVRTGGAGARVVYRYQPHS
Ga0306917_110647152	3300031719	Soil	EGVNSLTAYAAVERLLQATPGVRRTNIAAADGASVTFDVTVRGGAAGLGQALAGSTHLVRTGASADSAVYRYQPQG
Ga0318493_104052352	3300031723	Soil	VEGVNSLLGYASVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTHLVRSGGAGDSIVYRYQPQG
Ga0306918_100565196	3300031744	Soil	GVNSLDAYAAVERLLQNTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPASGTGGIVVYRYQPKG
Ga0318535_101446223	3300031764	Soil	PGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0318554_102039431	3300031765	Soil	RCAAARIQVEGVNSLLGYATVERLLQSTPGVRRTNIAGADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG
Ga0318546_110588752	3300031771	Soil	IQVEGVNSLLGYASVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTHLVRSGGAGDSIVYRYQPQG
Ga0318543_100554423	3300031777	Soil	LAYAAVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0318508_10573101	3300031780	Soil	STPGVRRANIAAADPGSVTFEVTARGGAAGLGQALAGSTHLVPASGTGEAVVYRYQPQG
Ga0318503_100230204	3300031794	Soil	VRRTNIAAADGASVTFDVTVRGGAAGLGQALAGSTHLVRTGASADSAVYRYQPQG
Ga0318550_102915522	3300031797	Soil	DADAPARIQIEGVNSLTAYAAVERLLQATPGVRRTNIAAADGASVTFDVTVRGGAAGLGQALAGSTHLVRTGASADSAVYRYQPQG
Ga0318565_101108223	3300031799	Soil	VERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG
Ga0318565_101923571	3300031799	Soil	STPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0318497_103089512	3300031805	Soil	VNSLLAYAAVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0318568_102548343	3300031819	Soil	LQSTPGVRRTNIAGADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQ
Ga0310917_103739773	3300031833	Soil	TPGVRRANIAAAEAGSVTFEVTARGGAAGLGQALAGSTRLVRASGSGDAVVYRYQPQG
Ga0310917_108298191	3300031833	Soil	DAAARIQVEGVNSLLGYASVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTHLVRSGGAGDSIVYRYQPQG
Ga0318511_103053232	3300031845	Soil	PASAAARIQVEGVNSLLGYASVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTHLVRSGGAGDSIVYRYQPQG
Ga0318512_101431291	3300031846	Soil	SLLAYASVERLLQSTPGVRHANVAAVDGGSITFDVTARGGAAGLGQALAGSARLVRVSGTGESVVYRYQPQG
Ga0318512_102622803	3300031846	Soil	QSTPGVRRTSIAAADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG
Ga0318527_101058291	3300031859	Soil	CMRADADAPARIQIEGVNSLTAYAAVERLLQATPGVRRTNIAAADGASVTFDVTVRGGAAGLGQALAGSTHLVRTGASADSAVYRYQPQG
Ga0306925_106273361	3300031890	Soil	DATARVQIQGVNSLDAYAAVERLLQSTPGVRRANIAAADPGSVTFEVTARGGAAGLGQALAGSTRLVPAAGTGGAVVYRYQPHG
Ga0318536_102631753	3300031893	Soil	VRRANIAAAEAGSVTFEVTARGGAAGLGQALAGSTRLRASGSGDAVVYRYQPQG
Ga0318522_101490483	3300031894	Soil	LLAYAAVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0310916_103780743	3300031942	Soil	RIQVEGVNSLLGYASVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTHLVRSGGAGDSIVYRYQPQG
Ga0310910_102989491	3300031946	Soil	QVEGVNSLLGYASVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTHLVRSGGAGDSIVYRYQPQG
Ga0318530_105074382	3300031959	Soil	TDADAYLQIDGVNSLNAYAEVQRLLQSVPGVRRANIAAAEGGSVTFSVTARGGAAGIERELNGSPRLVRTGGTGDHVTYRYQPQS
Ga0318531_101272193	3300031981	Soil	AYAAVERLLQSTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALSGSTRLVRASGTGDAVVYRYQPQG
Ga0318507_101002181	3300032025	Soil	LQNTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALAGSTRLVPASGTGGIVVYRYQPK
Ga0318507_103152341	3300032025	Soil	LLQSTPGVRRTNIAGADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG
Ga0318559_105062132	3300032039	Soil	TPGVRHANVAAVDGGSITFDVTARGGAAGLGQALAGSARLVRVSGTGESVVYRYQPQG
Ga0318549_101533933	3300032041	Soil	PGVRRTNIAAADGASVTFDVTVRGGAAGLGQALAGSTHLVRTGASADSAVYRYQPQG
Ga0318532_101797972	3300032051	Soil	IEGVNSLTAYAAVERLLQATPGVRRTNIAAADGASVTFDVTVRGGAAGLGQALAGSTHLVRTGASADSAVYRYQPQG
Ga0318575_100365011	3300032055	Soil	LAEADAAARIQVEGVNSLLGYATVERLLQSTPGVRRTNIAAADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG
Ga0318510_100800851	3300032064	Soil	ALARVQIEGVNSLLAYAAVERLLQSTPGVRRANIAGADGGSVTFDVTCRGGAAGLGQALAGSSRLVRVSGTGEAVVYRYQPQG
Ga0318553_100372641	3300032068	Soil	LQQPLDAYAAVERLLQSTPGVRRANIAAADPGSVTFEVTARGGAAGLGQALAGSTRLVPAAGTGGAVVYRYQPHG
Ga0318553_104628481	3300032068	Soil	VNSLAAYAAVERLLQSVPGVRHARIASVDGGSVTFDVTARGGAAGIEQGLTGSPRLVRTGGTGEQVVYRYQPQG
Ga0307472_1019783652	3300032205	Hardwood Forest Soil	IEGVKGLVDYAAIERLLQSVPGVRRANIAAAEANSVAFDVTVRGGAAGLDQALSGSTRLVRTGSAGTTPVYRYQPQG
Ga0335080_105115241	3300032828	Soil	VNSLLAYATVERLVESTPGVRRANIAGADAASVTFDVTARGGAAGLAQALAGSAHLVRVSGTGEALVYRYQPQG
Ga0310914_101354541	3300033289	Soil	DADATARVQNDGVNSLVAYAAVERLLQSTPGVRRANIAAADAGSVTFEVTARGGAAGLGQALSGSTRLVRASGTGDAVVYRYQPQG
Ga0310914_112129911	3300033289	Soil	DAAARIQVEGVNSLLGYATVERLLQSTPGVRRTNIAGADAGSVTFDVTARGGAAGLSQALAGSTRLLRSGGAGDSIVYRYQPQG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080306

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences