Metagenome / Metatranscriptome Family F080301

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080301
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	41 residues
Representative Sequence	VPRVYLAGPPFADEYRRRASALLREAGWEPVDPMRRDFR
Number of Associated Samples	108
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.78 %
% of genes near scaffold ends (potentially truncated)	99.13 %
% of genes from short scaffolds (< 2000 bps)	96.52 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.783 % of family members)
Environment Ontology (ENVO)	Unclassified (30.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 14ZMR_03192830 2JGI10216J12902_1126102733 3JGI10216J12902_1156109112 4A15PFW1_107238071 5Ga0062594_1015857481 6Ga0068869_1003567303 7Ga0068868_1021146432 8Ga0068868_1022856942 9Ga0070687_1011274711 10Ga0070711_1003161694 11Ga0070705_1000891741 12Ga0066682_104956741 13Ga0070678_1019519501 14Ga0070662_1011347141 15Ga0070699_1005255963 16Ga0073909_105136561 17Ga0070679_1006305531 18Ga0070732_103143121 19Ga0070704_1010760303 20Ga0066699_102557194 21Ga0066694_105132671 22Ga0068854_1012767261 23Ga0068864_1015108113 24Ga0066903_1060643721 25Ga0068870_104997951 26Ga0068862_1005574854 27Ga0070717_104146423 28Ga0075365_110658072 29Ga0066652_1002424381 30Ga0070712_1010364541 31Ga0068871_1013001412 32Ga0074048_126963431 33Ga0075431_1017152852 34Ga0079218_107418464 35Ga0099827_115867011 36Ga0075418_117047701 37Ga0066709_1030872941 38Ga0114129_129919752 39Ga0111538_115312691 40Ga0105248_104143591 41Ga0126307_114079491 42Ga0105067_10254913 43Ga0105067_10695362 44Ga0126309_103373533 45Ga0126306_105841603 46Ga0134082_103422471 47Ga0126376_116061391 48Ga0134127_102020331 49Ga0134127_107469773 50Ga0137383_106707093 51Ga0137378_111299022 52Ga0137386_108851541 53Ga0137371_108176863 54Ga0137390_109154163 55Ga0157216_100948314 56Ga0136611_102746551 57Ga0157298_102814732 58Ga0164300_103893293 59Ga0164300_104945521 60Ga0164298_107518532 61Ga0164299_107482482 62Ga0164301_118569011 63Ga0164305_120424951 64Ga0157371_104545611 65Ga0163162_104430861 66Ga0120158_100425196 67Ga0120158_104855472 68Ga0182007_102415801 69Ga0132257_1018587692 70Ga0134069_13258392 71Ga0187809_102265753 72Ga0184634_104742161 73Ga0184618_103975551 74Ga0184624_104818292 75Ga0190275_130707032 76Ga0206356_105008912 77Ga0179594_102127533 78Ga0193698_10502051 79Ga0224512_101975831 80Ga0247686_10498511 81Ga0247692_10541133 82Ga0247668_11201031 83Ga0209519_103132261 84Ga0209341_106709381 85Ga0207707_110068151 86Ga0207695_106944013 87Ga0207709_116242272 88Ga0207679_114279531 89Ga0207667_102900604 90Ga0207678_103529163 91Ga0207641_102839601 92Ga0247684_10188541 93Ga0265326_102422352 94Ga0247828_111728051 95Ga0307285_101855702 96Ga0307303_101044401 97Ga0307297_100709153 98Ga0265338_112018662 99Ga0307305_100432984 100Ga0307296_106463322 101Ga0307277_103585561 102Ga0307498_104847451 103Ga0265339_101553263 104Ga0307373_101954253 105Ga0318574_109274712 106Ga0310813_109703432 107Ga0307469_120730452 108Ga0318567_100504024 109Ga0315274_117087071 110Ga0318563_102235533 111Ga0318518_102578733 112Ga0315283_110521413 113Ga0315287_100630375 114Ga0315287_117031551 115Ga0364924_031309_1_108
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60. 14ZMR_03192830 2JGI10216J12902_1126102733 3JGI10216J12902_1156109112 4Ga0062594_1015857481 5Ga0070678_1019519501 6Ga0070662_1011347141 7Ga0070699_1005255963 8Ga0070704_1010760303 9Ga0066699_102557194 10Ga0074048_126963431 11Ga0075431_1017152852 12Ga0099827_115867011 13Ga0111538_115312691 14Ga0126307_114079491 15Ga0105067_10254913 16Ga0126309_103373533 17Ga0134127_107469773 18Ga0137383_106707093 19Ga0137386_108851541 20Ga0137371_108176863 21Ga0157298_102814732 22Ga0164299_107482482 23Ga0182007_102415801 24Ga0132257_1018587692 25Ga0190275_130707032 26Ga0224512_101975831 27Ga0247668_11201031 28Ga0209341_106709381 29Ga0207695_106944013 30Ga0265326_102422352 31Ga0265339_101553263 32Ga0318567_100504024 33Ga0364924_031309_1_108
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38. 1Ga0066694_105132671 2JGI10216J12902_1126102733 3A15PFW1_107238071 4Ga0062594_1015857481 5Ga0070711_1003161694 6Ga0070705_1000891741 7Ga0066682_104956741 8Ga0070662_1011347141 9Ga0070699_1005255963 10Ga0070732_103143121 11Ga0070704_1010760303 12Ga0066903_1060643721 13Ga0070717_104146423 14Ga0075365_110658072 15Ga0074048_126963431 16Ga0075431_1017152852 17Ga0079218_107418464 18Ga0099827_115867011 19Ga0075418_117047701 20Ga0066709_1030872941 21Ga0111538_115312691 22Ga0126307_114079491 23Ga0105067_10254913 24Ga0126309_103373533 25Ga0134082_103422471 26Ga0126376_116061391 27Ga0137383_106707093 28Ga0137378_111299022 29Ga0137386_108851541 30Ga0137371_108176863 31Ga0136611_102746551 32Ga0157298_102814732 33Ga0164298_107518532 34Ga0164299_107482482 35Ga0164301_118569011 36Ga0163162_104430861 37Ga0182007_102415801 38Ga0132257_1018587692 39Ga0134069_13258392 40Ga0187809_102265753 41Ga0184634_104742161 42Ga0184618_103975551 43Ga0184624_104818292 44Ga0190275_130707032 45Ga0206356_105008912 46Ga0193698_10502051 47Ga0224512_101975831 48Ga0247668_11201031 49Ga0209519_103132261 50Ga0209341_106709381 51Ga0207695_106944013 52Ga0207667_102900604 53Ga0247684_10188541 54Ga0265326_102422352 55Ga0307285_101855702 56Ga0265338_112018662 57Ga0307296_106463322 58Ga0307277_103585561 59Ga0307498_104847451 60Ga0265339_101553263 61Ga0318574_109274712 62Ga0310813_109703432 63Ga0307469_120730452 64Ga0318567_100504024 65Ga0318563_102235533 66Ga0318518_102578733 67Ga0315287_117031551 68Ga0364924_031309_1_108
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.40% β-sheet: 8.96% Coil/Unstructured: 71.64%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF14489	QueF	82.61
PF00067	p450	5.22
PF02746	MR_MLE_N	0.87
PF05014	Nuc_deoxyrib_tr	0.87
PF07883	Cupin_2	0.87
PF08279	HTH_11	0.87
PF12840	HTH_20	0.87
PF08327	AHSA1	0.87
PF01227	GTP_cyclohydroI	0.87
PF13365	Trypsin_2	0.87

Showing 1 to 10 of 12 entries

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COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2124	Cytochrome P450	Defense mechanisms [V]	5.22
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.74
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.87
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.87
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.87
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.87
COG3613	Nucleoside 2-deoxyribosyltransferase	Nucleotide transport and metabolism [F]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.09 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	54.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.61 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.83 %
Unclassified	root	N/A	0.00 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.61 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.61 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.87 %
Unclassified	root	N/A	0.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.61 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.87 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.61 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.87 %
Unclassified	root	N/A	0.00 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01BSJ6O	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300000956\|JGI10216J12902_112610273	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300000956\|JGI10216J12902_115610911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300001534\|A15PFW1_10723807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300005093\|Ga0062594_101585748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300005334\|Ga0068869_100356730	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300005338\|Ga0068868_102114643	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005338\|Ga0068868_102285694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300005343\|Ga0070687_101127471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300005439\|Ga0070711_100316169	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M

Showing 1 to 10 of 115 entries

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Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.87%
Environmental	Environmental	73.91%
Host-Associated	Host-Associated	25.22%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	8.70%
Plants	Host-Associated → Plants	25.22%
Solid Waste	Engineered → Solid Waste	0.87%
Terrestrial	Environmental → Terrestrial	65.22%

Habitat	Taxonomy	Distribution
Floodplain	Environmental → Terrestrial → Floodplain	0.87%
Freshwater	Environmental → Aquatic → Freshwater	5.22%
Grass	Engineered → Solid Waste → Grass	0.87%
Marine	Environmental → Aquatic → Marine	0.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.04%
Roots	Host-Associated → Plants → Roots	1.74%
Sediment	Environmental → Aquatic → Sediment	2.61%
Soil	Environmental → Terrestrial → Soil	64.35%

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.87%
Clay	Environmental → Terrestrial → Soil → Clay	0.87%
Composting	Engineered → Solid Waste → Grass → Composting	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.70%
Ice	Environmental → Aquatic → Freshwater → Ice	0.87%
Lake	Environmental → Aquatic → Freshwater → Lake	3.48%
Loam	Environmental → Terrestrial → Soil → Loam	9.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%
Sand	Environmental → Terrestrial → Soil → Sand	1.74%
Sediment	Environmental → Aquatic → Marine → Sediment	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.22%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.61%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.87%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.61%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.87%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.48%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.09%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M

Showing 1 to 10 of 108 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_03192830	2170459017	Switchgrass, Maize And Mischanthus Litter	MTEARGRVYLAGPPYAEEYRRRAEALVRELGWEPVDPMRRD
JGI10216J12902_1126102733	3300000956	Soil	VPRVYLAGPPFADDYRRRAETLVREAGWEPVDPMRRDFRG
JGI10216J12902_1156109112	3300000956	Soil	MRIYLAGPPFAEEYRRRASALVRAAGWEPVDPMRR
A15PFW1_107238071	3300001534	Permafrost	VPRVYLAGPPFADEYRVRASELARAAGWEPVDPMRRDFRGGAESH
Ga0062594_1015857481	3300005093	Soil	VRRIYLAGPPFAEEYRRRAAALVTAHGCEPVDPMRRDFRGRTEGNE
Ga0068869_1003567303	3300005334	Miscanthus Rhizosphere	VRRIYLAGPPFAEEYRRRAAALVTAHGCEPVDPMRRDFRGRTE
Ga0068868_1021146432	3300005338	Miscanthus Rhizosphere	VRRVYLAGPPFAEEYRRRAAELLAAAGCEPVDPMRRDFRGNTVGHEA
Ga0068868_1022856942	3300005338	Miscanthus Rhizosphere	VPRVYLAGPPFAEEYRRRAVALAEAAGWEPVDPMRRDFRGHTQGH
Ga0070687_1011274711	3300005343	Switchgrass Rhizosphere	VRRIYLAGPPFAEEYRRRASALVSARGCEPVDPMRRDFRGRTE
Ga0070711_1003161694	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VPRVYLAGPPFSDEYRKRAVALCREHGWETVDPMRRDFRGAT
Ga0070705_1000891741	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VRRVYLAGPPFAEEYRRRASELLVAAGCEPVDPMRRDFRGRTE
Ga0066682_104956741	3300005450	Soil	VLRVYVAGPPFAEEYRRRASTLLRAAGLEPVDPMRRDFRGR
Ga0070678_1019519501	3300005456	Miscanthus Rhizosphere	MPTYSRRVPRVYLAGPPFAEEYRRRAVALAEAAGWEPVDPMRRDFRG
Ga0070662_1011347141	3300005457	Corn Rhizosphere	MTGKRVYLAGPPFADEYRRRASALLEAASCMPVDPMRRDFRGRT
Ga0070699_1005255963	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLRVYLAGPPRADEYRRQATELVRARGWEPVDPMRRDFRGRTEGN
Ga0073909_105136561	3300005526	Surface Soil	VSRVYLAGPPFADEYRRRAAALAEAAGWEPVDPMRRDF
Ga0070679_1006305531	3300005530	Corn Rhizosphere	VPRVYLAGPPFADEYRLRASALALAAGWEPVDPMRRDFRG
Ga0070732_103143121	3300005542	Surface Soil	VKRVYLAGPPDADDYRRRASELVRTRGWEPVDPMRRDFRGRTEGNER
Ga0070704_1010760303	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAGRVYLAGPPFAEEYRRRAAALLREAGVEPVDPMRRDFRGNTTGHES
Ga0066699_102557194	3300005561	Soil	MPQQPKERRVYLAGPPYAEEYRRRAEGLVRALGWEPVD
Ga0066694_105132671	3300005574	Soil	VPRVYLAGPPFADEYRRRASALLREAGWEPVDPMRRDFR
Ga0068854_1012767261	3300005578	Corn Rhizosphere	VPRVYLAGPPFAEEYRRRAVALAKAAGWEPVDPMRRDFRG
Ga0068864_1015108113	3300005618	Switchgrass Rhizosphere	MRVYLAGPPFADEYRSRADALVRAAGWEPVDPMRRD
Ga0066903_1060643721	3300005764	Tropical Forest Soil	VTRVYLAGPPFAEEYRRRAAVLLADAGLEPVDPMRR
Ga0068870_104997951	3300005840	Miscanthus Rhizosphere	VTRVYLAGPPFADEYRRRASELLLAAGCEPVDPMRRDFR
Ga0068862_1005574854	3300005844	Switchgrass Rhizosphere	MRIYLAGPPFADEYRRRADALVRAAGWEPVDPMRRD
Ga0070717_104146423	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTAYCSRVRRVYLAGPPFADEYRRRAVRLAHDAGWEPVDPMRRDFRGAT
Ga0075365_110658072	3300006038	Populus Endosphere	MKRAYLAGPPYAEEYRRRADSLLRAAGWEPVDPLRRDFRGRTEG
Ga0066652_1002424381	3300006046	Soil	VPRVYLAGPPFADEYRRRARELVRELGWEPVDPMRRDFR
Ga0070712_1010364541	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKRIYLAGPPFAEEYRRRASALIAARGCEPVDPMRRDFRGGTEG
Ga0068871_1013001412	3300006358	Miscanthus Rhizosphere	VKRIYLAGPPFAEEYRRRASALIAARGCEPVDPMRRDFR
Ga0074048_126963431	3300006581	Soil	MAGRRVYLAGPPYADEYQRRAAELAAARGWEPVDPMRRD
Ga0075431_1017152852	3300006847	Populus Rhizosphere	VRVYLAGPPYAEEYRRRAAQLLDAAGIEAVDPMRRDFRGAT
Ga0079218_107418464	3300007004	Agricultural Soil	VRIYLAGPPFADEYRRRAAELVRGRGWEPIDPMRRDFRGRTA
Ga0099827_115867011	3300009090	Vadose Zone Soil	MMDAGGSGGRPLRRVYLAGPPYAEEYRRRAAALVRRSGWEPVDPMRRD
Ga0075418_117047701	3300009100	Populus Rhizosphere	MMEARGRVYLAGPPYAEEYRRRADALVRRLGWEPVDPMRRDF
Ga0066709_1030872941	3300009137	Grasslands Soil	VARVYLAGPPFADEYRRRASRLLEEAGQQPVDPMRRDFR
Ga0114129_129919752	3300009147	Populus Rhizosphere	MRVYLAGPPFAEEYRRRAAELLRERGHEPVDPMRRDFRGRTAGNEVE
Ga0111538_115312691	3300009156	Populus Rhizosphere	MGLLYAAMRVYLAGPPASDEYRRRADELVRAAGWEPVDPFRRDFR
Ga0105248_104143591	3300009177	Switchgrass Rhizosphere	VKRVYLAGPPFAEEYRRRAAALVTAHGCEPVDPMRRDFRGRTEGNE
Ga0126307_114079491	3300009789	Serpentine Soil	MARTLRPVKRVYLAGPPYAEEYRRRAGELVRAAGLEPVDPMRRDYR
Ga0105067_10254913	3300009812	Groundwater Sand	MGDGVRRVYLAGPPYADEYRRRADRLVRQAGWEPVDPMRRDFRGRTQ
Ga0105067_10695362	3300009812	Groundwater Sand	VRRVYLAGPPYADEYRRRAAALVREIGWEPVDPMR
Ga0126309_103373533	3300010039	Serpentine Soil	VRRVYLAGPPWAEEFRRRATELVRGRGWEPVDPMR
Ga0126306_105841603	3300010166	Serpentine Soil	VYLAGPPWAEEYRRRATELVRARGWEPVDPMRRDFRGNT
Ga0134082_103422471	3300010303	Grasslands Soil	MKRVYLAGPPFADEYRRSAIALVRELGWEPVDPMRRDF
Ga0126376_116061391	3300010359	Tropical Forest Soil	VRRVYLAGPPFADEYRRRAAALVQELGWEAVDPMRRDFRG
Ga0134127_102020331	3300010399	Terrestrial Soil	VRRIYLAGPPFAEEYRRRAAELLAAAGCEPVDPMRRDFRGHT
Ga0134127_107469773	3300010399	Terrestrial Soil	VPVTGPYSRPVQRVYLAGPPFAEEYRRRAEQLLRERGLEPVDPM
Ga0137383_106707093	3300012199	Vadose Zone Soil	MPQQQEARRVYLAGPPYAEEYRRRAETLVRALGWEPIDPMRRDYRGRT
Ga0137378_111299022	3300012210	Vadose Zone Soil	VPRVYLAGPPFADDYRRRATQLVRELEWEPVDPMRRDFRG
Ga0137386_108851541	3300012351	Vadose Zone Soil	MTRRVYLAGQSYADNYRRRAQALVRAAGWEPVDPM
Ga0137371_108176863	3300012356	Vadose Zone Soil	MLKLYAEMRVYLAGPPFAEEYRRRAAELIREAGWEPV
Ga0137390_109154163	3300012363	Vadose Zone Soil	MPRVYLAGPPFADEYRVRASALALAAGWEPVDPMRR
Ga0157216_100948314	3300012668	Glacier Forefield Soil	MRVYLAGPPYAEEYRRRADALVRAAGWEPVDPMRRDFRGRTEGH
Ga0136611_102746551	3300012682	Polar Desert Sand	MRVYLAGPPFAEEYRRRAEALVRAAGWEPVDPMRRDFRGRTE
Ga0157298_102814732	3300012913	Soil	MPSVYLAGPPFAEEYRRRATVLVEALGWEPIDPMRRDFRGRTQ
Ga0164300_103893293	3300012951	Soil	VKRIYLAGPPFAEEYRRRASALIAARGCEPVDPMR
Ga0164300_104945521	3300012951	Soil	VRRIYLAGPPFAEEYRRRAAELVGARGCEPVDPMRRDFRGN
Ga0164298_107518532	3300012955	Soil	VRRIYLAGPPFAEEYRRRAAELLSAQGCEPVDPMRRDFRG
Ga0164299_107482482	3300012958	Soil	LRVYLAGPPFADEYRRRAVDLLLAAGCEPVDPMRRDF
Ga0164301_118569011	3300012960	Soil	MPTYSRRVPRVYLAGPPFADEYRRRAVALAEAAGWEPVDPMRRDFR
Ga0164305_120424951	3300012989	Soil	MAGRRIYLAGPPYAEEYRRRAAGLVATRGWEPVDPMRRD
Ga0157371_104545611	3300013102	Corn Rhizosphere	VRRIYLAGPPFAEEYRRRAAALVTAHGCEPVDPMRRD
Ga0163162_104430861	3300013306	Switchgrass Rhizosphere	VRRIYLAGPPFAEEYRRRATELLIGAGCEPVDPMCRDFRGRTEGHEA
Ga0120158_100425196	3300013772	Permafrost	VYLAGPPFAEEYRRRADALVRAIGWEPVDPMRRDFRGMTVGNEHE
Ga0120158_104855472	3300013772	Permafrost	VRRVYLAGPPFADEYRRRADALARAAGWEPVDPMRRDFRGATVGHE
Ga0182007_102415801	3300015262	Rhizosphere	VKRVYLAGPPFADEYRVRASALLEAAGLEAVDPMR
Ga0132257_1018587692	3300015373	Arabidopsis Rhizosphere	MAGRKIYLAGPPYAEEYRRRAAELVATRGWEPVDPMRRDFRGSTQDK
Ga0134069_13258392	3300017654	Grasslands Soil	MRVYLAGPPSADDYRRRAIELVRELGWEPVDPFRRDFRGR
Ga0187809_102265753	3300017937	Freshwater Sediment	VPRVYLAGPPFADEYRRRADELVRMRGWEPVDPMRRDFRGATE
Ga0184634_104742161	3300018031	Groundwater Sediment	VKRVYLAGPPYADEYRRRADALVRRIGWEPIDPMRRDFR
Ga0184618_103975551	3300018071	Groundwater Sediment	VKRVYLAGPPFAEEYRRRAEELLREAGLEPVDPMRRDYRGRTE
Ga0184624_104818292	3300018073	Groundwater Sediment	VRRVYLAGPPFADEYRRRATVLVREHGAEPVDPMRRDFRGG
Ga0190275_130707032	3300018432	Soil	VRRVYLAGPPYADEYRRRATRLLEQRGLEPLDPMRRDFRGRTEGHE
Ga0206356_105008912	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VKRIYLAGPPFAEEYRRRASALIAARGCEPVDPMRRDFRGG
Ga0179594_102127533	3300020170	Vadose Zone Soil	MSRVYLAGPPYAEEYRRRADALVRELGWEPVDPMRR
Ga0193698_10502051	3300021968	Soil	LRRIYLAGPPFAEEYRRRASELVSARGCEPVDPMRRDFRGRTE
Ga0224512_101975831	3300022226	Sediment	MKRVYLAGPPYAEEYRRRATALARNANWEAVDPMRRDFRGRTSGH
Ga0247686_10498511	3300024177	Soil	VTRVYLAGPPFAEEYRRRASELLVAAGCEPVDPMRRDF
Ga0247692_10541133	3300024279	Soil	VPRVYLAGPPFADEYRVRASALAAAAGWEPVDPMRRDFRGGTQ
Ga0247668_11201031	3300024331	Soil	MGQTLRVKRVYLAGPPFADDYRRRAMELLRARGYEPID
Ga0209519_103132261	3300025318	Soil	MRRVYLAGPPYAEEYRRRAEALLREAGCEPVDPMRRD
Ga0209341_106709381	3300025325	Soil	MSQSSKRGAVRSVYLAGPPYADEYRSRAAKLVREIGWEPVDPMRHDYR
Ga0207707_110068151	3300025912	Corn Rhizosphere	VKRVYLAGPPFAEEYRRRASELLVAAGCEPVDPMRRDFRGRTE
Ga0207695_106944013	3300025913	Corn Rhizosphere	MPRVYLAGPPFADEYRVRAAALAVAAGWEPVDPMRRDFRSGT
Ga0207709_116242272	3300025935	Miscanthus Rhizosphere	VRRIYLAGPPFAEEYRRRAAALVTAQGCEPVDPMCRDFRGR
Ga0207679_114279531	3300025945	Corn Rhizosphere	VKRIYLAGPPFAEEYRRRASALIAARGCEPVDPMRRDF
Ga0207667_102900604	3300025949	Corn Rhizosphere	VPRVYLAGPPFADDYRRRATALVTELGWEPVDPMRRDYRGRTEGNEA
Ga0207678_103529163	3300026067	Corn Rhizosphere	VRRIYLAGPPFAEEYRRRASALVSARGCEPVDPMRRDFR
Ga0207641_102839601	3300026088	Switchgrass Rhizosphere	VRRIYLAGPPFAEEYRRRASSLVSARGCEPVDPMRRDFRGR
Ga0247684_10188541	3300028138	Soil	VTRVYLAGPPFADEYRRRASELLLSAGCEPVDPMRRDFRGGTEGHE
Ga0265326_102422352	3300028558	Rhizosphere	VTVALRVYVAGPPFAEEYRRRATELVRERGWEPVDPMRRDFR
Ga0247828_111728051	3300028587	Soil	MRVYLAGPPFAEEYRRRAAAQMRAAGWEPVDPMRRDFRGAT
Ga0307285_101855702	3300028712	Soil	VKRVYLAGPPFADEYRRRAAELLLARGCEPVDPMRRDFRGRTEGNEA
Ga0307303_101044401	3300028713	Soil	VRRVYLAGPPFADEYRVRATALVQEHGGEPVDPMRR
Ga0307297_100709153	3300028754	Soil	VRRIYLAGPPFAEEYRRRASELVSAHGCEPVDPMRRDYRGNTVGTE
Ga0265338_112018662	3300028800	Rhizosphere	MQRIYLAGPPYANEYRRRASELLRERGLEPVDPMRRDFRGRTEGNER
Ga0307305_100432984	3300028807	Soil	VPRVYLAGPPFADDYRRRAAELVRELGWEPVDPMRRDFRGRTEG
Ga0307296_106463322	3300028819	Soil	VYLAGPPYAEEYRRRATELCEAAGWEVVDPMRRDFRG
Ga0307277_103585561	3300028881	Soil	VPRVYLAGPPFADEYRIRASALALAAGWEPVNPMRRDFRA
Ga0307498_104847451	3300031170	Soil	VRRVYLAGPPFADEYRRRATALVQERGGEPIDPMRRDFRGG
Ga0265339_101553263	3300031249	Rhizosphere	MQRIYLAGPPYADEYRRRASELLLKRGLKPVDPMRR
Ga0307373_101954253	3300031672	Soil	VSRVYLAGPPFADEYRRRAAALVREAGWEPVDPMRRDYRGRTQG
Ga0318574_109274712	3300031680	Soil	VTRIYLAGPPSADEYRRRATELIRARGFEPVNPMRRDFRGRTE
Ga0310813_109703432	3300031716	Soil	VKRIYLAGPPFAEEYRRRAVALVGERGCEPVDPMRRDFRGR
Ga0307469_120730452	3300031720	Hardwood Forest Soil	MRVYLAGPPFAEEYRRRAAELLRERGHEPVDPMRRDFRGRTVGN
Ga0318567_100504024	3300031821	Soil	MRVYLAGPPYADEYRARATELLLAAGHEPVDPMRRDFRGGTQGHEA
Ga0315274_117087071	3300031999	Sediment	VNRVYLAGPPFADEYRRRAAALVRERGWEPIDPMRRDFRGG
Ga0318563_102235533	3300032009	Soil	VSSRRVYLAGPPFADEYRRRAAELVRAHGWEPVDPMRRDFRGR
Ga0318518_102578733	3300032090	Soil	MKRVYLAGPPFAEEYRRRASALLAEAGFDPVDPMRRDF
Ga0315283_110521413	3300032164	Sediment	VNRVYLAGPPFADEYRRRAAALVRERGWEPIDPMRRDFRG
Ga0315287_100630375	3300032397	Sediment	VNRVYLAGPPFADEYRRRAAALVRERGWEPIDPMRRDFRGATQG
Ga0315287_117031551	3300032397	Sediment	VNRVYLAGPPFADEYRRRAAALVRERGWEPVDPMRRDFRGGT
Ga0364924_031309_1_108	3300033811	Sediment	MRSVYLAGPPYADEYRTRAAALVRAIGWEPVAPMRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters