Metagenome / Metatranscriptome Family F080287

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080287
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	46 residues
Representative Sequence	DAVNVLNKPQWGNPNMDINGTTFGRITTATGNRMVTLNARIDF
Number of Associated Samples	90
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.80 %
% of genes near scaffold ends (potentially truncated)	90.43 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.304 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.652 % of family members)
Environment Ontology (ENVO)	Unclassified (25.217 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.174 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00753	Lactamase_B	6.09
PF13620	CarboxypepD_reg	4.35
PF02518	HATPase_c	3.48
PF08669	GCV_T_C	1.74
PF01011	PQQ	1.74
PF12704	MacB_PCD	1.74
PF10518	TAT_signal	1.74
PF00109	ketoacyl-synt	0.87
PF05685	Uma2	0.87
PF03328	HpcH_HpaI	0.87
PF03713	DUF305	0.87
PF13899	Thioredoxin_7	0.87
PF14534	DUF4440	0.87
PF10282	Lactonase	0.87
PF05198	IF3_N	0.87
PF13366	PDDEXK_3	0.87
PF13442	Cytochrome_CBB3	0.87
PF07593	UnbV_ASPIC	0.87
PF03683	UPF0175	0.87
PF01068	DNA_ligase_A_M	0.87
PF01425	Amidase	0.87
PF12034	DUF3520	0.87
PF14559	TPR_19	0.87
PF03473	MOSC	0.87
PF02566	OsmC	0.87
PF03712	Cu2_monoox_C	0.87
PF12796	Ank_2	0.87
PF00578	AhpC-TSA	0.87
PF05598	DUF772	0.87
PF16811	TAtT	0.87
PF00034	Cytochrom_C	0.87
PF03969	AFG1_ATPase	0.87
PF04299	FMN_bind_2	0.87
PF13432	TPR_16	0.87
PF05635	23S_rRNA_IVP	0.87
PF07729	FCD	0.87
PF13191	AAA_16	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.87
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	0.87
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.87
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.87
COG1485	Cell division protein ZapE (Z ring-associated ATPase), AFG1 superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.87
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.87
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.87
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.87
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.87
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.87
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.87
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.87
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.87
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.87
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.91 %
Unclassified	root	N/A	8.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.09 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.78 %
Unclassified	root	N/A	8.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.22 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.22 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.17 %
Unclassified	root	N/A	8.70 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	2.61 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.87 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.87 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.17 %
Unclassified	root	N/A	8.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	2.61 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.87 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.17 %
Unclassified	root	N/A	8.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	2.61 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.87 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.17 %
Unclassified	root	N/A	8.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	2.61 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.87 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.17 %
Unclassified	root	N/A	8.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	2.61 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.87 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.17 %
Unclassified	root	N/A	8.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	2.61 %
Chitinophaga pinensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga pinensis	0.87 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_109530751	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300000789\|JGI1027J11758_12913506	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga → Chitinophaga pinensis	2198	Open in IMG/M
3300003267\|soilL1_10085952	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300003321\|soilH1_10213176	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300004139\|Ga0058897_11147909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2620	Open in IMG/M
3300004463\|Ga0063356_100720660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300004463\|Ga0063356_100926255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1234	Open in IMG/M
3300004633\|Ga0066395_10553750	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005338\|Ga0068868_100348553	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300005338\|Ga0068868_100775598	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005445\|Ga0070708_101976533	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005544\|Ga0070686_100544112	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005556\|Ga0066707_10431262	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005563\|Ga0068855_100841856	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300005577\|Ga0068857_100696687	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005607\|Ga0070740_10228510	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300005719\|Ga0068861_101915290	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005764\|Ga0066903_101298220	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300005764\|Ga0066903_102643367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	973	Open in IMG/M
3300005764\|Ga0066903_103772373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300005764\|Ga0066903_105660007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300005764\|Ga0066903_107937280	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005841\|Ga0068863_100652787	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300006034\|Ga0066656_10142914	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300006049\|Ga0075417_10286367	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300006175\|Ga0070712_102048508	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300006806\|Ga0079220_10258283	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1048	Open in IMG/M
3300006844\|Ga0075428_100178619	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300006852\|Ga0075433_11670217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300006852\|Ga0075433_11719158	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006871\|Ga0075434_102221499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	552	Open in IMG/M
3300006904\|Ga0075424_101956416	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300006954\|Ga0079219_10157946	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300009012\|Ga0066710_101676564	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300009090\|Ga0099827_10302247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	1354	Open in IMG/M
3300009093\|Ga0105240_10430674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1480	Open in IMG/M
3300009093\|Ga0105240_10758436	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300009094\|Ga0111539_12740114	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009100\|Ga0075418_12235205	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300009162\|Ga0075423_13046761	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009176\|Ga0105242_11783516	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300009551\|Ga0105238_10995462	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300010043\|Ga0126380_10272748	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300010043\|Ga0126380_10729307	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300010301\|Ga0134070_10412864	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010304\|Ga0134088_10008322	All Organisms → cellular organisms → Bacteria → Acidobacteria	4389	Open in IMG/M
3300010304\|Ga0134088_10369264	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010358\|Ga0126370_10191505	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300010359\|Ga0126376_13007638	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010360\|Ga0126372_10921546	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300010360\|Ga0126372_11275801	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010361\|Ga0126378_10493315	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300010361\|Ga0126378_10824614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300010361\|Ga0126378_11019066	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M
3300010361\|Ga0126378_13381781	Not Available	507	Open in IMG/M
3300010362\|Ga0126377_13065724	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300010366\|Ga0126379_13000000	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010398\|Ga0126383_10191840	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300010398\|Ga0126383_12141513	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300010403\|Ga0134123_12011212	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300010403\|Ga0134123_12551372	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300012212\|Ga0150985_117445719	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300012212\|Ga0150985_119656740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1013	Open in IMG/M
3300012469\|Ga0150984_119258902	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300012683\|Ga0137398_10816014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	652	Open in IMG/M
3300012944\|Ga0137410_10079987	All Organisms → cellular organisms → Bacteria → Acidobacteria	2388	Open in IMG/M
3300012971\|Ga0126369_10489163	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300012972\|Ga0134077_10550878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300013306\|Ga0163162_13147609	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300013308\|Ga0157375_10186092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2230	Open in IMG/M
3300014969\|Ga0157376_11702045	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300015201\|Ga0173478_10740016	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300015373\|Ga0132257_101733567	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300015374\|Ga0132255_100931011	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300015374\|Ga0132255_101721327	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300016319\|Ga0182033_12174937	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300018431\|Ga0066655_11281623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018433\|Ga0066667_11424174	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	609	Open in IMG/M
3300021404\|Ga0210389_11020022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300021475\|Ga0210392_10803992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300025165\|Ga0209108_10493282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300025324\|Ga0209640_10503881	All Organisms → cellular organisms → Bacteria → Acidobacteria	987	Open in IMG/M
3300025901\|Ga0207688_10668293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300025908\|Ga0207643_11004506	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300025916\|Ga0207663_10405188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300025923\|Ga0207681_10920179	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300025923\|Ga0207681_11690636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300025924\|Ga0207694_11132497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	662	Open in IMG/M
3300025930\|Ga0207701_10947134	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300025933\|Ga0207706_10094772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2626	Open in IMG/M
3300025944\|Ga0207661_10555963	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300025949\|Ga0207667_11418194	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300025960\|Ga0207651_12087360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	509	Open in IMG/M
3300026023\|Ga0207677_10212533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1546	Open in IMG/M
3300026075\|Ga0207708_10174056	All Organisms → cellular organisms → Bacteria → Acidobacteria	1706	Open in IMG/M
3300026075\|Ga0207708_10758013	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300026326\|Ga0209801_1116715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	1146	Open in IMG/M
3300027706\|Ga0209581_1147470	All Organisms → cellular organisms → Bacteria → Acidobacteria	768	Open in IMG/M
3300027748\|Ga0209689_1133291	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300027873\|Ga0209814_10372665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300027873\|Ga0209814_10469506	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300027882\|Ga0209590_10176502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	1340	Open in IMG/M
3300027907\|Ga0207428_10885899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300031231\|Ga0170824_116511245	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031720\|Ga0307469_11558396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	634	Open in IMG/M
3300031965\|Ga0326597_10835878	Not Available	950	Open in IMG/M
3300032001\|Ga0306922_10693141	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.26%
Host-Associated	Host-Associated	41.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.26%
Plants	Host-Associated → Plants	41.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.74%
Loam	Environmental → Terrestrial → Soil → Loam	13.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.35%
Sand	Environmental → Terrestrial → Soil → Sand	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.87%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009793	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1095307512	3300000559	Soil	GEAKSFKMRADVVNIWNTPQWGNPNSDINSSSFGRITTATGARSFIVNARVSF*
JGI1027J11758_129135063	3300000789	Soil	LNKPQWGTPNTNINGTTFGRITSVVGNVQRLVTLNARIDF*
soilL1_100859521	3300003267	Sugarcane Root And Bulk Soil	MRADVVNILNTPQWANPNMDINSGSFGRITSATGTRTVTLNARIDF*
soilH1_102131761	3300003321	Sugarcane Root And Bulk Soil	RADAVNVLNRAQWGNPSTNLNGTTFGRITSVVGNIQRVVTLNARIDF*
Ga0058897_111479091	3300004139	Forest Soil	GFLNKPIWGNPVTDINSATFGRITNASGARTVTLNARVDF*
Ga0063356_1007206602	3300004463	Arabidopsis Thaliana Rhizosphere	ADAINILNKPQWGLPSTNINSTTFGRITTATGSRTVLVNARVDF*
Ga0063356_1009262551	3300004463	Arabidopsis Thaliana Rhizosphere	TIRGDVVNILNSPQWGNPNTDINSSSFGRITSATGTRTVTMNARIEF*
Ga0066395_105537502	3300004633	Tropical Forest Soil	FTLRVDAVNILNITQWGNPNVQVNGATFGRITTVVGANNPQRTVTLNARFDF*
Ga0068868_1003485532	3300005338	Miscanthus Rhizosphere	LLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF*
Ga0068868_1007755982	3300005338	Miscanthus Rhizosphere	ADAVNVLNKPIWGNPNTDINSNSFGRITTAVGSRTVTISGRVDF*
Ga0070708_1019765332	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TIFTMRADAINLLNKPQWGLPDTNINSGTFGRITTATGSRTILLNARVDF*
Ga0070686_1005441122	3300005544	Switchgrass Rhizosphere	SIRADAVNFLNTPVWGNPTTNINSTNFGKITTAGGARTITLSARIDF*
Ga0066707_104312621	3300005556	Soil	DAINVLNRPNWGAPSTNVNSASFGRITTATGNRTITFNARLDF*
Ga0068855_1008418561	3300005563	Corn Rhizosphere	RTKMTVRADIINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNLRIDF*
Ga0068857_1006966871	3300005577	Corn Rhizosphere	KTFTLRADVVNVLNKPQWNNPNTNINGATFGRITTVVGNAQRLVTFNARIDF*
Ga0070740_102285102	3300005607	Surface Soil	KPQWGNPNTNINSTSFGRITTATGSRTVVVNGRFDF*
Ga0068861_1019152901	3300005719	Switchgrass Rhizosphere	DAINMLNKAQWGPPDTNINSGTFGRITTATGSRTILLNARVDF*
Ga0066903_1012982201	3300005764	Tropical Forest Soil	DAVNVLNKPQWGNPNMDINGTTFGRITTATGNRMVTLNARLDF*
Ga0066903_1026433672	3300005764	Tropical Forest Soil	IKENVRFTMRVDAINALNRPQWGNPNTDYNSAAFGRITDATGARTITFNSRIDF*
Ga0066903_1037723731	3300005764	Tropical Forest Soil	DAVNFLNKPMWADPVTDINSTTFGRITSAGGARMVTLNARVDF*
Ga0066903_1056600072	3300005764	Tropical Forest Soil	DAVNVLNKPQWGNPNMDINGTTFGRITTATGNRMVTLNARIDF*
Ga0066903_1079372801	3300005764	Tropical Forest Soil	AVNVLNRPMWDIPNTDINSANFGRITTATGTRTIVINARVDF*
Ga0068863_1006527873	3300005841	Switchgrass Rhizosphere	IRADAVNFLNTPVWGNPTTNINSTNFGKITTAGGARTITISARIDF*
Ga0066656_101429141	3300006034	Soil	KSFTIRADAVNVLNRPVWGNPNTDINSNGFGRITTATGSRTITVGARVDF*
Ga0075417_102863671	3300006049	Populus Rhizosphere	NPSVNVNGSTFGRITTVVGNAPFQRQVTLTARIDF*
Ga0075417_102974613	3300006049	Populus Rhizosphere	VQVTEGIRFTIRADAINILNKPQWGAPITDINNPDFGLITQATGSRTITINARIDF*
Ga0070712_1020485082	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ADAVNVLNKPQWGNPNTSINGTTFGRITAAGGARTVTLNARIDF*
Ga0079220_102582832	3300006806	Agricultural Soil	VFRFRETKTFTVRADAINLLNKPQWGLPNTSINSTSFGQITTATGTRTITFNARIDF*
Ga0075428_1001786191	3300006844	Populus Rhizosphere	NKPQWGNPNTNINGTTFGRITSVVGNAQRLVTLNARIDF*
Ga0075433_114704562	3300006852	Populus Rhizosphere	PVWDNPNTDINSTTFGRITQHPTTTTGARTITINVRIDF*
Ga0075433_116702171	3300006852	Populus Rhizosphere	IRADAVNALNRPIWGNPNTNINSANFGRITTATGARTITISARLDF*
Ga0075433_117191581	3300006852	Populus Rhizosphere	MIRADAVNVLNHTVWGPPNPDINSASFGRITTATGARRIT
Ga0075434_1022214992	3300006871	Populus Rhizosphere	MALTKKVRISEGKTFSLRADAANVLNKPIWGNPNTNINSTSFGRITTATGART
Ga0075424_1019564161	3300006904	Populus Rhizosphere	LNKPQWGNPTLDINSLNFGRITTAAGSRTFTVNARVNF*
Ga0079219_101579461	3300006954	Agricultural Soil	TITERTKVTLRADVINLLNKPQWGNPVTDINSASFGRINSATGNRTVTFNLRIDF*
Ga0075435_1014870012	3300007076	Populus Rhizosphere	DNPNTDINSTSFGRITQHPLNTTGARTITINARIDF*
Ga0066710_1016765641	3300009012	Grasslands Soil	ESKTFTLRADVVNVLNRPQWGDPNTNINGSTFGRITTVVGNAQRLVTLNARIDF
Ga0099827_103022472	3300009090	Vadose Zone Soil	SEKTIFTLRADAINVLNKPQWGLPNTNINSAMFGRITTAMGSRMILLNGRVDF*
Ga0105240_104306743	3300009093	Corn Rhizosphere	ADVINLLNIPQSGNPTTDINSASFGRINSATGNRTVTFNLRIDF*
Ga0105240_107584362	3300009093	Corn Rhizosphere	KPQWGNPTTDINSASFGRINTATGNRTITLNVRVDF*
Ga0111539_127401141	3300009094	Populus Rhizosphere	TSFTLRADAVNVLNKPQWGNPNMNINSASFGRITTATGARQITINLRLDF*
Ga0075418_108345621	3300009100	Populus Rhizosphere	WDDPETDINSANFGRITDVRNGTTRTITINARIDF*
Ga0075418_122352051	3300009100	Populus Rhizosphere	QKRVQVREGTSFTLRADAVNVLNKPQWGNPNMNINSASFGRITTATGARQITINLRLDF*
Ga0111538_120212262	3300009156	Populus Rhizosphere	WDNPNTDINSASFGRITQHPTNTTGARTITINARIDF*
Ga0075423_120665942	3300009162	Populus Rhizosphere	PGRLGLDMALMKRVQVTEGIRFTIRADAINILNKPQWGAPITDINNPDFGLITQATGSRTITINARIDF*
Ga0075423_130467612	3300009162	Populus Rhizosphere	MAESRTIEIRADAVNALNRPVWGNPNLNINSANFGRITTATGARSITINLRVDF*
Ga0105242_117835162	3300009176	Miscanthus Rhizosphere	ADVINLMNKPQWGNPVTDINSASFGRINTATGNRTVTFNVRLDF*
Ga0105238_109954621	3300009551	Corn Rhizosphere	TVRADIINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF*
Ga0105077_1154022	3300009793	Groundwater Sand	LNRPIWDNPNTDINSASFGRITGHPANTGARTITINARIDF*
Ga0126380_102727481	3300010043	Tropical Forest Soil	AVNVLNRPVWDNPNTDINSASFGRITQHPMNPTITGARTITINARIDF*
Ga0126380_107293071	3300010043	Tropical Forest Soil	SEGKTFTLRADAVNVLNKPQWGNPNMDINGTTFGRITTATGNRMVTLNARIDF*
Ga0126382_110342982	3300010047	Tropical Forest Soil	DSPTAANMDINSNSFGRITTATGSRTITINARIDF*
Ga0134070_104128641	3300010301	Grasslands Soil	NRPIWGNPNMNINSATFGRITTATGNRTITFNARIDF*
Ga0134088_100083226	3300010304	Grasslands Soil	GENKLFTLRTDAINVLNRPIWGNPNMNINSATFGRITTALGNRTITFNARVDF*
Ga0134088_103692642	3300010304	Grasslands Soil	LNHPVWGDPNTDINSSLFGRITTATGSRTITLNARIDF*
Ga0126370_101915053	3300010358	Tropical Forest Soil	QISVFNKPQWGLPNTYINLATFGRITTATGARTVTLNARVDF*
Ga0126376_130076381	3300010359	Tropical Forest Soil	FTLRADAVNVLNKAQFGNPNVDINNVNFGRITTSSGNRMITFNARIDF*
Ga0126372_109215461	3300010360	Tropical Forest Soil	LGIDAANVLNKPQWGNPSVNVNGSTFGRITTVVGNAPFQRQVTLTARIDF*
Ga0126372_112758011	3300010360	Tropical Forest Soil	PQWGNPNVYINGSTFGRITTVVGDQQRLVTLNARIDF*
Ga0126378_104933152	3300010361	Tropical Forest Soil	LNKPQWGNPSVNVNGSTFGRITTVVGNAPFQRQVILTARIDF*
Ga0126378_108246143	3300010361	Tropical Forest Soil	PIFGNPNTNINSTSFGRITGLSTIGYPSRLVVLQGRLYF*
Ga0126378_110190662	3300010361	Tropical Forest Soil	TIRADAVNVLNRPIWDIPNTDINADNFGRITTATGTRTIVINARVDF*
Ga0126378_133817812	3300010361	Tropical Forest Soil	VLNKPQWGNPNMDINGTTFGRITTATGNRMVTLNARIDF*
Ga0126377_130657241	3300010362	Tropical Forest Soil	KPQWGNPSVNVNGATFGRITTVVGNVQRLVTLNARIDF*
Ga0126379_130000001	3300010366	Tropical Forest Soil	NRTQWGNPSTNINGTTFGRITSATGARTVTLNARIDF*
Ga0126383_101918401	3300010398	Tropical Forest Soil	KTQWGNPSANVNGTTFGNITSVIGNVGRLVTLNARIDF*
Ga0126383_121415131	3300010398	Tropical Forest Soil	AIRADAVNILNKPIWGNPSTNFNGANFGRITTAGGSRTVTLEGRIDF*
Ga0134123_120112122	3300010403	Terrestrial Soil	LQKRVQVREGTSFTLRADAVNVLNKPQWGSPNMNINSASFGRITTATGARQITINLRLDF
Ga0134123_125513722	3300010403	Terrestrial Soil	EGKTFAIRADAVNILNRPVWGNPSTNFNGANFGRITTAGGNRTVTLEARIDF*
Ga0150985_1174457193	3300012212	Avena Fatua Rhizosphere	RADIINVLNKPQWGNPVTDINSASFGRINAATGNRTVTFNARIDF*
Ga0150985_1196567403	3300012212	Avena Fatua Rhizosphere	LNKPQWGLPNTNINSTTFGRITTATGSRTILMNARVDF*
Ga0150984_1192589021	3300012469	Avena Fatua Rhizosphere	ADAINILNKPQWGLPNTNINSTTFGRITAATGSRAVLLGARVDF*
Ga0137398_108160142	3300012683	Vadose Zone Soil	IGEGKSFTIRADAINALNRPVWGNPNTNINSTLFGRITSATGNRTITFSSRLDF*
Ga0137410_100799872	3300012944	Vadose Zone Soil	AINVLNKPQWGLPNTNINSAMFGRITTATGSRMILLNGRVDF*
Ga0126369_104891633	3300012971	Tropical Forest Soil	RTRLAARTTFTIRADAVNVLNRPMWDIPNTDINSDTFGRITTATGTRTIVINARVDF*
Ga0134077_105508782	3300012972	Grasslands Soil	FTIRADAVNVLNRPIWDNPTAANMDINSPSFGRITTAGGARTITLNARIDF*
Ga0163162_131476092	3300013306	Switchgrass Rhizosphere	TERTKMTVRADVINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF*
Ga0157375_101860923	3300013308	Miscanthus Rhizosphere	RADVINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF*
Ga0157376_117020451	3300014969	Miscanthus Rhizosphere	TITERTKLTLRADIINLLNKPQWGNPTTDINSTSFGRINSATGNRTVTFNLRLDF*
Ga0173478_107400162	3300015201	Soil	VNVLNKPQWNNPNTNINGATFGRITSVVGNQQRLVTFNARIDF*
Ga0132257_1017335672	3300015373	Arabidopsis Rhizosphere	ADAVNVLNRPIWDNPNTDINSATFGRITSATGTRTITMNARIDF*
Ga0132255_1009310112	3300015374	Arabidopsis Rhizosphere	FTLRADAINILNKPQWGLPDTNINSTSFGRITTATGSRTILINARVDF*
Ga0132255_1017213271	3300015374	Arabidopsis Rhizosphere	MTQFSNPNVNVNGATFGRITTVVGGNNPQRQVTLNARFDF*
Ga0182033_121749372	3300016319	Soil	NKPQWGNPNTNINSTSFGRITTATGSRTVVLNGRLDF
Ga0066655_112816231	3300018431	Grasslands Soil	RADVVNVLNKPQWGNPNTNINGSTFGRITTVVGNAQRLVTLNARIDF
Ga0066667_114241741	3300018433	Grasslands Soil	FTLRADAINMLNKPQWGLPNTNINSSTFGRITTAMGSRTVVLNARVDF
Ga0210389_110200221	3300021404	Soil	FNMAATKSVKISEGKTFTLRADAVNVLNKPQWGAPTASFNGTSFGRITSALGNRTVTLDARIDF
Ga0210392_108039921	3300021475	Soil	RADAVNVLNRTQWGNPSTNVNGTTFGRITSVVGNVGRLVTLNARIEF
Ga0209108_104932822	3300025165	Soil	LNTPQWGNPNTSIDSASFGRITSAGGTRSVTLSARFDF
Ga0209640_105038811	3300025324	Soil	DLLNKPQWGNPNTDINSQNFGRITQSAGNRTITLTARFDF
Ga0207688_106682931	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	EGLSFTLRADAVNVLNKPQWGAPNMNINSSSFGRITTATGARTITINARVDF
Ga0207643_110045062	3300025908	Miscanthus Rhizosphere	KPQWGNPSTNFNGANFGRITTAIGSRTVTLEARIDF
Ga0207663_104051881	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LLNKPQWGNPTTDINSASFGRINSASGNRTVTFNLRIDF
Ga0207681_109201792	3300025923	Switchgrass Rhizosphere	VLNTPVWGNPNTDINSNAFGRITTATGARTITLSGRIDF
Ga0207681_116906362	3300025923	Switchgrass Rhizosphere	ARSFTIRADAVNVLNTPVWGNPNTDINSNSFGRITTATGARTVTVSARIDF
Ga0207694_111324972	3300025924	Corn Rhizosphere	LLNKPQWGNPVTDINSASFGRISAASGNRTVTFNARIDF
Ga0207701_109471341	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RGDAVNVLNKPQWGAPNMNINSASFGRITTATGARTITINARIDF
Ga0207706_100947721	3300025933	Corn Rhizosphere	RADIINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF
Ga0207661_105559632	3300025944	Corn Rhizosphere	TVRADIINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF
Ga0207667_114181941	3300025949	Corn Rhizosphere	KTKVTLRADVINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNLRIDF
Ga0207651_120873601	3300025960	Switchgrass Rhizosphere	NAAAGKAFTLTERMKMTMRFDIINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF
Ga0207677_102125333	3300026023	Miscanthus Rhizosphere	MTMRFDIINLLNKPQWGNPTTDINSASFGRINSATGNRTVTFNARIDF
Ga0207708_101740562	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LCEQRFVEIRADAINALNRPVWGNPSTNINSANFGRITAASGARTITFSARVDF
Ga0207708_107580131	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	IRADAVNALNRPMWGTPNTNINSANFGRITTATGARTITFSARLDF
Ga0209801_11167152	3300026326	Soil	RISEKTIFTLRADAINVLNKPQWGLPNTNINSAMFGRITTAMGSRMILLNGRVDF
Ga0209581_11474702	3300027706	Surface Soil	KPQWGNPNTNINSTSFGRITTATGSRTVVVNGRFDF
Ga0209689_11332912	3300027748	Soil	RADAINLLNTPQWDIPNTDINSPSFGRITKERVPGSRTILLNARVDF
Ga0209814_103726651	3300027873	Populus Rhizosphere	NILNITQWSNPNVNVNGATFGRITTVVGANNPQRTVTLNARFDF
Ga0209814_104695061	3300027873	Populus Rhizosphere	ADAINILNKPQWGAPITDINNPDFGLITQATGSRTITINARIDF
Ga0209590_101765021	3300027882	Vadose Zone Soil	SFTLRGDAVNVLNKPQWGLPNTNINSAMFGRITTAMGSRMILLNGRVDF
Ga0207428_108858991	3300027907	Populus Rhizosphere	PVWGNPNTDINSNAFGRITTATGARTITLSGRIDF
Ga0170824_1165112451	3300031231	Forest Soil	LNSPQWGYSLQAGGPVTDINNPNFGLITAAGGARTITINARIDF
Ga0307469_115583962	3300031720	Hardwood Forest Soil	TKLTFRADVINLLNKPQWGNPTTDINSASFGRINTATGNRTVTLNARIDF
Ga0326597_108358781	3300031965	Soil	NMLNNPQFGNPNTNMYSNNFGRITGAGGARQFTLNARIDF
Ga0306922_106931411	3300032001	Soil	KPQWGLPVTNINSATFGRITTATGNRTVTFNARLDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080287

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences