NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F080273

Metagenome Family F080273

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080273
Family Type Metagenome
Number of Sequences 115
Average Sequence Length 84 residues
Representative Sequence MKTYETSATVEEQGRVLVAGVPFAPGTEVEVTISPKLRSADEVTPAADAALAAARDRMRELFRTIKGFRNSPRIPREELYERGRFR
Number of Associated Samples 90
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 67.83 %
% of genes near scaffold ends (potentially truncated) 23.48 %
% of genes from short scaffolds (< 2000 bps) 87.83 %
Associated GOLD sequencing projects 83
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (87.826 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(17.391 % of family members)
Environment Ontology (ENVO) Unclassified
(23.478 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.174 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.32%    β-sheet: 1.75%    Coil/Unstructured: 71.93%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF01850PIN 31.30
PF01909NTP_transf_2 0.87
PF07586HXXSHH 0.87
PF07394DUF1501 0.87
PF07596SBP_bac_10 0.87
PF001982-oxoacid_dh 0.87
PF01527HTH_Tnp_1 0.87
PF00920ILVD_EDD 0.87
PF14707Sulfatase_C 0.87
PF04026SpoVG 0.87
PF01381HTH_3 0.87
PF13361UvrD_C 0.87
PF01494FAD_binding_3 0.87
PF00535Glycos_transf_2 0.87
PF13586DDE_Tnp_1_2 0.87
PF13646HEAT_2 0.87
PF01844HNH 0.87
PF07228SpoIIE 0.87
PF13489Methyltransf_23 0.87
PF01979Amidohydro_1 0.87
PF00456Transketolase_N 0.87
PF00106adh_short 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0129Dihydroxyacid dehydratase/phosphogluconate dehydrataseCarbohydrate transport and metabolism [G] 1.74
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.74
COG2165Type II secretory pathway, pseudopilin PulGCell motility [N] 1.74
COG0021TransketolaseCarbohydrate transport and metabolism [G] 0.87
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 0.87
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.87
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.87
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.87
COG2088DNA- and RNA-binding protein SpoVG, cell septation regulatorTranscription [K] 0.87
COG3959Transketolase, N-terminal subunitCarbohydrate transport and metabolism [G] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.83 %
UnclassifiedrootN/A12.17 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q02HD6P4All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae555Open in IMG/M
3300001213|JGIcombinedJ13530_100086976All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae574Open in IMG/M
3300003995|Ga0055438_10011245All Organisms → cellular organisms → Bacteria1838Open in IMG/M
3300004152|Ga0062386_100938966All Organisms → cellular organisms → Bacteria → PVC group715Open in IMG/M
3300004156|Ga0062589_100620735All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300004463|Ga0063356_101399467All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300004463|Ga0063356_101669558All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300004480|Ga0062592_100354215All Organisms → cellular organisms → Bacteria → PVC group1143Open in IMG/M
3300004480|Ga0062592_102466741All Organisms → cellular organisms → Bacteria → PVC group522Open in IMG/M
3300005167|Ga0066672_10778957All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae604Open in IMG/M
3300005178|Ga0066688_10259219All Organisms → cellular organisms → Bacteria → PVC group1115Open in IMG/M
3300005180|Ga0066685_10977782All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae560Open in IMG/M
3300005181|Ga0066678_11091610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria514Open in IMG/M
3300005187|Ga0066675_10824564Not Available701Open in IMG/M
3300005332|Ga0066388_105699127All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005332|Ga0066388_107500535All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005533|Ga0070734_10096381All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae1740Open in IMG/M
3300005534|Ga0070735_10085509All Organisms → cellular organisms → Bacteria2003Open in IMG/M
3300005537|Ga0070730_10723643All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae630Open in IMG/M
3300005542|Ga0070732_10102671All Organisms → cellular organisms → Bacteria1685Open in IMG/M
3300005552|Ga0066701_10093197All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1748Open in IMG/M
3300005555|Ga0066692_10525817All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria751Open in IMG/M
3300005559|Ga0066700_10423508All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300005712|Ga0070764_10938350All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae543Open in IMG/M
3300005764|Ga0066903_101442739All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300005764|Ga0066903_102095597All Organisms → cellular organisms → Bacteria → PVC group1088Open in IMG/M
3300006046|Ga0066652_101890139All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae536Open in IMG/M
3300006176|Ga0070765_100217908All Organisms → cellular organisms → Bacteria → PVC group1739Open in IMG/M
3300006797|Ga0066659_11416633All Organisms → cellular organisms → Bacteria → PVC group580Open in IMG/M
3300006893|Ga0073928_10017820All Organisms → cellular organisms → Bacteria7498Open in IMG/M
3300006893|Ga0073928_10059246All Organisms → cellular organisms → Bacteria3394Open in IMG/M
3300007982|Ga0102924_1179962All Organisms → cellular organisms → Bacteria → Proteobacteria939Open in IMG/M
3300009012|Ga0066710_101634154All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae985Open in IMG/M
3300009012|Ga0066710_103679470All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae577Open in IMG/M
3300009038|Ga0099829_10895739Not Available736Open in IMG/M
3300009088|Ga0099830_10242810Not Available1423Open in IMG/M
3300009089|Ga0099828_10495754All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300009089|Ga0099828_11582002All Organisms → cellular organisms → Bacteria → PVC group577Open in IMG/M
3300009137|Ga0066709_101896831All Organisms → cellular organisms → Bacteria → PVC group830Open in IMG/M
3300009137|Ga0066709_102124144Not Available776Open in IMG/M
3300009137|Ga0066709_104677627All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae501Open in IMG/M
3300009607|Ga0123327_1229226All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae597Open in IMG/M
3300009610|Ga0105340_1201803All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes837Open in IMG/M
3300009770|Ga0123332_1101730All Organisms → cellular organisms → Bacteria → PVC group1335Open in IMG/M
3300009868|Ga0130016_10004099All Organisms → cellular organisms → Bacteria27809Open in IMG/M
3300010042|Ga0126314_10464968All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300010319|Ga0136653_10089742All Organisms → cellular organisms → Bacteria1492Open in IMG/M
3300010319|Ga0136653_10136725Not Available1158Open in IMG/M
3300010373|Ga0134128_10738244All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae1092Open in IMG/M
3300010379|Ga0136449_100183372All Organisms → cellular organisms → Bacteria → Proteobacteria4022Open in IMG/M
3300010379|Ga0136449_100677423All Organisms → cellular organisms → Bacteria1736Open in IMG/M
3300010379|Ga0136449_101080702All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300011269|Ga0137392_11589739All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae512Open in IMG/M
3300011270|Ga0137391_10236717All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300011270|Ga0137391_10258509All Organisms → cellular organisms → Bacteria → PVC group1508Open in IMG/M
3300012043|Ga0136631_10451229Not Available526Open in IMG/M
3300012189|Ga0137388_10735908Not Available915Open in IMG/M
3300012202|Ga0137363_10450110All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300012202|Ga0137363_11186194All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium SCGC AG-212-D15649Open in IMG/M
3300012205|Ga0137362_10012242All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia6327Open in IMG/M
3300012205|Ga0137362_11595540Not Available539Open in IMG/M
3300012212|Ga0150985_104342784All Organisms → cellular organisms → Bacteria → PVC group749Open in IMG/M
3300012212|Ga0150985_120241118All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae579Open in IMG/M
3300012212|Ga0150985_120344107All Organisms → cellular organisms → Bacteria → PVC group852Open in IMG/M
3300012357|Ga0137384_10542426All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300012361|Ga0137360_10517331All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300012361|Ga0137360_11337844All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae618Open in IMG/M
3300012362|Ga0137361_10073791All Organisms → cellular organisms → Bacteria2899Open in IMG/M
3300012469|Ga0150984_110682008All Organisms → cellular organisms → Bacteria → PVC group639Open in IMG/M
3300012917|Ga0137395_10857241All Organisms → cellular organisms → Bacteria → PVC group658Open in IMG/M
3300012929|Ga0137404_11775212All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae573Open in IMG/M
3300012930|Ga0137407_10310814All Organisms → cellular organisms → Bacteria → PVC group1443Open in IMG/M
3300012943|Ga0164241_11155060All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae571Open in IMG/M
3300012977|Ga0134087_10475576All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae624Open in IMG/M
3300012986|Ga0164304_11774519All Organisms → cellular organisms → Bacteria → PVC group516Open in IMG/M
3300013091|Ga0163210_1109972All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae990Open in IMG/M
3300013100|Ga0157373_10752717All Organisms → cellular organisms → Bacteria → PVC group716Open in IMG/M
3300014501|Ga0182024_10094412All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales4386Open in IMG/M
3300014501|Ga0182024_10834716All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300014501|Ga0182024_12523800All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Schlesneria → Schlesneria paludicola554Open in IMG/M
3300015264|Ga0137403_10517899All Organisms → cellular organisms → Bacteria → PVC group1063Open in IMG/M
3300016270|Ga0182036_11292604All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300016341|Ga0182035_11338038All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300016404|Ga0182037_12036531Not Available516Open in IMG/M
3300016422|Ga0182039_11029240All Organisms → cellular organisms → Bacteria → PVC group739Open in IMG/M
3300016422|Ga0182039_11133446All Organisms → cellular organisms → Bacteria → Proteobacteria705Open in IMG/M
3300017970|Ga0187783_10754455Not Available702Open in IMG/M
3300017970|Ga0187783_10767868All Organisms → cellular organisms → Bacteria → PVC group695Open in IMG/M
3300017991|Ga0180434_10254852All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia1389Open in IMG/M
3300018062|Ga0187784_10185702All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium 21-66-51698Open in IMG/M
3300018078|Ga0184612_10392087All Organisms → cellular organisms → Bacteria → PVC group699Open in IMG/M
3300018080|Ga0180433_10038927All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes4612Open in IMG/M
3300018082|Ga0184639_10521623All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae595Open in IMG/M
3300018468|Ga0066662_10288690All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium1369Open in IMG/M
3300019487|Ga0187893_10865320Not Available543Open in IMG/M
3300020214|Ga0194132_10540015All Organisms → cellular organisms → Bacteria → PVC group569Open in IMG/M
3300022556|Ga0212121_10095821All Organisms → cellular organisms → Bacteria2272Open in IMG/M
3300022556|Ga0212121_10343189Not Available995Open in IMG/M
3300022556|Ga0212121_10515868All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae763Open in IMG/M
3300022557|Ga0212123_10058032All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3459Open in IMG/M
3300022557|Ga0212123_10080913All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae2743Open in IMG/M
(restricted) 3300023208|Ga0233424_10004047All Organisms → cellular organisms → Bacteria → Proteobacteria9122Open in IMG/M
3300025910|Ga0207684_10999308All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300026326|Ga0209801_1290869All Organisms → cellular organisms → Bacteria → PVC group587Open in IMG/M
3300027047|Ga0208730_1046417All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae511Open in IMG/M
3300027692|Ga0209530_1125219All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae725Open in IMG/M
3300027842|Ga0209580_10006388All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae5044Open in IMG/M
3300027879|Ga0209169_10658500All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae545Open in IMG/M
3300028906|Ga0308309_11140136All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae673Open in IMG/M
3300031708|Ga0310686_100628966All Organisms → cellular organisms → Bacteria → PVC group1415Open in IMG/M
3300031753|Ga0307477_10357155Not Available1004Open in IMG/M
3300031823|Ga0307478_10785920Not Available797Open in IMG/M
3300032074|Ga0308173_10726932All Organisms → cellular organisms → Bacteria → PVC group909Open in IMG/M
3300032160|Ga0311301_12814296All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae531Open in IMG/M
3300032515|Ga0348332_13956214All Organisms → cellular organisms → Bacteria → PVC group613Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil17.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.22%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water4.35%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring4.35%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.35%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.61%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost2.61%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.61%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.74%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.74%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.74%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.74%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.74%
Anaerobic Biogas ReactorEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor1.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.87%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.87%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.87%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.87%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.87%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.87%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.87%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.87%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.87%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.87%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009607Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNAEngineeredOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009770Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNAEngineeredOpen in IMG/M
3300009868Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plantEngineeredOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010319Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaGEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012043Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013091Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_220mEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017991Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300020214Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80mEnvironmentalOpen in IMG/M
3300022556Kivu_combined assemblyEnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300027047Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
E41_106000202170459005Grass SoilMQVNPYQVMAMNTYETTTTVEDHGQVRVAGVPFAPGTEVEVTISPKLPTKDRVTLQDDEAGTAARDRTRELFRTITGFRNSPRIPREEVYHRGDR
JGIcombinedJ13530_10008697613300001213WetlandMTTYETSARVQVEGEVRVVGVPFAPGTEVEVTISPKVTSNEASTDVDDEALTDARARMRELFRTIKGFRMGPKVPREDLYERGSLR*
Ga0055438_1001124513300003995Natural And Restored WetlandsMQAYETSTTVQGQGVVSVAGVPFEPGTEVDVTISPKLPSKEQLPAPGDEALTAARDRMRELFHSIKGFRNSPRIPREELYERGSLR*
Ga0062386_10093896613300004152Bog Forest SoilMETYETCATVEEHGQVLVAGVPLAPGTAVQVTITPKRRGENEVTSAPDVALAAARHRMQDLFRTIKGFRNSPRIPREELYERGSLR*
Ga0062589_10062073523300004156SoilMSPFETSATVEEHGRVQVGGVPFATGTEVEVTISPKAGSERAATAAADDALAAARDRMRELFRTILGFRNSPQI
Ga0063356_10139946723300004463Arabidopsis Thaliana RhizosphereMERSSICRGVGAMKTFETSGTVEEQGRILVAGVPFAPGTEVEITISPKRRSEEEVTSADDSALAAARERMRELFRTVKGFRNSPRIPREELHERGRLH*
Ga0063356_10166955823300004463Arabidopsis Thaliana RhizosphereMTNFETSAMVGDQGRVLIAGVPFAPGSEVDVKISLKNRSGGEATPQDDASLDAARERMRELFRTIKGFHNTPRIPREELYDRGSLR*
Ga0062592_10035421533300004480SoilMSPFETSATVEEHGRVQVGGVPFATGTEVEVTISPKAGSERAATAAADDALAAARDRMRELFRTILGFRNSPQISREELYDRGSLR*
Ga0062592_10246674113300004480SoilMSSFETSATVQEQGRVLVVGVPFAPGTEVAIRMSAKTPAEDQGAPPDDEALIAARERMRALFGTVRGFRNSPRIPREELYERGRVH*
Ga0066672_1077895723300005167SoilMSIFETSGTVEEQGRVLVAGVPFAPGTEVEITISPKRRSDDQLTPPDDKALAAARERMRELFRTIKGFRNSPRIAREELYERGRIR*
Ga0066688_1025921933300005178SoilMKTFETSATVQEQGRVLVAGVPFAPGTEVEITISPKRRSDDQLTPPDDKALAAARERMRELFRTIKGFRNSPRIAREELYERGRIR*
Ga0066685_1097778213300005180SoilVAGVPFAPGTEVEITISPKRRSDDQVTPPDDKALAAARERVRELFRTIKGFRNSPRIAREELYERGRIR*
Ga0066678_1109161023300005181SoilLMNTFETSATVAEQGEVRVAGVPFAPGTEVAVTISPKLRPEEEPRPPADGKLAATRDRMRELFRTVKGFRMAPKLSREELYDRRSFR*
Ga0066675_1082456423300005187SoilMKTFETSATVQEQGRVLVAGVPFAPGTEVEITISPKRRSDDQLTPPDDKALAAARERMRELFRTIKGFRNS
Ga0066388_10569912723300005332Tropical Forest SoilMSTSATSATVEEQGRVHVAGVPFAPGTEVEVTITPKALPEDEGTRSDDKALAAARDRMRELFRTIKGFRNSPRIPREELYERGRVP*
Ga0066388_10750053523300005332Tropical Forest SoilMNTYETSATVQDQGQVHLSGVPFAPGTEVEVTISPKLRSQNEVTTDEQALAAARARMQELFRTIKGFCNTPRIPREELYERGSLR*
Ga0070734_1009638123300005533Surface SoilMTHYETTATVEEHGQVHVDGVPFAPGTTVEVTISPKERIEPTAASPDDATLAAARERMRNLFGIIKGFRNSPRIAREELYERGSLR*
Ga0070735_1008550923300005534Surface SoilMNTYETTATVENNGQVRLAGVPFAAGTEVEITISAKLRSKDEVKQSEEVVLAASRERMRELFRTVKGFRNSPRIPREELYERGSFR*
Ga0070730_1072364313300005537Surface SoilMTAHPNETATMDTYATSATVQDQGRVLVAGVPFAPGTEVEITICPKRRAEPGPATPDEATLTAARDRMRELFRTIKGFRNSPRIPREELHERGSLR*
Ga0070732_1010267133300005542Surface SoilMNTYETSATVEDQGQIHVAGVPFAPGTEVEVKISLKAGSGDEITAAGNEVLAAVRQRMRELFQTIKGFRNSPRIPREELYERGRVH*
Ga0066701_1009319723300005552SoilVAGVPFAPGTEVEITISPKRRSDDQLTPPDDKALAAARERMRELFRTIKGFRNSPRIAREELYERGRIR*
Ga0066692_1052581723300005555SoilMNTYETTATVEAQGQVRVAGVPFAPGTEVEVTISPKVRSADEVMHSEDEALAATRGRMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0066700_1042350813300005559SoilQGRVLVAGVPFPPGTEVEVTISPKVRSEDELTRPDDQGLTASRDRMRELFRTIKGFRNSPRIPREELYERGRLH*
Ga0070764_1093835023300005712SoilMKTYETSATVEDQGQVRVAGVPFAPGTEVEVTISPKVRSEAQVASTQAEALVASRDRMRELFRTIKGFRNSPRIPREDLYERGRLH*
Ga0066903_10144273923300005764Tropical Forest SoilMNIFETSATVEDQGRVQVVGVPFAKGTQVSIAISPKLPAVDKVTHSADAALEVARERMRELFRTTKGFRNSPRIPREELYERGRLR*
Ga0066903_10209559723300005764Tropical Forest SoilMNTFETITTVEENGQVHVAGVPFEAGTEVAVRSSPKSLAADEVSSAEETALAAARERMRELFKSVKGFRNSPRIPREDLYERGRVH*
Ga0066652_10189013913300006046SoilMNTYETTATVEAQGQVRVAGVPFAPGTEVEVTISPKVRSADEVMHSEDEALAATRGRMRELFRTIKGFRNSPRIPREELYERGRLR*
Ga0070765_10021790823300006176SoilMKTYETSATVEDQGRVRVVGVPFAPGTEVEVTISPKLGPEDQVTRPQAEALAASRDRMRELFRTIKGFRNSPRIPREELHERGRLH*
Ga0066659_1141663313300006797SoilDVTISLKPASHDQARLGDDQVLAAARDRMRELFRTVKGFRNSPRIAREELYERGRIR*
Ga0073928_1001782083300006893Iron-Sulfur Acid SpringMSTYETSATVEEQGRVLVAGVPFAPGTEVEVTISPKVGSENEVTRAEDQALAGSRERMRELFATVKGFRMAPKMRREDLYDRRSFR*
Ga0073928_1005924633300006893Iron-Sulfur Acid SpringMRTYETSATVEDQGRIRLAGVPFAPGTEVDVAISPKAPAEMEMTSPDDAALAAARDRLRELFRTVQGFRMSPRIPREELYDRGRPR*
Ga0102924_117996213300007982Iron-Sulfur Acid SpringDQGRIRLAGVPFAPGTEVDVAISPKAPAEMEMTSPDDAALAAARDRLRELFRTVQGFRMSPRIPREELYDRGRPR*
Ga0066710_10163415423300009012Grasslands SoilMKTFETSATVQEQGRVLVAGVPFAPGTEVEITISPKRRSDDQLTPPDDKALAAARERMRELFRTIKGFRNSPRIAREELYERGRIR
Ga0066710_10367947013300009012Grasslands SoilQGRMLVAGVPFAPGTEVEITISPKARSADEVKHSDDEALAADRARMRELFRTIKGFRNSPRIPREELYERGRVH
Ga0099829_1089573913300009038Vadose Zone SoilMSIFETSGTVEEQGRVLVAGVPFAPGTEVEITISPKARSADAVKHSDDEALAAARARMRELFRTIKGFRNSP
Ga0099830_1024281033300009088Vadose Zone SoilMSSFETSGTVEEHGRVLVAGVPFAPGTEVDITISPKVRSADEVRHSDDEALARARSRMRELFRTIKGFRNSPRI
Ga0099828_1049575443300009089Vadose Zone SoilPEVNAMSIFETSGTVEEHGRVLVAGVPFAPGTEVEITISPKVRSADEVRHSDDQALAAARARMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0099828_1158200223300009089Vadose Zone SoilMSSFETSGTVEEHGRVLVAGVPFAPGTEVDITISPKVRSADEVKYMDDEALAGARRRMRELFRTIKGFRNSPRIAREELYERGRVH*
Ga0066709_10189683123300009137Grasslands SoilMNIYETTATVEEQGQVHVAGVPFAPGTEVEVAISPKQRSENEVMPPDDEALAAARDRMRSLFRTIKGFRNSPRIPREELYERGRLR*
Ga0066709_10212414413300009137Grasslands SoilMSIFATSATVEQPGRVLVAGLPFAPGTEVEIMITPKVRPADEVRHSDDDASPAARGRMRELFRTIKGFRNSPRVPREELYERGHVH*
Ga0066709_10467762713300009137Grasslands SoilMQVTAMEMYETSATVEEQGRVLVAGVPFAPGTEVEITITPKVRSADEVRHSDDEALAAARGRMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0123327_122922613300009607Anaerobic Biogas ReactorMVQAEGEVRVVGVPFAPGTEVEVTISRRVRSNEASPDVDDEALTAARARMRELFGTIKGFRMEPKIPREELHERGSLR*
Ga0105340_120180323300009610SoilMKTYETSATVEDQGQIRLSGVPFAPGTEVEVAISLKMQAAEVMSSDDGDLAAARDRMRELFSTIKGFRNSPRIPREELYDRGRVR*
Ga0123332_110173013300009770Anaerobic Biogas ReactorMVQAEGEVRVVGVPFAPGTEVEVTISAKVRSNEASTLVDDEALTAARARMRELFRTIKGFRMGSKIPREELYERGSLR*
Ga0130016_10004099223300009868WastewaterMVDMKTYETSAKVEDRGEVRLSGVPFEPGTEVEVTISQKTRSADENARSDVEAWAAARDRMRELLRTATGFRNTPRISREDLYERGSLP*
Ga0126314_1046496823300010042Serpentine SoilLPLRSGRRILVAGVPFAPGTEVAITISPKPQAGEDSTSPDDPALAAARDRLRELFRTIEGFRNSPRIAREELYERGSLR*
Ga0136653_1008974233300010319Anoxic Lake WaterVMTTYETSAMVQAEGEVRVVGVPFAPGTEVEVTISPKVRPNEASTHVDDEAWTAARARMRELFRTIKGFRMGPKIPREELYERGSLR*
Ga0136653_1013672533300010319Anoxic Lake WaterMTTYETSAVVQAEGEVRVVGVPFAPGTEVEVTISPKVRSNEASTHVDDEALTAARARMRELFRTIRGFRMGRKIPREELHERGSLH*
Ga0134128_1073824423300010373Terrestrial SoilMNFYETSATVQDQGQVLVVGVPFAPGTEVEVTITPKGRPEEGGTHPDDTALAASRDRMRELFRTIKGFRNSPRIPREELYERGRVR*
Ga0136449_10018337243300010379Peatlands SoilMNIYETSATVGEQGRVLVAGVPFAPGTEVEVTISPKIQSEDTLTPPDDAGLAVSRARMRELFRAIKGFRISPRIPREELYERGRLR*
Ga0136449_10067742323300010379Peatlands SoilMKSYETFATVEEQGRVLVAGVPFAPGTEVEITISPKRRSEDEASSPDDETLAASRDRMRELFRTIKGFRNSPHIPREELYERRRFH*
Ga0136449_10108070223300010379Peatlands SoilMKTYETSATVEEQGRVLVAGVPFAPGTEVEVTISPKLRSADEVTPAADAALAAARDRMRELFRTIKGFRNSPRIPREELYERGRFR*
Ga0137392_1158973923300011269Vadose Zone SoilMSIFETSGTVEEQGRVLVAGVPFAPGTEVEITITPKVRSADEVRHSDDQALAAARARMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0137391_1023671733300011270Vadose Zone SoilMRQYTHVHKAPEVNAMNIFETSGTVEEQGRVLVAGVPFAPGTEVEITISPKVRSADEVRHSDDQALAAARARMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0137391_1025850933300011270Vadose Zone SoilMSSFETSGTVEEHGRVLVAGVPFAPGTEVDITISPKVRSADEVKYMDDEALAGARRRMRELFRTIKGFRNYPG*
Ga0136631_1045122913300012043Polar Desert SandQGRVLVAGVPFALGTEVEVTVSPKVCSEAEVIRADDAALAAARDLMRELFRTIKGFHMSPRISRDELYERVRSQSP*
Ga0137388_1073590823300012189Vadose Zone SoilMKTYETSATVEAHGQIHIAGVPFAPGTEVAITISPKLRPEDELMSADDEALAVARERMRELFGTIKGFRNSLRIPREELYQRGKS*
Ga0137363_1045011023300012202Vadose Zone SoilMSIFETSGTVEEQGRVLVAGVPFAPGTEVEITISPKARSADAVKHSDNEALAAARARMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0137363_1118619423300012202Vadose Zone SoilMKTFETSGTVQDQGRVLVAGVPFAPGAEVDITISRKRPFDDEGTPAEDKALAAARDRMRDLFSTIKGFRNSPRIAREELYERGRIRWHEANGVSHAL
Ga0137362_1001224223300012205Vadose Zone SoilMNTFETSGTVEEQGRVLIAGVPFAPGTEVEITISPKVGSTDAVKHSDNEALAAARARMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0137362_1159554013300012205Vadose Zone SoilMKTYETFATVEDQGRIHVAGVPFAPGTEVEVRISPKARSEIEVTRADAAALAASRDQMQE
Ga0150985_10434278413300012212Avena Fatua RhizosphereGAENQAMSTFETSATVEEHGRVLLSGVPFAPGTEVEVTISPKLQSRDQGTPPDDAALNAARERMRELFLTIKGFRNSPRIPREELYERGSLR*
Ga0150985_12024111813300012212Avena Fatua RhizosphereMNSYETTATVEDRGQVRVAGVPFEPGTQVQVTISPKAAGLSESRSDDGDDEAWAAARRRMGELIATARGFRNSPRIPREDLYERGRLP*
Ga0150985_12034410723300012212Avena Fatua RhizosphereMRSYETSATVEDHGQVRLAGVPFAAGTEVEITISPKVQSEEATPEEDEALAASRERMRELFRTIKGFRMSPRMTREELYERASLR*
Ga0137384_1054242633300012357Vadose Zone SoilMSSFETSGTVEEHGRVLIAGVPFAPGTEVDITISPKVRSADEVKYMDDEALAGARRRMRELFPTIKGFRNSPRIARDELYERGRVH*
Ga0137360_1051733133300012361Vadose Zone SoilMSIFETSGTVEEQGRVLVAGVPFAPGTEVEITISPKVGSADAVKHSDNEALAAARARMRELFRTIKGFRNSPRIPREELYERGSLR*
Ga0137360_1133784423300012361Vadose Zone SoilMNTYETTATVEDHGQLHVAGVPFAPGTEVEVTISPKVRSADEVMHSEDEALAAARGRMRELFRTIKGFRNSPRIPREELYERGRVH*
Ga0137361_1007379113300012362Vadose Zone SoilMKIYETSGTVQEQGRILVAGVPFAPGAEVEITISPKRRSENEVTPQDDKTLAAARDRMRDLFRTIKGFRNSPRIRREELYDRGSIR*
Ga0150984_11068200823300012469Avena Fatua RhizosphereMRAYKTSAIVEEHGRILVAGVPFAPGTEVAITISPKPQAGVDSTPPDDPTLAAARDRLRELFRTVKGFRNSPRIAREELYERGSLR*
Ga0137395_1085724123300012917Vadose Zone SoilMKTFETSGTVQDQGRVLVAGVPFAPGTEVDITISPKRPSVHQGTPAEDKALAAARDRMRDLFSTIKGFRNSPRIAREELYERGRIR*
Ga0137404_1177521213300012929Vadose Zone SoilMSIFETSGTVEEQGRVLVAGVPFAPGTEVEITISPKVGSADAVKHSDNEALAAARARMRELFRTIKGFRNSPRIPREELYDRGRLR*
Ga0137407_1031081433300012930Vadose Zone SoilMAVHHEQALDMNSYATSATVEAQGQIRVAVPFAPGTEVEVTISPKVRSKEVVTLRDDEGLVATRDRMRELFRTIKGFRNSPRIPREELYERGSLP*
Ga0164241_1115506023300012943SoilMQTYETSATVEDHGQIHVAGVPFAPGTEVEITISLKDQTPDANAETLAQVRQRMRELFRTVKGFGNSPRIPREELYDRGSLR*
Ga0134087_1047557623300012977Grasslands SoilMKTFETSATVQEQGRVLVAGVPFAPGTEVEITISPKRRSDDQLTPPDDKALAAARERMRELFRTIKGFRNSPRIA*
Ga0164304_1177451913300012986SoilRVRVAGVPFAAGTEVEVTISPKRQAEEGMTSPDDAALTAARERMRELFRTTKGFRNSPRIPREELYERGSLH*
Ga0163210_110997223300013091FreshwaterMVQAEGEVRVVGVPFAPGTEVEVTISPKVRSNEASTHVDDEALTAARARMRELFRNIRGFRMGRKIPREELCERGSQ*
Ga0157373_1075271723300013100Corn RhizosphereMNDTPEGAVAMKTYETTATVEAHGHVRVAGVPFAAGTEVEVTISPKRQTEEGMSTPEDAAWTAARQRMRELIRTTKGFRNLPRIPREELYERGSLH*
Ga0182024_1009441223300014501PermafrostMKTFETSATVEEQGRVFLAGVPFAPGTEVEVTISPKVRPTAEVTRADEAVLAAARERMRELFRTVKGFRNSPRIPREELHERGRFH*
Ga0182024_1083471633300014501PermafrostMNAYETTATVEDHGQVCVAGVPFEPGTEVEVIISPKARSTDDTARSDEEAWSAARQRMRELLGTAKGFRNSPRIPREELYERGRVF*
Ga0182024_1252380023300014501PermafrostMKTYETSATVEDQGQVCVAGVPFAPGTEVAVTISPKRRSQDQVMPTDDAALAAARDRMRELFRTIQGFRNLPRIPREELYEHGSLR*
Ga0137403_1051789923300015264Vadose Zone SoilMSIFETSGTVEEQGRVLVAGVPFAPGTEVEITISPKVGSADAVKHSDNEALAAARARMRELFRTIKGFRNSPRIPREELYERGSLP*
Ga0182036_1129260413300016270SoilDHGRVQVVGVPFAKGTQVSIAISPKVPSVDKVTHSADAALEAARERMRELFRTTKGFRNSPRIPREELYERGRLR
Ga0182035_1133803813300016341SoilTVEDQGRVQVVGVPFEKGTQVSIAISPKLPSADKVTHSADAALEAARERMRELFRTTTGFRNSARIPREELYERGRLR
Ga0182037_1203653113300016404SoilMNMFETSATVEDHGRVQVVGVPFAKGTQVSIAISPKVPSVDKVTHSADAALEAARERMRELFRTTTGFRNSARIPREELYERGRLR
Ga0182039_1102924013300016422SoilMNMFETSATVEDHGRVQVVGVPFAKGTQVSIAISPKVPSVDKVTHSADAALEAARERMRELFRTTKGFHNSPRIPREELYERGRLR
Ga0182039_1113344613300016422SoilVDEQGRVLITGVPFAPGTEVDITISPILQSEDEMTASDDPILVAARARMRELFGTIKEFRNSPQIPREELNDRGSIP
Ga0187783_1075445513300017970Tropical PeatlandMETYETSATVEEQGQIHVAGVPFAPGTEVDITISPKRQSDTEMTSPADAALAMARGRMRELFRTIKGFCNSLRIPRQELHERGSLC
Ga0187783_1076786823300017970Tropical PeatlandCGPSDRMGYTLNGRESRMNIFETSATVEEQGRVQIVGVPFAAGTEVEVTIRAKRLEDAALAAARDRMRELFRTIKGFRNLPRIPREELYERGSLR
Ga0180434_1025485233300017991Hypersaline Lake SedimentGEAMAPYETSALVQAEGEVRVLGVPFAPGTEVEVTINPKVRSNGASAHVDDKALAAARARMRELFRTITGFRMGPKIPREELHERGSVR
Ga0187784_1018570213300018062Tropical PeatlandMTTYETSAMVQAKGEVRVVGVPFAPGTEVEVTISPKVRSNEAPTHVDDEALGAARARMRELFRTIKGFRMGPKIPREELYERGSSHGG
Ga0184612_1039208713300018078Groundwater SedimentMSSFETTATVEDQGEVRIAGVPFAPGTEVEVTISPKSPSQEQVRLRDDQALAAARDRMRELFRTVKGFRNSPRIPREDLYGRGRLH
Ga0180433_1003892743300018080Hypersaline Lake SedimentMAPYETSALVQAEGEVRVLGVPFAPGTEVEVTINPKVRSNEASARVDDEALAAARARMRELFRTITGFRMGPKIPREELHERGSVR
Ga0184639_1052162323300018082Groundwater SedimentMKAYETSARVEDQGQVRVAGVPFAPGTEVDVTISPKRWSAEALSAADAQALVAARTRMQELFRTVRGFRTSPKIPREELYERGSLR
Ga0066662_1028869033300018468Grasslands SoilMKIYETSGTVQEQGRILVAGVPFAPGAEVEITISPKRRSENEVTPQDDKTLAAARDRMRDLFRTIKGFRNSPRIRREELYDRGSIR
Ga0187893_1086532013300019487Microbial Mat On RocksMSTYETSTTVQEQGRVLVAGVPFAPGTEVEVAISPKARSDEEMARLEDQAWAAARQRMRELLGAAKGFRNSPRITREELYERGRLP
Ga0194132_1054001523300020214Freshwater LakeMKAYQTSATVDAQGQLRLSSVPFAPGTQVEVTISPKAPPAVASDEAVAMARERMQELFSRIRGFRNSPRIPREELYDRGRVH
Ga0212121_1009582133300022556Anoxic Lake WaterMTTYETSAMVQAEGEVRVVGVPFAPGTEVEVTISPKVRPNEASTHVDDEAWTAARARMRELFRTIKGFRMGPKIPREELYERGSLR
Ga0212121_1034318913300022556Anoxic Lake WaterMTTYETSAVVQAEGEVRVVGVPFAPGTEVEVTISPKVRSNEASTHVDDEALTAARARMRELFRTIRGFRMGRKIPREELHERGSLH
Ga0212121_1051586813300022556Anoxic Lake WaterVQAEGEVRVVGVPFAPGTEVEVTISPKVRSNEASTHVDDEALTAARARMRELFRTIRGFRMGRKIPREELCERGSQ
Ga0212123_1005803243300022557Iron-Sulfur Acid SpringMRTYETSATVEDQGRIRLAGVPFAPGTEVDVAISPKAPAEMEMTSPDDAALAAARDRLRELFRTVQGFRMSPRIPREELYDRGRPR
Ga0212123_1008091373300022557Iron-Sulfur Acid SpringMSTYETSATVEEQGRVLVAGVPFAPGTEVEVTISPKVGSENEVTRAEDQALAGSRERMRELFATVKGFRMAPKM
(restricted) Ga0233424_1000404713300023208FreshwaterVNAFATSTTVKEQGQIHLAGVPFAPGTEVEVTISLKARTEEAVTAPDDAELIAARERMRELFAAITGFRNSPRIPREALYERGRVH
Ga0207684_1099930823300025910Corn, Switchgrass And Miscanthus RhizosphereGRVLVAGVPFAPGTQVEITISPKVQSADEVRHSDDAALAAARTRMRELFRTIKGFRNSPRMPREELYERGRVH
Ga0209801_129086923300026326SoilLMNTFETSATVAEQGEVRVAGVPFAPGTEVAVTISPKLRPEEEPRPPADGKLAATRDRMRELFRTVKGFRMAPKLSREELYDRRSFR
Ga0208730_104641723300027047Forest SoilMQSYETSARVEEKGQVTVAGVPFAPGTEVEVTISPKSPSKDRMLPPNDEALTVARDRMRELFRTIRGFRNSPRIPREEL
Ga0209530_112521923300027692Forest SoilMTTYETSATVAAKGEVHVAGVPFAPGTEVEVTISPKARSEAEVTRADDAALSAARERMRELFSTIKGFRNSPRIPREDLYERGRLH
Ga0209580_1000638833300027842Surface SoilMDAPASGSARAIAEEAAMNTYETSATVEDQGQIHVAGVPFAPGTEVEVKISLKAGSGDEITAAGNEVLAAVRQRMRELFQTIKGFRNSPRIPREELYERGRVH
Ga0209169_1065850013300027879SoilMKTYETSATVEDQGQVRVAGVPFAPGTEVEVTISPKVRSEAQVASTQAEALVASRDRMRELFRTIKGFRNSPRIPREDLYERGRLH
Ga0308309_1114013613300028906SoilMKTYETSATVEDQGRVRVVGVPFAPGTEVEVTISPKLGPEDQVTRPQAEALAASRDRMRELFRTIKGFRNSPRIPREELHERGRLH
Ga0310686_10062896623300031708SoilMETYETSATVEDQGQVRVAGVPFAPGTEVEVTISPKVRSEEQVARSQAAALATSRDRMRELFRTIKGFRNSPRIPREELYERGRLH
Ga0307477_1035715523300031753Hardwood Forest SoilMNTYETSATVEDQGRIQVVGVPFAPGTEVQITIIPKRQLEMTPPEDEALAVARDRLRELFRTIKGFRNSPRIPREELYE
Ga0307478_1078592023300031823Hardwood Forest SoilMSPIKTYETSATVEDQGRVLLAGVPLAPGTEVDVAISPKTFPEEEVTNPDEVALAAARDRVRELIRTVTGFRASPRIPREQLYDRGRLH
Ga0308173_1072693223300032074SoilMSAYKTSAIVEEHGRILVAGVPFAPGTEVAIIISPKPQAGEDSTSPDDPTLAAARDRLRELFRTVKGFRNSPRIAREELYERGSLR
Ga0311301_1281429623300032160Peatlands SoilMKSYETFATVEEQGRVLVAGVPFAPGTEVEITISPKRRSEDEASSPDDETLAASRDRMRELFRTIKGFRNSPHIPREELYEHRRFH
Ga0348332_1395621413300032515Plant LitterMNTFETSAIVEEQGQVRLAGVPFAPGTEVEVTITPRLESADDETRSDSAAWAAARERMRQVLRATKGFRNSPRIPREDLYERGRFS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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