Metagenome / Metatranscriptome Family F080271

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080271
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	109 residues
Representative Sequence	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH
Number of Associated Samples	86
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	78.18 %
% of genes near scaffold ends (potentially truncated)	26.96 %
% of genes from short scaffolds (< 2000 bps)	74.78 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (69.565 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.652 % of family members)
Environment Ontology (ENVO)	Unclassified (45.217 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (84.348 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.14% β-sheet: 0.00% Coil/Unstructured: 52.86%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF12857	TOBE_3	2.61
PF04828	GFA	2.61
PF04879	Molybdop_Fe4S4	2.61
PF00144	Beta-lactamase	1.74
PF04909	Amidohydro_2	1.74
PF01370	Epimerase	0.87
PF07690	MFS_1	0.87
PF07813	LTXXQ	0.87
PF09286	Pro-kuma_activ	0.87
PF13738	Pyr_redox_3	0.87
PF02417	Chromate_transp	0.87
PF00285	Citrate_synt	0.87
PF11941	DUF3459	0.87
PF00528	BPD_transp_1	0.87
PF00589	Phage_integrase	0.87
PF00211	Guanylate_cyc	0.87
PF01361	Tautomerase	0.87
PF00982	Glyco_transf_20	0.87
PF04454	Linocin_M18	0.87
PF00903	Glyoxalase	0.87
PF13578	Methyltransf_24	0.87
PF12680	SnoaL_2	0.87
PF13191	AAA_16	0.87
PF00072	Response_reg	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.61
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.74
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.74
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.74
COG0372	Citrate synthase	Energy production and conversion [C]	0.87
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.87
COG1942	Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.87
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.87
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
All Organisms	root	All Organisms	30.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
cellular organisms	root	All Organisms → cellular organisms	30.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.57 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.61 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.74 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.87 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	1.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.74 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.74 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.87 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	1.74 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	1.74 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.74 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.87 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.87 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Solidesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio	1.74 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1.74 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	1.74 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	1.74 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	1.74 %
Hyalangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium	0.87 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.87 %
Rhodopirellula europaea	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	1.74 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	1.74 %
unclassified Hyalangium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → unclassified Hyalangium	0.87 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.87 %
Rhodopirellula europaea	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	1.74 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	1.74 %
Hyalangium sp. H56D21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → unclassified Hyalangium → Hyalangium sp. H56D21	0.87 %
Stigmatella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	0.87 %
Rhodopirellula europaea	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	0.87 %
Afipia clevelandensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	0.87 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100548994	Not Available	1032	Open in IMG/M
3300002245\|JGIcombinedJ26739_101566703	Not Available	555	Open in IMG/M
3300003220\|JGI26342J46808_1005991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300003352\|JGI26345J50200_1001565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2064	Open in IMG/M
3300003505\|JGIcombinedJ51221_10306525	Not Available	646	Open in IMG/M
3300004080\|Ga0062385_10912217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia clevelandensis	584	Open in IMG/M
3300004082\|Ga0062384_100668037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300004091\|Ga0062387_101679685	Not Available	515	Open in IMG/M
3300004092\|Ga0062389_104646502	Not Available	517	Open in IMG/M
3300004152\|Ga0062386_100456262	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300004152\|Ga0062386_100733626	Not Available	812	Open in IMG/M
3300005332\|Ga0066388_105311445	Not Available	653	Open in IMG/M
3300005437\|Ga0070710_10996240	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula europaea	610	Open in IMG/M
3300005538\|Ga0070731_10086126	Not Available	2082	Open in IMG/M
3300005538\|Ga0070731_10781035	Not Available	634	Open in IMG/M
3300005541\|Ga0070733_10320138	Not Available	1026	Open in IMG/M
3300005542\|Ga0070732_10659986	Not Available	636	Open in IMG/M
3300005591\|Ga0070761_10358371	Not Available	885	Open in IMG/M
3300005610\|Ga0070763_10945664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	514	Open in IMG/M
3300005921\|Ga0070766_10109516	Not Available	1647	Open in IMG/M
3300006176\|Ga0070765_101784629	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	577	Open in IMG/M
3300009683\|Ga0116224_10559013	Not Available	546	Open in IMG/M
3300010048\|Ga0126373_10051589	All Organisms → cellular organisms → Bacteria	3658	Open in IMG/M
3300010341\|Ga0074045_10156564	Not Available	1545	Open in IMG/M
3300010343\|Ga0074044_10054718	Not Available	2730	Open in IMG/M
3300010358\|Ga0126370_11807102	Not Available	591	Open in IMG/M
3300011120\|Ga0150983_14142052	Not Available	585	Open in IMG/M
3300012202\|Ga0137363_10883645	Not Available	759	Open in IMG/M
3300014201\|Ga0181537_10552494	Not Available	786	Open in IMG/M
3300017946\|Ga0187879_10377448	Not Available	786	Open in IMG/M
3300018009\|Ga0187884_10369027	Not Available	578	Open in IMG/M
3300018025\|Ga0187885_10550211	Not Available	513	Open in IMG/M
3300018042\|Ga0187871_10062816	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2198	Open in IMG/M
3300020579\|Ga0210407_10145996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1821	Open in IMG/M
3300020579\|Ga0210407_11081747	Not Available	608	Open in IMG/M
3300020580\|Ga0210403_10024850	All Organisms → cellular organisms → Bacteria → Proteobacteria	4779	Open in IMG/M
3300020581\|Ga0210399_11005589	Not Available	671	Open in IMG/M
3300020581\|Ga0210399_11172457	Not Available	611	Open in IMG/M
3300020582\|Ga0210395_10914960	Not Available	651	Open in IMG/M
3300020583\|Ga0210401_10634488	Not Available	930	Open in IMG/M
3300021171\|Ga0210405_10361576	Not Available	1144	Open in IMG/M
3300021171\|Ga0210405_10367671	Not Available	1134	Open in IMG/M
3300021171\|Ga0210405_10921915	Not Available	663	Open in IMG/M
3300021178\|Ga0210408_10684172	Not Available	809	Open in IMG/M
3300021178\|Ga0210408_11395643	Not Available	528	Open in IMG/M
3300021180\|Ga0210396_10136706	All Organisms → cellular organisms → Bacteria → Acidobacteria	2206	Open in IMG/M
3300021180\|Ga0210396_11342702	Not Available	593	Open in IMG/M
3300021181\|Ga0210388_11366943	Not Available	596	Open in IMG/M
3300021401\|Ga0210393_10001234	All Organisms → cellular organisms → Bacteria	21642	Open in IMG/M
3300021402\|Ga0210385_10042064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	3017	Open in IMG/M
3300021402\|Ga0210385_10426929	Not Available	998	Open in IMG/M
3300021402\|Ga0210385_10681843	Not Available	786	Open in IMG/M
3300021403\|Ga0210397_10967776	Not Available	660	Open in IMG/M
3300021404\|Ga0210389_10174365	All Organisms → cellular organisms → Bacteria	1673	Open in IMG/M
3300021405\|Ga0210387_11385467	Not Available	605	Open in IMG/M
3300021406\|Ga0210386_10249692	Not Available	1513	Open in IMG/M
3300021407\|Ga0210383_10000424	All Organisms → cellular organisms → Bacteria	39198	Open in IMG/M
3300021407\|Ga0210383_11706329	Not Available	516	Open in IMG/M
3300021420\|Ga0210394_10034945	All Organisms → cellular organisms → Bacteria	4482	Open in IMG/M
3300021432\|Ga0210384_11377763	Not Available	610	Open in IMG/M
3300021474\|Ga0210390_10252276	Not Available	1494	Open in IMG/M
3300021474\|Ga0210390_11463763	Not Available	542	Open in IMG/M
3300021474\|Ga0210390_11516034	Not Available	530	Open in IMG/M
3300021478\|Ga0210402_10792979	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300021478\|Ga0210402_11141861	Not Available	706	Open in IMG/M
3300021479\|Ga0210410_11291649	Not Available	622	Open in IMG/M
3300021479\|Ga0210410_11702687	Not Available	524	Open in IMG/M
3300021559\|Ga0210409_10179688	All Organisms → cellular organisms → Bacteria → Proteobacteria	1932	Open in IMG/M
3300021560\|Ga0126371_10020153	Not Available	6145	Open in IMG/M
3300022532\|Ga0242655_10285590	Not Available	533	Open in IMG/M
3300022716\|Ga0242673_1099088	Not Available	561	Open in IMG/M
3300022722\|Ga0242657_1199252	Not Available	553	Open in IMG/M
3300024227\|Ga0228598_1079695	Not Available	656	Open in IMG/M
3300024271\|Ga0224564_1040611	All Organisms → cellular organisms → Bacteria → Proteobacteria	893	Open in IMG/M
3300027370\|Ga0209010_1005164	Not Available	2680	Open in IMG/M
3300027590\|Ga0209116_1134317	Not Available	540	Open in IMG/M
3300027619\|Ga0209330_1003774	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300027698\|Ga0209446_1004990	Not Available	3269	Open in IMG/M
3300027767\|Ga0209655_10096635	Not Available	982	Open in IMG/M
3300027767\|Ga0209655_10189356	Not Available	678	Open in IMG/M
3300027795\|Ga0209139_10079178	Not Available	1154	Open in IMG/M
3300027824\|Ga0209040_10031976	All Organisms → cellular organisms → Bacteria	3319	Open in IMG/M
3300027824\|Ga0209040_10296143	Not Available	790	Open in IMG/M
3300027867\|Ga0209167_10303522	Not Available	863	Open in IMG/M
3300027869\|Ga0209579_10045985	Not Available	2334	Open in IMG/M
3300027869\|Ga0209579_10806772	Not Available	507	Open in IMG/M
3300027884\|Ga0209275_10370885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300027889\|Ga0209380_10028059	Not Available	3173	Open in IMG/M
3300027889\|Ga0209380_10162822	Not Available	1306	Open in IMG/M
3300027895\|Ga0209624_10048951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → unclassified Hyalangium → Hyalangium sp. H56D21	2703	Open in IMG/M
3300027908\|Ga0209006_10795408	Not Available	767	Open in IMG/M
3300028037\|Ga0265349_1019200	Not Available	618	Open in IMG/M
3300028906\|Ga0308309_10358049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300028906\|Ga0308309_11367663	Not Available	607	Open in IMG/M
3300029636\|Ga0222749_10484738	Not Available	667	Open in IMG/M
3300029999\|Ga0311339_10172930	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300030494\|Ga0310037_10092549	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300030879\|Ga0265765_1001600	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	2101	Open in IMG/M
3300031057\|Ga0170834_113371054	Not Available	629	Open in IMG/M
3300031122\|Ga0170822_16757767	Not Available	514	Open in IMG/M
3300031234\|Ga0302325_10036341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	10043	Open in IMG/M
3300031708\|Ga0310686_101851367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1864	Open in IMG/M
3300031708\|Ga0310686_102074838	All Organisms → cellular organisms → Bacteria	11361	Open in IMG/M
3300031708\|Ga0310686_103384049	All Organisms → cellular organisms → Bacteria → Proteobacteria	4591	Open in IMG/M
3300031708\|Ga0310686_108602273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1172	Open in IMG/M
3300031715\|Ga0307476_10748130	Not Available	724	Open in IMG/M
3300031754\|Ga0307475_10542946	Not Available	933	Open in IMG/M
3300031754\|Ga0307475_11054454	Not Available	637	Open in IMG/M
3300032174\|Ga0307470_11925529	Not Available	504	Open in IMG/M
3300032892\|Ga0335081_10748520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Stigmatella	1177	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.61%
Aquatic	Environmental → Aquatic	16.52%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	16.52%
Peat	Environmental → Terrestrial → Peat	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.13%
Loam	Environmental → Terrestrial → Soil → Loam	18.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	12.17%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.61%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300003352	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1005489941	3300002245	Forest Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVX*
JGIcombinedJ26739_1015667031	3300002245	Forest Soil	GRNRRTRNLPLREETMRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPXGLH*
JGI26342J46808_10059912	3300003220	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAASSSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH*
JGI26345J50200_10015651	3300003352	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAASSSASAQMADKDXAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH*
JGIcombinedJ51221_103065252	3300003505	Forest Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVQ*
Ga0062385_109122171	3300004080	Bog Forest Soil	FREEIMRKPAIVALILIAGTISPLRCGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSTQDPHAVADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGLH*
Ga0062384_1006680371	3300004082	Bog Forest Soil	MRKIAIVALMVVAGMSTPVQFGVSYAQPAPEAAATSAMADKDSAMKTLADAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGLH*
Ga0062387_1016796851	3300004091	Bog Forest Soil	GMSGPAQFGVSYAQPAPEAAAPAAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVATPPGLH*
Ga0062389_1046465021	3300004092	Bog Forest Soil	LMAGMSGPAQFGVSYAQPAPEAAAPAAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVATPPGLH*
Ga0062386_1004562621	3300004152	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAAISSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH*
Ga0062386_1007336262	3300004152	Bog Forest Soil	MRKIAIVALMVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0066388_1053114451	3300005332	Tropical Forest Soil	MRKVAIAVLTAIIGVSVPIQFGVSFAQPAPEAAATGAMADKDSAMKTLAHAKKHFRLMRKHSSQDPHAQADLDLKIKQVDDLMAKLKKGEQVPQSDIDAAVATPAGLH*
Ga0070710_109962401	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLAIVALIVMAGTIGPIQFGVSFAQPAPEAAASSSASTQTADKDSAMKTLADAKKRFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVTTPPGLH*
Ga0070731_100861263	3300005538	Surface Soil	MRKTAIVALLVMAGMSGPVQSGVSYAQPAPEAAAPSAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIRHINGVMAKLKKGQDVPQSDVDAAVATPPGLH*
Ga0070731_107810351	3300005538	Surface Soil	MRKSAIAALIVMAGMISPIQSGLSYAQPAPGAAASGPASTQMADKDSAMKSLADAKKKFRLMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAIATPSGMH*
Ga0070733_103201382	3300005541	Surface Soil	MRKPAIVALIVMAATISPIQLGVSFAQPAPAPAASSSPSTQMADKASAMKTLADAKKRFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPAGLH*
Ga0070732_106599861	3300005542	Surface Soil	MRKPAIVALIVMAGMICPIQLGVSFAQPAPEAAASSSASTQMADKDSAMKTLAAAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEGVPQSDVDAAVATPPGLH*
Ga0070761_103583712	3300005591	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0070763_109456641	3300005610	Soil	FPVADGRENMRKIAIVALVVMAGMSAPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPPGLH*
Ga0070766_101095163	3300005921	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH*
Ga0070765_1002604821	3300006176	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAK
Ga0070765_1017846291	3300006176	Soil	MQKIAIVALIVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAVKTLEDAKKRFKLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDV
Ga0116224_105590131	3300009683	Peatlands Soil	MRKIAIVALVVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0126373_100515894	3300010048	Tropical Forest Soil	MRKVAIAVLTAIIGVSVPIQFGVSFAQPAPEAAASGAMADKDSAMKTLAHAKKHFRLMRKHSSQDPHAQADLDLKIKQVDDLMAKLKKGEQVPQSDIDAAVATPAGLH*
Ga0074045_101565642	3300010341	Bog Forest Soil	MRKIAIVALMVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRSMRKHSSQDPHAQADLDRQIEQINGLMAKLKKGEDVPQSDVDAAVATPPGVH*
Ga0074044_100547183	3300010343	Bog Forest Soil	MAGMIGPIQFGVSFAQPAPAAAASSSASSQMADKDSAMKTLADAKKRFRTMRKHNSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVTTPPGVQ*
Ga0126370_118071021	3300010358	Tropical Forest Soil	MRKTAIVALVMMAGVSTPVQFGVSYAQPAPEAAASSAMADKATAMKTLADAKKKFKFMRQKSSQDPHAQADLDRQIKQINGLMAKLKKGEEVPQSDVDAA
Ga0150983_141420521	3300011120	Forest Soil	MAGMVSPIQLGVSFAQPAPAAAASSAASTQMADKDSAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH*
Ga0137363_108836451	3300012202	Vadose Zone Soil	MAGMITPIQFGVSLAQPAPAAAAGSSASAQMADKDSAMKSLADAKKHFRTMRKHSSQDPHAQSDLDSQIKQINGVMAKLKEGESVPQSDVDAAIATPSGLH*
Ga0181537_105524942	3300014201	Bog	KPAIVALILLAGTISPLKFGVSFAQPAPGAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDGQIKQINGLMAKLKKGEDVPQSDVDAAVTTPPGLH*
Ga0187879_103774482	3300017946	Peatland	MRKPAIVVLIVIAVTTSPIRTGVSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRRHSSQDVHAQADLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0187884_103690271	3300018009	Peatland	VSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRRHSSQDVHAQSDLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0187885_105502111	3300018025	Peatland	MRKPAIVVLIVIAVTTSPIRTGVSLAQPAPDASASSSANTQMADKDSALKTLADAKKRFRTMRRHSSQDVHAQADLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0187871_100628163	3300018042	Peatland	MRKPAIVVLIVIAVTTSPIRSGVSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRRHSSQDVHAQADLDRQIKQINGLMAKIKKGEDVPQSDVDAAVATPPGVH
Ga0210407_101459963	3300020579	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0210407_110817471	3300020579	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDAQIKQINGLMAKLKKGEEVPQSDVDAAVATPSGVH
Ga0210403_100248506	3300020580	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVVTPPGLH
Ga0210399_110055891	3300020581	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPAAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0210399_111724571	3300020581	Soil	QTNSKSALKRGTMRKPAIVALIVMAATISPIQFGVSFAQPAPEPAASSPAAAQMADKDSATKTLTAAKKRFRMMRKHSSQDPHAQADLDRQITQINGLMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210395_109149602	3300020582	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKG
Ga0210401_106344882	3300020583	Soil	IVMAGAISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGESVPQSDVDAAVATPAGVH
Ga0210401_116037242	3300020583	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAATSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADL
Ga0210405_103615762	3300021171	Soil	MRKPAIVALIVMAGAISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGESVPQSDVDAAVATPAGVH
Ga0210405_103676712	3300021171	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVQ
Ga0210405_109219151	3300021171	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSSASTQMADKDSAMKTLADAKKRFRIMRKHSSQDPHAQADLDAQIKQINGLMAKLKKGEQVPQSDVDAAVATPSGLH
Ga0210408_106841722	3300021178	Soil	MRKIAIVALVVMAGMSAPVQFGVSYAQPAPGAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0210408_113956431	3300021178	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINDVMAKLKKGE
Ga0210396_101367063	3300021180	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210396_113427021	3300021180	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINAVTAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210388_113669431	3300021181	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGESVPQSDVDAAVTTPAGLH
Ga0210393_1000123410	3300021401	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0210385_100420642	3300021402	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAATSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210385_104269292	3300021402	Soil	MRKPAIVALILIAGTISPLRYGVSFAQPAPGAAASSAASTQMADKDSALKTLADAKKRFRTMRKHSTQDLHQVADLDRQIKQINTLTAKLKKGEDVPQSDVDAAVATPPSVH
Ga0210385_106818432	3300021402	Soil	MRKIAIVVLMVMAGMSTPVQFGMSYAQPAPEAAGTSAMADKDSAMKTLGDAKKRFKFMRAKSSQDPHAQADLDRQIKQINGLMAKFKKGEDVPQSDVDAAVATPPGLH
Ga0210397_109677761	3300021403	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAMKTLADAKKRFRIMRKHNTQDLHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210389_101743651	3300021404	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAG
Ga0210387_113854672	3300021405	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210386_102496922	3300021406	Soil	MRKPAIVALIVMVGTISPIQLGVSFAQPAPAAAASSAASTQMEDKDSAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGESVPQSDVDAAITTPTGQH
Ga0210383_1000042416	3300021407	Soil	MRKPAIVALIVMAATISPIQFGVSFAQPAPEPAASSPAAAQMADKDSATKTLTAAKKRFRMMRKHSSQDPHAQADLDRQITQINGLMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210383_117063292	3300021407	Soil	NIRTQKLPLREETMRKTAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEAVPQSDVDAAVATPTGLH
Ga0210394_100349452	3300021420	Soil	MRKSAIVALIVMAGTISPIQFGVSFAQPAPEPAASSSASTQMADKDSAMKTLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0210394_117098962	3300021420	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIK
Ga0210384_113777632	3300021432	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEAVPQSDVDAAIATPPGLH
Ga0210390_102522762	3300021474	Soil	MRKPAIVALILMAGTISPLQFGVSYAQPAPGAAASSAASTQMADKDAAMKTLADAKKRFRIMRKHNTQDLHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0210390_114637631	3300021474	Soil	MRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRMMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGESVPQSDVDAAVTTPAGLH
Ga0210390_115160342	3300021474	Soil	MRKPAIVALILIAGTISPVRYGVSFAQPAPEAAASSAASTQMADKDSALKTLADAKKRFRTMRKHSTQDLHQVADLDRQIKQINTLTAKLKKGEDVPQ
Ga0210402_107929791	3300021478	Soil	MRKPAIVALIIMAGTISPIQFGVSFAQPAPAAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVVTPPGLH
Ga0210402_111418611	3300021478	Soil	SPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210410_112916491	3300021479	Soil	NLPLREENMRKPAIVALIVMAGTISPIQLGVSFAQPAPAAAASSPASTQMADKDAAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0210410_117026871	3300021479	Soil	MRKTAIVALIVIAGTISPIQFGVSFAQPAPGAAASSSASTQMADKDSAKKALADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAG
Ga0210409_101796881	3300021559	Soil	RKPAIALIIMAGTISPIQFGVSFAQPAPAAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0126371_100201534	3300021560	Tropical Forest Soil	MRKTAIVALVMMVGVSTPVQFGVSYAQPAPEAAASSAMADKATAMKTLADAKKKFKFMRQKSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0242655_102855901	3300022532	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0242673_10990881	3300022716	Soil	DSKSALKEANMRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0242657_11992521	3300022722	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0228598_10796951	3300024227	Rhizosphere	MRKSAIVALIVMAGTISPIQFGVSYAQPAPEAAASSSASTQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEAVPQSDVDAAVATPAGLH
Ga0224564_10406111	3300024271	Soil	MRKPAIVALIVMAGMISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINDLTAKLKKGEGVPQSDVDAAVATPAGLH
Ga0209010_10051643	3300027370	Forest Soil	MRKPAIVALILMAGTISPLQFGVSFAQPAAGAAASSAASTQMADKDSAMKTLADAKKRFRTMRKHSTQDLHAVADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209116_11343171	3300027590	Forest Soil	MRKPAIIALIVIAVTISPIRSGVSLAQPAPDASASSSANTQMADKDSAMKTLADAKKRFRTMRKHSTQDLHAVADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209330_10037741	3300027619	Forest Soil	MRKPAIVALILMAGTISPLQFGVSYAQPAPGAAASSAASTQMADKDSAMKTLADAKKRFRIMRKHNTQDLHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209446_10049903	3300027698	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAASSSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH
Ga0209655_100966352	3300027767	Bog Forest Soil	MRKPAIVALILMAGTIGPLQFGVSFAQPAPGAAASSAASTQMADKDSAMKTLADAKKRFRTMRKHNSQDPHAQADLDRQIKQINGVMAKLKKGQDVPQSDVDAAVTTPPGVQ
Ga0209655_101893561	3300027767	Bog Forest Soil	PREETMRKPAIVALIVIAGTITPIQFGVSFAQPAPEPAASSSASAQMADKDSAMKTLAAAKKRFRTMRKHSSQDPHAQADLDRQITQINGLMAKLKKGEDVPQSDVDAAVATPSGVH
Ga0209139_100791782	3300027795	Bog Forest Soil	MRKPAIVALILIAGTISPLRCGVSFAQPAPEAAASSSASAQMADKDSAMKTLADAKKRFRTMRKHSTQDPHAVADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGLH
Ga0209040_100319763	3300027824	Bog Forest Soil	MRKIAIVALMVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0209040_102961431	3300027824	Bog Forest Soil	MRKTAIVALIVMAGTISPLRYGVSFAQPAPEPAAISSASAQMADKDSAMKMLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGVMAKLKKGEAVPQSDVDAAVATPPGLH
Ga0209167_103035221	3300027867	Surface Soil	REETMRKPAIVALIVMAATISPIQLGVSFAQPAPAPAASSSPSTQMADKASAMKTLADAKKRFRMMRKHSSQDPHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0209579_100459852	3300027869	Surface Soil	MRKTAIVALLVMAGMSGPVQSGVSYAQPAPEAAAPSAMADKDTAMKTLADAKKRFKFMRSKSSQDPHAQADLDRQIRHINGVMAKLKKGQDVPQSDVDAAVATPPGLH
Ga0209579_108067721	3300027869	Surface Soil	MRKPAIVALIVMAGMISPIQSGLSYAQPAPGAAASGPASTQMADKDSAMKSLADAKKKFRLMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0209275_103708851	3300027884	Soil	MRKIGIVALVVMAGMSAPVQFGVSYAQPAPGAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0209380_100280594	3300027889	Soil	MRKPAIVALILIAGTISPVRYGVSFAQPAPGAAASSAASTQMADKDSALKTLADAKKRFRTMRKHSTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVQ
Ga0209380_101628221	3300027889	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0209624_100489514	3300027895	Forest Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPSGLH
Ga0209006_107954082	3300027908	Forest Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRKIKQINGLTAKLKKGEDVPQSDVDAAVATPSGLH
Ga0265349_10192001	3300028037	Soil	TFVCQEQTDSKSALKEANMRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0308309_103580491	3300028906	Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPGAAASSSASAQMADKDSAMKSLADAKKKFRTMRKHSSQDPHAQADLDSQIKQINGLMAKLKKGEDVPQ
Ga0308309_113676631	3300028906	Soil	MRKPAIVALILMAGTISPLQSGVSFAQPAPEAAASSAASTQMADKDSAIKTLADAKKRFRIMRKHNTQDLHQVADLDRQIKQINSLTAKLKKGE
Ga0222749_104847381	3300029636	Soil	MRKIAIVALVVMAGMSAPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGLH
Ga0311352_113688081	3300029944	Palsa	MRKVAIVALMVMAGMSTPLQFGVSYAQPAPEAAATGAMADKVTALKTLADAKKRFRFMRKHSSQDPHAQADLDGQIKQINGLT
Ga0311339_101729303	3300029999	Palsa	MRKVAIVALMVMAGMSTPLQFGVSYAQPAPEAAATGAMADKDTALKTLADAKKRFRFMRKHSSQDPHAQADLDGQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGLH
Ga0310037_100925492	3300030494	Peatlands Soil	MRKIAIVALVVMAGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLHDAKKRFRLMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0265765_10016001	3300030879	Soil	MRKPAIVALILMAGTISPLQSGLSFAQPAPGAAASSAASTQMADKDAAMKTLADAQKRFRIMRTHKTQALHAVADLDRQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGVH
Ga0170834_1133710541	3300031057	Forest Soil	MRKTAIVALIVMAGMISPIQFGVSFAQPAPEAAASSSAGSQMADKDSATKTLTDAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0170822_167577671	3300031122	Forest Soil	MRKPAIVALIVMAWTISPIQFGVSFAQPAPGAAASSSASTQMADKDAAMKTLAAAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEEVPQSDVDAAVATPPGLH
Ga0302325_100363416	3300031234	Palsa	MVMAGMSTPLQFGVSYAQPAPEAAATGAMADKDTALKTLADAKKRFRFMRKHSSQDPHAQADLDGQIKQINGLTAKLKKGEDVPQSDVDAAVATPPGLH
Ga0310686_1018513672	3300031708	Soil	MRKSAIVALIVMALTISPIRSGVSLAQPAPEAPASSSASTQMADKDSAMKTLADAKKRFRIMRKHSSQDVHAQADLDRQIKQINGVMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0310686_1020748387	3300031708	Soil	MRKPAIVALIVMAGMISPIQFGVSFAQPAPEAAASSSASTQMADKDSAMKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINDLTAKLKKGEGVPQSDVDAAVATPSGLH
Ga0310686_1033840493	3300031708	Soil	MRKPAIVALVLMAGTISPLQFGVSFAQPAPGAAASSAASIQMADKDSAMKTLADAKKRFRTMRKHNTQDLHAVADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVATPPGVH
Ga0310686_1086022732	3300031708	Soil	MRKIKIVALMVVVGMTTPLQFGVSFAQPAPAAVASSSATSQMTDKDAAMKTLTDAKKRFRMMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVSPSDVDAAVATPPGLH
Ga0307476_107481301	3300031715	Hardwood Forest Soil	AIVALMVMAGMSAPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGMH
Ga0307476_113161811	3300031715	Hardwood Forest Soil	MRKPAIVALIVMAGTISPIQFGVSFAQPAPEAAASSSANTQMADKDSATKTLADAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAK
Ga0307475_105429462	3300031754	Hardwood Forest Soil	VPVTYVWHEYRLARPFPVADGRENMRKIAIVALMVMTGMSTPVQFGVSYAQPAPEAAATSAMADKDAAMKTLADAKKRFRTMRKHSSQDPHAQADLDGKIKQINGLMAKLKKGEDVPQSDVDAAVATPAGMH
Ga0307475_110544541	3300031754	Hardwood Forest Soil	MGMRKTAIVALIVMAWMISPIQFGESFAQPAPGAAASSSASSQMADKDSAMKTLVDAKKRFRTMRKHSSQDPHAQADLDRQIKQINGLMAKLKKGEDVPQSDVDAAVVTPPGMH
Ga0307470_119255291	3300032174	Hardwood Forest Soil	LAIVALIVMAGTIGPIQFGVSFAQPAPEAAASSSASTQTADKDSAMKTLADAKKRFRMMRKHSSQDPHAQADLDAQIKQINGLMAKLKKGEDVPQGDVDAAVATPPGLH
Ga0335081_107485201	3300032892	Soil	MRKTAIVALMVIAGMSAPVQFGVSYAQPAPEAAASSAMANKDTAMKTLMDAKKKFRFMRQKSSQDPHAQADLDRQIKQINGVMARLKKG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080271

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences