Metagenome / Metatranscriptome Family F080268

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080268
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	83 residues
Representative Sequence	EIAPATAERPVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGATLTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK
Number of Associated Samples	101
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.13 %
% of genes from short scaffolds (< 2000 bps)	98.26 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.478 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (9.565 % of family members)
Environment Ontology (ENVO)	Unclassified (26.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.76% β-sheet: 18.69% Coil/Unstructured: 63.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00753	Lactamase_B	9.57
PF13570	PQQ_3	6.96
PF00069	Pkinase	5.22
PF13442	Cytochrome_CBB3	5.22
PF13360	PQQ_2	3.48
PF07969	Amidohydro_3	2.61
PF12840	HTH_20	2.61
PF13419	HAD_2	2.61
PF03786	UxuA	2.61
PF01965	DJ-1_PfpI	1.74
PF07731	Cu-oxidase_2	1.74
PF07586	HXXSHH	0.87
PF07732	Cu-oxidase_3	0.87
PF03928	HbpS-like	0.87
PF08240	ADH_N	0.87
PF05448	AXE1	0.87
PF02518	HATPase_c	0.87
PF12704	MacB_PCD	0.87
PF00834	Ribul_P_3_epim	0.87
PF01022	HTH_5	0.87
PF02700	PurS	0.87
PF00076	RRM_1	0.87
PF08448	PAS_4	0.87
PF01512	Complex1_51K	0.87
PF00005	ABC_tran	0.87
PF01740	STAS	0.87
PF04655	APH_6_hur	0.87
PF00135	COesterase	0.87
PF04024	PspC	0.87
PF13561	adh_short_C2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	20.87
COG1312	D-mannonate dehydratase	Carbohydrate transport and metabolism [G]	2.61
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	2.61
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	0.87
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.87
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	0.87
COG1894	NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)	Energy production and conversion [C]	0.87
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.87
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG3570	Streptomycin 6-kinase	Defense mechanisms [V]	0.87
COG4656	Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit	Energy production and conversion [C]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.48 %
Unclassified	root	N/A	16.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.48 %
Unclassified	root	N/A	16.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.48 %
Unclassified	root	N/A	16.52 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.48 %
Unclassified	root	N/A	16.52 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.35 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	1.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.74 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.87 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	2.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.87 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.87 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.87 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.87 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	2.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.87 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.87 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.87 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.87 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.87 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.87 %
Acidobacteriia bacterium 12-62-4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	0.87 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.87 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_102145094	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300004092\|Ga0062389_104415732	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300004152\|Ga0062386_101283124	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300004463\|Ga0063356_103621579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300004631\|Ga0058899_11497357	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005330\|Ga0070690_100426135	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005345\|Ga0070692_10485942	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005436\|Ga0070713_101773468	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005439\|Ga0070711_100822018	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005439\|Ga0070711_101326435	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005459\|Ga0068867_101108795	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005535\|Ga0070684_100795438	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300005541\|Ga0070733_10690476	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005545\|Ga0070695_101328061	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005547\|Ga0070693_100928029	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005618\|Ga0068864_101564388	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005764\|Ga0066903_107911936	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005834\|Ga0068851_10625861	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006176\|Ga0070765_100461158	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300006176\|Ga0070765_100878899	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300006176\|Ga0070765_101399211	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006237\|Ga0097621_100105454	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300006358\|Ga0068871_100640030	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300006804\|Ga0079221_10927002	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300009098\|Ga0105245_12047826	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300009101\|Ga0105247_10270579	All Organisms → cellular organisms → Bacteria → Acidobacteria	1168	Open in IMG/M
3300009176\|Ga0105242_10425026	Not Available	1246	Open in IMG/M
3300009176\|Ga0105242_11383558	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300009176\|Ga0105242_12683599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300009177\|Ga0105248_10030414	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6029	Open in IMG/M
3300009525\|Ga0116220_10587127	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300009551\|Ga0105238_10425374	All Organisms → cellular organisms → Bacteria → Acidobacteria	1323	Open in IMG/M
3300009683\|Ga0116224_10643669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300010366\|Ga0126379_12969326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300010399\|Ga0134127_11325714	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300010403\|Ga0134123_11363711	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300012917\|Ga0137395_11014601	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300012971\|Ga0126369_11108455	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300012971\|Ga0126369_13149840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	540	Open in IMG/M
3300013104\|Ga0157370_11168743	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300014165\|Ga0181523_10530394	Not Available	649	Open in IMG/M
3300014325\|Ga0163163_11048140	Not Available	879	Open in IMG/M
3300014745\|Ga0157377_11687768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300014968\|Ga0157379_10964618	All Organisms → cellular organisms → Bacteria → Acidobacteria	811	Open in IMG/M
3300014969\|Ga0157376_11265411	Not Available	767	Open in IMG/M
3300016270\|Ga0182036_10889204	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300016319\|Ga0182033_11190011	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300016357\|Ga0182032_11535467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4	578	Open in IMG/M
3300017959\|Ga0187779_10857834	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300017995\|Ga0187816_10409708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300018013\|Ga0187873_1197385	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300018034\|Ga0187863_10543798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	651	Open in IMG/M
3300018038\|Ga0187855_10439178	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300020082\|Ga0206353_11108838	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300021168\|Ga0210406_10236712	All Organisms → cellular organisms → Bacteria → Acidobacteria	1503	Open in IMG/M
3300021168\|Ga0210406_11141303	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300021181\|Ga0210388_10876298	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300021181\|Ga0210388_11711114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300021406\|Ga0210386_11429653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300021407\|Ga0210383_10839871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300021420\|Ga0210394_11076118	Not Available	694	Open in IMG/M
3300021477\|Ga0210398_11097482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300021477\|Ga0210398_11533911	Not Available	518	Open in IMG/M
3300021478\|Ga0210402_11657716	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300021861\|Ga0213853_10395136	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300022722\|Ga0242657_1241607	Not Available	514	Open in IMG/M
3300025627\|Ga0208220_1116305	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300025912\|Ga0207707_11091397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300025913\|Ga0207695_11534107	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300025921\|Ga0207652_11000550	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300025924\|Ga0207694_11113954	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300025927\|Ga0207687_11922830	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300025928\|Ga0207700_11442394	Not Available	611	Open in IMG/M
3300025928\|Ga0207700_11760935	Not Available	545	Open in IMG/M
3300025931\|Ga0207644_10645196	Not Available	881	Open in IMG/M
3300025941\|Ga0207711_10403482	Not Available	1270	Open in IMG/M
3300025944\|Ga0207661_10565376	All Organisms → cellular organisms → Bacteria → Acidobacteria	1042	Open in IMG/M
3300026023\|Ga0207677_11935905	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300026089\|Ga0207648_11910288	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300026860\|Ga0207823_109967	Not Available	663	Open in IMG/M
3300027003\|Ga0207722_1011267	Not Available	1038	Open in IMG/M
3300027648\|Ga0209420_1155071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300027678\|Ga0209011_1157399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	636	Open in IMG/M
3300027745\|Ga0209908_10045959	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300027869\|Ga0209579_10291489	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300027908\|Ga0209006_11176662	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300028747\|Ga0302219_10378171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300028806\|Ga0302221_10447876	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300028906\|Ga0308309_10555703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300029943\|Ga0311340_10945607	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300029944\|Ga0311352_10254075	Not Available	1478	Open in IMG/M
3300029999\|Ga0311339_10440663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300030053\|Ga0302177_10081714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1896	Open in IMG/M
3300030053\|Ga0302177_10405433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	713	Open in IMG/M
3300030618\|Ga0311354_10707979	All Organisms → cellular organisms → Bacteria → Acidobacteria	962	Open in IMG/M
3300031028\|Ga0302180_10502602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300031236\|Ga0302324_103241318	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031525\|Ga0302326_13172382	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300031708\|Ga0310686_106533697	Not Available	732	Open in IMG/M
3300031708\|Ga0310686_117798265	Not Available	1645	Open in IMG/M
3300031715\|Ga0307476_11022288	Not Available	608	Open in IMG/M
3300031788\|Ga0302319_11187248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	707	Open in IMG/M
3300031890\|Ga0306925_11842149	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031954\|Ga0306926_11857303	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	682	Open in IMG/M
3300031962\|Ga0307479_10837945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	894	Open in IMG/M
3300031962\|Ga0307479_10977861	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300032001\|Ga0306922_10771729	Not Available	1007	Open in IMG/M
3300032261\|Ga0306920_103600258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	571	Open in IMG/M
3300032515\|Ga0348332_13952083	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300032828\|Ga0335080_10737329	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300032892\|Ga0335081_12300656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	564	Open in IMG/M
3300033158\|Ga0335077_11643414	Not Available	609	Open in IMG/M
3300033412\|Ga0310810_10743931	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300033486\|Ga0316624_10670454	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300033887\|Ga0334790_185163	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.26%
Host-Associated	Host-Associated	21.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.43%
Plants	Host-Associated → Plants	21.74%
Aquatic	Environmental → Aquatic	7.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.91%
Peat	Environmental → Terrestrial → Peat	11.30%
Freshwater	Environmental → Aquatic → Freshwater	7.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.22%
Roots	Host-Associated → Plants → Roots	2.61%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.17%
Loam	Environmental → Terrestrial → Soil → Loam	20.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.22%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.22%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.35%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.87%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.87%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026860	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1021450941	3300004092	Bog Forest Soil	VGLSHIGIWPQDLKATVASLRAHGVKVDDPRTGSTMTSITNAIDPNGVRLELLDFLPGSLPKKAMDEWK*
Ga0062389_1044157322	3300004092	Bog Forest Soil	RDTFLELAPSTDTRPVGLSHIGIWPEDQAAAIASLRQHGVKVDDPRVGSTKTSITNVIDPNGVRLELVDFLPGSLPRKAIDEFK*
Ga0062386_1012831241	3300004152	Bog Forest Soil	TADRPVGLSHIGIWPENQLAAVATLRERGVTVADPRTGSTKTSITNVIDPNGVRLELVDFLAGSLPKKAIDDWKQ*
Ga0063356_1036215792	3300004463	Arabidopsis Thaliana Rhizosphere	GLSHVGIWPENLTASVAALRQRGAQVADPRTGATLTSITNVTDPNGVRLEFLDFLAGSAPRKAIEDWK*
Ga0058899_114973571	3300004631	Forest Soil	LELAPANAQRTAGLSHVGMWPQDLTATVAALRQRGVQVVDPRTNNLTSITNVTDPNGVRLELLDFLPGSDTRKAIDAWK*
Ga0070690_1004261351	3300005330	Switchgrass Rhizosphere	TQIVGLREAFTIRDTSGKPTLSYLQISKDTFLEIAPATADRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0070692_104859421	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	PATADRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0070713_1017734682	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LEVAPASGDRTPGLSHVGIWPENLSTTVAGLRRRGVTVADPRTGSTQTSITNVTDPNGIRLELLDFLPGSLPRKAMDEWK*
Ga0070711_1008220182	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IAPATGDRTAGLSHVGIWPENLAATVALLRQRGVKVDDPRTGATLTSITNVTDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0070711_1013264352	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VGLSHIGIWPENLAATVALLRQRGVKVDDPRTGSTLTSITNATDPNGIRLELLDFLPGSLPKKAMDEWK*
Ga0068867_1011087952	3300005459	Miscanthus Rhizosphere	AGLSHVGIWPDDLNKTVASLRQRGIKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0070684_1007954382	3300005535	Corn Rhizosphere	LTYLQITKDTFLEIAPATGDRAVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGSTQTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0070733_106904761	3300005541	Surface Soil	GLSHIGIWPEDLTAAVTALRSHGVMVADPRTGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAMDEYK*
Ga0070695_1013280612	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ERPVGLSHIGIWPTNHPAAVGEMRKRGITVPDPRTGANLTSITNVTDPNGIRLEFLDFLEGSEPKKAMDRWK*
Ga0070693_1009280292	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	KEAFTIKDAAGKPTLSYLQITKDTFLEIAPATGDRAVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGSTQTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0068864_1015643882	3300005618	Switchgrass Rhizosphere	QISKDTFLELAPATAERPAGLSHVGIWPEDLNKTVASLRQRGVKVDDPRTGATRTSITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0066903_1079119361	3300005764	Tropical Forest Soil	AERPAGLSHIGIWPDDLSAAVAALRQRGVNVADPRTGATKTSITNVTDPNGVRLELLDFLPDSLPRKAIETFPSRER*
Ga0068851_106258611	3300005834	Corn Rhizosphere	GLSHVGIWPENLAATVASLRQRGIRVDDPRTGATLTSITNVTDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0070765_1004611581	3300006176	Soil	LAYLQITRDTFLELAPATADRPVGLSHIGIWPENQAAAVATLRERGVTVADPRVGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAMDDWKQ*
Ga0070765_1008788991	3300006176	Soil	YLQINKDQFLELAPATAERPAGLSHVGIWPENLTAVVAALRARGVKVEDPRTGATKTSITNVTDPNGVRLEFLDFLEGSAPKKAIDEWK*
Ga0070765_1013992111	3300006176	Soil	SHIGIWPEDLSATIAALREHGVQVNDPRTGSTKTSITNVTDPNGVRLELVDFLPGSLPRKAMEDWKK*
Ga0097621_1001054541	3300006237	Miscanthus Rhizosphere	QINKDTFLEIAPATADRPAGLSHVGIWPDDLNKTVASLRQRGIKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0068871_1006400301	3300006358	Miscanthus Rhizosphere	TGDRAVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGSTLTSITNATDPNGIRLELLDFLPGSLPKKAMDEWK*
Ga0079221_109270022	3300006804	Agricultural Soil	TGDRPVGLSHVGIWPENLAATVALLRQRGVKVDDPRTGATLTSITNVTDPNGIRLELLDFLPGSLPRKAMDDWK*
Ga0105245_120478262	3300009098	Miscanthus Rhizosphere	APATGDRAVGLSHIGIWPENLAATVALLRQRGVKVDDPRTASTGSSITNVTDPNGIRLELVDFLPGSLPKKAMDDWK*
Ga0105247_102705791	3300009101	Switchgrass Rhizosphere	KPTLSYLQINKDTFLEIAPATADRPAGLSHVGIWPEDLNKTVASLRQRGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0105242_104250261	3300009176	Miscanthus Rhizosphere	AERPVGLSHIGILPDDLNRTVAALRSRGVKMNDPATGKTLTTITNATDPNGVRLELLDFLPGSLPRKAIDEWK*
Ga0105242_113835581	3300009176	Miscanthus Rhizosphere	EIAPATAERPVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGATLTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0105242_126835991	3300009176	Miscanthus Rhizosphere	ATADRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0105248_100304145	3300009177	Switchgrass Rhizosphere	SHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0116220_105871272	3300009525	Peatlands Soil	KDQSGKPTLAYLQITRDTFLELAPATAERPVGLSHIGIWPENLNATIATLRQRGVKVDDAKTGSTKTSITNAIDPNGVRLELLDFLPDSLPGLAMDSWK*
Ga0105238_104253741	3300009551	Corn Rhizosphere	SYLQITKDTFLEIAPATGDRAVGLSHIGIWPENLSTTVALLRQHGVKVDDPRTGATLTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0116224_106436692	3300009683	Peatlands Soil	EAFTIKSPEGKPVLAYLQITRDTFLELAPATAERPVGLSHVGIWPEDMAASVAALRQHGVQVNDPRTGSTKTSITNVTDPNGVRLELVDFLPGSLPRKAMDEWKK*
Ga0126379_129693262	3300010366	Tropical Forest Soil	PAGLSHIGIWPEDLSAAVAALRQRGLNVADPRTGATKTSITNVTDPNGVRLELLDFLPDSLPRKAIETFPSRER*
Ga0134127_113257141	3300010399	Terrestrial Soil	QINKDNFLELALATAERPVGLSHVGIWPENLAATVASLRQRGIRVDDPRTGATLTSITNVTDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0134123_113637112	3300010403	Terrestrial Soil	TIKDAAGKPTLSYLQITKDTFLEIAPATGDRVVGLSHVGIWPENLAASVALLRQRGVKVDDPRTGATLTSITNVTDPNGIRLELLDFLPGSAPKKAMDDWK*
Ga0137395_110146012	3300012917	Vadose Zone Soil	PSTAERPVGLSHIGIWPEDLKGAVVALRQRGVKVDDPRTGATKTSITNVIDPNGVRLELLDFLEGSAPKQAIDNWK*
Ga0126369_111084551	3300012971	Tropical Forest Soil	GTRPVGLSHVGIWPYNLSDTVAALRAKGVKVDDPRTGATKTSITNATDPNGVRLELLDFLPDSLPRKAMDDWK*
Ga0126369_131498401	3300012971	Tropical Forest Soil	PVGLSHIGIWPVNLNTAVTTLRQRGVKVDDPRTGSTKTSITSVMDPNGIRLELLDFLEGSAPKKAIDEWRP*
Ga0157370_111687432	3300013104	Corn Rhizosphere	GIWPEDLNKTVASLREHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0181523_105303941	3300014165	Bog	HIGFWPVDLNAAVTALRQRGVKIDDPRTGATKTSITNVIDPNGIRLEMLDFLPGSLPRKAIDDWK*
Ga0163163_110481401	3300014325	Switchgrass Rhizosphere	ASGKPTLAYLQINKDQFLEIAPASAERPVGLSHIGILPDDLNRTVAALRSRGVKMNDPATGKTLTTITNATDPNGVRLELLDFLPGSLPRKAIDEWK*
Ga0157377_116877681	3300014745	Miscanthus Rhizosphere	GKPTLSYLQISKDTFLEIAPATADRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK*
Ga0157379_109646182	3300014968	Switchgrass Rhizosphere	FTVKDAAGKPTLTYLQITKDTFLEIAPATGDRAVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGSTQTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0157376_112654111	3300014969	Miscanthus Rhizosphere	HIGIWPENLAATVALLRQRGVKVDDPRTGATLTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK*
Ga0182036_108892042	3300016270	Soil	GIWPYNLSDTVAALRAKGVKVDDPRTGSTKTSITNAMDPNGVRLELLDFLPDSLPRKAMDAWK
Ga0182033_111900112	3300016319	Soil	LSYLQISKDTFLELAPAGTRPVGLSHVGIWPYNLGDTVAALRAKGVKVDDPRTGATKTSITNATDPNGVRLELLDFLPDSLPRKAMDDWK
Ga0182032_115354671	3300016357	Soil	KPTLSYLQISKDTFLELAPAGTRPVGLSHVGIWPYNLGDTVAALRAKGVKVDDPRTGATKTSITNAMDPNGVRLELLDFLPDSLPRKAMDAWK
Ga0187779_108578342	3300017959	Tropical Peatland	GDRPVGLSHVGLWPMDLGSTVAKLRERGVKVDDPRTGSTKTSITNAIDPNGIRLELLDFLPESLPRKAMENWK
Ga0187816_104097082	3300017995	Freshwater Sediment	PNGKPVLAYLQITRDTFLELAPATADRPVGLSHIGIWPENQLAAVATLRARGVTVADPRVGSTKTSITNVIDPNGVRLELVDFLAGSLPKKAMDDWKQ
Ga0187873_11973852	3300018013	Peatland	LAYLQITRDTFLELAPATAERPAGLSHIGIWPEDLTATVAALRSHGVMVADPRTGSTKTSITNVIDPNGVRLELVDFLAGSLPKKAIDDWKQ
Ga0187863_105437981	3300018034	Peatland	ARPVGLSHIGIWPENLNATVSALREHMVDVDDPRPGSTKASITNLIDPNGVRLELVDFPPGSLARKAMDDWKQ
Ga0187855_104391781	3300018038	Peatland	PVLAYLQITRDTFLELAPASAARPVGLSHVGIWPENLNATVSALREHMVDVDDPRPGSTKASITNLIDPNGVRLELVDFPPGSLARKAMDDWKQ
Ga0206353_111088382	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LTYQQINKDTFLELDPATAERPVGLSHVGIWPANLPATVASLRQRGIRVEDPRTGATLTSITNVTDPNGIRLELLDFLPGSLPKKAMDDWK
Ga0210406_102367121	3300021168	Soil	TAERPVGLSHIGIWPENLAATVAALRQRGVKIDDPRTGATLTSITNVTDPNGIRLELLDFLPGSLPRKAIDEWK
Ga0210406_111413031	3300021168	Soil	YLQINRENFLELAPATAERPAGLSHVGIWPTDLTATVAALRQRGVTVADPRTGSTKTSITNVMDPNGVRLELLDFLPGSLPRKAMDDWK
Ga0210388_108762981	3300021181	Soil	TAERPVGLSHIGLWPEDQNATVAALRERGVKVADPRTGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAMDEWKQ
Ga0210388_117111142	3300021181	Soil	SHIGFWPVDLNAAVAALRQRGVTVADPRTGSTKTSITNVTDPSGVRLELLDFLPGSLPRIAIDSWK
Ga0210386_114296531	3300021406	Soil	GLSHIGIWPQDMTASITALRAHGVTVADPRTGSTKTSITNVTDPNGVRLELVDFLPGSLPRKAIDDFK
Ga0210383_108398711	3300021407	Soil	EAFTIKNGEGKPVLAYLQITRDTFLELAPATAERPVGLSHIGIWPENQMATVAALREHGVKVDDPRVGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAIDDWKQ
Ga0210394_110761182	3300021420	Soil	KDTFLELAPATADRPVGLSHIGIWPQNLTAAIATLRQRGLKVDDAKTGSTKTSITNVLDPNGVRLELLDFLPGSLPRQAIDNWK
Ga0210398_110974822	3300021477	Soil	DGKPVLAYLQITRDTFLELAPSTAERPVGLSHIGIWPLDQGATVATLRARGVKVDDPRVGSTKTSITNVIDPNGVRLELVDFLPGSLPRKAIDEWKP
Ga0210398_115339112	3300021477	Soil	LSHIGIWPENQSAAVAMLRERGVKVDDPRVGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAIDDWKQ
Ga0210402_116577161	3300021478	Soil	AFSLKDKDGNPAITYLQISRDTFLELAPANAQRPAGLSHVGIWPDDLNATVLELRQRGVKVDDPRVTSSKSSITSVLDPNGVRLELLNILPDSLQRKAIDSWR
Ga0213853_103951361	3300021861	Watersheds	KDGKPTLSYLQISKDTFLELAPANARPVGLSHVGIWPYDLSSTVAALRARGVKVEDPRTGATKTSITNATDPDGVRLELLDFLPGSLPRKAMDDWK
Ga0242657_12416071	3300022722	Soil	PTLAYLQITRDTFLELAPASAERPVGLSHIGIWPENQNATVAALRQRGVQVNDPRVGSTKTSITNVTDPNGVRLELVDFLPGSLPRKAMDDWKQ
Ga0208220_11163052	3300025627	Arctic Peat Soil	PVGLSHVGIWPENMSATVAALRERGVKVADPRTGSTKTSITNVFDPNGVRLELVDFLAGSLPKKAIDDWKQ
Ga0207707_110913972	3300025912	Corn Rhizosphere	EAFTVRDANGKPTLSYLQISKDTFLEIAPATTDRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK
Ga0207695_115341071	3300025913	Corn Rhizosphere	VGLREAFTIRDTSGKPTLSYLQISKDTFLEIAPATADRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK
Ga0207652_110005502	3300025921	Corn Rhizosphere	GKPTLSYLQISKDTFLEIAPATADRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK
Ga0207694_111139542	3300025924	Corn Rhizosphere	YLQITKDTFLEIAPATAERPVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGATLTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK
Ga0207687_119228301	3300025927	Miscanthus Rhizosphere	PVGLSHIGIWPENLAATVALLRQRGVKVDDPRTGATLTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK
Ga0207700_114423941	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	KEAFTIKDNAGKPTLSYLQITKDTFLEVAPATGDRTPGLSHIGIWPENLSATVAGLRQRGVNVADPRTGSTKTSITNVTDPNGIRLELVDFLPDSLPRKAMDSWR
Ga0207700_117609352	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LQITRDTFLEVAPASGDRTPGLSHVGIWPENLSTTVAGLRRRGVTVADPRTGSTQTSITNVTDPNGIRLELLDFLPGSLPRKAMDEWK
Ga0207644_106451962	3300025931	Switchgrass Rhizosphere	DRPATADRPVGLSHVGIWPEDLNKTVASLRQHGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK
Ga0207711_104034822	3300025941	Switchgrass Rhizosphere	PTLAYLQINKDQFLEIAPATAERPVGLSHIGILPDDLNRTVAALRSRGVKMNDPATGKTLTTITNATDPNGVRLELLDFLPGSLPRKAIDEWK
Ga0207661_105653761	3300025944	Corn Rhizosphere	DAAGKPTLTYLQITKDTFLEIAPATGDRAVGLSHVGIWPENLAATVALLRQRGVKVDDPRTGSTQTSITNATDPNGIRLELLDFLPGSLPKKAMDDWK
Ga0207677_119359051	3300026023	Miscanthus Rhizosphere	IKDAAGKPTLSYLQITKDTFLEIAPATGDRVVGLSHVGIWPENLAASVALLRQRGVKVDDPRTGATLTSITNVTDPNGIRLELLDFLPGSAPKKAMDDWK
Ga0207648_119102881	3300026089	Miscanthus Rhizosphere	ADRPAGLSHVGIWPEDLNKTVASLRQRGVKVDDPRTGATKTTITNATDPNGVRLELLDFLPDSLPRKAMDSWK
Ga0207823_1099671	3300026860	Tropical Forest Soil	GKPTLSYLQISKDTFLELAPAGTRPVGLSHVGIWPYNLSDTVAALRAKGVKVDDPRTGATKTSITNAMDPDGIRLELLDFLPGSLPRKAMDDWK
Ga0207722_10112671	3300027003	Tropical Forest Soil	DTFLELAPAGTRPVGLSHVGIWPYNLSDTVAALRAKGVKVDDPRTGATKTSITNAMDPDGIRLELLDFLPGSLPRKAMDDWK
Ga0209420_11550711	3300027648	Forest Soil	HIGIWPEDLTATIAALRERGVQVNDPRTGSTKTSITNVTDPNGVRLELVDFLPGSLPKKAMEDWKK
Ga0209011_11573991	3300027678	Forest Soil	ERPAGLSHVGIWPEDLNATVAALRQRGVKVDDPRTGSTKTSITNVIDPNGVRLELLDFLPESLPRKAMDAWK
Ga0209908_100459592	3300027745	Thawing Permafrost	LELAPASAERPVGLSHIGIWPEDQNATVAALRQRGVQVNDPRVGSTKTSITNVTDPNGVRLELVDFLPGSLPRKAMEEWKK
Ga0209579_102914891	3300027869	Surface Soil	EAFTIKDQSGKPTLTYLHITRDTFLELAPATAERPAGLSHIGIWPEDLNGTVAALRQRGAKMDDPRTNNKTSITNLVDPNGVRLEFLDFLADSLPRQAMDSWKK
Ga0209006_111766621	3300027908	Forest Soil	FTIKNAEGKPTLAYLQITRDTFLELAPATADRPVGLSHIGIWPEDLTGAVTALRSHGVMVADPRTGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAMDEYK
Ga0302219_103781712	3300028747	Palsa	AYLQITRDTFLELAPATAERPVGLSHIGLWPEDQNATIAALRQRGVQVNDPRIGSTKTSITNVIDPNGVRLELVDFLPGSLPRKAIDEWKN
Ga0302221_104478761	3300028806	Palsa	LAYLQITRDTFLELAPSTAERPVGLSHIGMWPEDMSATVAILRERGVKVADPRTGSTKTSITNVTDPNGVRLELVDFLAGSLPRKAMDDWKQ
Ga0308309_105557031	3300028906	Soil	VGLSHIGIWPENQAAAVATLRERGVTVADPRVGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAMDDWKQ
Ga0311340_109456071	3300029943	Palsa	ASVARPVGLSHIGIWPENLNATVSALREHMVDVDDPRPGSTKASITNLIDPNGVRLELVDFPPGSLARKAMDDWKQ
Ga0311352_102540751	3300029944	Palsa	ELAPATADRPVGLSHIGIWPENQAAAVATLRERGVTVADPRVGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAMDDWKQ
Ga0311339_104406631	3300029999	Palsa	TLKDANGKPVLAYLQITRDTFLELAPASVARPVGLSHIGIWPENLNATVSALREHMVDVDDPRPGSTKASITNLIDPNGVRLELVDFPPGSLARKAMDDWKQ
Ga0302177_100817142	3300030053	Palsa	PVLAYLHITRDTFLELAPATAERPVGLSHIGIWPEDMGASIALLRQRGVKVDDPRTGSTKTAITNVVDPNGVRLELVDFLPASLQRKAMEEWKP
Ga0302177_104054332	3300030053	Palsa	RPVGLSHIGIWPENLNATVSALREHMVDVDDPRPGSTKASITNLIDPNGVRLELVDFPPGSLARKAMDDWKQ
Ga0311354_107079791	3300030618	Palsa	LAYLQITRDTFLELAPASVARPVGLSHIGIWPENLNATVSALREHMVDVDDPRPGSTKASITNLIDPNGVRLELVDFPPGSLARKAMDDWKQ
Ga0302180_105026022	3300031028	Palsa	ADGKPVLAYLQITRDTFLELAPATADRPVGLSHIGIWPENQAAAVATLRERGVTVADPRVGSTKTSITNVTDPNGVRLELVDFLAGSLPKKAMDDWKQ
Ga0302324_1032413181	3300031236	Palsa	IGMWPEDMSATVAILRERGVKVADPRTGSTKTSITNVTDPNGVRLELVDFLAGSLPRKAMEEWK
Ga0302326_131723821	3300031525	Palsa	SHIGFWPEDLNATVATLRGRGVKVDDPRTGSTKTSITNAIDPDGVRLELLDFLPDSLPRKAMDSWK
Ga0310686_1065336973	3300031708	Soil	IGIWPEDLNATVAALRRRGVKLDDPRTGATKTSITNATDPNGVRLELLDFLPGSLPRKAMDEWK
Ga0310686_1177982651	3300031708	Soil	LSHIGIWPEDLTVTIAALREHGVQVNDPRTGSTKTSITNVTDPNGVRLELVDFLPGSLPRKAMEDWKK
Ga0307476_110222881	3300031715	Hardwood Forest Soil	FTIRDKDGKPTLTYLQISKDTFLELAPATAERPAGLSHIGIWPENLNGTVAALRQRGVKVDDPRTGSTKTSITNAIDPNGVRLELLDFLPDSLPRKAMDEWK
Ga0302319_111872482	3300031788	Bog	EGKPVLAYLHITRDTFLELAPATAERPVGLSHIGIWPEDMGASIALLRQRGVKVDDPRTGSTKTAITNVVDPNGVRLELVDFLPASLQRKAMEEWKP
Ga0306925_118421491	3300031890	Soil	SHIGIWPVNLGNAVSALRQRGVKIDDPRTGATKTSITSVNDPNGVRLEFLDFLEGSAPKKAMDDWK
Ga0306926_118573031	3300031954	Soil	ELAPATAERPIGLSHIGIWPVDLGKAVSELRQRGVNIADPRTGATKTSITNVTDPNGVRLELLDFLEGSAPKKAMDDWR
Ga0307479_108379451	3300031962	Hardwood Forest Soil	ANAQRPAGLSHVGIWSDDLNATVSELRQRGIKVDDPRITSSKSSITNVTDPNGVRLELLNVLPDSLQRKAIDSWR
Ga0307479_109778613	3300031962	Hardwood Forest Soil	LAPATAQRPAGLSHIGIWPEDLSATVAALRQRGVKVDDPRTGSTKTSITNVIDPNGVRLELLDFLPESLPRKAMDAWK
Ga0306922_107717292	3300032001	Soil	LQVSRDTFIELGQATADRPVGLSHIGIWPLDLNATVATLRSRGVKVDDPRTGSTKTSITNATDPSGVRLELLDFLPDSLPRKAMDEWK
Ga0306920_1036002582	3300032261	Soil	AERPVGLSHVGIWPENLNATVAAFRQRGVKVDDPRTGSTKTSITNVIDPNNVRLELLDFLPDSLPRKAIDSWK
Ga0348332_139520832	3300032515	Plant Litter	FLELAPATAEPPARLSHIGFLPEDLEAAVTALRQRGVKIDDPRTGSTKTSITNVIDPNGVRLEMLDFLPGSLPRQAIDSWK
Ga0335080_107373293	3300032828	Soil	GNPTLSYLQVSKDTFLEVAPASGDRKPGLSHIGIWPENLNKTVAELRQRGVMVADPRTGSTKTSITNATDPDGVRLELLDFLPESLPYQAMQSWK
Ga0335081_123006562	3300032892	Soil	MGFHEAFTIKDKEGKPVLAYLQINKEQFLELAPATGGRTVGLSHIGIWPFDLNGTVTALRERGVQVADPRTGSTKTSITNAMDPNGVRLELLDFLPGSMPRKAMDDWK
Ga0335077_116434141	3300033158	Soil	KPGLSHIGIWPENLNKTVAELRQRGVMVADPRTGSTKTSITNATDPDGVRLELLDFLPESLPYQAMQSWK
Ga0310810_107439311	3300033412	Soil	LTYLQINKDTFLELAPATAERPVGLSHVGIWPENLAATVASLRQRGIRVEDPRTGATLTSITNVTDPNGIRLELLDFLPGSLPKKAMDDWK
Ga0316624_106704541	3300033486	Soil	TYLQVSRDTFIEIAPATADRPAGLSHIGLWPENLGATVATLRSRGVAVNDPRTGSTKSSITNAVDPNGVRLELVDFLPDSLPRKAMEAWK
Ga0334790_185163_391_594	3300033887	Soil	LSHIGIWPEDMAGAVAALRSHGVMVADPRTGSTKTSITNVIDPNGVRLELVDFLAGSLPKKAMDEYK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences