Metagenome Family F080248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080248
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	69 residues
Representative Sequence	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTNLRFPTR
Number of Associated Samples	90
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.61 %
% of genes near scaffold ends (potentially truncated)	26.09 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.783 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (8.696 % of family members)
Environment Ontology (ENVO)	Unclassified (24.348 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.88% β-sheet: 0.00% Coil/Unstructured: 53.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00892	EamA	6.96
PF01613	Flavin_Reduct	3.48
PF01557	FAA_hydrolase	2.61
PF04307	YdjM	1.74
PF02653	BPD_transp_2	1.74
PF03372	Exo_endo_phos	1.74
PF09339	HTH_IclR	0.87
PF13367	PrsW-protease	0.87
PF07729	FCD	0.87
PF00005	ABC_tran	0.87
PF00753	Lactamase_B	0.87
PF06472	ABC_membrane_2	0.87
PF13358	DDE_3	0.87
PF13520	AA_permease_2	0.87
PF13380	CoA_binding_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	3.48
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	1.74
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.87
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.78 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.78 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.78 %
Unclassified	root	N/A	5.22 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.17 %
Unclassified	root	N/A	5.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	84.35 %
Unclassified	root	N/A	5.22 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.04 %
Unclassified	root	N/A	5.22 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.87 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.22 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.61 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.74 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.87 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.22 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.61 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.87 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.22 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.61 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	1.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.87 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.22 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.61 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1.74 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.87 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0961475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14478058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2204	Open in IMG/M
3300000574\|JGI1357J11328_10031960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2339	Open in IMG/M
3300000956\|JGI10216J12902_107307880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1262	Open in IMG/M
3300001431\|F14TB_100580604	Not Available	530	Open in IMG/M
3300003319\|soilL2_10281583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1273	Open in IMG/M
3300004114\|Ga0062593_100872653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300004463\|Ga0063356_100810636	All Organisms → cellular organisms → Bacteria → Proteobacteria	1307	Open in IMG/M
3300004463\|Ga0063356_101247570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1083	Open in IMG/M
3300004463\|Ga0063356_104971278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300005332\|Ga0066388_100366703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2087	Open in IMG/M
3300005332\|Ga0066388_101668291	Not Available	1126	Open in IMG/M
3300005332\|Ga0066388_102201245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	995	Open in IMG/M
3300005332\|Ga0066388_102284758	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300005332\|Ga0066388_103419079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300005438\|Ga0070701_10290237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1002	Open in IMG/M
3300005441\|Ga0070700_100899318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	721	Open in IMG/M
3300005441\|Ga0070700_101893067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300005467\|Ga0070706_100804977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300005529\|Ga0070741_10000915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	97540	Open in IMG/M
3300005713\|Ga0066905_100947870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	756	Open in IMG/M
3300005764\|Ga0066903_101939393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300005764\|Ga0066903_102846788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300005764\|Ga0066903_103836523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300005764\|Ga0066903_108532738	Not Available	522	Open in IMG/M
3300005841\|Ga0068863_101679993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300005985\|Ga0081539_10202352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	916	Open in IMG/M
3300006038\|Ga0075365_10014609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4728	Open in IMG/M
3300006041\|Ga0075023_100206224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	761	Open in IMG/M
3300006042\|Ga0075368_10245231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300006057\|Ga0075026_100597243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300006178\|Ga0075367_10971404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300006845\|Ga0075421_100261440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2118	Open in IMG/M
3300007004\|Ga0079218_11705633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
3300009011\|Ga0105251_10501638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300009156\|Ga0111538_13744374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300009553\|Ga0105249_10646735	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300009553\|Ga0105249_12371597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300010359\|Ga0126376_11213883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300010360\|Ga0126372_12446345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300010371\|Ga0134125_11244110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300010391\|Ga0136847_11148037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300011432\|Ga0137428_1112689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	780	Open in IMG/M
3300011443\|Ga0137457_1303484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300011445\|Ga0137427_10184319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300012207\|Ga0137381_10536855	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300012212\|Ga0150985_109699400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300012212\|Ga0150985_119128713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300012360\|Ga0137375_10885025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300012469\|Ga0150984_107734630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300012930\|Ga0137407_10906747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300012961\|Ga0164302_11072619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300013308\|Ga0157375_12595459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300014326\|Ga0157380_10018675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5151	Open in IMG/M
3300014968\|Ga0157379_10892098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300014968\|Ga0157379_12642767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300015195\|Ga0167658_1011602	Not Available	2689	Open in IMG/M
3300015371\|Ga0132258_11921058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1490	Open in IMG/M
3300015374\|Ga0132255_101395243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1058	Open in IMG/M
3300016387\|Ga0182040_11469989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	578	Open in IMG/M
3300017792\|Ga0163161_11972033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300017936\|Ga0187821_10188598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300017944\|Ga0187786_10622906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300017947\|Ga0187785_10265764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	775	Open in IMG/M
3300017970\|Ga0187783_10038767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3530	Open in IMG/M
3300017970\|Ga0187783_10219922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1392	Open in IMG/M
3300017970\|Ga0187783_10403958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300017970\|Ga0187783_11306449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300018060\|Ga0187765_10626589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300018063\|Ga0184637_10156934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1403	Open in IMG/M
3300018422\|Ga0190265_10009739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7141	Open in IMG/M
3300018422\|Ga0190265_10229638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1889	Open in IMG/M
3300018429\|Ga0190272_12832027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300018429\|Ga0190272_13061860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300018469\|Ga0190270_10424787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1240	Open in IMG/M
3300019360\|Ga0187894_10055608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2293	Open in IMG/M
3300021080\|Ga0210382_10561431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300021560\|Ga0126371_12185317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	668	Open in IMG/M
3300025907\|Ga0207645_10083234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2052	Open in IMG/M
3300025907\|Ga0207645_10768540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300025910\|Ga0207684_10342918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1287	Open in IMG/M
3300025986\|Ga0207658_11762050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300026035\|Ga0207703_11131054	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
3300026088\|Ga0207641_11141359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300027815\|Ga0209726_10017977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6231	Open in IMG/M
3300027815\|Ga0209726_10114389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1592	Open in IMG/M
3300027866\|Ga0209813_10178147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300027907\|Ga0207428_10054535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3183	Open in IMG/M
3300027909\|Ga0209382_10273441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1912	Open in IMG/M
3300027909\|Ga0209382_11025495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300028587\|Ga0247828_10361529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300028587\|Ga0247828_10448178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300028589\|Ga0247818_11377059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300028592\|Ga0247822_10282359	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300028597\|Ga0247820_10358082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300030620\|Ga0302046_10884948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300031198\|Ga0307500_10240641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300031543\|Ga0318516_10479794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300031562\|Ga0310886_10306548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300031576\|Ga0247727_10005466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25761	Open in IMG/M
3300031576\|Ga0247727_10385040	Not Available	1140	Open in IMG/M
3300031576\|Ga0247727_10437986	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1039	Open in IMG/M
3300031576\|Ga0247727_10638584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300031668\|Ga0318542_10770742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300031795\|Ga0318557_10423972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	612	Open in IMG/M
3300031824\|Ga0307413_10092748	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300031896\|Ga0318551_10732238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300031897\|Ga0318520_10763002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300031942\|Ga0310916_10969423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300031949\|Ga0214473_11365415	All Organisms → cellular organisms → Bacteria → Proteobacteria	723	Open in IMG/M
3300031954\|Ga0306926_12305819	Not Available	596	Open in IMG/M
3300032043\|Ga0318556_10265231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300032126\|Ga0307415_102276375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300032205\|Ga0307472_101010019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300033550\|Ga0247829_11804559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.43%
Host-Associated	Host-Associated	29.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	29.57%
Aquatic	Environmental → Aquatic	10.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.43%
Freshwater	Environmental → Aquatic → Freshwater	5.22%
Sediment	Environmental → Aquatic → Sediment	5.22%
Cave	Environmental → Terrestrial → Cave	4.35%
Roots	Host-Associated → Plants → Roots	3.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.65%
Loam	Environmental → Terrestrial → Soil → Loam	13.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.22%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.48%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Lake	Environmental → Aquatic → Freshwater → Lake	0.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.48%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	2.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.09%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	3.48%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	2.61%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.61%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.87%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09614752	2228664022	Soil	MPINWAEILWMPIGLLAGLVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGVRFPLR
ICChiseqgaiiFebDRAFT_144780583	3300000363	Soil	MPINWADILWMPIGLLAALVFVCSLIGNSLTRNAFVGSIITVIIFVAFYVFWDYYPHNLLPGVRLPLR*
JGI1357J11328_100319601	3300000574	Groundwater	MPINWSAIPLTAVGLLAALTFLASLIGHTLARNALVGAIIATIVFVAVYVFWNHYPHGLVPGVRFPA*
JGI10216J12902_1073078802	3300000956	Soil	MPINWSAIPMMAVGLLAALTFLASLIGHTLTRNAFVGAIITTIIFVAVYVFWNHYPHGLAAGIRFPG*
F14TB_1005806041	3300001431	Soil	MPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVNIFVAFYVFWDYYPHNLLPNVRLPLR*
soilL2_102815832	3300003319	Sugarcane Root And Bulk Soil	MPINWAELPMQAIGLLAGLTFVASLIGHSLTRNAFIGAILTVIIFVAVYIAWDFYPHGYLPGVRFPTRY*
Ga0062593_1008726532	3300004114	Soil	MPINWADILWMPIGLLAGLVFVCSLIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGMRLPLR*
Ga0063356_1008106362	3300004463	Arabidopsis Thaliana Rhizosphere	MPINWADIPWPVIGLLAALTFVTSLIGHSLTRNAFVGAIITVILFVAIYVFWDFYPHGLAPGIRFPTKL*
Ga0063356_1012475701	3300004463	Arabidopsis Thaliana Rhizosphere	MQLLQLGIDFGSLPWQAIGLLAGLAFICSLIGHSLTNNAFVGALIATILFVVIYIGWNFYPHPYLPNLRFPYKY*
Ga0063356_1049712782	3300004463	Arabidopsis Thaliana Rhizosphere	MQLLQLGINFGDLPWQAIGLLAGLTFVCSLIGHSLTRNAFVGAIIATILFVAIYIAWNFYPHPYLPNIRFPTKW*
Ga0066388_1003667031	3300005332	Tropical Forest Soil	MPINWAEILWMPIGLLAGLVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGVRFPLR*
Ga0066388_1016682911	3300005332	Tropical Forest Soil	MQLLQLGIDFGGLPWQAIGLLSALAFISSLIGHSLTRNAFVGAIIATIIFAAVYIAWDFYPHGYLPGVRFPYR*
Ga0066388_1022012452	3300005332	Tropical Forest Soil	MDFAVLPWQAIGLLAGLVFVASLIGNSLTKNAFVGAILTVIIFVAVYVAWDFYPHGYLPSVRFPYKY*
Ga0066388_1022847582	3300005332	Tropical Forest Soil	MPINLGDLPLQAIGLLAGLVFVASLIGNSLTKNAFVGAIITVIIFVAIYIAWDYYDHRLLEGVRFPNKYVK*
Ga0066388_1034190792	3300005332	Tropical Forest Soil	MPINWAEIPWTAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTTLRFPTRT*
Ga0070701_102902371	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTRI*
Ga0070700_1008993181	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGYRFPLR*
Ga0070700_1018930671	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RAEATDRSIAMPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTRI*
Ga0070706_1008049772	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLAGYRFPLR*
Ga0070741_1000091567	3300005529	Surface Soil	MPINWADIPWPAVGLLAGLTFLASLIGHSLTRNAFVGAIITVILFVAVYIFWDYYPHNLVPGVRFPTKI*
Ga0066905_1009478702	3300005713	Tropical Forest Soil	MPINLADLPMQAIGLLAGLVFVASLIGNSLTKNAFVGAIIAVIIFVVVYVAWDFYPHGYLPGVRFPYKY*
Ga0066903_1019393932	3300005764	Tropical Forest Soil	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTSVRFPTRI*
Ga0066903_1028467882	3300005764	Tropical Forest Soil	MAINFADVMWVPLGLLAILVFVSSLIGNSIVRNAFVGSIITVIIFVAFYIFWDYYPHNLLPGLRFPK*
Ga0066903_1038365231	3300005764	Tropical Forest Soil	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGFVTTVRFPTRV*
Ga0066903_1085327381	3300005764	Tropical Forest Soil	MQLLQLGIDFGSLPWQAIGLLAGLAFVTSLIGHSLTRNAFVGAIIATILFVAIYIAWNFYPHPYLPNLRFPTR*
Ga0068863_1016799932	3300005841	Switchgrass Rhizosphere	MPINWAEILWMPIGLLAGLVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLIPGVRFPLR*
Ga0081539_102023522	3300005985	Tabebuia Heterophylla Rhizosphere	MPINWSAIPLMAVGLLAALTFLASLIGHTLTRNAFLGAIIATVIFVAVYIFWNHYPHGLVPGVRFPA*
Ga0075365_100146091	3300006038	Populus Endosphere	MPINWADILWMPIGLLAGLVFVCSLIGNSLTRNAFVGSIITVIIFVAFYVFWDYYPHNLLPGMRLPLR*
Ga0075023_1002062242	3300006041	Watersheds	MPINWADIPWPIVGLLGALTFVASLIGHSLTRNAFVGAIITVIIFVAVYVFWDYYPHNLVPGIR
Ga0075368_102452311	3300006042	Populus Endosphere	NWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGYRFPLR*
Ga0075026_1005972431	3300006057	Watersheds	AVATDRSIAMPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTRI*
Ga0075367_109714042	3300006178	Populus Endosphere	MPINWAEILWMPIGLLAGLVFVSSVIGNSLTRNAFVGAIITVIIFVAFFVFWDYYPHNLLPGVRFPLR*
Ga0075421_1002614402	3300006845	Populus Rhizosphere	MPFNVADLPWQAIGLLAGLTFVSSLIGHSLTRNAFVGAIIAVIIFLAIYIGWNHYPHGLLPSIRFPS*
Ga0079218_117056332	3300007004	Agricultural Soil	MPFNLADLPWQAIGLLTGLAFVSSLIGNSLTRNAFVGAIVAAIIFAAVYVAWDFYPHGYLPGIRFPTR*
Ga0105251_105016381	3300009011	Switchgrass Rhizosphere	MPINWADILWMPIGLLAGLVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLIPGVRFPLR*
Ga0111538_137443741	3300009156	Populus Rhizosphere	SRSVVMPINWADILWMPIGLLAALVFVCSLIGNSLTRNAFVGSIITVIIFVAFYVFWDYYPHNLLPGVRLPLR*
Ga0105249_106467351	3300009553	Switchgrass Rhizosphere	MPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTRV*
Ga0105249_123715971	3300009553	Switchgrass Rhizosphere	MPINWGEVLWLPIGLVAALVFVSSLIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNL
Ga0126376_112138832	3300010359	Tropical Forest Soil	MQLLQLGIDFGSLPWQAIGLLSALAFISSLIGHSLTRNAFVGAIIATIIFAAIYIAWDFYPHGYLPGIRFPYR*
Ga0126372_124463451	3300010360	Tropical Forest Soil	MQLLQLGIDFGSLPWQAIGLLSALAFISSLIGHSLTRNAFVGAIIATIIFAAIYVAWDFYPHGYLPGIRFPYR*
Ga0134125_112441102	3300010371	Terrestrial Soil	MPINWADLPIQAIGLLAGLTFVASLIGNSLTRNAFVGAILTVIIFVAVYIAWDFYPHGYVPNLRFPTRY*
Ga0136847_111480371	3300010391	Freshwater Sediment	MPINWADLPWQAIGLLAGLTFVASLIGHSLTKNAFAGAIITVIIFIAIYIAWDYYPHNLLEGFRFPNRYVK*
Ga0137428_11126891	3300011432	Soil	MPINWSAIPMMAVGLLAALAFVSSLIGHTLTRNAFVGAIITTIIFVAVYVFWNHYPHGLAAGIRFPG*
Ga0137457_13034841	3300011443	Soil	MPINWSAIPMMAVGLLAALAFVSSLIGHTLTRNAFVGAIITTIIFVAVYVFWNHYPHGLA
Ga0137427_101843192	3300011445	Soil	MVPINWADIPWQAVGLLAGLAFVASLIGHSLTRNAFVGAIITVIIFVAVYIAWDFYPHNLPGPRFPTK*
Ga0137381_105368551	3300012207	Vadose Zone Soil	MPINWADIPWPVLGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTKV*
Ga0150985_1096994001	3300012212	Avena Fatua Rhizosphere	ATDRSIVMPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGYRFPLR*
Ga0150985_1191287132	3300012212	Avena Fatua Rhizosphere	GAGRAEATDRSIAMPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTRI*
Ga0137375_108850251	3300012360	Vadose Zone Soil	MPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIITVIIFAAVYVFWDFYPHGLVQGIRFPTRM*
Ga0150984_1077346301	3300012469	Avena Fatua Rhizosphere	GRAEATDRSIAMPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTRI*
Ga0137407_109067471	3300012930	Vadose Zone Soil	MPINWADIPWPAVGLLAALTFVASLIGHSLARSSVIVGAILAVIIFVAVYVFWDFYPHGLVQGVRFPTRI*
Ga0164302_110726191	3300012961	Soil	MPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGMRLPLR*
Ga0157375_125954591	3300013308	Miscanthus Rhizosphere	DILWMPIGLLAGLVFVCSLIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGMRLPLR*
Ga0157380_100186753	3300014326	Switchgrass Rhizosphere	MPIGLLAGLVFVCSLIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGMRLPLR*
Ga0157379_108920982	3300014968	Switchgrass Rhizosphere	MPINWAEILWMPLGLLAGLVFVASVIGNSLTRNAFVGAIITVIIFVAFYIFWDYYPHNLMPGVRFPMR*
Ga0157379_126427671	3300014968	Switchgrass Rhizosphere	MLPGTDEATDRSIVMPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGYRFPLR*
Ga0167658_10116023	3300015195	Glacier Forefield Soil	MPINWAEIPWTAVGLLAGLVFVSSLIGNSLIKNAVVGSILAVIIFVAAFVFWDYYPHNVLGDVRFPNRYVK*
Ga0132258_119210581	3300015371	Arabidopsis Rhizosphere	RDESIGALAMPINWSTIPMTAVGLLAALTFISSLIGHTLARNALVGAIIATIVFVAVYVFWNHYPHGLLPGVRFPA*
Ga0132255_1013952431	3300015374	Arabidopsis Rhizosphere	VLGLGLRLDLPINWAEILWMPIGLLAGLVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLIPGVRFPLR*
Ga0182040_114699891	3300016387	Soil	MPINWADIPWTAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLV
Ga0163161_119720331	3300017792	Switchgrass Rhizosphere	MPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGYRFPLR
Ga0187821_101885982	3300017936	Freshwater Sediment	MPINWSAIPLMAVGLLAGLAFVSSLIGHTLTRNAFVGAIITTIIFAAVYIFWNHYPHGLLPGIRFPG
Ga0187786_106229061	3300017944	Tropical Peatland	MPINFADLPLQAIGLLAGLVFVASLIGHSLTKNAFVGAIIAVIIFVAIYIIWDFYPHGYLPALRFPYR
Ga0187785_102657642	3300017947	Tropical Peatland	MDFASLPWLAIGLLAGLTFVASLIGNSLTKNAFVGAIITVIIFIAVFVAWDFYPHGYLPNVRFPYKY
Ga0187783_100387674	3300017970	Tropical Peatland	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTNLRFPTRT
Ga0187783_102199222	3300017970	Tropical Peatland	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTSLRFPTKT
Ga0187783_104039581	3300017970	Tropical Peatland	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTTLRFPTRT
Ga0187783_113064491	3300017970	Tropical Peatland	MPINWADIPWTAVGLLAALTFVSSLIGHSLTRNAFAGAIIAVIIFVAVYVFWDFYPHGLVTNLRFPTRT
Ga0187765_106265891	3300018060	Tropical Peatland	MPINWADIPWTAVGLLAALTFVSSLIGHSLTRNAFGGAIIAVIIFVAVYVFWDFYPHGLLPTLRFPTRV
Ga0184637_101569342	3300018063	Groundwater Sediment	MVPINWADIPWQAVGLLAGLAFVASLIGHSLTRNAFVGAIITVIIFVAVYIAWDFYPHNLPGPRFPTK
Ga0190265_100097394	3300018422	Soil	MPINWADLPLQAIGLLAGLTFIASLIGHSLTRNAFVGAILTVIIFVAIYIAWDYYPHDYLPGLRFPNRYGP
Ga0190265_102296381	3300018422	Soil	MPFNLADIPWPAVGLLAALTFVSSVIGHSLARSSVLVGAILAVIIFVAVYVFWDFYPHGLVQDVRFPNRYVK
Ga0190272_128320271	3300018429	Soil	MPFNLAEIPWTAVGLLAALTFVASLIGHSLARSSVIVGSILAVIIFIAVYVFWDYYPHNMLGDVRFPNRYVK
Ga0190272_130618602	3300018429	Soil	MPINWADLPMQAIGLLAGLVFVASLIGNSLTRNAFVGAIITVIIFVAVYIFWDFYPHNLLPGVRFPMRV
Ga0190270_104247871	3300018469	Soil	PWQAIGLLAALTFVCSLIGHSLTRNAFVGAIIATIIFIAIYIAWDYYPHGLLEGVRFPNRYRP
Ga0187894_100556083	3300019360	Microbial Mat On Rocks	MPINWAELPMQAIGLLAGLTFVASLIGHSLTRNAFIGAILTVIIFVAIYIAWDFYPHGYLPNVRFPTR
Ga0210382_105614311	3300021080	Groundwater Sediment	MPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLV
Ga0126371_121853172	3300021560	Tropical Forest Soil	MPINWADIPWTSVGLLAALTFVSSLIGHSLTRNAFGGAIIAVIIFVAVYVFWDFYPHGLMTTLRFPTRT
Ga0207645_100832342	3300025907	Miscanthus Rhizosphere	MPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHGLVQGVRFPTRI
Ga0207645_107685402	3300025907	Miscanthus Rhizosphere	MPINWADILWMPIGLLAGLVFVCSLIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGMRLPLR
Ga0207684_103429182	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLINWGEVLWVPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLAGYRFPLR
Ga0207658_117620501	3300025986	Switchgrass Rhizosphere	MPINWAEILWMPLGLLAGLVFVASVIGNSLTRNAFVGAIITVIIFVAFYIFWDYYPHNLMPGVRFPMR
Ga0207703_111310542	3300026035	Switchgrass Rhizosphere	MPINWADIPWPALGLLAALTFVASLIGHSLSRNAFVGAIIAVIIFVAVYVFWDFYPHG
Ga0207641_111413592	3300026088	Switchgrass Rhizosphere	MPINWAEILWMPIGLLAGLVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLIPGVRFPLR
Ga0209726_100179776	3300027815	Groundwater	MPINWSAIPLTAVGLLAALTFLASLIGHTLARNALVGAIIATIVFVAVYVFWNHYPHGLVPGVRFPA
Ga0209726_101143891	3300027815	Groundwater	MPINLADIPWTIVGLLAGLTFVASLIGHSLTRNAFVGAIITVIIFVAVYVFWDYYPHNVLGDVRFPNRYVK
Ga0209813_101781472	3300027866	Populus Endosphere	VMPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGYRFPLR
Ga0207428_100545351	3300027907	Populus Rhizosphere	MPINWADIPWPVIGLLAALTFVTSLIGHSLTRNAFVGAIITVILFVAIYVFWDFYPHGLAPGIRFPTKL
Ga0209382_102734412	3300027909	Populus Rhizosphere	MPFNVADLPWQAIGLLAGLTFVSSLIGHSLTRNAFVGAIIAVIIFLAIYIGWNHYPHGLLPSIRFPS
Ga0209382_110254952	3300027909	Populus Rhizosphere	MPINWADILWMPIGLLAALVFVCSLIGNSLTRNAFVGSIITVIIFVAFYVFWDYYPHNLLPGVRLPLR
Ga0247828_103615292	3300028587	Soil	MPINWGEVLWLPIGLAAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGYRFPLR
Ga0247828_104481781	3300028587	Soil	MPINWSAIPMMAVGLLAALAFVSSLIGHTLTRNAFVGAIITTIIFVAVYVFWNHYPHGLAAGIRFPG
Ga0247818_113770591	3300028589	Soil	MPINWSAIPMMAVGLLAALAFVSSLIGHTLTRNAFVGAIITTIICVAVYVFWTHYPHGLAAGIRFPG
Ga0247822_102823592	3300028592	Soil	MQLLQLGIDFGSLPWQAIGLLAGLAFICSLIGHSLTNNAFVGALIATILFVVIYIGWNFYPH
Ga0247820_103580821	3300028597	Soil	DMPINWSAIPMMAVGLLAALAFVSSLIGHTLTRNAFVGAIITTIIFVAVYVFWNHYPHGLAAGIRFPG
Ga0302046_108849482	3300030620	Soil	LPLQGIGLLAALTFLSSLIGHTLTRNAFVGAIISVIIFVAAYVFWNYYPHELMTAVRFKL
Ga0307500_102406411	3300031198	Soil	MPINWGEVLWLPIGLVAALVFVSSVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGMRLPLR
Ga0318516_104797942	3300031543	Soil	MPINWADIPWTAVGLLAALTFVSSLIGHSLTRNAFGGAIIAVIIFVAVYVFWDFYPHG
Ga0310886_103065481	3300031562	Soil	INWADIPWPVIGLLAALTFVTSLIGHSLTRNAFVGAIITVILFVAIYVFWDFYPHGLAPGIRFPTKL
Ga0247727_1000546619	3300031576	Biofilm	MPINVADLPWQAIGLLAGLTFVASLIGHSLTRNAFVGAIITVIIFVAVYIGWDYYDHRLLEGIRFPNKYVK
Ga0247727_103850402	3300031576	Biofilm	MPINVPLAELPWLAIGLLAGLTFVASLIGHSLTRNAFVGAIITVIIFAAAYIGWNYTNHNLLGDLRFPDTYGKRR
Ga0247727_104379862	3300031576	Biofilm	MPNWADLPLQAIGLLAGLTFVASLIGHSLTRNAFVGAIITVIIFVAVYIAWDFYPHGYWPSVRFPTK
Ga0247727_106385841	3300031576	Biofilm	LFLRVQQELAMGIDFAALPFQAIGLLAGLAFVASLIGNSVTKNAFVGAIITVIIFVAVYVFWDYYPHKILEGVRFPNRYGA
Ga0318542_107707421	3300031668	Soil	MPINWADIPWTAVGLLAALTFVSSLIGHSLTRNAFGGAIIAVIIFVAVYVFWDFYPHGLMTTLRFPTRI
Ga0318557_104239721	3300031795	Soil	MPINWADIPWTAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTTLRFPTRT
Ga0307413_100927481	3300031824	Rhizosphere	MQLLQLGIEFGGLPWQAIGLLAGLAFVCSLIGHSLTNNAFVGALIATVLFVAIYIAWNFYPHGYLTGIRFPDKY
Ga0318551_107322381	3300031896	Soil	MPINWADIPWTAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTNLRFPTRT
Ga0318520_107630021	3300031897	Soil	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTNLRFPTR
Ga0310916_109694231	3300031942	Soil	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTNLR
Ga0214473_113654152	3300031949	Soil	MPINWSAIPLMAVGLLAALTFLASLIGHTLTKNAFVGAIIATIVFVAVYVFWNHYPHGLVPGVR
Ga0306926_123058191	3300031954	Soil	MAINFADVMWVPLGLLAILVFVSSLIGNSIVRNAFVGSIITVIIFVAFYIFWDYYPHN
Ga0318556_102652311	3300032043	Soil	MPINWADIPWMAVGLLAALTFVSSLIGHSLTRNAFVGAIIAVIIFVAVYVFWDFYPHGLVTNLRFPTWT
Ga0307415_1022763751	3300032126	Rhizosphere	IGLLAGLAFVCSLIGHSLTNNAFVGALIATVLFVAIYIAWNFYPHGYLTGIRFPDKY
Ga0307472_1010100192	3300032205	Hardwood Forest Soil	MPINWAEILWMPIGLLAGLVFVASVIGNSLTRNAFVGAIITVIIFVAFYVFWDYYPHNLLPGVRFPLR
Ga0247829_118045591	3300033550	Soil	MPFNLADLPLQAIGLLALLAFVSSLIGHSLTRNAFVGAIITTIIFLAVYIGWDYYPHGLLGNLRFPNEYVPPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences