NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080241

Metagenome / Metatranscriptome Family F080241

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080241
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 49 residues
Representative Sequence INAATANSFVYFDSNKSLESVAAATAGDVIQWNGSSFVASNEIDGGTF
Number of Associated Samples 102
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 3.37 %
% of genes near scaffold ends (potentially truncated) 73.91 %
% of genes from short scaffolds (< 2000 bps) 57.39 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (74.783 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(27.826 % of family members)
Environment Ontology (ENVO) Unclassified
(45.217 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(83.478 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 23.68%    Coil/Unstructured: 76.32%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF13884Peptidase_S74 5.22
PF00106adh_short 2.61



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A74.78 %
All OrganismsrootAll Organisms25.22 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000117|DelMOWin2010_c10088605Not Available1176Open in IMG/M
3300000168|LPjun09P1210mDRAFT_c1007345Not Available924Open in IMG/M
3300000928|OpTDRAFT_10023369All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon20371Open in IMG/M
3300000949|BBAY94_10107824Not Available762Open in IMG/M
3300006867|Ga0075476_10242391Not Available645Open in IMG/M
3300006868|Ga0075481_10288676All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300006870|Ga0075479_10389519Not Available539Open in IMG/M
3300006922|Ga0098045_1035061Not Available1280Open in IMG/M
3300007539|Ga0099849_1285918Not Available598Open in IMG/M
3300008107|Ga0114340_1159736Not Available818Open in IMG/M
3300008996|Ga0102831_1271250Not Available560Open in IMG/M
3300009058|Ga0102854_1098605Not Available836Open in IMG/M
3300009159|Ga0114978_10197910Not Available1271Open in IMG/M
3300009172|Ga0114995_10017539All Organisms → Viruses → Predicted Viral4328Open in IMG/M
3300009172|Ga0114995_10024282All Organisms → Viruses → environmental samples → uncultured Mediterranean phage3597Open in IMG/M
3300009193|Ga0115551_1092301Not Available1426Open in IMG/M
3300009425|Ga0114997_10535137Not Available622Open in IMG/M
3300009472|Ga0115554_1019837All Organisms → Viruses → Predicted Viral3518Open in IMG/M
3300009497|Ga0115569_10443416Not Available556Open in IMG/M
3300009498|Ga0115568_10108388Not Available1367Open in IMG/M
3300009505|Ga0115564_10179084Not Available1118Open in IMG/M
3300009526|Ga0115004_10452805Not Available759Open in IMG/M
3300009705|Ga0115000_10020180All Organisms → Viruses → Predicted Viral4782Open in IMG/M
3300012920|Ga0160423_10094976All Organisms → Viruses → Predicted Viral2112Open in IMG/M
3300012954|Ga0163111_12477990Not Available528Open in IMG/M
(restricted) 3300014720|Ga0172376_10221390Not Available1184Open in IMG/M
3300017726|Ga0181381_1042377Not Available1008Open in IMG/M
3300017735|Ga0181431_1014000All Organisms → Viruses → Predicted Viral1895Open in IMG/M
3300017744|Ga0181397_1024941Not Available1738Open in IMG/M
3300017764|Ga0181385_1203121Not Available598Open in IMG/M
3300017951|Ga0181577_10038334Not Available3449Open in IMG/M
3300017956|Ga0181580_10130766Not Available1813Open in IMG/M
3300017956|Ga0181580_10165482All Organisms → Viruses → Predicted Viral1574Open in IMG/M
3300017957|Ga0181571_10006147All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon9001Open in IMG/M
3300017969|Ga0181585_10230594Not Available1314Open in IMG/M
3300017985|Ga0181576_10032446All Organisms → Viruses → Predicted Viral3592Open in IMG/M
3300017986|Ga0181569_10011237All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon6637Open in IMG/M
3300017986|Ga0181569_10037803All Organisms → Viruses → Predicted Viral3471Open in IMG/M
3300017986|Ga0181569_10739123Not Available649Open in IMG/M
3300018049|Ga0181572_10220070Not Available1226Open in IMG/M
3300018415|Ga0181559_10664069Not Available560Open in IMG/M
3300018420|Ga0181563_10264910Not Available1018Open in IMG/M
3300018426|Ga0181566_10062980All Organisms → Viruses → Predicted Viral2854Open in IMG/M
3300018426|Ga0181566_10778467Not Available654Open in IMG/M
3300018428|Ga0181568_10033352All Organisms → Viruses → Predicted Viral4373Open in IMG/M
3300020056|Ga0181574_10530020Not Available654Open in IMG/M
3300020161|Ga0211726_10571869Not Available950Open in IMG/M
3300020165|Ga0206125_10010059All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → unclassified Flavobacteriales → Flavobacteriales bacterium6802Open in IMG/M
3300020175|Ga0206124_10006556Not Available7363Open in IMG/M
3300020175|Ga0206124_10135266Not Available1000Open in IMG/M
3300020414|Ga0211523_10104899All Organisms → Viruses → Predicted Viral1192Open in IMG/M
3300020430|Ga0211622_10077926All Organisms → Viruses → Predicted Viral1442Open in IMG/M
3300021959|Ga0222716_10190265Not Available1308Open in IMG/M
3300021960|Ga0222715_10028342All Organisms → Viruses → Predicted Viral4063Open in IMG/M
3300021961|Ga0222714_10159556Not Available1343Open in IMG/M
3300021962|Ga0222713_10195541Not Available1358Open in IMG/M
3300022939|Ga0255754_10068637All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2001Open in IMG/M
(restricted) 3300023109|Ga0233432_10506751Not Available504Open in IMG/M
3300023176|Ga0255772_10233433Not Available1018Open in IMG/M
3300023178|Ga0255759_10250604Not Available1139Open in IMG/M
3300024236|Ga0228655_1087122Not Available675Open in IMG/M
3300024242|Ga0228673_1033975Not Available903Open in IMG/M
3300024326|Ga0228652_1034787All Organisms → Viruses → Predicted Viral1378Open in IMG/M
3300024346|Ga0244775_10083395All Organisms → Viruses → Predicted Viral2729Open in IMG/M
3300024348|Ga0244776_10343750Not Available1006Open in IMG/M
3300024505|Ga0255150_1058438Not Available609Open in IMG/M
3300025601|Ga0208768_1075121Not Available979Open in IMG/M
3300025636|Ga0209136_1004321Not Available7658Open in IMG/M
3300025699|Ga0209715_1112132Not Available984Open in IMG/M
3300025712|Ga0209305_1102706Not Available912Open in IMG/M
3300025712|Ga0209305_1118200Not Available832Open in IMG/M
3300025767|Ga0209137_1180932Not Available731Open in IMG/M
3300025879|Ga0209555_10226622Not Available742Open in IMG/M
3300025890|Ga0209631_10039610All Organisms → Viruses → Predicted Viral3248Open in IMG/M
3300025894|Ga0209335_10078319All Organisms → Viruses → Predicted Viral1822Open in IMG/M
3300026097|Ga0209953_1009601All Organisms → Viruses → Predicted Viral2024Open in IMG/M
3300026426|Ga0247570_1039625All Organisms → Viruses → Predicted Viral1012Open in IMG/M
3300027193|Ga0208800_1020849Not Available866Open in IMG/M
3300027278|Ga0208439_1000744All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon9958Open in IMG/M
3300027631|Ga0208133_1081216Not Available763Open in IMG/M
3300027804|Ga0209358_10318265Not Available758Open in IMG/M
3300028115|Ga0233450_10266100Not Available751Open in IMG/M
3300028196|Ga0257114_1066404All Organisms → Viruses → Predicted Viral1547Open in IMG/M
3300028196|Ga0257114_1139531Not Available945Open in IMG/M
3300028198|Ga0257121_1081772Not Available1219Open in IMG/M
3300031608|Ga0307999_1013245All Organisms → Viruses → environmental samples → uncultured Mediterranean phage2095Open in IMG/M
3300031630|Ga0308004_10186199Not Available851Open in IMG/M
3300031695|Ga0308016_10110862Not Available1107Open in IMG/M
3300034022|Ga0335005_0399374Not Available789Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh27.83%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine6.96%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.96%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.09%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine5.22%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.22%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater5.22%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater4.35%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous3.48%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine2.61%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.61%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine2.61%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.61%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.74%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.74%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.74%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.74%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.87%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton0.87%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.87%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.87%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.87%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.87%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.87%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.87%
Saline LakeEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake0.87%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.87%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000168Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 10mEnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300009058Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02EnvironmentalOpen in IMG/M
3300009080Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759EnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009472Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009705Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017744Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017957Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017969Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018049Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018428Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020056Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022921Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaGEnvironmentalOpen in IMG/M
3300022927Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaGEnvironmentalOpen in IMG/M
3300022937Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaGEnvironmentalOpen in IMG/M
3300022939Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaGEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023172Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaGEnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300023178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaGEnvironmentalOpen in IMG/M
3300024236Seawater microbial communities from Monterey Bay, California, United States - 67DEnvironmentalOpen in IMG/M
3300024242Seawater microbial communities from Monterey Bay, California, United States - 91DEnvironmentalOpen in IMG/M
3300024289Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8hEnvironmentalOpen in IMG/M
3300024291Seawater microbial communities from Monterey Bay, California, United States - 74DEnvironmentalOpen in IMG/M
3300024326Seawater microbial communities from Monterey Bay, California, United States - 64DEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024505Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8hEnvironmentalOpen in IMG/M
3300025601Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1 (SPAdes)EnvironmentalOpen in IMG/M
3300025636Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025699Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025767Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025879Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300025894Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026426Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 23R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027193Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)EnvironmentalOpen in IMG/M
3300027278Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)EnvironmentalOpen in IMG/M
3300027631Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027804Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300028115Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)EnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300028198Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_100EnvironmentalOpen in IMG/M
3300031142Marine microbial communities from water near the shore, Antarctic Ocean - #353EnvironmentalOpen in IMG/M
3300031608Marine microbial communities from water near the shore, Antarctic Ocean - #1EnvironmentalOpen in IMG/M
3300031629Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80EnvironmentalOpen in IMG/M
3300031630Marine microbial communities from water near the shore, Antarctic Ocean - #38EnvironmentalOpen in IMG/M
3300031647Marine microbial communities from water near the shore, Antarctic Ocean - #179EnvironmentalOpen in IMG/M
3300031687Marine microbial communities from water near the shore, Antarctic Ocean - #125EnvironmentalOpen in IMG/M
3300031695Marine microbial communities from water near the shore, Antarctic Ocean - #233EnvironmentalOpen in IMG/M
3300034022Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOWin2010_1008860513300000117MarineGLTNANSFIYADANKMLTAIVPTQAGDVIQWNGSAFVASNALDGGTF*
LPjun09P1210mDRAFT_100734523300000168MarineNVTISGTAELRVNSATANSFVYYDANKSIESVAASTAGDVIQWNGSSFVASNELDGGTF*
OpTDRAFT_10023369103300000928Freshwater And MarineLTANSFIYANASKQLTAVTPSNAGDVIQWNGSSFVASNDLDGGTF*
BBAY94_1010782413300000949Macroalgal SurfaceFVFYDSNKSLESVAASTDGDVIQWNGSSFVASNEIDGGTF*
Ga0075446_1005718323300006190MarineDDGTDATFSGDLTVTGLAAGSNGAFLFADANEKLQSVNAATAGDVIQWNGSSFVASNAIDGGTF*
Ga0075476_1024239113300006867AqueousFIYVDTNDKLQSVNASQAGDVIQWDGSSFVASNEIDGGAF*
Ga0075481_1028867613300006868AqueousAFIYVDTNDKLQSVNASQAGDVIQWDGSSFVASNEIDGGAF*
Ga0075479_1038951913300006870AqueousNSFVYYDSNKSIESVAASTAGDVIQWNGSSFVASNEIDGGTF*
Ga0098045_103506123300006922MarineNSATANSFVYYDSNKSLESVTPSTAGDVIQWNGSSFVASNEIDGGTF*
Ga0098046_102814313300006990MarineSAGSDGAFLYVDSSDKVQKVDVSTAGDVIQWDGSSFVASNALDGGTF*
Ga0099849_128591813300007539AqueousTIGGTAELRINAASTNSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGTF*
Ga0114340_115973613300008107Freshwater, PlanktonNSFLVADSSKELTSVVPSNDGDLIQWNGSSFVASNTIDGGTF*
Ga0102831_127125023300008996EstuarineTGLTANSFVVSNGSKKLISVTPSNAGDLIQWNGSSFIASNELDGGTF*
Ga0102854_109860513300009058EstuarineLRINAATANSFVYFDSNKSIESVAAATAGDVIQWNGSSFVASNELDGGTF*
Ga0102815_1002575833300009080EstuarineDLTVTGLTAGANGAFLYADANEKLQAVNAGTAGDVIQWDGSSFVASNELDGGTF*
Ga0114978_1019791023300009159Freshwater LakeIGTDLVITGLTANSFVVSNGSKKLISVTPSNAGDLIQWNGSSFVASNELDGGTF*
Ga0114995_1001753913300009172MarineNGAFLYADANEKLQAVNAATAGDVIQWNGSSFVASNEIDGGTF*
Ga0114995_1002428243300009172MarineGANGAFLYADANEKLQAVNAATAGDVIQWNGSSFVASNAIDGGTF*
Ga0115551_109230113300009193Pelagic MarineGTDVTISGTAELRINAATANSFVYFDSNKSLESVTPSTAGDVIQWNGSSFVASNEIDGGTF*
Ga0114997_1053513713300009425MarineLYTDANEKLQAVDASTAGDVIQWNGSSFVASNSIDGGTF*
Ga0115554_101983713300009472Pelagic MarineVYFDSNKSLESVSAATAGDVIQWNGSSFVASNEIDGGTF*
Ga0115569_1044341623300009497Pelagic MarineGTAELRINAATANSFVYFDSNKSLESVAAATAGDVIQWNGSSFVASNEIDGGTF*
Ga0115568_1010838813300009498Pelagic MarineDVTIGGTAELRINAATANSFVYFDSNKSLESVTAATVGDVIQWNGSSFVASNEIDGGTF*
Ga0115564_1017908423300009505Pelagic MarineANSFAFFNGDKSLESVAASTAGDVIQYNGSSFVASNEIDGGTF*
Ga0115004_1045280513300009526MarineGANGAFLYADANEKLQAVNAASAGDVIQWNGSSFVASNAIDGGTF*
Ga0115000_1002018013300009705MarineTAGANGAFLYADANEKLQAVNAATAGDVIQWNGSSFVASNEIDGGTF*
Ga0160423_1009497613300012920Surface SeawaterVNGATANGFAFVNADKSIESVAASTDGDLIQWNGSSFVASNEVDGGTF*
Ga0163111_1247799013300012954Surface SeawaterVTIGGTAELRLNSATANSFAFFNGDKSLESVAGGTAGNLIQYNGSSFVSSNEIDGGTF*
(restricted) Ga0172376_1022139013300014720FreshwaterIITGTAELRINGATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNTIDGGTF*
Ga0181390_109941723300017719SeawaterTGDLTIAGLSAGSDGAFLYVDSSDKVQKVDVSTAGDVIQWDGSSFVASNALDGGTF
Ga0181381_102884613300017726SeawaterFSGDLIVTGLSAGANGAFLYADADEKLQAVNASTAGDVIQWNGSSFVASNEIDGGTF
Ga0181381_104237723300017726SeawaterINAGTANSFVYFDTNKSLEAVTPSNAGDVIQWNGSSFVASREIDGGTF
Ga0181431_101400013300017735SeawaterRSELRVNSATANSFVYYDSNKSLESVAAATDGDVIQWNGSSFVASNILDGGTF
Ga0181397_102494123300017744SeawaterLRINAATANSFVYFDSNKSLESVSAATAGDVIQWNGSSFVASNEIDGGTF
Ga0181385_120312123300017764SeawaterNVTVSGTAELRINAATANSFVYFDSNKSLESVAAATAGDVIQWNGSSFVASNELDGGTF
Ga0181565_1037837323300017818Salt MarshIVSGLSVGSNGGFVYVDTSNTLQSATATNDGDVIQWNGTSFVASNELDGGGF
Ga0181607_1035690523300017950Salt MarshGDVIIDGLTVGSNGGFLYVDTDNKVQSVTATNAGDVIQWDGSSFVASNALDGGTF
Ga0181607_1062561623300017950Salt MarshGDVIIDGLTVGSNGGFLYVDTDNKVQSVTATNAGDVIQWDGTSFVAANALDGGTF
Ga0181577_1003833423300017951Salt MarshDSNKSLEAVTPSNAGDVIQWNGSSFVASNELDGGTF
Ga0181580_1013076623300017956Salt MarshVYFDSNKSLESVAASTDGDVIQWNGSSFVASNEIDGGTF
Ga0181580_1016548213300017956Salt MarshNAATANSFVYFDSNKSLESVAPSTDGDVIQWNGSSFVASNEIDGGSF
Ga0181571_1000614773300017957Salt MarshVTISGTAELRINAATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGTF
Ga0181590_1104050723300017967Salt MarshGDVIIDGLTVGSNGGFLYVDTDNKVQSVTATNAGDVIQWDGSSFVAANALDGGTF
Ga0181585_1023059413300017969Salt MarshNAFAFFNGDKSLESVAASTAGDVIQYNGSSFVASNEIDGGTF
Ga0181576_1003244613300017985Salt MarshINAATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNELDGGTF
Ga0181569_1001123733300017986Salt MarshNSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGTF
Ga0181569_1003780313300017986Salt MarshTAELRINAATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGTF
Ga0181569_1039020813300017986Salt MarshIDGLTVGSNGAFLYVDTSNTIQSVTATNAGDVIQWDGSSFVASNGLDGGTF
Ga0181569_1073912323300017986Salt MarshSFVYFDSNKSLESVAAATAGDVIQWNGSSFVASNEIDGGSF
Ga0181572_1022007023300018049Salt MarshATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNELDGGTF
Ga0181559_1066406913300018415Salt MarshNSFVYFDSNKSLESVAPSTDGDVIQWNGSSFVASNEIDGGSF
Ga0181553_1040002223300018416Salt MarshATFSGDVIVDGLSAGVNGAFLYADSNNTLQAVNAATAGDVIQWDGTSFVASNALDGGTF
Ga0181563_1026491013300018420Salt MarshTAELRINAATANSFVYFDSNKSLESVAPSTDGDVIQWNGSSFVASNEIDGGSF
Ga0181566_1006298013300018426Salt MarshLRINAATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGTF
Ga0181566_1077846723300018426Salt MarshFFNGDKSLESVAASTAGDVIQYNGSSFVASNEIDGGTF
Ga0181568_1003335213300018428Salt MarshISGTAELRINAATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGTF
Ga0181574_1053002023300020056Salt MarshANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNELDGGTF
Ga0211726_1057186923300020161FreshwaterITGLTANSFVVSNGSKKLISVTPSNAGDLIQWNGSSFVASNELDGGTF
Ga0206125_1001005913300020165SeawaterFVYFDSNKSLESVTAATAGDVIQWNGSSFVASNEIDGGTF
Ga0206124_1000655643300020175SeawaterINAATANSFVYFDSNKSLESVAAATAGDVIQWNGSSFVASNEIDGGTF
Ga0206124_1013526623300020175SeawaterINAATANSFVYFDSNKSLESVAAATAGDVIQWNGSSFVASNELDGGTF
Ga0211523_1010489913300020414MarineFNGDKSLESVAGGSAGNLIQYNGSSFVSSNEIDGGTF
Ga0211622_1007792613300020430MarineNGATANGFAFVNADKSIESVAASTDGDLIQWNGSSFVASNEVDGGTF
Ga0222716_1019026513300021959Estuarine WaterRINAGTANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGTF
Ga0222716_1044642613300021959Estuarine WaterLYADASKTLTAIAPTQAGDLIQWDGSSFVASNALDGGTF
Ga0222715_1002834223300021960Estuarine WaterSFVYFDSNKSIESVAASTAGDVIQWNGSSFVASNEIDGGTF
Ga0222714_1015955613300021961Estuarine WaterVNGAFIYVDSNDKLVSVDASTAGDVIQWNGSSFVASNELDGGTF
Ga0222713_1019554123300021962Estuarine WaterTDLIISGLTANSFLVANGTKELTSVAPSNDGDLIQWNGSSFVASNTIDGGTF
Ga0222719_1017300033300021964Estuarine WaterGGFLYVDTDNKVQSVTATNAGDVIQWDGSSFVASNALDGGTF
Ga0255765_119783813300022921Salt MarshTVGSNGAFLYVDTSNKIQTVTATNAGDVIQWDGSSFVAANALDGGTF
Ga0255769_1037091413300022927Salt MarshIIDGLTVGSNGGFLYVDTDNKVQSVTATNAGDVIQWDGSSFVASNALDGGTF
Ga0255770_1040571613300022937Salt MarshGDVIIDGLTVGSNGGFLYVDTDNKVQSVTATNAGDVIQWDGSSFVASNGLDGGTF
Ga0255754_1006863713300022939Salt MarshGTNVTISGTAELRINAATANSFVYFDSNKSLEAVTPSNAGDVIQWNGSSFVASNEIDGGT
Ga0255778_1008879213300023084Salt MarshYVDTDNKVQSVTATNAGDVIQWDGSSFVASNGLDGGTF
(restricted) Ga0233432_1050675123300023109SeawaterAFLYVDSSDKVQKVDVSTAGDVIQWDGSSFVASNALDGGTF
Ga0255766_1038238623300023172Salt MarshVIIDGLTVGSNGGFLYVDTDNKVQSVTATNAGDVIQWDGTSFVAANALDGGTF
Ga0255772_1023343323300023176Salt MarshTAELRLNSATANAFAFFNGDKSLESVAASTAGDVIQYNGSSFVASNEIDGGTF
Ga0255759_1025060413300023178Salt MarshTAELRINAATANSFVYFDSNKSLEAVTPANTGDVIQWNGSSFVASNEIDGGTF
Ga0228655_108712213300024236SeawaterTANSFVYFDSNKSLESVSAATAGDVIQWNGSSFVASNEIDGGTF
Ga0228673_103397523300024242SeawaterTNVTVSGTAELRINAATANSFVYFDSNKSLESVSAATAGDVIQWNGSSFVASNEIDGGTF
Ga0255147_106294223300024289FreshwaterSSKTITSVVPTNAADMIQWNGSSFVASNTIDGGTF
Ga0228660_104633623300024291SeawaterVTGLSAGANGAFLYADADEKLQAVNASTAGDVIQWNGSSFVASNELDGGTF
Ga0228652_103478713300024326SeawaterDVTIGGTAELRINAATANSFVYFDSNKSIESVAASTAGDVIQWNGSSFVASNEIDGGTF
Ga0244775_1008339513300024346EstuarineSATANSFVYYDANKSIESVAAATAGDVIQWNGSSFVASNELDGGTF
Ga0244776_1034375013300024348EstuarineLRVNSATANSFVYYDANKSIESVAAATAGDVIQWNGSSFVASNELDGGTF
Ga0255150_105843813300024505FreshwaterLTGNSFLYADSSKTITSVVPTNAGDMIQWNGSSFVASNTIDGGTF
Ga0208768_107512113300025601Saline LakeGDVIVDGLSTSSFLFADANKQLTSIVPSNAGDVIQWNGASFVASNELDGGTF
Ga0209136_100432113300025636MarineGLTASSFLYADANKQLTAITPSNAGDVIQWNGSSFVASNELDGGTF
Ga0209715_111213213300025699Pelagic MarineLRINAATANSFVYFDSNKSLESVTAATAGDVIQWNGSSFVASNEIDGGTF
Ga0209305_110270613300025712Pelagic MarineYFDSNKSLESVAAATAGDVIQWNGSSFVASNEIDGGTF
Ga0209305_111820013300025712Pelagic MarineGTDVTISGTAELRINAATANSFVYFDSNKSLESVTAATAGDVIQWNGSSFVASNEIDGGT
Ga0209137_118093213300025767MarineASSFLYADANKQLTAITPSNAGDVIQWNGSSFVASNELDGGTF
Ga0209555_1022662213300025879MarineYADANKQLTAITPSNAGDVIQWNGSSFVASNELDGGTF
Ga0209631_1003961013300025890Pelagic MarineGGTAELRINAATANSFVYFDSNKSLESVTAATAGDVIQWNGSSFVASNEIDGGTF
Ga0209335_1007831913300025894Pelagic MarineTISGTAELRINAATANSFVYFDSNKSLESVTAATAGDVIQWNGSSFVASNEIDGGTF
Ga0209953_100960123300026097Pond WaterELRVNGATANSFVYFDGNKSLEAVTPSNAGDVIQWNGSSFIASNELDGGTF
Ga0247570_103962523300026426SeawaterLRINAATANSFVYFDSNKSLESVAAATAGDVIQWNGSSFVASNELDGGTF
Ga0208800_102084913300027193EstuarineTGLTANSFVVSNGSKKLISVTPSNAGDLIQWNGSSFIASNELDGGTF
Ga0208439_100074453300027278EstuarineDGDKTLTAVAPSNAGDLIQWNGSSFVASNEIDGGTF
Ga0208133_108121613300027631EstuarineDLTINGLTANSFLYADSTKTLTSVTPSNAGDMIQWNGSSFVASNTIDGGTF
Ga0209711_1033927013300027788MarineGTDVSITGDLTVTGLAAGANGAFLYADANEKLQAVNAASAGDVIQWNGSSFVASNAIDGGTF
Ga0209358_1031826513300027804Freshwater LakeVSNGSKKLISVAPSNAGDLIQWNGSSFVASNEIDGGTF
Ga0233450_1026610013300028115Salt MarshNSATANAFAFFNGDKSLESVAASTAGDVIQYNGSSFVASNEIDGGTF
Ga0233450_1034442213300028115Salt MarshDGLSAGVNGAFLYADSNNTLQAVNAATAGDVIQWDGTSFVASNALDGGTF
Ga0257114_106640413300028196MarineSATANSFVYYDANKSLESVAAATAGDVIQWNGSSFVASREIDGGTF
Ga0257114_113953113300028196MarineSAGTNGAFLFADADEKLQSVNASTAGDVIQWNGSSFVASNEIDGGTF
Ga0257121_108177223300028198MarineISGTAELRINAATANSFVYFDSNKSIESVAASTAGDVIQWNGSSFVASNEIDGGTF
Ga0308022_110134223300031142MarineATFSGDITVSGLSAGSNGAFLYADANEKLQAVDASTTGDIIQWNGSSFVASNSIDGGTF
Ga0307999_101324513300031608MarineGLAAGSNGAFLFADANEKLQSVNAATAGDVIQWNGSSFVASNAIDGGTF
Ga0307985_1003259023300031629MarineTFSGDITVTGLSAGANGAFLYSDANEKLQAVDASTAGDIIQWNGSSFVASNSIDGGTF
Ga0308004_1018619923300031630MarineGANGAFLYSDANEKLQAVDASTAGDIIQWNGSSFVASNSIDGGTF
Ga0308012_1018871613300031647MarineSITGDLTVTGLAAGSNGAFLYADASEKLHAVDAATAGDVIQWNGSSFVASNSIDGGTF
Ga0308008_102472233300031687MarineSGDLTVTGLAAGSNGAFLFADANEKLQSVNAATAGDVIQWNGSSFVASNAIDGGTF
Ga0308016_1011086213300031695MarineGTAELRINAATANSFVYFDANKSIESVAASNAGDVIQWNGSSFVASNSIDGGTF
Ga0335005_0399374_2_1393300034022FreshwaterLTANSFVVSNGSKKLISVTPSNAGDLIQWNGSSFIASNELDGGTF


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