Metagenome / Metatranscriptome Family F080233

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080233
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	38 residues
Representative Sequence	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS
Number of Associated Samples	89
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.09 %
% of genes near scaffold ends (potentially truncated)	63.48 %
% of genes from short scaffolds (< 2000 bps)	66.09 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.609 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (33.913 % of family members)
Environment Ontology (ENVO)	Unclassified (79.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.03% β-sheet: 0.00% Coil/Unstructured: 46.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00471	Ribosomal_L33	38.26
PF00574	CLP_protease	33.04
PF01970	TctA	2.61
PF13640	2OG-FeII_Oxy_3	2.61
PF08003	Methyltransf_9	2.61
PF13186	SPASM	1.74
PF00501	AMP-binding	1.74
PF02826	2-Hacid_dh_C	1.74
PF06945	DUF1289	1.74
PF02585	PIG-L	0.87
PF05050	Methyltransf_21	0.87
PF13489	Methyltransf_23	0.87
PF04055	Radical_SAM	0.87
PF03567	Sulfotransfer_2	0.87
PF03480	DctP	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	66.09
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	66.09
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	38.26
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	33.04
COG1784	TctA family transporter	General function prediction only [R]	2.61
COG3333	TctA family transporter	General function prediction only [R]	2.61
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	1.74
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
All Organisms	root	All Organisms	37.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Viruses	superkingdom	All Organisms → Viruses	24.35 %
cellular organisms	root	All Organisms → cellular organisms	13.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.17 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.09 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.87 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.48 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.74 %
bacterium TMED46	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	0.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.74 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	1.74 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.87 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.87 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.87 %
bacterium TMED46	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	1.74 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.74 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.87 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.87 %
bacterium TMED46	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.74 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.87 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.87 %
bacterium TMED46	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.74 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.87 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.87 %
bacterium TMED46	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	22.61 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.74 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.74 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.87 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.87 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.87 %
bacterium TMED46	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000117\|DelMOWin2010_c10050767	Not Available	1832	Open in IMG/M
3300000117\|DelMOWin2010_c10112425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	970	Open in IMG/M
3300001460\|JGI24003J15210_10020732	Not Available	2505	Open in IMG/M
3300001472\|JGI24004J15324_10004675	Not Available	5291	Open in IMG/M
3300001938\|GOS2221_1019015	Not Available	1615	Open in IMG/M
3300005433\|Ga0066830_10060172	Not Available	784	Open in IMG/M
3300005523\|Ga0066865_10062879	All Organisms → Viruses → Predicted Viral	1305	Open in IMG/M
3300005606\|Ga0066835_10271672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	583	Open in IMG/M
3300005838\|Ga0008649_10024434	All Organisms → cellular organisms → Bacteria → Proteobacteria	2933	Open in IMG/M
3300006193\|Ga0075445_10007956	Not Available	4845	Open in IMG/M
3300006400\|Ga0075503_1573231	Not Available	633	Open in IMG/M
3300006737\|Ga0098037_1237734	Not Available	587	Open in IMG/M
3300006752\|Ga0098048_1027961	All Organisms → Viruses → Predicted Viral	1849	Open in IMG/M
3300006867\|Ga0075476_10236359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300006867\|Ga0075476_10355201	Not Available	506	Open in IMG/M
3300006916\|Ga0070750_10288625	Not Available	704	Open in IMG/M
3300006921\|Ga0098060_1075529	Not Available	970	Open in IMG/M
3300006922\|Ga0098045_1000423	Not Available	16791	Open in IMG/M
3300006928\|Ga0098041_1212485	Not Available	619	Open in IMG/M
3300008050\|Ga0098052_1254215	Not Available	671	Open in IMG/M
3300009193\|Ga0115551_1177879	Not Available	965	Open in IMG/M
3300010296\|Ga0129348_1220550	Not Available	642	Open in IMG/M
3300012928\|Ga0163110_10106762	All Organisms → Viruses → Predicted Viral	1879	Open in IMG/M
3300012936\|Ga0163109_10004080	Not Available	11135	Open in IMG/M
3300012953\|Ga0163179_10034873	All Organisms → Viruses → Predicted Viral	3403	Open in IMG/M
3300012953\|Ga0163179_11090866	Not Available	701	Open in IMG/M
3300017708\|Ga0181369_1003300	Not Available	4438	Open in IMG/M
3300017709\|Ga0181387_1003859	Not Available	2992	Open in IMG/M
3300017709\|Ga0181387_1018900	All Organisms → Viruses → Predicted Viral	1337	Open in IMG/M
3300017709\|Ga0181387_1058364	Not Available	772	Open in IMG/M
3300017713\|Ga0181391_1105515	Not Available	636	Open in IMG/M
3300017719\|Ga0181390_1010996	Not Available	3174	Open in IMG/M
3300017719\|Ga0181390_1018111	All Organisms → Viruses → Predicted Viral	2338	Open in IMG/M
3300017719\|Ga0181390_1048900	All Organisms → Viruses → Predicted Viral	1248	Open in IMG/M
3300017721\|Ga0181373_1001039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5560	Open in IMG/M
3300017724\|Ga0181388_1023683	All Organisms → Viruses → Predicted Viral	1529	Open in IMG/M
3300017725\|Ga0181398_1007982	All Organisms → Viruses → Predicted Viral	2731	Open in IMG/M
3300017725\|Ga0181398_1033878	All Organisms → Viruses → Predicted Viral	1253	Open in IMG/M
3300017738\|Ga0181428_1006478	Not Available	2666	Open in IMG/M
3300017738\|Ga0181428_1084171	Not Available	742	Open in IMG/M
3300017739\|Ga0181433_1077743	Not Available	820	Open in IMG/M
3300017741\|Ga0181421_1027997	All Organisms → Viruses → Predicted Viral	1525	Open in IMG/M
3300017742\|Ga0181399_1036048	Not Available	1326	Open in IMG/M
3300017749\|Ga0181392_1016545	All Organisms → Viruses → Predicted Viral	2368	Open in IMG/M
3300017750\|Ga0181405_1115483	Not Available	672	Open in IMG/M
3300017752\|Ga0181400_1165432	Not Available	622	Open in IMG/M
3300017753\|Ga0181407_1007023	Not Available	3279	Open in IMG/M
3300017753\|Ga0181407_1060711	Not Available	979	Open in IMG/M
3300017753\|Ga0181407_1126954	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	635	Open in IMG/M
3300017755\|Ga0181411_1139140	Not Available	702	Open in IMG/M
3300017757\|Ga0181420_1059959	Not Available	1209	Open in IMG/M
3300017758\|Ga0181409_1040054	All Organisms → Viruses → Predicted Viral	1462	Open in IMG/M
3300017758\|Ga0181409_1046324	Not Available	1346	Open in IMG/M
3300017758\|Ga0181409_1154762	Not Available	669	Open in IMG/M
3300017759\|Ga0181414_1011882	All Organisms → Viruses → Predicted Viral	2387	Open in IMG/M
3300017759\|Ga0181414_1052861	Not Available	1086	Open in IMG/M
3300017763\|Ga0181410_1047431	Not Available	1327	Open in IMG/M
3300017763\|Ga0181410_1127691	Not Available	724	Open in IMG/M
3300017764\|Ga0181385_1002491	Not Available	6414	Open in IMG/M
3300017764\|Ga0181385_1005117	Not Available	4417	Open in IMG/M
3300017765\|Ga0181413_1251381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	521	Open in IMG/M
3300017767\|Ga0181406_1110659	Not Available	830	Open in IMG/M
3300017773\|Ga0181386_1042773	All Organisms → Viruses → Predicted Viral	1470	Open in IMG/M
3300017773\|Ga0181386_1247049	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300017782\|Ga0181380_1052070	All Organisms → Viruses → Predicted Viral	1464	Open in IMG/M
3300017783\|Ga0181379_1004881	All Organisms → cellular organisms → Bacteria	5859	Open in IMG/M
3300017956\|Ga0181580_10072323	Not Available	2565	Open in IMG/M
3300017956\|Ga0181580_10244261	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300018410\|Ga0181561_10044145	All Organisms → Viruses → Predicted Viral	2837	Open in IMG/M
3300018416\|Ga0181553_10096661	All Organisms → Viruses → Predicted Viral	1832	Open in IMG/M
3300018416\|Ga0181553_10606431	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	578	Open in IMG/M
3300018417\|Ga0181558_10648482	Not Available	540	Open in IMG/M
3300018428\|Ga0181568_11267712	Not Available	551	Open in IMG/M
3300019751\|Ga0194029_1048570	Not Available	697	Open in IMG/M
3300020052\|Ga0181554_1069285	Not Available	1800	Open in IMG/M
3300020165\|Ga0206125_10068388	All Organisms → Viruses → Predicted Viral	1621	Open in IMG/M
3300020168\|Ga0181588_10343615	Not Available	592	Open in IMG/M
3300020178\|Ga0181599_1057136	Not Available	1916	Open in IMG/M
3300020185\|Ga0206131_10412965	Not Available	559	Open in IMG/M
3300020280\|Ga0211591_1103670	Not Available	592	Open in IMG/M
3300020294\|Ga0211520_1055846	Not Available	627	Open in IMG/M
3300020336\|Ga0211510_1079803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	768	Open in IMG/M
3300020381\|Ga0211476_10294023	Not Available	553	Open in IMG/M
3300020404\|Ga0211659_10469732	Not Available	540	Open in IMG/M
3300020437\|Ga0211539_10438378	Not Available	544	Open in IMG/M
3300020445\|Ga0211564_10278214	Not Available	826	Open in IMG/M
3300020450\|Ga0211641_10005277	Not Available	7903	Open in IMG/M
3300020475\|Ga0211541_10181097	All Organisms → Viruses → Predicted Viral	1036	Open in IMG/M
3300021356\|Ga0213858_10059076	All Organisms → Viruses → Predicted Viral	1862	Open in IMG/M
3300021958\|Ga0222718_10006707	Not Available	9117	Open in IMG/M
3300021958\|Ga0222718_10603576	Not Available	514	Open in IMG/M
3300021959\|Ga0222716_10090597	All Organisms → Viruses → Predicted Viral	2083	Open in IMG/M
3300021960\|Ga0222715_10078982	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300022068\|Ga0212021_1066541	Not Available	738	Open in IMG/M
3300022074\|Ga0224906_1018651	Not Available	2520	Open in IMG/M
3300022922\|Ga0255779_1270598	Not Available	671	Open in IMG/M
3300022925\|Ga0255773_10015200	All Organisms → cellular organisms → Bacteria	5459	Open in IMG/M
(restricted) 3300022933\|Ga0233427_10021272	Not Available	3987	Open in IMG/M
3300025086\|Ga0208157_1038364	Not Available	1342	Open in IMG/M
3300025120\|Ga0209535_1006465	Not Available	7045	Open in IMG/M
3300025120\|Ga0209535_1008061	Not Available	6171	Open in IMG/M
3300025120\|Ga0209535_1010832	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	5138	Open in IMG/M
3300025127\|Ga0209348_1036262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1738	Open in IMG/M
3300025132\|Ga0209232_1011328	All Organisms → Viruses → Predicted Viral	3666	Open in IMG/M
3300025137\|Ga0209336_10011203	All Organisms → cellular organisms → Bacteria	3529	Open in IMG/M
3300025137\|Ga0209336_10155889	Not Available	600	Open in IMG/M
3300025137\|Ga0209336_10160785	Not Available	586	Open in IMG/M
3300025276\|Ga0208814_1008445	Not Available	3812	Open in IMG/M
3300025680\|Ga0209306_1033915	All Organisms → Viruses → Predicted Viral	1721	Open in IMG/M
3300026136\|Ga0208763_1000009	Not Available	61404	Open in IMG/M
3300026257\|Ga0208407_1010001	All Organisms → Viruses → Predicted Viral	3601	Open in IMG/M
3300028194\|Ga0257106_1087641	Not Available	1132	Open in IMG/M
3300031851\|Ga0315320_10043324	Not Available	3533	Open in IMG/M
3300031851\|Ga0315320_10110729	All Organisms → Viruses → Predicted Viral	2090	Open in IMG/M
3300031851\|Ga0315320_10180351	Not Available	1567	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.13%
Freshwater	Environmental → Aquatic → Freshwater	0.87%

Habitat	Taxonomy	Distribution
Strait	Environmental → Aquatic → Marine → Strait	33.91%
Oceanic	Environmental → Aquatic → Marine → Oceanic	25.22%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.04%
Coastal	Environmental → Aquatic → Marine → Coastal	6.09%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.48%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.74%
River	Environmental → Aquatic → Freshwater → River	0.87%
Inlet	Environmental → Aquatic → Marine → Inlet	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	33.91%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	23.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.04%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	10.43%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.48%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.74%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	33.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	20.00%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	10.43%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.57%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.35%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.48%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.61%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.74%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.74%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.74%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.74%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.74%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.74%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.87%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.87%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.87%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.87%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.87%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001938	Marine microbial communities from Bedford Basin, Nova Scotia, Canada - GS005	Environmental	Open in IMG/M
3300005433	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005838	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_130m_DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006400	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300020052	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011503CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020168	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020280	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX556044-ERR599114)	Environmental	Open in IMG/M
3300020294	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)	Environmental	Open in IMG/M
3300020336	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300021356	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022922	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022933 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_100_MG	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300026136	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300028194	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_100507672	3300000117	Marine	MFYIWHTLLIATFIAVAYYMGYHHGGKKAKVKETIRKS*
DelMOWin2010_101124252	3300000117	Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS*
JGI24003J15210_100207323	3300001460	Marine	MFYIWHTLIIATFIAVAYYMGYHHGVKKAKVKETIRKS*
JGI24004J15324_1000467511	3300001472	Marine	YIWHTLIIATFIAVAYYMGYHHGGKKTKVEETIRKS*
GOS2221_10190152	3300001938	Marine	MFYIWHTLIITTFMAVAYYMGYHHATKKHKAKEITRKI*
Ga0066830_100601723	3300005433	Marine	DLISKINSMFYIWHTLLIATFIAVAYHMGYQHGGQKAKIKVRPRK*
Ga0066865_100628794	3300005523	Marine	TNSMFYIWHTLIIATFIAVAFHMGYQYGKRKVKIKKTLSKS*
Ga0066835_102716722	3300005606	Marine	MFYIWHTLLIATFIAVAYHMGYQHGGQKAKIKVRPRK*
Ga0008649_100244343	3300005838	Marine	MYMFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS*
Ga0075445_100079566	3300006193	Marine	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKLIIRNSK*
Ga0075503_15732312	3300006400	Aqueous	NSTKGVRVHAHLIITSMFYIWHTLLIATFIAVAYYMGYQHGGKKAKVKETIRKS*
Ga0098037_12377343	3300006737	Marine	SMFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKKTIRKS*
Ga0098048_10279618	3300006752	Marine	WHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS*
Ga0075476_102363593	3300006867	Aqueous	FYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKG*
Ga0075476_103552011	3300006867	Aqueous	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRK
Ga0070750_102886251	3300006916	Aqueous	IWHTLLIATFIAVAYYMGYQHGGKKAKVKETIRKS*
Ga0098060_10755292	3300006921	Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKDKETIR*
Ga0098045_10004238	3300006922	Marine	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS*
Ga0098041_12124854	3300006928	Marine	NSMFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS*
Ga0098052_12542151	3300008050	Marine	MFYIWHTLIIASFIGVAYHLGYTYGKRQTKNKETIRKS
Ga0115551_11778791	3300009193	Pelagic Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIR
Ga0129348_12205502	3300010296	Freshwater To Marine Saline Gradient	MFYVWHTLIIATFIAVAYQLGYLHGRKKAQVKKTLRKG
Ga0163110_101067623	3300012928	Surface Seawater	MFYIWHTILIATFIAVAYYMGYHHGGKKVKVKETIRKS*
Ga0163109_100040805	3300012936	Surface Seawater	MFYIWHTLIIVTFIAVAYQMGYLYGKGQNKVKKTVRKS*
Ga0163179_100348734	3300012953	Seawater	MFYIWHTLLIAAFISVGYYLGWEHGKRQAKNKETIRKS*
Ga0163179_110908663	3300012953	Seawater	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIR
Ga0181369_10033008	3300017708	Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKIRLRK
Ga0181387_10038596	3300017709	Seawater	FYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0181387_10189003	3300017709	Seawater	NSMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0181387_10583643	3300017709	Seawater	MFYIWHTLIIATFIAVAYYMGYHHGGKKVKNKETIRK
Ga0181391_11055153	3300017713	Seawater	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETI
Ga0181390_101099611	3300017719	Seawater	MFYIWHTIIIATFIAVAYHMGYQYGKRQVKIKKALRKS
Ga0181390_10181111	3300017719	Seawater	IWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKG
Ga0181390_10489003	3300017719	Seawater	MFYIWHTLIIATFIAVAYYMGHQHGGKKAKVKETIRKS
Ga0181373_10010395	3300017721	Marine	MFYIWHTLIIATFIAVAYNMGHQHGRKEAKVKKTIRKS
Ga0181388_10236831	3300017724	Seawater	YRIINSMFYIWHTLIIATFIAVAYYMGYHHGGKKVKNKETIRKS
Ga0181398_10079823	3300017725	Seawater	MFYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTIRKS
Ga0181398_10338782	3300017725	Seawater	MFYIWHTLIIATFIAVAYYMGHQHGTKKVVEKKLPHSK
Ga0181428_10064781	3300017738	Seawater	IWHTLIIVTFIAMAYYMGYQHGGKKTKIKETIRKS
Ga0181428_10841713	3300017738	Seawater	INCMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0181433_10777433	3300017739	Seawater	RIINSMFYIWHTLIIATFIAVAYYMGYQHGGQKAKVKETIRKS
Ga0181421_10279971	3300017741	Seawater	RIINSMFYIWHTLIIATFIAVAYYMGYHHGGKKVKNKETIRKS
Ga0181399_10360485	3300017742	Seawater	FYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTVRKS
Ga0181392_10165451	3300017749	Seawater	ISIINSMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKG
Ga0181405_11154831	3300017750	Seawater	IIINSMFYIWHTLIIATFIAVAYYMGYQYGGQKAKVKKTVRKS
Ga0181400_11654321	3300017752	Seawater	IWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0181407_10070233	3300017753	Seawater	MFYIWHTLIIATFIAVAYHMGYQHGKRKVKIKKTLPKS
Ga0181407_10607113	3300017753	Seawater	MFYIWHTLIIATFIAVAYYMGYQHGGKKVKNKETI
Ga0181407_11269541	3300017753	Seawater	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRK
Ga0181411_11391404	3300017755	Seawater	YIWHTLIIVTFIAMAYYMGYQHGGKKTKIKETIRKS
Ga0181420_10599595	3300017757	Seawater	SMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0181409_10400541	3300017758	Seawater	IRIINSMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETVRKS
Ga0181409_10463245	3300017758	Seawater	IIINSMFYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTVRKS
Ga0181409_11547623	3300017758	Seawater	FYIWHTLIIALFIAVAYHMGYQYGGKKTKIKKTIRKS
Ga0181414_101188210	3300017759	Seawater	QISIINSMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKG
Ga0181414_10528614	3300017759	Seawater	QIRYIIINSMFYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTIRKS
Ga0181410_10474315	3300017763	Seawater	FYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTIRKS
Ga0181410_11276911	3300017763	Seawater	CMFYIWHTLIIATFIAVAYYMGYHYGRQKVKVKKTIRKS
Ga0181385_10024918	3300017764	Seawater	MFYIWHTLIIATFIAVAYYLGYQHGAKKIKVTQSTRKK
Ga0181385_10051173	3300017764	Seawater	MFYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTVRKS
Ga0181413_12513811	3300017765	Seawater	IRFRIINSLFYIWHTLIIATFIAVAYYMGYHHGGKKANVKETIRKS
Ga0181406_11106594	3300017767	Seawater	RKMFYIWHTLIIATFIAVAYYMGYHHGGKKVKVKETIRKS
Ga0181386_10427736	3300017773	Seawater	YIWHTIIIATFIAVAYYMGYHHGGKKAKVKETIRKG
Ga0181386_12470493	3300017773	Seawater	FYIWHTLIIATFIAVAYYMGYHHGGKEAKVKETIRKG
Ga0181380_10520701	3300017782	Seawater	NSMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKG
Ga0181379_10048813	3300017783	Seawater	MFYIWHTLIIATFIAVAYYLGYHHGGKEVKIKKTIRKS
Ga0181580_100723234	3300017956	Salt Marsh	MFYIWHTLLIATFIAVAYYMGYHHGGKKAQVKETIRKS
Ga0181580_102442613	3300017956	Salt Marsh	FYIWHTLIIATFVAVAFQMGYLYGKRQNKVKETIRKS
Ga0181561_100441454	3300018410	Salt Marsh	MYMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0181553_100966611	3300018416	Salt Marsh	YMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0181553_106064312	3300018416	Salt Marsh	MFYIWHTLLIATFIAVAYYMGYQHGGKKAKVKETIRKG
Ga0181558_106484822	3300018417	Salt Marsh	MFYIWHTLIIATFIAVAFQMGYQYGKRQNKVKKTISKS
Ga0181568_112677121	3300018428	Salt Marsh	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETI
Ga0194029_10485703	3300019751	Freshwater	VHAHLIITSMFYIWHTLLIATFIAVAYYMGYHYGGKKAKVKETIRKS
Ga0181554_10692855	3300020052	Salt Marsh	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS
Ga0206125_100683886	3300020165	Seawater	NNMFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS
Ga0181588_103436151	3300020168	Salt Marsh	MFYIWHTLLIATFIAVAYYMGYQHGGKKAKVKETIR
Ga0181599_10571361	3300020178	Salt Marsh	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0206131_104129651	3300020185	Seawater	FYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKG
Ga0211591_11036701	3300020280	Marine	INSMFYIWHTLLIATFIAVAYHMGYQHGGQKAKIKVRPRK
Ga0211520_10558463	3300020294	Marine	MFDIWHTLLIAAFISIGYYLGWEHGKRQAKNKETIRK
Ga0211510_10798033	3300020336	Marine	MFYIWHTIIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0211476_102940231	3300020381	Marine	MFYIWHTLIIAVFIAVAYHMGYQHGSKQVKKVNTPK
Ga0211659_104697321	3300020404	Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKIKNKETI
Ga0211539_104383781	3300020437	Marine	IWHTLIIATFIAVAYYMGYQHGGKKIKNKETIRKS
Ga0211564_102782141	3300020445	Marine	INSMFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKKTIRKS
Ga0211641_1000527713	3300020450	Marine	MFYIWHTLIIATFIAVAYHMGYQYGKRQTKVKKTISKS
Ga0211541_101810971	3300020475	Marine	INSMFYIWHTIIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0213858_100590763	3300021356	Seawater	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKG
Ga0222718_1000670713	3300021958	Estuarine Water	MIMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0222718_106035761	3300021958	Estuarine Water	IWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS
Ga0222716_100905973	3300021959	Estuarine Water	MFYIWHTLLIATFIAVAYYMGYQHGGKKAKVKETIRKS
Ga0222715_100789825	3300021960	Estuarine Water	YMFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS
Ga0212021_10665411	3300022068	Aqueous	MFYIWHTLIIATFIAVAYYMGYQHGGKETKVKETIRKS
Ga0224906_10186512	3300022074	Seawater	MFYIWHTLIIATFIAVAYYMGYHHGGKEAKVKETIRKG
Ga0255779_12705981	3300022922	Salt Marsh	FYMFYIWHTLIIATFIAVAFHMGYQYGKRQNKVKKTVSKS
Ga0255773_100152001	3300022925	Salt Marsh	YIWHTLLIATFIAVAYYMGYHHGGKKAKVKETIRKS
(restricted) Ga0233427_100212726	3300022933	Seawater	MFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKG
Ga0208157_10383645	3300025086	Marine	RTGDNSTKGVRVHAHLIITSMFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETIRKS
Ga0209535_10064654	3300025120	Marine	MFYIWHTLIIATFIAVAYHLGYQHGAKKIKVTQSTRKK
Ga0209535_10080616	3300025120	Marine	MFYIWHTLIIVTFIAMAYYMGYQHGGKKTKIKETIRKS
Ga0209535_10108324	3300025120	Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKVKNKETIRKS
Ga0209348_10362623	3300025127	Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKIKNKETIRKS
Ga0209232_10113287	3300025132	Marine	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKETVRKS
Ga0209336_100112037	3300025137	Marine	YIWHTLIIATFIAVAYYMGYHHGGKKTKVEETIRKS
Ga0209336_101558891	3300025137	Marine	MFYIWHTLIIATFIAVAYYMGYQHGGKKVKVKKTLRKS
Ga0209336_101607851	3300025137	Marine	MFYIWHTLIIATFIAVAYYMGYHHGGKKTKVEETI
Ga0208814_10084454	3300025276	Deep Ocean	MFYIWHTLIIATFIAVAYYMGYHHGGKKAKVKLIIRNSK
Ga0209306_10339159	3300025680	Pelagic Marine	RIINSMFYIWHTLIIATFIAVAYYMGYQHGGKKAKVKETIRKS
Ga0208763_100000973	3300026136	Marine	MFYIWHTLIIVTFIAVAYHMGYQYGKGQSKVKKTIRKG
Ga0208407_10100016	3300026257	Marine	MFYIWHTLIIATFIAVAYYMGYNHGGKKAKVKETIRKS
Ga0257106_10876411	3300028194	Marine	MFYIWHTLIIATFIAVAYYMGYHHGSKKSKSKKLRPHS
Ga0315320_100433243	3300031851	Seawater	MFYIWHTLIIATFIAVAYYMGYHYGGQKAKVKKTVRKS
Ga0315320_101107291	3300031851	Seawater	IRYIIINSMFYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTVRKS
Ga0315320_101803511	3300031851	Seawater	MFYIWHTLIIATFIAVAYYMGYQHGGQKAKVKKTI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters