Metagenome / Metatranscriptome Family F080227

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080227
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	131 residues
Representative Sequence	MQTRHLLTSAALALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTRDAVVADIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYALRRDTALAAAH
Number of Associated Samples	80
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.79 %
% of genes near scaffold ends (potentially truncated)	31.30 %
% of genes from short scaffolds (< 2000 bps)	61.74 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.696 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere (15.652 % of family members)
Environment Ontology (ENVO)	Unclassified (50.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (75.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.13% β-sheet: 11.32% Coil/Unstructured: 68.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13377	Peripla_BP_3	18.26
PF00291	PALP	6.09
PF00672	HAMP	5.22
PF17200	sCache_2	5.22
PF08402	TOBE_2	4.35
PF00015	MCPsignal	4.35
PF03544	TonB_C	3.48
PF00440	TetR_N	1.74
PF12681	Glyoxalase_2	1.74
PF13193	AMP-binding_C	1.74
PF00326	Peptidase_S9	0.87
PF00724	Oxidored_FMN	0.87
PF08269	dCache_2	0.87
PF07690	MFS_1	0.87
PF02897	Peptidase_S9_N	0.87
PF13560	HTH_31	0.87
PF00528	BPD_transp_1	0.87
PF05940	NnrS	0.87
PF04324	Fer2_BFD	0.87
PF00903	Glyoxalase	0.87
PF13458	Peripla_BP_6	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	8.70
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	3.48
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.87
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.87
COG1770	Protease II	Amino acid transport and metabolism [E]	0.87
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.87
COG3213	Nitric oxide response protein NnrS	Signal transduction mechanisms [T]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.70 %
Unclassified	root	N/A	31.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.70 %
Unclassified	root	N/A	31.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.70 %
Unclassified	root	N/A	31.30 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	60.87 %
Unclassified	root	N/A	31.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	49.57 %
Unclassified	root	N/A	31.30 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	47.83 %
Unclassified	root	N/A	31.30 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	18.26 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.87 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.87 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	13.04 %
Methylibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	5.22 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.87 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.87 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	13.04 %
unclassified Methylibium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium	1.74 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.87 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.87 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	13.04 %
Methylibium sp. CF468	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. CF468	1.74 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.87 %
Massilia violaceinigra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia violaceinigra	0.87 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.30 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	13.04 %
Methylibium sp. CF468	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. CF468	1.74 %
Mycobacterium sp. UM_WWY	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_WWY	0.87 %
Massilia violaceinigra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia violaceinigra	0.87 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002705\|JGI25156J39149_1000212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	40452	Open in IMG/M
3300003316\|rootH1_10069583	All Organisms → cellular organisms → Bacteria → Proteobacteria	2110	Open in IMG/M
3300003316\|rootH1_10069584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1643	Open in IMG/M
3300003320\|rootH2_10073493	Not Available	1517	Open in IMG/M
3300003323\|rootH1_10241830	All Organisms → cellular organisms → Bacteria → Proteobacteria	2268	Open in IMG/M
3300003752\|Ga0055539_1000249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	34756	Open in IMG/M
3300005327\|Ga0070658_10035895	All Organisms → cellular organisms → Bacteria → Proteobacteria	3994	Open in IMG/M
3300005327\|Ga0070658_10599278	Not Available	955	Open in IMG/M
3300005327\|Ga0070658_11087153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	696	Open in IMG/M
3300005329\|Ga0070683_100209625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1851	Open in IMG/M
3300005330\|Ga0070690_100015347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4567	Open in IMG/M
3300005334\|Ga0068869_100196646	All Organisms → cellular organisms → Bacteria → Proteobacteria	1588	Open in IMG/M
3300005337\|Ga0070682_101786076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_WWY	536	Open in IMG/M
3300005339\|Ga0070660_100032159	All Organisms → cellular organisms → Bacteria	3946	Open in IMG/M
3300005339\|Ga0070660_100101177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	2284	Open in IMG/M
3300005339\|Ga0070660_100253065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300005343\|Ga0070687_101304232	Not Available	539	Open in IMG/M
3300005356\|Ga0070674_100230363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia violaceinigra	1445	Open in IMG/M
3300005365\|Ga0070688_100561131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	869	Open in IMG/M
3300005366\|Ga0070659_100964637	Not Available	747	Open in IMG/M
3300005466\|Ga0070685_11158484	Not Available	586	Open in IMG/M
3300005513\|Ga0077120_1007898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	10873	Open in IMG/M
3300005519\|Ga0077119_10016274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	6991	Open in IMG/M
3300005519\|Ga0077119_10017461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. CF468	6644	Open in IMG/M
3300005519\|Ga0077119_10034772	All Organisms → cellular organisms → Bacteria	3882	Open in IMG/M
3300005519\|Ga0077119_10037934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3614	Open in IMG/M
3300005519\|Ga0077119_10076316	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300005519\|Ga0077119_10076727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1998	Open in IMG/M
3300005519\|Ga0077119_10373250	Not Available	505	Open in IMG/M
3300005539\|Ga0068853_101079669	Not Available	774	Open in IMG/M
3300005539\|Ga0068853_101181457	Not Available	738	Open in IMG/M
3300005539\|Ga0068853_101350901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	689	Open in IMG/M
3300005563\|Ga0068855_100028783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium → unclassified Methylibium → Methylibium sp. CF468	6647	Open in IMG/M
3300005563\|Ga0068855_100788790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1010	Open in IMG/M
3300005577\|Ga0068857_100405219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	1269	Open in IMG/M
3300005578\|Ga0068854_100288032	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300005616\|Ga0068852_101290996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	752	Open in IMG/M
3300005640\|Ga0075035_1043540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	948	Open in IMG/M
3300005640\|Ga0075035_1533518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	679	Open in IMG/M
3300005640\|Ga0075035_1578336	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300006195\|Ga0075366_10011498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Methylibium	4999	Open in IMG/M
3300006353\|Ga0075370_10097804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1697	Open in IMG/M
3300006881\|Ga0068865_100180785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1624	Open in IMG/M
3300009093\|Ga0105240_10034923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6482	Open in IMG/M
3300009093\|Ga0105240_10091481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3717	Open in IMG/M
3300009093\|Ga0105240_12542418	Not Available	529	Open in IMG/M
3300009148\|Ga0105243_10378937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1308	Open in IMG/M
3300009545\|Ga0105237_11592914	Not Available	660	Open in IMG/M
3300009551\|Ga0105238_11152020	Not Available	799	Open in IMG/M
3300009660\|Ga0105854_1071225	Not Available	1066	Open in IMG/M
3300013296\|Ga0157374_10244838	Not Available	1764	Open in IMG/M
3300013296\|Ga0157374_12485693	Not Available	545	Open in IMG/M
3300014968\|Ga0157379_10464453	Not Available	1170	Open in IMG/M
3300014969\|Ga0157376_11542893	Not Available	698	Open in IMG/M
3300015371\|Ga0132258_10844127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2311	Open in IMG/M
3300015374\|Ga0132255_100688310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1517	Open in IMG/M
3300021178\|Ga0210408_10892361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	692	Open in IMG/M
3300021403\|Ga0210397_10074808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	2230	Open in IMG/M
3300021403\|Ga0210397_10210748	All Organisms → cellular organisms → Bacteria → Proteobacteria	1393	Open in IMG/M
3300021475\|Ga0210392_10062866	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300021478\|Ga0210402_10529275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1094	Open in IMG/M
3300022908\|Ga0247779_1000747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	17827	Open in IMG/M
3300025226\|Ga0209674_100003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2196646	Open in IMG/M
3300025231\|Ga0207427_100374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	27280	Open in IMG/M
3300025242\|Ga0209258_102330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5031	Open in IMG/M
3300025246\|Ga0209646_1000066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	244823	Open in IMG/M
3300025250\|Ga0209026_1009621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1879	Open in IMG/M
3300025250\|Ga0209026_1040924	Not Available	671	Open in IMG/M
3300025256\|Ga0209759_1045588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	716	Open in IMG/M
3300025256\|Ga0209759_1058941	Not Available	548	Open in IMG/M
3300025272\|Ga0209455_1028704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	969	Open in IMG/M
3300025909\|Ga0207705_10013093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5985	Open in IMG/M
3300025909\|Ga0207705_10460574	Not Available	986	Open in IMG/M
3300025909\|Ga0207705_11143427	Not Available	599	Open in IMG/M
3300025911\|Ga0207654_10041289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2604	Open in IMG/M
3300025913\|Ga0207695_10008806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12572	Open in IMG/M
3300025913\|Ga0207695_10046327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4609	Open in IMG/M
3300025914\|Ga0207671_11178425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	600	Open in IMG/M
3300025914\|Ga0207671_11360117	Not Available	551	Open in IMG/M
3300025919\|Ga0207657_10036358	All Organisms → cellular organisms → Bacteria	4408	Open in IMG/M
3300025919\|Ga0207657_10073971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2878	Open in IMG/M
3300025919\|Ga0207657_10154359	All Organisms → cellular organisms → Bacteria → Proteobacteria	1868	Open in IMG/M
3300025920\|Ga0207649_10197507	Not Available	1419	Open in IMG/M
3300025926\|Ga0207659_10454591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1079	Open in IMG/M
3300025932\|Ga0207690_10819275	Not Available	770	Open in IMG/M
3300025938\|Ga0207704_10154686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1623	Open in IMG/M
3300025949\|Ga0207667_10001159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	33115	Open in IMG/M
3300025949\|Ga0207667_10180489	Not Available	2168	Open in IMG/M
3300025949\|Ga0207667_10596983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1114	Open in IMG/M
3300025960\|Ga0207651_10064359	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300026041\|Ga0207639_10021544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4630	Open in IMG/M
3300026041\|Ga0207639_11612934	Not Available	608	Open in IMG/M
3300026089\|Ga0207648_11677481	Not Available	597	Open in IMG/M
3300026116\|Ga0207674_10495804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1180	Open in IMG/M
3300026116\|Ga0207674_12022222	Not Available	541	Open in IMG/M
3300026118\|Ga0207675_100104058	All Organisms → cellular organisms → Bacteria → Proteobacteria	2675	Open in IMG/M
3300026121\|Ga0207683_10365423	All Organisms → cellular organisms → Bacteria → Proteobacteria	1325	Open in IMG/M
3300026142\|Ga0207698_11072767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	818	Open in IMG/M
3300027817\|Ga0209112_10287128	Not Available	580	Open in IMG/M
3300028573\|Ga0265334_10211897	Not Available	671	Open in IMG/M
3300029951\|Ga0311371_10090824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4909	Open in IMG/M
3300030000\|Ga0311337_11613165	Not Available	569	Open in IMG/M
3300030520\|Ga0311372_12695159	Not Available	550	Open in IMG/M
3300031231\|Ga0170824_107503680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1228	Open in IMG/M
3300031231\|Ga0170824_128569039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1021	Open in IMG/M
3300031716\|Ga0310813_10045645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3200	Open in IMG/M
3300031730\|Ga0307516_10011529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	9593	Open in IMG/M
3300031902\|Ga0302322_100419357	Not Available	1540	Open in IMG/M
3300031902\|Ga0302322_102605043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	623	Open in IMG/M
3300031939\|Ga0308174_10421224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1079	Open in IMG/M
3300032261\|Ga0306920_102897051	Not Available	651	Open in IMG/M
3300034170\|Ga0370487_0000320	All Organisms → cellular organisms → Bacteria → Proteobacteria	12743	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	75.65%
Environmental	Environmental	24.35%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	75.65%
Terrestrial	Environmental → Terrestrial	24.35%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.35%
Soil	Environmental → Terrestrial → Soil	19.13%
Roots	Host-Associated → Plants → Roots	18.26%
Peat	Environmental → Terrestrial → Peat	4.35%
Rhizome	Host-Associated → Plants → Rhizome	3.48%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.87%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Epiphytes	Host-Associated → Plants → Roots → Epiphytes	11.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.70%
Loam	Environmental → Terrestrial → Soil → Loam	6.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.35%
Endophytes	Host-Associated → Plants → Roots → Endophytes	3.48%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Unclassified	Host-Associated → Plants → Roots → Epiphytes → Unclassified	11.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.48%
Unclassified	Host-Associated → Plants → Roots → Endophytes → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	15.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	13.04%
Arabidopsis Root	Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root	11.30%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.35%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	3.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.48%
Arabidopsis Root	Host-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root	3.48%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	3.48%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.74%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.74%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002705	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS	Host-Associated	Open in IMG/M
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003323	Sugarcane root Sample H1	Host-Associated	Open in IMG/M
3300003752	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005513	Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)	Host-Associated	Open in IMG/M
3300005519	Combined assembly of arab plate scrape CL_Col (Combined Assembly)	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025226	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025231	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025242	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025246	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes)	Host-Associated	Open in IMG/M
3300025250	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes)	Host-Associated	Open in IMG/M
3300025256	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)	Host-Associated	Open in IMG/M
3300025272	Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25156J39149_100021226	3300002705	Arabidopsis Root	MQTRHLLTSATLALAFCAPGAFAAGDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH*
rootH1_100695833	3300003316	Sugarcane Root And Bulk Soil	MNTRHLITSATLALAFFGSSAFAADEGCRTVANGVQICDVHTGHERSRDAVVAELQAKADTSTGCRTNANGVQICDVATGRERSRESVVAEMRAPSAYKIEGCRTVANGVQKCDVPSPYASRDETAVAAAR*
rootH1_100695842	3300003316	Sugarcane Root And Bulk Soil	MNTRHVITSATLALAFFSSGAFAADEGCRTVANGVQICDVHTGHERSRDAVVADLQSKADTSTGCRTNANGVQTCDVPTGRERSRESVVAEMGAPSAYKIEGCRTVANGVQKCDVPSAVSRPDTALAAAH*
rootH2_100734932	3300003320	Sugarcane Root And Bulk Soil	MITRHLITSATLALAFFGSGAFAADEGCRTVANGVQICDVHTGHERSRDAVAAEIHAKADTSTGCRTNANGVQICDVPTGRERSREAVVAELHGAAGYTIEGCRTVANGVQKCDVPSPYTARNETAIAAAH*
rootH1_102418302	3300003323	Sugarcane Root And Bulk Soil	MNIRHLITFAALTLAFSSSGAFAADEGCRTVANGVQICDVHTGHERSRDAVVAEITSQADTSTGCRTNANGVQTCDVPTGRERSREAVVAELHGGAGYTIEGCRTVANGVQKCDVPSPYALRRDTALAAAR*
Ga0055539_100024932	3300003752	Arabidopsis Root	MNTRHLITSATLALAFFSSGAFAADEGCRTVANGVQICDVHTGHERSRDAVVADLQAKADTSTGCRTNANGVQICDVPTGRERSRESVVAEMSAAPAYKIEGCRTVANGVQKCDVPSATSRADTAVAAAH*
Ga0070658_100358956	3300005327	Corn Rhizosphere	AALALAFCAPGAFAADSCRTVANGVQKCDVTTGQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELHGAGAYAIEGCRTVANGVQKCDLPASIPHADTALARAHSVPVETH*
Ga0070658_105992782	3300005327	Corn Rhizosphere	MQTRHLLSTAALAFVFCTSGAFAADSCRTLANGVQKCDVTTGQERARDDVVAEIRAKADTSTGCRTVANGVQKCDVVTGRERSREAVVADLQTGPAYAIEGCRTVANGVQKCDLPTAYQHGDTAVAKASTAAVQAR*
Ga0070658_110871532	3300005327	Corn Rhizosphere	MNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQACDVPTGHEASRDAVVAQIHAKADTSTGCRTVANGVQVCDVPTGRERSRDAVVADLHGGADYTIEGCRTVANGVQ
Ga0070683_1002096251	3300005329	Corn Rhizosphere	MQTRHLLTSATLALAFCAPGAFAADDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH*
Ga0070690_1000153474	3300005330	Switchgrass Rhizosphere	MNTRHLLNAAAIALAFCASGAFAADDGCRTNANGVQTCDLATGHERSREAVAAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHDGASYTIEGCRTVANGVQKCDVPSPYALRRDTAVAASH*
Ga0068869_1001966463	3300005334	Miscanthus Rhizosphere	MNTRHLLHATAIALAFCASGAFAADDGCRTNANGVQTCDLATGHERSREAVAAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHDGASYTIEGCRTVANGVQKCDVPSPYALRRDTAVAASH*
Ga0070682_1017860761	3300005337	Corn Rhizosphere	MNTRHLLHAAALALALCAPGAFAADDGCRTNANGVQLCDVPTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVADLHGGAGYTIEGCRTVANGVQKCDVP
Ga0070660_1000321592	3300005339	Corn Rhizosphere	MNTRHLLSCATLALAFCAPGAFAADGCRTVANGVQKCDVTTGQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELHGAATYAIEGCRSVANGVQKCDLPASTPHPDTALAKARSTPAETH*
Ga0070660_1001011772	3300005339	Corn Rhizosphere	MQTRHLLTSATLALAFCAPCAFAAGDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH*
Ga0070660_1002530653	3300005339	Corn Rhizosphere	APGAFAADDGCRTNANDVQTCDVTTGHEASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTVRETAVAAAH*
Ga0070687_1013042321	3300005343	Switchgrass Rhizosphere	MNTRHLLNAAAIALAFCASGAFAADDGCRTNANGVQTCDLATGHERSREAVAAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHDGASYTIEGCRTVANGVQKCDVPSPYA
Ga0070674_1002303632	3300005356	Miscanthus Rhizosphere	MNTRHLLHAAAIALAFCASGAFAADDGCRTNANGVQTCDVTTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQTCDVPTPYTVRETAVAAAH*
Ga0070688_1005611311	3300005365	Switchgrass Rhizosphere	MLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTREAVAAEIHASADSSTGCRTNANGVQICDVPTGHERSRESVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYAPRRDTA
Ga0070659_1009646372	3300005366	Corn Rhizosphere	GQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELRGAAAYAIEGCRTVANGVQKCDVVTGRERSRDAVVAELQAAPAYAIEGCRTVANGVQKCDLPAAYPGRDTAVAKANTGTLQAR*
Ga0070685_111584841	3300005466	Switchgrass Rhizosphere	MLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVAQVHAKADTTTGCRTVANGVQVCDVPTGRERSREAVVAELHDGKGYTIEGCRTVANGVQKCDVPTPYALRRDTAVAASH*
Ga0077120_100789810	3300005513	Arabidopsis Rhizosphere	MNTRHLLHAAALALAFCAPGAFAADDGCRTNANGVQLCDVPTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERTREAVVAELHDGASYKIEGCRTVANGVQKCDVPSPYTSRHDTAVAAAH*
Ga0077119_100162744	3300005519	Arabidopsis Root	MQTRHLLTSAALALAFCASGAFAADEGCRTVANGVQHCDVTTGHERTRDDVVADIHASADTATGCRTIANGVQKCDVITGHERSREDVVAELLGRSPSTYTIAGCRTVANGVQKCDVPTAAPRASDTAVAATHH*
Ga0077119_100174617	3300005519	Arabidopsis Root	MDTRHLLNATAIALAFCTSGAFAADDGCRTNANGVQTCDVATGHESSRAAVVAEIHAKADTSTGCRTVANGVQVCDLPTGRERTREAVVADLHGGAGYAIEGCRTVANGVQKCDVPTPFAARRETTTAAAR*
Ga0077119_100347724	3300005519	Arabidopsis Root	MQTRHLLSTAALAFVFCTSGAFAADSCRTIANGVQKCDVTTGQERARDDVVAEIRAKADTSTGCRTVANGVQKCDVVTGHERSREAVVAELQAGPAYAIEGCRTVANGVQKCDLPTAYQQGDTAVAKASTAAVQAR*
Ga0077119_100379342	3300005519	Arabidopsis Root	MQTRHLISSAALALALCAPAAFAAEACRTIVNGIQKCDVVTGQERSSADVAAEVHAKADTSTGCRTIVNGIQKCDVPTGHERSREDVVAELHGGSGDAIAGCRTIVNGIQKCDVPAAYQRGNETAIAGAPAAQRQ*
Ga0077119_100763162	3300005519	Arabidopsis Root	MQTRHLLTSAALALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTRDAVVADIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYALRRDTALAAAH*
Ga0077119_100767272	3300005519	Arabidopsis Root	MHTRHLITSAALALAFCASGAFAADEGCRTVANGVQHCDVATGHERSRAEVVAEIHASADTSTGCRTVANGVQHCDVPTGRERSRDEVVAEIHGGAGYTIEGCRTVANGVQRCDVPSAYTLRRDTAVAAAH*
Ga0077119_103732501	3300005519	Arabidopsis Root	ALALVFCASGAFAADGCRTVVNGIQKCDVPSGQERARDDVIAEIHAKADTSTGCRVVANGVQKCDVLTGHERSREDIVAELHAGQTYTIEGCRTVANGVQKCDLPSNYQRGSDTSVAKLR
Ga0068853_1010796692	3300005539	Corn Rhizosphere	MNTRHLLNAAAIALAFCASGAFAADDGCRTNANGVQTCDVTTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTSRHETAMAAAH*
Ga0068853_1011814571	3300005539	Corn Rhizosphere	MQTRHLLTSATLALAFCAPGAFAADDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVP
Ga0068853_1013509012	3300005539	Corn Rhizosphere	TRHLLSCATLALAFCVPGAFAADSCRTVANGVQKCDVTTGQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELRGAAAYAIEGCRTVANGVQKCDLPASIPHADTALAKARSTPAETH*
Ga0068855_1000287836	3300005563	Corn Rhizosphere	MNTRHLLHAAAITLAFCAPGAFAADDGCRSSANGVQTCDVTTGHEASRDAVVAQIHAKADTSTGCRTVANGVQVCDVPTGRERSRQAVVAELRGGTGYTIEGCRTVANGVQKCDVPTPYVPRRETAVAAAH*
Ga0068855_1007887902	3300005563	Corn Rhizosphere	MLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTREAVAAEIHASADSSTGCRTNANGVQICDVPTGHERSRESVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYAPRRDTALAAAH*
Ga0068855_1026117991	3300005563	Corn Rhizosphere	MNTRHLLSCATLALAFCAPGAFAADGCRTVANGVQKCDVTTGQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELHGAATYAIEGCRSVA
Ga0068857_1004052192	3300005577	Corn Rhizosphere	MQTRHLLHSAALALAFCAPGAFAADDGCRSNANGVQTCDVATGHERTREAVVAEMHARADTSTGCRTNANGVQICDVPTGHERSREAVVAELRGAGGYTIEGCRTVANGVQKCDVPSPYVLRRDTAVAAAH*
Ga0068854_1002880321	3300005578	Corn Rhizosphere	MQTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVAQIHAKADTSTGCRTVANGVQVCDVPTGRERSRQAVVAELRGGTGYTIEGCRTVANGVQKCDVPTPYVPRRETAVAAAH*
Ga0068856_1021457091	3300005614	Corn Rhizosphere	RRVDAADDAARRASPHSHEIDMPTRHLLSCATLALAFCASGAFAADGCRTVANDVQKCDVATGQERARDDVVAEIRARTDNATGCRTVANGVQKCDVITGWERSRAEVVAEIRSGSADGVEGCRTVANGVQKCDLPASYRHAGTALAKAHSAPAQTH*
Ga0068852_1012909962	3300005616	Corn Rhizosphere	MNTRHLLHAAAITLAFCAPGAFAADDGCRSNANGVQTCDVTTGHEASRDAVVAQIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVP
Ga0075035_10435402	3300005640	Permafrost Soil	ETAMQTRHLISSAALAFVFCASGAFAADGCRTVANGVQKCDVTSGQERTRDDVVAEMHAQDASTTGCRTIVNGIQKCDVPTGHERSREDVVAELHGGAAYGVEGCRTVANGVQKCDLPSLPRAGDTAVAHVQPAAASNRQQ*
Ga0075035_15335182	3300005640	Permafrost Soil	TVMQTRHLLTALTLALGFSASGAFAADVGCRTVANGVEKCDVPTGAERSREAVVAEIHAKADTSTGCRTVANGVQKCDVPTQGTRDAVMADLHDASPYTIDGCRTIANGVQKCDVPSSYHRADAAVAKAPASTEAH*
Ga0075035_15783361	3300005640	Permafrost Soil	EHGSRGGSARITSQRETLMQTRHLISSAALALVFCATGAFAADGCRTVANGVQKCDVTSGQERTRDDVVAEMHAQAASSNGCRTVANGVQKCDVPTGRERSREDVVAELHGGTPYGVEGCRTVANGVQKCDLPSSYQRGNDTAVAKLH*
Ga0075366_100114983	3300006195	Populus Endosphere	MNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTVRETAVAAAH*
Ga0075370_100978042	3300006353	Populus Endosphere	MNTRHLLTCAALAFCAAGAFAADDGCRTNANGVQTCDVATGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSRDAIVAEIKGGSAYTIEGCRTVANGVQKCDVPTAYTSRRETAIAATH*
Ga0068865_1001807852	3300006881	Miscanthus Rhizosphere	MNTRHLLHAAALALAFCAPGAFAADDGCRTNANGVQLCDVPTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVIAELHDGASYKIEGCRTVANGVQKCDVPSPYTSRHDTAVAAAH*
Ga0105240_100349233	3300009093	Corn Rhizosphere	MTTRLRDACAPPAVGDAGLPRKQHENTMNTRHLLHAAALALALCAPGAFAADDGCRTNANGVQLCDVPTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHDGASYKIEGCRTVANGVQKCDVPSPYTSHHDTAVAAAH*
Ga0105240_100914814	3300009093	Corn Rhizosphere	MLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTREAVAAEIHASADSSTGCRTNANGVQICDVPTGHERSRESVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYAARRDTALAAAH*
Ga0105240_125424181	3300009093	Corn Rhizosphere	MQTRHLLSCATLALAFCAPGAFAADSCRTVANGVQKCDVTTGQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELHGTGAYAIEGCRTVANGVQKCDLPASIPHADTALARAHSVPVE
Ga0105243_103789372	3300009148	Miscanthus Rhizosphere	MQTRHLLSAAAIALSFCASGAFAADEGCRTVANGVQHCDVATGHERSRDEVVADLHAQADTSTGCRTVANGVQKCDVITGHERSREDVVAELLGRPTYTIAGCRTVANGVQKCDVPAAPQRASDTAVAATHH*
Ga0105237_115929141	3300009545	Corn Rhizosphere	PPARRCARQHESENLMLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTREAVAAEIHASADSSTGCRTNANGVQICDVPTGHERSRESVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYAPRRDTALAAAH*
Ga0105238_111520202	3300009551	Corn Rhizosphere	MMNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQACDVPTGHEASRDAVVAQIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVADLHGGAGYTIEGCRTVANGVQKCDVPTPYVSRHETAVAAVH*
Ga0105854_10712252	3300009660	Permafrost Soil	MQTRHLISSAALAFVFCASGAFAADGCRTVANGVQKCDVTSGQERTRDDVVAEMHAQDASTTGCRTIVNGIQKCDVPTGHERSREDVVAELHGGAAYGVDGCRTVANGVQKCDQPSLPRAGDTAVAHVQPAAASSRQQ*
Ga0157374_102448382	3300013296	Miscanthus Rhizosphere	MQTRHLLSCATLALAFCAPGAFAADSCRTVANGVQKCDVTTGQEHARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELHGAPAYTIEGCRTVANGVQKCDLPASIPHADTALAKARSAPVETH*
Ga0157374_124856931	3300013296	Miscanthus Rhizosphere	AIALAFCAPGAFAADDGCRTNANGVQTCDVPTGHERSREAVAAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHDGASYTIEGCRTVANGVQKCDVPSPYALRRDTAVAASH*
Ga0157379_104644531	3300014968	Switchgrass Rhizosphere	AAGAPPARRCARQHESENLMLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDLTTGHERGRDAVAAEIHAKADASTGCRTVANGVQVCDVPTGRERSREAVVAELHDGTGYSIEGCRTVANGVQKCDVPSPYALRRDTAVAASH*
Ga0157376_115428932	3300014969	Miscanthus Rhizosphere	SGAFAADDGCRTNANGVQTCDLATGHERSREAVVAEIHAKADTSTGCRTVVNGVQVCDMPTGRERSREAVVAELHDGASYTIEGCRTVANGVQKCDVPSPYALRSDTAVAASH*
Ga0132258_108441271	3300015371	Arabidopsis Rhizosphere	MRAPPNESENTMNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYALRRDTAVAATH*
Ga0132255_1006883102	3300015374	Arabidopsis Rhizosphere	MRAPPNESENTMNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTVRETAVAAAH*
Ga0210408_108923611	3300021178	Soil	RHLLSSAALALLFCATGAFAADGCRTVANGVQKCDVTSGQERSREDVQAEIHAKADTSTGCRTVANGVQKCDVPTGREASRDAVVAALHGGSTYTIEGCRTVANGVQKCDVPSAYQRSSDTAVAKSH
Ga0210397_100748081	3300021403	Soil	RVTPLHETAMQTRHLLSSAALALLFCASGAFAADGCRTVANGVQICDVTSGAELTRDAVVAEIHARPDTSTGCRTVANGVQKCDVPTGRESSRADVVANLRGGPAYTIDGCRTVANGVQKCDVPSAYQRSSDTAVARLR
Ga0210397_102107481	3300021403	Soil	MNTRHLLTALTLALGCTAGAFAADVGCRTVANGVEKCDVPTGTERSRADVVAEIHAKADTSTGCRTIANGVQKCDVPTGRERSREDVVAEVLNGSSGYAVAGCRTVANGVQKCDVPTGRELSREAVVAQSHGGAGDAIEGCRT
Ga0210392_100628661	3300021475	Soil	AGESSYSDPKPTGPTRATTAAHEAAPREDKSNDSEITMNTRHLLTALTLALGCTAGAFAADVGCRTIANGVEKCDVPTGTERSRADVVAEIHAKADTSTGCRTIANGVQKCDVPTGVERSREDVVAEVLNGSSGYAVAGCRTVANGVQKCDVPAQRGDTAFAKAPSAVQAH
Ga0210402_105292752	3300021478	Soil	MQTRHLLSSAALALAFCASGAFATDVGCRLVANGVQKCDVPTGTERSRDAVVADIHAQADSSTGCRTIANGVQKCDVTTGRERSREDVVAEVLNGSSGYAIAGCRTVANGVQKCDLPSGYPHSDDTAVAKLHATTAVEAH
Ga0247779_100074710	3300022908	Plant Litter	MNTRHLLTALTLALGCAASGAFAADVGCRTIANGVQKCDVPTGAERTQEAVAAEIHAKADTSTGCRTIANGVQKCDVPTAADRDAVTAQVRDISPYTIDGCRTIANGVQKCDVPSHYQPRTAIATAPGKAAEAH
Ga0209674_100003646	3300025226	Arabidopsis Root	MNTRHLITSATLALAFFSSGAFAADEGCRTVANGVQICDVHTGHERSRDAVVADLQAKADTSTGCRTNANGVQICDVPTGRERSRESVVAEMSAAPAYKIEGCRTVANGVQKCDVPSATSRADTAVAAAH
Ga0207427_10037422	3300025231	Arabidopsis Rhizosphere	MNTRHLLHAAALALAFCAPGAFAADDGCRTNANGVQLCDVPTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERTREAVVAELHDGASYKIEGCRTVANGVQKCDVPSPYTSRHDTAVAAAH
Ga0209258_1023306	3300025242	Arabidopsis Root	MQTRHLLTSAALALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTRDAVVADIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYALRRDTALAAAH
Ga0209646_100006668	3300025246	Arabidopsis Root	MQTRHLLTSATLALAFCAPGAFAAGDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH
Ga0209026_10096212	3300025250	Arabidopsis Root	MQTRHLISSAALALALCAPAAFAAEACRTIVNGIQKCDVVTGQERSSADVAAEVHAKADTSTGCRTIVNGIQKCDVPTGHERSREDVVAELHGGSGDAIAGCRTIVNGIQKCDVPAAYQRGNETAIAGAPAAQRQ
Ga0209026_10409241	3300025250	Arabidopsis Root	MQTRHLLTSAALALAFCASGAFAADEGCRTVANGVQHCDVTTGHERTRDDVVADIHASADTATGCRTIANGVQKCDVITGHERSREDVVAELLGRSPSTYTIAGCRTVANGVQKCDVPTAAPRASDTAVAATHH
Ga0209759_10455882	3300025256	Arabidopsis Root	MHTRHLITSAALALAFCASGAFAADEGCRTVANGVQHCDVATGHERSRAEVVAEIHASADTSTGCRTVANGVQHCDVPTGRERSRDEVVAEIHGGAGYTIEGCRTVANGVQRCDVPSAYTLRRDTAVAAAH
Ga0209759_10589412	3300025256	Arabidopsis Root	MQTRHLLTSAALALAFCASGAFAADEGCRTVANGVQHCDVTTGHERTRDDVVADIHASADTATGCRTIANGVQKCDVITGHERSREDVVAELLGRSPSTYTIAGCRTVANGVQKCD
Ga0209455_10287041	3300025272	Arabidopsis Root	SGAFAADDGCRTNANGVQTCDVATGHESSRAAVVAEIHAKADTSTGCRTVANGVQVCDLPTGRERTREAVVADLHGGAGYAIEGCRTVANGVQKCDVPTPFAARRETTTAAAR
Ga0207705_100130932	3300025909	Corn Rhizosphere	MQTRHLLSCAALALAFCAPGAFAADSCRTVANGVQKCDVTTGQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELHGAGAYAIEGCRTVANGVQKCDLPASIPHADTALARAHSVPVETH
Ga0207705_104605742	3300025909	Corn Rhizosphere	MQTRHLLSTAALAFVFCTSGAFAADSCRTLANGVQKCDVTTGQERARDDVVAEIRAKADTSTGCRTVANGVQKCDVVTGRERSREAVVADLQTGPAYAIEGCRTVANGVQKCDLPTAYQHGDTAVAKASTAAVQAR
Ga0207705_111434271	3300025909	Corn Rhizosphere	MPRDAPHLTSHETAMPTRHLLSSAALALVFCTSGAFAADSCRTIANGVQKCDVVTGQERARNEVVAEISAKADTSTGCRTVANGVQKCDVVTGRERSRDAVVAELQAAPAYAIEGCRTVANGVQKCDLPAAYPGRDTAVAKAN
Ga0207654_100412892	3300025911	Corn Rhizosphere	MQTRHLLTSATLALAFCAPGAFAADDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH
Ga0207695_100088063	3300025913	Corn Rhizosphere	MLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTREAVAAEIHASADSSTGCRTNANGVQICDVPTGHERSRESVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYAARRDTALAAAH
Ga0207695_100463272	3300025913	Corn Rhizosphere	MNTRHLLHAAALALALCAPGAFAADDGCRTNANGVQLCDVPTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHDGASYKIEGCRTVANGVQKCDVPSPYTSHHDTAVAAAH
Ga0207671_111784251	3300025914	Corn Rhizosphere	CAPGAFAADDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH
Ga0207671_113601171	3300025914	Corn Rhizosphere	AADDGCRTNANGVQTCDVTTGHERTREAVAAEIHASADSSTGCRTNANGVQICDVPTGHERSRESVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYAPRRDTALAAAH
Ga0207657_100363585	3300025919	Corn Rhizosphere	MNTRHLLSCATLALAFCAPGAFAADGCRTVANGVQKCDVTTGQERARDDVVAEIHAKADTSTGCRTVANGVQICDVVTGRERSREAVVAELHGAATYAIEGCRSVANGVQKCDLPASTPHPDTALAKARSTPAETH
Ga0207657_100739712	3300025919	Corn Rhizosphere	MQTRHLLTSATLALAFCAPCAFAAGDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH
Ga0207657_101543591	3300025919	Corn Rhizosphere	MNTRHLLHAAAIALAFCAPGAFAADDGCRTNANDVQTCDVTTGHEASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTVRETAVAAAH
Ga0207649_101975071	3300025920	Corn Rhizosphere	DAQPGRPSRPTDARAINESENTMNTRHLLPAAAIALAFFAPGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYALRRDTAVAAVH
Ga0207659_104545912	3300025926	Miscanthus Rhizosphere	MNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVAQIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTVRETAVAAAH
Ga0207690_108192751	3300025932	Corn Rhizosphere	MNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQTCDVTTGHEASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTVRETAVAAAH
Ga0207704_101546863	3300025938	Miscanthus Rhizosphere	MNTRHLLHAAALALAFCAPGAFAADDGCRTNANGVQLCDVPTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVIAELHDGASYKIEGCRTVANGVQKCDVPSPYTSRHDTAVAAAH
Ga0207667_1000115930	3300025949	Corn Rhizosphere	MNTRHLLHAAAITLAFCAPGAFAADDGCRSNANGVQTCDVTTGHEASRDAVVAQIHAKADTSTGCRTVANGVQVCDVPTGRERSRQAVVAELRGGTGYTIEGCRTVANGVQKCDVPTPYVPRRETAVAAAH
Ga0207667_101804893	3300025949	Corn Rhizosphere	MQTRHLLSTAALAFVFCTSGAFAADSCRTIANGVQKCDVTTGQERAREDVVAEIRVQADTSTGCRTVANGVQKCDVVTGRERSRDAVVAELQAAPAYGIAGCRTVANGVQKCDLPTAYPHGDTAVAKANTGAVQAR
Ga0207667_105969832	3300025949	Corn Rhizosphere	MLTRHLLTSATLALAFCASGAFAADDGCRTNANGVQTCDVTTGHERTREAVAAEIHASADSSTGCRTNANGVQICDVPTGHERSRESVVAELRGGAGYTIEGCRTVANGVQKCDVPSPYAPRRDTALAAAH
Ga0207651_100643592	3300025960	Switchgrass Rhizosphere	MQTRHLLSSAALALVFCTSGAFAAEGCRTVANGVQKCDVTSGQERARDDVVAEIRAKADTSTGCRTVANGVQKCDMPTGRDRSREAVVAELHAAPAYSIEGCRTVANGVQKCDLPASYQHGDTALAKAGTASVQAR
Ga0207639_100215443	3300026041	Corn Rhizosphere	MQTRHLLTSATLALAFCAPGAFAADDGCRTNANGVQTCDVATGNERTREAVAAEIHARADTSTGCRTNANGVQICDVPTGRERSREAVVAELRGPGSYTIEGCRTVANGVQKCDVPSP
Ga0207639_116129342	3300026041	Corn Rhizosphere	MNTRHLLHAAAIALAFCASGAFAADDGCRTNANGVQTCDVTTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHGGAGYTIEGCRTVANGVQKCDVPTPYTSRHETAMAAAH
Ga0207648_116774811	3300026089	Miscanthus Rhizosphere	MNTRHLLNAAAIALAFCASGAFAADDGCRTNANGVQTCDVTTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVADLHGGAGYTIEGCRTVANGVQKCDVPTPYVSRHE
Ga0207674_104958042	3300026116	Corn Rhizosphere	MQTRHLLHSAALALAFCAPGAFAADDGCRSNANGVQTCDVATGHERTREAVVAEMHARADTSTGCRTNANGVQICDVPTGHERSREAVVAELRGAGGYTIEGCRTVANGVQKCDVPSPYVLRRDTAVAAAH
Ga0207674_120222221	3300026116	Corn Rhizosphere	MNTRHLLHAAAIALAFCAPGAFAADDGCRTNANGVQTCDVTTGHEASRDDVIAQIHAKADTATGCRTVANGVQVCDVPTGRERSRQAVVAELRGGTGYTIEGCRTVANGVQKCD
Ga0207675_1001040583	3300026118	Switchgrass Rhizosphere	MNTRHLLNAAAIALAFCASGAFAADDGCRTNANGVQTCDLATGHERSREAVAAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHDGASYTIEGCRTVANGVQKCDVPSPYALRRDTAVAASH
Ga0207683_103654231	3300026121	Miscanthus Rhizosphere	MNTRHLLNAAAIALAFCASGAFAADDGCRTNANGVQTCDVTTGHERSRDAVVAEIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELHSGAGYTIEGCRTVANGVQKCDVPTPYVSRHETAVAAAH
Ga0207698_110727671	3300026142	Corn Rhizosphere	MNTRHLLHAAAITLAFCAPGAFAADDGCRSNANGVQTCDVTTGHEASRDAVVAQIHSKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYVSRRETAVAAAH
Ga0209112_102871281	3300027817	Forest Soil	MQTRHLLSSAAIALAFCASGAFATDVGCRLVANGVEKCDVPTGAERSRADVVAEIHAQADASTGCRTVANGVQKCDVTTGRERSREDVVAEVLNGSSGYAINGCRTVANGVQKCDVPAPRGTIGTPSVWANFRI
Ga0265334_102118971	3300028573	Rhizosphere	MQTRHLLSSAALALVFCASGAFAADGCRTIVNGIQKCDVTSGQERTRDDVVAEIHAKADTSTGCRTVANGVQKCDVPTGRERSREDVVAELHGGPADTIEGCRTVANGVQKCDLPSNYQRGSDTSVAKLH
Ga0311371_100908244	3300029951	Palsa	MNTRHLLTALTLALGCTAGAFAADVGCRTVANGVEKCDVPTGTERSRADVAAEIHAKADTSTGCRTVANGVQKCDVPTGVERTREAVMADFRDASPYTINGCRTIANGVQKCDLPAERGDTAFAKAPSTVQAH
Ga0311337_116131651	3300030000	Fen	MQTRHLLSSAALALAFCAPGAFAADGCRAIVNGIQKCDVTTGQERSRDAVVAEIHVKADTSTGCRTIVNGVQVCDVPTGRERSREDVAADLRGGAGYQIEGCRTIVNGIQKCDVP
Ga0311372_126951591	3300030520	Palsa	TMNTRHLIAALTLALGCTGGAFAADVGCRTVANGVEKCDTPTGTERSRADVVAEIHAKADTSTGCRTVANGVQKCDVPTGTERSREAVMADFRDASPYTINGCRTVANGVQKCDLPAPQGETAVAKAASTVQAH
Ga0170824_1075036802	3300031231	Forest Soil	MQTRHLISSAALALIFCASGAFAADGCRTVANGVQKCDVTSGQELTRDAVVADMHAKADTSTGCRTVANGVQICDVPTGRERSREDVVAELRNGASYGVEGCRTVANGVQKCDLPSNYQRGSDTAIAKLH
Ga0170824_1285690392	3300031231	Forest Soil	MQTRHLISTAALALLFCASGAFAADGCRTVANGVQKCDVTSGQERTREEVVAEIHAKADTSNGCRTVANGVQICDVPTGHERSREAVVAELRSGASTGVDGCRTVANGVQKCDLPSNGQRASDTAIAHVQQAGAPTKQQ
Ga0307509_106305861	3300031507	Ectomycorrhiza	MQARHVLSATALVLGMCASGAFAADPCRTIANGVQKCDVPTGSEMTRDAVVADMHATSSVAATGCRTIANGVQKCDVPTGAERSRASVVADMRSGAMRTNDGCRTIANGVQKCDVPVGERSRTAGVATPPQP
Ga0310813_100456452	3300031716	Soil	MNTRHLLHAAAIALAFYAPGAFAADDGCRTNANGVQTCDVTTGREASRDAVVARIHAKADTSTGCRTVANGVQVCDVPTGRERSREAVVAELRGGAGYTIEGCRTVANGVQKCDVPTPYTVRETAVAAAH
Ga0307516_100115297	3300031730	Ectomycorrhiza	MQTRHLISSAALALVFCASGAFAADGCRTIANGVQKCDLTSGQELTRDDVVAEVHAKADTSTGCRTVANGVQKCDVPTGHERSREDVVAELRSGASYGVEGCRTIANGVQKCDLPSTYRGSDTAVAKSH
Ga0302322_1004193572	3300031902	Fen	PSSPAPNPNAREATMPTRHLFSSAALALAFCVPGAFAADACRTLVNGIQKCDVTTGQERSRDDVVAEIHARADTSTGCRTIANGVQKCDVPTGRERSREDVVTDLKGGAGYRIEGCRTIANGVQKCDLPTPDQRGSDTAVAGAPAAPKQ
Ga0302322_1026050432	3300031902	Fen	LMQTRHLLSSAALALAFCAPGAFAADGCRAIVNGIQKCDVTTGQERSRDAVVAEIHVKADTSTGCRTIVNGVQVCDVPTGRERSREDVAADLRGGAGYQIEGCRTIVNGIQKCDVPSAYQRGSNTAVAGAPAAPQQ
Ga0308174_104212242	3300031939	Soil	MQARHLLSSAALALVFCASGAFAGDGCRTVANGVQKCDVRSGQERTRDDVVAEIHARADTSTGCRTVANGVQKCDVPTGRESSRAEVVAQLHATRDDALDGCRTVANGVQKCDLPTPYALRRDTAIATAR
Ga0306920_1028970511	3300032261	Soil	MNTRHLLNAAAVALAFCASGAFAADSNGCRTNANGVQTCDVATGHERSRDEVVAEIHAKADTSTGCRTVANGVQKCDVPTGRELSREAVVAGIGTPSNYQIEGCRTVANGVQKCDVPSPYAARNDTAIATAH
Ga0370487_0000320_8862_9254	3300034170	Untreated Peat Soil	MQTRHLLSSAALALVFCAPGAFAADGCRTVVNGIQKCDVTSGQERTRDDVVAEIHSKADTSTGCRTVANGVQKCDMPTGRERSREDIVAELHRGQAYTIEGCRTVANGVQKCDLPSKDPRASDTSVAKVH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080227

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences