Metagenome Family F080225

Basic Information
Family ID	F080225
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	58 residues
Representative Sequence	DREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWRSNPS
Number of Associated Samples	99
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.65 %
% of genes near scaffold ends (potentially truncated)	80.87 %
% of genes from short scaffolds (< 2000 bps)	89.57 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Bacteria (57.391 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.870 % of family members)
Environment Ontology (ENVO)	Unclassified (44.348 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.957 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.39% β-sheet: 0.00% Coil/Unstructured: 75.61%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF08713	DNA_alkylation	18.26
PF00486	Trans_reg_C	11.30
PF00583	Acetyltransf_1	6.09
PF00085	Thioredoxin	4.35
PF12697	Abhydrolase_6	0.87
PF04226	Transgly_assoc	0.87
PF13561	adh_short_C2	0.87
PF13231	PMT_2	0.87
PF13432	TPR_16	0.87
PF04909	Amidohydro_2	0.87
PF02586	SRAP	0.87
PF02517	Rce1-like	0.87
PF01471	PG_binding_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	18.26
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.87
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.87
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.39 %
Unclassified	root	N/A	42.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.39 %
Unclassified	root	N/A	42.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.39 %
Unclassified	root	N/A	42.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.22 %
Unclassified	root	N/A	42.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.09 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.61 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	12.17 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.61 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.87 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.61 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	12.17 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.61 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	0.87 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.61 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	12.17 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.61 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	0.87 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.61 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	12.17 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.61 %
Usitatibacter rugosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	0.87 %
Sphingomonas ginkgonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginkgonis	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003322\|rootL2_10375711	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300004114\|Ga0062593_101369686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	754	Open in IMG/M
3300004114\|Ga0062593_103165693	Not Available	527	Open in IMG/M
3300005093\|Ga0062594_102702413	Not Available	550	Open in IMG/M
3300005330\|Ga0070690_100321577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1115	Open in IMG/M
3300005331\|Ga0070670_101729150	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300005332\|Ga0066388_104767997	Not Available	690	Open in IMG/M
3300005333\|Ga0070677_10243808	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005333\|Ga0070677_10327316	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300005334\|Ga0068869_100195928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1591	Open in IMG/M
3300005334\|Ga0068869_101091192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	698	Open in IMG/M
3300005334\|Ga0068869_101880106	Not Available	536	Open in IMG/M
3300005340\|Ga0070689_100516463	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300005347\|Ga0070668_101313161	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300005356\|Ga0070674_101893911	Not Available	542	Open in IMG/M
3300005365\|Ga0070688_100177142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1476	Open in IMG/M
3300005441\|Ga0070700_100708558	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300005457\|Ga0070662_100654869	Not Available	886	Open in IMG/M
3300005459\|Ga0068867_100890457	Not Available	800	Open in IMG/M
3300005466\|Ga0070685_10224943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1231	Open in IMG/M
3300005539\|Ga0068853_100372708	All Organisms → cellular organisms → Bacteria → Proteobacteria	1332	Open in IMG/M
3300005543\|Ga0070672_100168446	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300005547\|Ga0070693_100856061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas ginkgonis	678	Open in IMG/M
3300005548\|Ga0070665_101424203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	702	Open in IMG/M
3300005577\|Ga0068857_101807650	Not Available	598	Open in IMG/M
3300006195\|Ga0075366_10998045	Not Available	522	Open in IMG/M
3300006237\|Ga0097621_100554132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1047	Open in IMG/M
3300006358\|Ga0068871_101939071	Not Available	560	Open in IMG/M
3300006755\|Ga0079222_12686170	Not Available	501	Open in IMG/M
3300006806\|Ga0079220_12111889	Not Available	505	Open in IMG/M
3300006853\|Ga0075420_100421107	Not Available	1154	Open in IMG/M
3300006876\|Ga0079217_11405046	Not Available	546	Open in IMG/M
3300006894\|Ga0079215_10756038	Not Available	669	Open in IMG/M
3300006954\|Ga0079219_10135871	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300007004\|Ga0079218_10978719	Not Available	844	Open in IMG/M
3300007004\|Ga0079218_13946743	Not Available	504	Open in IMG/M
3300009094\|Ga0111539_11369015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	821	Open in IMG/M
3300009094\|Ga0111539_13478861	Not Available	506	Open in IMG/M
3300009176\|Ga0105242_11614317	Not Available	682	Open in IMG/M
3300009176\|Ga0105242_12852701	Not Available	534	Open in IMG/M
3300009527\|Ga0114942_1362196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	571	Open in IMG/M
3300009545\|Ga0105237_12668957	Not Available	510	Open in IMG/M
3300009551\|Ga0105238_10480784	All Organisms → cellular organisms → Bacteria → Proteobacteria	1241	Open in IMG/M
3300009553\|Ga0105249_12255844	Not Available	617	Open in IMG/M
3300009678\|Ga0105252_10112255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1104	Open in IMG/M
3300010366\|Ga0126379_12992648	Not Available	565	Open in IMG/M
3300010399\|Ga0134127_13087592	Not Available	543	Open in IMG/M
3300010401\|Ga0134121_10118650	All Organisms → cellular organisms → Bacteria → Proteobacteria	2232	Open in IMG/M
3300010403\|Ga0134123_11372523	Not Available	745	Open in IMG/M
3300011438\|Ga0137451_1063105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1096	Open in IMG/M
3300012046\|Ga0136634_10414353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	564	Open in IMG/M
3300012212\|Ga0150985_104142331	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300012892\|Ga0157294_10214185	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012900\|Ga0157292_10132773	Not Available	776	Open in IMG/M
3300012903\|Ga0157289_10136548	Not Available	742	Open in IMG/M
3300012904\|Ga0157282_10047908	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300012914\|Ga0157297_10338463	Not Available	581	Open in IMG/M
3300012916\|Ga0157310_10379025	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300012943\|Ga0164241_10013471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6745	Open in IMG/M
3300012943\|Ga0164241_10680928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	746	Open in IMG/M
3300012960\|Ga0164301_10617822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter rugosus	803	Open in IMG/M
3300012985\|Ga0164308_11396764	Not Available	639	Open in IMG/M
3300013308\|Ga0157375_11169704	Not Available	902	Open in IMG/M
3300014325\|Ga0163163_10675153	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300014969\|Ga0157376_12595108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	546	Open in IMG/M
3300015200\|Ga0173480_10335968	Not Available	856	Open in IMG/M
3300015201\|Ga0173478_10176933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	874	Open in IMG/M
3300018061\|Ga0184619_10382183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	640	Open in IMG/M
3300018429\|Ga0190272_12088533	Not Available	603	Open in IMG/M
3300018476\|Ga0190274_10158799	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300019377\|Ga0190264_12180613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	515	Open in IMG/M
3300020027\|Ga0193752_1002279	All Organisms → cellular organisms → Bacteria → Proteobacteria	14600	Open in IMG/M
3300020034\|Ga0193753_10004686	All Organisms → cellular organisms → Bacteria → Proteobacteria	9654	Open in IMG/M
3300022891\|Ga0247770_1256961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	533	Open in IMG/M
3300022903\|Ga0247774_1111444	Not Available	644	Open in IMG/M
3300022915\|Ga0247790_10205773	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300022917\|Ga0247777_1025403	Not Available	2188	Open in IMG/M
3300023263\|Ga0247800_1134476	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300023268\|Ga0247765_1135929	Not Available	528	Open in IMG/M
3300025908\|Ga0207643_10687737	Not Available	661	Open in IMG/M
3300025920\|Ga0207649_10022876	All Organisms → cellular organisms → Bacteria → Proteobacteria	3612	Open in IMG/M
3300025923\|Ga0207681_10158952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1701	Open in IMG/M
3300025923\|Ga0207681_11297930	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025926\|Ga0207659_10776975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	822	Open in IMG/M
3300025926\|Ga0207659_10778946	Not Available	821	Open in IMG/M
3300025931\|Ga0207644_11841989	Not Available	506	Open in IMG/M
3300025938\|Ga0207704_10475858	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300025938\|Ga0207704_10632095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	880	Open in IMG/M
3300025942\|Ga0207689_10238111	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300025945\|Ga0207679_10638073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	962	Open in IMG/M
3300025945\|Ga0207679_11168785	Not Available	706	Open in IMG/M
3300025972\|Ga0207668_10859685	Not Available	806	Open in IMG/M
3300026023\|Ga0207677_10620499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	951	Open in IMG/M
3300026067\|Ga0207678_10409955	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300026089\|Ga0207648_11062252	Not Available	759	Open in IMG/M
3300027886\|Ga0209486_10505694	Not Available	752	Open in IMG/M
3300028802\|Ga0307503_10193770	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	957	Open in IMG/M
3300031232\|Ga0302323_102565734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	582	Open in IMG/M
3300031366\|Ga0307506_10210378	Not Available	719	Open in IMG/M
3300031456\|Ga0307513_10017122	All Organisms → cellular organisms → Bacteria → Proteobacteria	8705	Open in IMG/M
3300031456\|Ga0307513_10028415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6396	Open in IMG/M
3300031547\|Ga0310887_10308299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	905	Open in IMG/M
3300031562\|Ga0310886_10481125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	746	Open in IMG/M
3300031716\|Ga0310813_10658841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	931	Open in IMG/M
3300031940\|Ga0310901_10233842	Not Available	747	Open in IMG/M
3300031995\|Ga0307409_100472809	Not Available	1214	Open in IMG/M
3300032002\|Ga0307416_100067667	All Organisms → cellular organisms → Bacteria	2947	Open in IMG/M
3300032002\|Ga0307416_103598792	Not Available	519	Open in IMG/M
3300032122\|Ga0310895_10019233	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300032126\|Ga0307415_100009758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5402	Open in IMG/M
3300032144\|Ga0315910_11116501	Not Available	615	Open in IMG/M
3300032157\|Ga0315912_10001004	All Organisms → cellular organisms → Bacteria → Proteobacteria	38854	Open in IMG/M
3300032157\|Ga0315912_10164640	Not Available	1739	Open in IMG/M
3300032157\|Ga0315912_10721790	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300032211\|Ga0310896_10816798	Not Available	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.78%
Host-Associated	Host-Associated	45.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.43%
Plants	Host-Associated → Plants	45.22%
Aquatic	Environmental → Aquatic	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.30%
Roots	Host-Associated → Plants → Roots	5.22%
Plant Litter	Environmental → Terrestrial → Plant Litter	3.48%
Sediment	Environmental → Aquatic → Sediment	2.61%
Freshwater	Environmental → Aquatic → Freshwater	1.74%
Peat	Environmental → Terrestrial → Peat	0.87%
Rhizome	Host-Associated → Plants → Rhizome	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.43%
Loam	Environmental → Terrestrial → Soil → Loam	6.09%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%
Ice	Environmental → Aquatic → Freshwater → Ice	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.35%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.35%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.48%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	3.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.48%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.74%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.87%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300022891	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L136-409B-6	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootL2_103757111	3300003322	Sugarcane Root And Bulk Soil	ANILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWKSNPS*
Ga0062593_1013696862	3300004114	Soil	LSDHSGSYVICVTCQRCRHQREMDPRSLANILGWNVTLKQACTRLRCSKCQTRDFRVEVAFDRRPRGWRANPS*
Ga0062593_1031656931	3300004114	Soil	EMVPRSLANILGWNVTLKQACTRLRCSQCQARSFDVQIAFNRKPRGWKSNPS*
Ga0062594_1027024131	3300005093	Soil	LANILGWNVTLKQACTRLRCSKCQARNFRVEVAFNRKPRGWKSNPS*
Ga0070690_1003215771	3300005330	Switchgrass Rhizosphere	QCKHDREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS*
Ga0070670_1017291502	3300005331	Switchgrass Rhizosphere	HSGSYVICVTCRQCRHGREIDPRTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS*
Ga0066388_1047679971	3300005332	Tropical Forest Soil	LANILGWNVTLKQACTRLRCSKCQARSFRVEVAFNRKPRGWKSNPS*
Ga0070677_102438083	3300005333	Miscanthus Rhizosphere	ICVQCRQCKHDREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWKSNPS*
Ga0070677_103273162	3300005333	Miscanthus Rhizosphere	MHNLPQMPAGREIDPRTLANILGWNVTLRQACTRLRCSKCQARSFDVEVAFHRKPRGWRANPS*
Ga0068869_1001959282	3300005334	Miscanthus Rhizosphere	VICVKCRQCSHEREMDPRTLANILGWNVTLKQACTRLRCSKCESRSVAVEIAFNRKPRGWKANPS*
Ga0068869_1010911923	3300005334	Miscanthus Rhizosphere	GAYVICVTCRKCRHQREMEPRALANILGWNTTLKQACTRLRCSKCEGRNFQVEVAFNRKPRGWKSNPS*
Ga0068869_1018801062	3300005334	Miscanthus Rhizosphere	SGAYVICVVCLACQHQREMAPRSLANILGWNVTLTQACTRLRCSKCQSRKFRVEVAFNRKPRGWRANPS*
Ga0070689_1005164631	3300005340	Switchgrass Rhizosphere	VICVKCRQCSHEREMDPRTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFNRKPRGWRANPS*
Ga0070668_1013131612	3300005347	Switchgrass Rhizosphere	KLSDHSGSYVICVTCRQCRHGREIDPRSLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWRSNPS*
Ga0070674_1018939112	3300005356	Miscanthus Rhizosphere	LANILGWNVTLKQACTRLRCSKCQARSFEVQIAFNRKPRGWRANPS*
Ga0070688_1001771423	3300005365	Switchgrass Rhizosphere	HSGAYVICVACRQCRHEREIEPRVLANILGWNVTLKQACTRLRCSKCQSRKFQVEIAFNRKPRGWKANPS*
Ga0070700_1007085582	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VICVTCRQCRHGREIDPRTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS*
Ga0070662_1006548691	3300005457	Corn Rhizosphere	PRSLANILGWNVTLKQACTRLRCSKCQAREFQVEIAFNRRPRGWRSNPS*
Ga0068867_1008904571	3300005459	Miscanthus Rhizosphere	RVLANILGWNVTLKQACTRLRCSKCQSRKFQVEIAFNRKPRGWKANPS*
Ga0070685_102249432	3300005466	Switchgrass Rhizosphere	VICVKCRQCQHEREMAPRSLANILGWNATLKQACTRLRCSKCESRRFDVEIAFNRKPRGWKANPS*
Ga0068853_1003727081	3300005539	Corn Rhizosphere	ICVQCRLCKHDQEIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWKSNPS*
Ga0070672_1001684461	3300005543	Miscanthus Rhizosphere	SDHSGAYVICVICLACLHQREMDPRSLANILGWNVTLRQACTRLRCSKCQARRFRVEIAFNRKPRGWRANPS*
Ga0070693_1008560613	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	HSGAYVICVTCRKCRHQREMEPRALANILGWNITLKQACTRLRCSKCEGRNFQVEVAFNRKPRGWKSNPS*
Ga0070665_1014242032	3300005548	Switchgrass Rhizosphere	MYNVPQMPAGREIDPRTLANILGWNVTLRQACTRLRCSKCQARSFDVEVAFHRKPRGWRANPS*
Ga0068857_1018076503	3300005577	Corn Rhizosphere	LGWNVTLKQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS*
Ga0075366_109980451	3300006195	Populus Endosphere	SYVICVKCRQCSHEREMDPRTLANILGWNVTLKQACTRLRCSQCQARSFDVQIAFNRKPRGWKSNPS*
Ga0097621_1005541322	3300006237	Miscanthus Rhizosphere	MPLPASSIDKLGDHSGSYVICVTCRQCRHEREILPKSLANILGWNVTLKQASTRLRCSKCQARRFDIQIAFDRKPRSWKSNPS*
Ga0068871_1019390711	3300006358	Miscanthus Rhizosphere	SDHSGAYVICVACRQCRHEREIEPRVLANILGWNVTLKQACTRLRCSKCQSRKFQVENAFNRKPRGWKANPS*
Ga0079222_126861701	3300006755	Agricultural Soil	REIDPRTLANILGWNVTLKQACTRLRCSRCQSRSFDVEIAFHRKPRGWKTNPS*
Ga0079220_121118891	3300006806	Agricultural Soil	NILGWNVTLKQACTRLRCSKCQTRSFEVGIAFNRKPRGWRSNPS*
Ga0075420_1004211072	3300006853	Populus Rhizosphere	VICVTCRQCRHEREILPKTLANILGWNATLKQACTRLRCSKCQARSFDVGIVFDRKPRGWTSNPS*
Ga0079217_114050462	3300006876	Agricultural Soil	QAMPAAREMDPRTLANILGWNVTLKQACTRLRCSKCQARAFEVEIVFDRKPRGWKANPS*
Ga0079215_107560381	3300006894	Agricultural Soil	EREMDPRSLANILGWNATLKQACTRLRCSKCQARTIKVEIAFTRKPRGWKSNPS*
Ga0079219_101358713	3300006954	Agricultural Soil	CRRCQHEREMVPRSLANILGWNTTLKQACTRLRCSKCQSRDIKVEIAFDRKPRGWKANPS
Ga0079218_109787191	3300007004	Agricultural Soil	KLSDHSGSYVICVICLACQHQREMSPRSLANILGWNVTLKQACKRLRCSKCQARKFRVEVAFNRKPRGWRANPS*
Ga0079218_139467432	3300007004	Agricultural Soil	VACLQCKHEREMSPRTLANILGWNVTLKQACTRLRCSKCQSRKFRVEVAFNRKPRGWKSNPS*
Ga0111539_113690151	3300009094	Populus Rhizosphere	YVICVQCRQCQHDREIDPRTLANILGWNITLKQACTRLRCSKCQSRNFQVEVAFNRRPRGWKSNPS*
Ga0111539_134788612	3300009094	Populus Rhizosphere	YVICVQCRQCKHDREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS*
Ga0105242_116143172	3300009176	Miscanthus Rhizosphere	YGICVACRQCRHEREIEPRVLANILGWNATLKQACTRLRCSKCQSRKFQVEIAFNRKPRGWKANPS*
Ga0105242_128527011	3300009176	Miscanthus Rhizosphere	DPRTLANILGWNVTLRQACTRLRCSKCQARSFDVEVAFHRKPRGWRANPS*
Ga0114942_13621962	3300009527	Groundwater	MCRACRHAREIDPRTLANILGWNVTLKQASTRLRCSKCQARSFEVQIAFNRKPRGWRANP
Ga0105237_126689571	3300009545	Corn Rhizosphere	PRSLANILGWNVTLKQACTRLRCSRCQARSFEVKVAFNRKPRGWKSNPS*
Ga0105238_104807842	3300009551	Corn Rhizosphere	MDPRTLANILGWNVTLKQACTRLRCSQCQARQFQVEVAFNRKPRGWKSNPS*
Ga0105249_122558441	3300009553	Switchgrass Rhizosphere	SLANILGWNVTLTQACTRLRCSKCQSRKFRVEVAFNRKPRGWRANPS*
Ga0105252_101122551	3300009678	Soil	HTIQKLSDHSRSYVICVTCRNCKHEREMLPKTLANFLGWNVTLKQACTRLRCSKCQARSFSVEIAFNRKPRGWKANPS*
Ga0126379_129926482	3300010366	Tropical Forest Soil	SDHSGSYVICVRCHKCTHEREIDPRSLANVLGWNVTLKQACTRLRCSKCQGRDFRVEIVFNRKPRGWKANPS*
Ga0134127_130875923	3300010399	Terrestrial Soil	RKCRHQREMEPRALANILGWNTTLKQACTRLRCSKCEGRNFQVEVAFNRKPRGWKSNPS*
Ga0134121_101186502	3300010401	Terrestrial Soil	LPASAIDRLSDHSGAYVICVACRQCRHEREIEPRVLANILGWNVTLKQACTRLRCSKCQSRKFQVEVAFNRKPRGWKANPS*
Ga0134123_113725231	3300010403	Terrestrial Soil	QCRHEREIEPRVLANILGWNVTLKQACTRLRCSKCQSRKFQVEIAFNRKPRGWKANPS*
Ga0137451_10631051	3300011438	Soil	CVTCRQCQHEREMDPRSLANILGWNVTLKQACTRFRCSKCQSRAFKVEIAFDRKPRGWKANPS*
Ga0136634_104143532	3300012046	Polar Desert Sand	EIDPRSLANILGWNVTLKQACTRLRCSKCDARAVKVEVAFDRKPRGWKSNPS*
Ga0150985_1041423312	3300012212	Avena Fatua Rhizosphere	MTPQSLANILGWNVTLKQACTRLRCSKCQARSFEVQVAFNRKPRGWK
Ga0157294_102141852	3300012892	Soil	RHGREIDPRTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS*
Ga0157292_101327732	3300012900	Soil	PRTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS*
Ga0157289_101365481	3300012903	Soil	DPRSLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS*
Ga0157282_100479083	3300012904	Soil	LGWNVTLKQACTRLRCSKCHARRFEVEIAFNRKPRGWRANPS*
Ga0157297_103384633	3300012914	Soil	KQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS*
Ga0157310_103790251	3300012916	Soil	ANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS*
Ga0164241_100134718	3300012943	Soil	MNPRSLANILGWNVTLKQACTRFRCSKCQSRTVKVEIAFDRRPRGWKANPS*
Ga0164241_106809282	3300012943	Soil	MDPRSLANILGWNVTLKQACTRLRCSKCRSRTIKVEIAFDRKPRGWKANPS*
Ga0164301_106178222	3300012960	Soil	LANILGWNVTLTQACTRLRCSKCQARSFEVEIAFHRK
Ga0164308_113967641	3300012985	Soil	LANILGWNVTLEQACTRLRCSKCQGRNFNVEVAFNRKPRGWKSNPS*
Ga0157375_111697042	3300013308	Miscanthus Rhizosphere	AYVICVVCLACQHQREMAPRSLANILGWNVTLTQACTRLRCSKCQSRKFRVEVAFNRKPRGWRANPS*
Ga0163163_106751533	3300014325	Switchgrass Rhizosphere	CRQCRHGREIDPRSLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS
Ga0157376_125951082	3300014969	Miscanthus Rhizosphere	LANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRK
Ga0173480_103359682	3300015200	Soil	LANILGWNVTLTQACTRLRCSKCQSRKFRVEVAFNRKPRGWRANPS*
Ga0173478_101769333	3300015201	Soil	NVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWKSNPS*
Ga0184619_103821831	3300018061	Groundwater Sediment	MPLPASAIDKLGDHSGSYVICITCKTCRHDREIDPRTLANILGWNVTLKQACTRLRCSKCQARSFNVEVAFNRKPRGWKANPS
Ga0190272_120885331	3300018429	Soil	CRKCSHEREIDPRTLANILGWNVTLKQACTRLRCSKCQARSFAVEIAFNRKPRGWKANPS
Ga0190274_101587993	3300018476	Soil	MDPRSLANILGWNITLKQACTRLRCSKCQARAFKVEIAFDRKPRGWKANPS
Ga0190264_121806131	3300019377	Soil	LSDHSGCYVICVTCHQCRHEREIDPRTLANILGWNITLTQTCTRLRCSTCQARRFKVEIAFVRKPRGWKANPS
Ga0193752_100227910	3300020027	Soil	VICVKCRKCSHDREIDPRVLANILGWNVTLKQACTRLRCSKCESRSFAVEIAFNRKPRGWKANPS
Ga0193753_1000468611	3300020034	Soil	MDPRTLANILGWNVTLKQACTRLRCSKCQSRAFKVEVAFDRKPRGWKANPS
Ga0247770_12569612	3300022891	Plant Litter	VICVKCRQCQHEREMAPRSLANILGWNATLKQACTRLRCSKCESRRFDVEIAFNRKPRGWKANPS
Ga0247774_11114441	3300022903	Plant Litter	NILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWRSNPS
Ga0247790_102057731	3300022915	Soil	SYVICVTCRQCRHGREIDPRTLANILGWNVTLKQACTRLRCSKCHARRFEVEIAFNRKPRGWRANPS
Ga0247777_10254033	3300022917	Plant Litter	CRQCKHDREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWRSNPS
Ga0247800_11344761	3300023263	Soil	NVTLKQACTRLRCSKCQARSFDVEVAFNRKPRGWRANPS
Ga0247765_11359291	3300023268	Plant Litter	YEICVKCRQCRHEREMVPSSLANILGWNVTLKQACTRLRCSQCQARSFDVQIAFNRKPRGWRSNPS
Ga0207643_106877371	3300025908	Miscanthus Rhizosphere	EIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS
Ga0207649_100228766	3300025920	Corn Rhizosphere	MLANILGWNVTLQQACTRLRCSKCQARNFRVEVAFNRKPRGWKSNPS
Ga0207681_101589523	3300025923	Switchgrass Rhizosphere	QCRHGREIDPRTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS
Ga0207681_112979301	3300025923	Switchgrass Rhizosphere	RTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS
Ga0207659_107769751	3300025926	Miscanthus Rhizosphere	GFYVICVTCRQCRHGREIDPRSLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFHRKPRGWRANPS
Ga0207659_107789462	3300025926	Miscanthus Rhizosphere	MAPRSLANILGWNVTLTQACTRLRCSKCQSRKFRVEVAFNRRPRGWRANPS
Ga0207644_118419891	3300025931	Switchgrass Rhizosphere	ISVTCHKCRHQREMEPRVLANILGWNVTLKQACTRLRCSKCQGRNFQVEVAFNRKPRGWKSNPS
Ga0207704_104758582	3300025938	Miscanthus Rhizosphere	LANILGWNVTLMQACTRLRCSKCQSRKFQVEIAFNRKPRGWKANPS
Ga0207704_106320953	3300025938	Miscanthus Rhizosphere	DREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFNRKPRGWRSNPS
Ga0207689_102381112	3300025942	Miscanthus Rhizosphere	VICVKCRQCSHEREMDPRTLANILGWNVTLKQACTRLRCSKCESRSVAVEIAFNRKPRGWKANPS
Ga0207679_106380733	3300025945	Corn Rhizosphere	KHDREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS
Ga0207679_111687852	3300025945	Corn Rhizosphere	VSCKKCRHEREMEPRALANILGWNVTLKQACTRLRCSKCQGRDFQVEVAFNRKPRGWKSNPS
Ga0207668_108596851	3300025972	Switchgrass Rhizosphere	TCRKCRHGREIDPRTLANILGWNVTLRQACTRLRCSKCQARNFQVEVAFNRKPRGWRSNP
Ga0207677_106204993	3300026023	Miscanthus Rhizosphere	TMRAMPLPASAIDRLSDHSGAYVICVTCRKCRHQREMEPRALANILGWNTTLKQACTRLRCSKCEGRNFQVEVAFNRKPRGWKSNPS
Ga0207678_104099553	3300026067	Corn Rhizosphere	LGWNITLKQACTRLRCSKCQARNFLVEVAFNRKPRGWKSNPS
Ga0207648_110622522	3300026089	Miscanthus Rhizosphere	IEPRVLANILGWNVTLKQACTRLRCSKCQSRKFQVEIAFNRKPRGWKANPS
Ga0209486_105056942	3300027886	Agricultural Soil	ILGWNTTLKQACTRLRCSQCQARQIKVEIAFNRKPRGWKSNPS
Ga0307503_101937702	3300028802	Soil	MDPRALANILGWNVTLKQACTRLRCSKCQSRSFQVEIAFDRKPRGWKANPS
Ga0302323_1025657341	3300031232	Fen	HEREIEPRVLANILGWNVTLRQACTRLRCSKCEARKFDVEIVFDRKPRGWKSNPS
Ga0307506_102103781	3300031366	Soil	LANILGWNVTLKQACTRLRCSKCEARSFEVQIAFDRKPRGWRANPS
Ga0307513_100171228	3300031456	Ectomycorrhiza	VICVKCRKCSHEREIDPRVLANILGWNVTLKQACTRLRCSTCESRSFAVEIAFNRKPRGWKANPS
Ga0307513_100284155	3300031456	Ectomycorrhiza	MPLPASSIDKLIDHSGSYVICVKCRKCSHEREIEPRTLANILGWNVTLKQACTRLRCSKCQSRTFQVEIAFNRKPRGWKANPS
Ga0310887_103082991	3300031547	Soil	VTLKQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS
Ga0310886_104811251	3300031562	Soil	HSGSYVICVTCQKCRHGREIDPRTLANILGWNVTLKQACTRLRCSKCQARSFEVEIAFNRKPRGWRANPS
Ga0310813_106588413	3300031716	Soil	VICVQCRQCKHDREIDPRTLANILGWNVTLKQACTRLRCSKCQARNFQVEVAFDRKPRGWKSNPS
Ga0310901_102338421	3300031940	Soil	CQHQREMAPRSLANILGWNVTLTQACTRLRCSKCQSRKFRVEVVFNRKPRGWRANPS
Ga0307409_1004728091	3300031995	Rhizosphere	LAHIVGWNATLEQACRRLRCSRCQAREYRVEVAFDRKPRGWRANPS
Ga0307416_1000676671	3300032002	Rhizosphere	ILGWNITLKQACTRLRCSKCAARNFQVEIAFHRRPRGWKSNPS
Ga0307416_1035987921	3300032002	Rhizosphere	WSATLRQACSRLRCSQCQARSFKVEIAFDRKPRGWSSNPS
Ga0310895_100192334	3300032122	Soil	ICVVCLACQHQREMAPRSLANILGWNVTLKQACTRLRCSKCQSRKFRVEVVFNRKPRGWRANPS
Ga0307415_1000097583	3300032126	Rhizosphere	MTPRSLANILGWNITLKQACTRLRCSKCAARNFQVEIAFHRRPRGWKSNPS
Ga0315910_111165011	3300032144	Soil	NILGWYVTLKQACTRLRCSKCQSRRFQVEIAFNRKPRGWKANPS
Ga0315912_1000100421	3300032157	Soil	MDAEFCGRKNRGMPLPASAVDKLSDHSGSYVICVTCLQCKHEREMVPRTLANILGWDATLKQACTRLRCSRCQSRKFRVEVAFNRKPRGWRANPS
Ga0315912_101646403	3300032157	Soil	MPLPASTVDKLSDHAGSYVICVTCLQCKHEREMVPRTLANILGWDATLKQACTRLRCSRCQSRKFSVEVAFNRKPRGWRANPS
Ga0315912_107217903	3300032157	Soil	KLSDHSGIYVICVQCRQCKHDREIDPRTLANILGWNVTLRQACTRLRCSKCQARNFQVEVAFNRKPRGWKSNPS
Ga0310896_108167982	3300032211	Soil	HSGAYVICVICRKCMHQREMDPRTLANILGWNVTLKQACTRLRCSKCQARSFQVEIAFNRKPRGWRANPS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080225

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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