Metagenome Family F080214

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080214
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	66 residues
Representative Sequence	MNAVNAGSRDPVATFGMARKESRKSILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH
Number of Associated Samples	104
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.75 %
% of genes near scaffold ends (potentially truncated)	28.70 %
% of genes from short scaffolds (< 2000 bps)	68.70 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.435 % of family members)
Environment Ontology (ENVO)	Unclassified (32.174 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.92% β-sheet: 0.00% Coil/Unstructured: 43.08%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF04586	Peptidase_S78	20.87
PF07332	Phage_holin_3_6	5.22
PF05239	PRC	2.61
PF04860	Phage_portal	1.74
PF00535	Glycos_transf_2	0.87
PF04392	ABC_sub_bind	0.87
PF11752	DUF3309	0.87
PF02735	Ku	0.87
PF02668	TauD	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	20.87
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.87
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.17 %
Unclassified	root	N/A	27.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.17 %
Unclassified	root	N/A	27.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.17 %
Unclassified	root	N/A	27.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.30 %
Unclassified	root	N/A	27.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.00 %
Unclassified	root	N/A	27.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	56.52 %
Unclassified	root	N/A	27.83 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.87 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	50.43 %
Unclassified	root	N/A	27.83 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	34.78 %
Unclassified	root	N/A	27.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11.30 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	34.78 %
Unclassified	root	N/A	27.83 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.87 %
unclassified Nitrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	34.78 %
Unclassified	root	N/A	27.83 %
Nitrobacter sp. Nb-311A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	0.87 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11383498	Not Available	625	Open in IMG/M
3300000953\|JGI11615J12901_10464466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300002128\|JGI24036J26619_10000030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25308	Open in IMG/M
3300004009\|Ga0055437_10193250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	649	Open in IMG/M
3300004019\|Ga0055439_10119889	Not Available	796	Open in IMG/M
3300004114\|Ga0062593_100037177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2866	Open in IMG/M
3300004114\|Ga0062593_100130192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1858	Open in IMG/M
3300004114\|Ga0062593_103077905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	534	Open in IMG/M
3300004145\|Ga0055489_10080760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	918	Open in IMG/M
3300004156\|Ga0062589_101331565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	696	Open in IMG/M
3300004157\|Ga0062590_100308433	Not Available	1237	Open in IMG/M
3300004157\|Ga0062590_101427954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	690	Open in IMG/M
3300004463\|Ga0063356_100505589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1600	Open in IMG/M
3300004479\|Ga0062595_100190358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → unclassified Nitrobacter → Nitrobacter sp. Nb-311A	1255	Open in IMG/M
3300005103\|Ga0066813_1011418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	556	Open in IMG/M
3300005159\|Ga0066808_1016512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	702	Open in IMG/M
3300005162\|Ga0066814_10008554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1202	Open in IMG/M
3300005163\|Ga0066823_10060252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	707	Open in IMG/M
3300005164\|Ga0066815_10010303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1144	Open in IMG/M
3300005169\|Ga0066810_10028698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	980	Open in IMG/M
3300005276\|Ga0065717_1000462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1103	Open in IMG/M
3300005290\|Ga0065712_10012996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2017	Open in IMG/M
3300005327\|Ga0070658_11535143	Not Available	577	Open in IMG/M
3300005329\|Ga0070683_100709035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	964	Open in IMG/M
3300005333\|Ga0070677_10463461	Not Available	680	Open in IMG/M
3300005335\|Ga0070666_10657525	Not Available	767	Open in IMG/M
3300005343\|Ga0070687_100573337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	771	Open in IMG/M
3300005345\|Ga0070692_11381606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	508	Open in IMG/M
3300005354\|Ga0070675_100090571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2562	Open in IMG/M
3300005356\|Ga0070674_100628855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	910	Open in IMG/M
3300005366\|Ga0070659_100695530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	879	Open in IMG/M
3300005440\|Ga0070705_100049280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2445	Open in IMG/M
3300005458\|Ga0070681_10617126	Not Available	999	Open in IMG/M
3300005468\|Ga0070707_101039204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	785	Open in IMG/M
3300005530\|Ga0070679_102005521	Not Available	528	Open in IMG/M
3300005547\|Ga0070693_100000362	All Organisms → cellular organisms → Bacteria → Proteobacteria	20585	Open in IMG/M
3300005615\|Ga0070702_101639713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	533	Open in IMG/M
3300005764\|Ga0066903_108464941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	525	Open in IMG/M
3300006196\|Ga0075422_10333743	Not Available	657	Open in IMG/M
3300006196\|Ga0075422_10494793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	554	Open in IMG/M
3300006358\|Ga0068871_100004402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9789	Open in IMG/M
3300006914\|Ga0075436_101384908	Not Available	533	Open in IMG/M
3300009098\|Ga0105245_11831520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	660	Open in IMG/M
3300009545\|Ga0105237_10143897	Not Available	2378	Open in IMG/M
3300009553\|Ga0105249_10003030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14492	Open in IMG/M
3300009553\|Ga0105249_10298036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1616	Open in IMG/M
3300009553\|Ga0105249_13562800	Not Available	502	Open in IMG/M
3300010371\|Ga0134125_11746993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	677	Open in IMG/M
3300010373\|Ga0134128_10198787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2257	Open in IMG/M
3300010399\|Ga0134127_11199045	Not Available	826	Open in IMG/M
3300012507\|Ga0157342_1059436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	557	Open in IMG/M
3300012515\|Ga0157338_1003145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1348	Open in IMG/M
3300012891\|Ga0157305_10011321	All Organisms → cellular organisms → Bacteria → Proteobacteria	1434	Open in IMG/M
3300012906\|Ga0157295_10001367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3353	Open in IMG/M
3300012915\|Ga0157302_10367552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	582	Open in IMG/M
3300012916\|Ga0157310_10015377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1913	Open in IMG/M
3300012961\|Ga0164302_10041718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2206	Open in IMG/M
3300013096\|Ga0157307_1034047	Not Available	898	Open in IMG/M
3300013100\|Ga0157373_10294855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1150	Open in IMG/M
3300013105\|Ga0157369_11688134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	644	Open in IMG/M
3300014299\|Ga0075303_1010835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1211	Open in IMG/M
3300014308\|Ga0075354_1005102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1715	Open in IMG/M
3300014320\|Ga0075342_1001535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4412	Open in IMG/M
3300015371\|Ga0132258_10750397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2458	Open in IMG/M
3300015371\|Ga0132258_10938758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2185	Open in IMG/M
3300015373\|Ga0132257_100137288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2854	Open in IMG/M
3300015373\|Ga0132257_100687157	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300015373\|Ga0132257_100784285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1189	Open in IMG/M
3300017792\|Ga0163161_11306949	Not Available	631	Open in IMG/M
3300019356\|Ga0173481_10001273	All Organisms → cellular organisms → Bacteria → Proteobacteria	6011	Open in IMG/M
3300019356\|Ga0173481_10009354	All Organisms → cellular organisms → Bacteria → Proteobacteria	2729	Open in IMG/M
3300019361\|Ga0173482_10000021	All Organisms → cellular organisms → Bacteria → Proteobacteria	24684	Open in IMG/M
3300021560\|Ga0126371_13299085	Not Available	545	Open in IMG/M
3300022883\|Ga0247786_1000007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25621	Open in IMG/M
3300023067\|Ga0247743_1000219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4991	Open in IMG/M
3300023266\|Ga0247789_1000560	All Organisms → cellular organisms → Bacteria → Proteobacteria	6431	Open in IMG/M
3300025315\|Ga0207697_10071872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1450	Open in IMG/M
3300025538\|Ga0210132_1001853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2595	Open in IMG/M
3300025551\|Ga0210131_1089034	Not Available	532	Open in IMG/M
3300025560\|Ga0210108_1131617	Not Available	507	Open in IMG/M
3300025900\|Ga0207710_10191243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1008	Open in IMG/M
3300025904\|Ga0207647_10007983	All Organisms → cellular organisms → Bacteria → Proteobacteria	7609	Open in IMG/M
3300025917\|Ga0207660_11022298	Not Available	674	Open in IMG/M
3300025918\|Ga0207662_10319724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1036	Open in IMG/M
3300025937\|Ga0207669_10485955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	985	Open in IMG/M
3300025962\|Ga0210070_1006015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1289	Open in IMG/M
3300026452\|Ga0256821_1002094	Not Available	1719	Open in IMG/M
3300026792\|Ga0207499_103714	Not Available	539	Open in IMG/M
3300026822\|Ga0207498_105969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	573	Open in IMG/M
3300026929\|Ga0207461_1008823	Not Available	575	Open in IMG/M
3300026960\|Ga0207582_1028966	Not Available	531	Open in IMG/M
3300027401\|Ga0208637_1018872	Not Available	747	Open in IMG/M
3300027682\|Ga0209971_1008208	All Organisms → cellular organisms → Bacteria → Proteobacteria	2476	Open in IMG/M
3300027876\|Ga0209974_10027240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1890	Open in IMG/M
3300027907\|Ga0207428_10272402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1258	Open in IMG/M
3300027992\|Ga0247750_1004915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1082	Open in IMG/M
3300027993\|Ga0247749_1028200	Not Available	628	Open in IMG/M
3300028809\|Ga0247824_10809605	Not Available	579	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1008965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2006	Open in IMG/M
3300031226\|Ga0307497_10057210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1390	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1115806	Not Available	658	Open in IMG/M
3300031716\|Ga0310813_10002265	All Organisms → cellular organisms → Bacteria → Proteobacteria	11699	Open in IMG/M
3300031858\|Ga0310892_10166231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1296	Open in IMG/M
3300031913\|Ga0310891_10008191	All Organisms → cellular organisms → Bacteria → Proteobacteria	2334	Open in IMG/M
3300031943\|Ga0310885_10432697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	706	Open in IMG/M
3300032205\|Ga0307472_101403508	Not Available	677	Open in IMG/M
3300032211\|Ga0310896_10164470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1064	Open in IMG/M
3300033004\|Ga0335084_10111076	All Organisms → cellular organisms → Bacteria → Proteobacteria	2850	Open in IMG/M
3300033412\|Ga0310810_10030492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6563	Open in IMG/M
3300034817\|Ga0373948_0001437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	3303	Open in IMG/M
3300034820\|Ga0373959_0003276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	2574	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.22%
Host-Associated	Host-Associated	34.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.26%
Plants	Host-Associated → Plants	34.78%
Aquatic	Environmental → Aquatic	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.65%
Marine	Environmental → Aquatic → Marine	6.09%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.61%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Sand	Environmental → Terrestrial → Soil → Sand	1.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.09%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	9.57%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.48%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.48%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.74%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005276	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014299	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025962	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026452	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU4	Environmental	Open in IMG/M
3300026792	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3-12 (SPAdes)	Environmental	Open in IMG/M
3300026822	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026929	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3w-12 (SPAdes)	Environmental	Open in IMG/M
3300026960	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300027993	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_113834982	3300000891	Soil	MNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHN
JGI11615J12901_104644662	3300000953	Soil	MNAVNAGSRDPVATFGMARKQSRKSILLRFMEALKESRRREARRVIATYAHLLANRDNRKEDNQH*
JGI24036J26619_1000003034	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHXTLDVDDRX*
Ga0055437_101932501	3300004009	Natural And Restored Wetlands	GSRDPVATFGMARKKSRNSILLRFTDALKEPRRRQARRVIATYAHLLADRDAPNDDNHH*
Ga0055439_101198892	3300004019	Natural And Restored Wetlands	MLSMNADAGSRDPVATFGMARKKSRNSILLRFTDALKEPRRRQARRVIATYAHLLADRDAPNDDNHH*
Ga0062593_1000371778	3300004114	Soil	MAVNADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDGPDDNNRH*
Ga0062593_1001301923	3300004114	Soil	MLFMNADAGSRDPVATFGMARKKSRKSILLRFTEALKESRRRQARRVIATYAHLLADRDTPDDDNHH*
Ga0062593_1030779052	3300004114	Soil	MNAVNAGSRDPVATFGMARKESRKSILLRFMEALKESRRRKARRVIATYAHLLADRDTLDGDKRH*
Ga0055489_100807602	3300004145	Natural And Restored Wetlands	MNADVGSRDPVATFGMARKKSRNSILLRFTDALKEPRRRQARRIIATYAHLLADRDAPNDDNHH*
Ga0062589_1013315652	3300004156	Soil	MNAVKAGSRDPVATFGMARKESRKSILLRFMEALKESRRRKARRVIATYAHLLADRDTLDGDKRH*
Ga0062590_1003084334	3300004157	Soil	MAVNADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDSPDDNNRH*
Ga0062590_1014279541	3300004157	Soil	MNADAGSRDPVATFGMARKKSRKSILLRFTEALKESRRRQARRVIATYAHLLADRDTPDDDNHH*
Ga0063356_1005055892	3300004463	Arabidopsis Thaliana Rhizosphere	MTADAGSRDPVATFGMARKKSRKSILLRFTEALKESRRRQAQRVIATYAHLLADRDTPDDNNHH*
Ga0062595_1001903582	3300004479	Soil	MNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH*
Ga0066813_10114182	3300005103	Soil	MNAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVITTYAHLLADRDTLDSDNQH*
Ga0066808_10165122	3300005159	Soil	MKAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVITTYAHLLADRDTLDSDNQH*
Ga0066814_100085542	3300005162	Soil	MNAVNAGSRDPVATFGMARKESRKSILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0066823_100602522	3300005163	Soil	MNAANAGPRDPVAMFGMARKESRKSILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0066815_100103033	3300005164	Soil	MKAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVIVTYAHLLADRDTLDNDNQH*
Ga0066810_100286982	3300005169	Soil	MNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0065717_10004622	3300005276	Arabidopsis Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0065712_100129962	3300005290	Miscanthus Rhizosphere	MNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH*
Ga0070658_115351432	3300005327	Corn Rhizosphere	HTAIIPSQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH*
Ga0070683_1007090351	3300005329	Corn Rhizosphere	RSVPSQRMLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0070677_104634611	3300005333	Miscanthus Rhizosphere	MNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRD
Ga0070666_106575252	3300005335	Switchgrass Rhizosphere	MLFMAVNADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDSPDDNNRH*
Ga0070687_1005733372	3300005343	Switchgrass Rhizosphere	ADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDSPDDNNRH
Ga0070692_113816061	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNADAGSRDPVATFGMARKKSRKSILLRFTEALKESRRRQARRVIATYAHLLADRDTPDDDN
Ga0070675_1000905714	3300005354	Miscanthus Rhizosphere	MNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0070674_1006288551	3300005356	Miscanthus Rhizosphere	PSQRMLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0070659_1006955301	3300005366	Corn Rhizosphere	RSVPSQRMLFMNADAGSRDPVATFGMARKKSRKSILLRFTEALKESRRRQARRVIATYAHLLADRDTPDDDNHH*
Ga0070705_1000492805	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH*
Ga0070681_106171261	3300005458	Corn Rhizosphere	MGAVNAGRNSVTTLGITRKKSGKSLFLRFMEALKESRRREARRVIANNAHLLANRDTPDSDNQT*
Ga0070707_1010392043	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RMLFMNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH*
Ga0070679_1020055212	3300005530	Corn Rhizosphere	MNAVKAGSRDPVATFGMARKESRKSILLRFMEALKESRRREARRVIATYAHLLADRDTLDGDKRH*
Ga0070693_10000036222	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHDTLDVDDRH*
Ga0070702_1016397131	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RSVPSQRMLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEELKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0066903_1084649412	3300005764	Tropical Forest Soil	MLAMKAVNAGSRDSIATFGMVRTVAIKSFLSGFMEALRQSRRREARRIIATYAHLLDDRKTLDNDDQH*
Ga0075422_103337431	3300006196	Populus Rhizosphere	PSQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH*
Ga0075422_104947932	3300006196	Populus Rhizosphere	FMNAVNAGSRDPVATFGMARKQSRKSILLRFIEALKESRRREARRVIATYAHLLANRDNRKEDNQH*
Ga0068871_10000440216	3300006358	Miscanthus Rhizosphere	THIAIIPSQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH*
Ga0075436_1013849082	3300006914	Populus Rhizosphere	MPYMGAVNAGRNSVTTLGITRKKSGKSLFLRFMEALKESRRREARRVIANNAHLLANRDTPDSDNQT*
Ga0105245_118315202	3300009098	Miscanthus Rhizosphere	DPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0105237_101438972	3300009545	Corn Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH*
Ga0105249_100030308	3300009553	Switchgrass Rhizosphere	MLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH*
Ga0105249_102980362	3300009553	Switchgrass Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0105249_135628001	3300009553	Switchgrass Rhizosphere	MFFMNAVKAGSRDPVATFGMARKESRKSILLRFMEALKESRRRKARRVIATYAHLLADRDTLDGDKRH*
Ga0134125_117469931	3300010371	Terrestrial Soil	MLFMKAVNADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDSPDDNNRH*
Ga0134128_101987874	3300010373	Terrestrial Soil	MLFMNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0134127_111990451	3300010399	Terrestrial Soil	MFFMNAVKAGSRDPVATFGMARKESRKSILLRFMEALKESRRREARRVIATYAHLLADRDTLDGDKRH*
Ga0134123_107016911	3300010403	Terrestrial Soil	MLFMNAANDGPRVPVAMFGMGRKESRRSILLRFIEALKESRRREAQRVIATYA
Ga0157319_10436151	3300012497	Arabidopsis Rhizosphere	NAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHFG*
Ga0157342_10594361	3300012507	Arabidopsis Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKSVLLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH*
Ga0157338_10031453	3300012515	Arabidopsis Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYALLLADRDTRDDDNQH*
Ga0157305_100113214	3300012891	Soil	SQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRREARRVIAINAHLLADHNTLDVDDRH*
Ga0157295_100013676	3300012906	Soil	MLFMNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNHH*
Ga0157302_103675521	3300012915	Soil	NAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0157310_100153774	3300012916	Soil	NAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH*
Ga0164302_100417184	3300012961	Soil	MLFMNAANAGPRDPVAMFGMGRKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0157307_10340471	3300013096	Soil	MLFMNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDNNQH*
Ga0157373_102948552	3300013100	Corn Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFMEALKESRRREARRVIATYAHLLADRDTLDGDKRH*
Ga0157369_116881341	3300013105	Corn Rhizosphere	NAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH*
Ga0075303_10108352	3300014299	Natural And Restored Wetlands	MLSMNADAGSRDPVATFGMARKKSRNSILLRFTDALKEPRRRQARRIIATYAHLLADRDAPNDDNHH*
Ga0075354_10051022	3300014308	Natural And Restored Wetlands	MLSMNADAGSRDPVATFGMAQKKSRNSILLRFTKALKELGRRQARRVIATYAHLLAERDAPNDDNHH*
Ga0075342_10015358	3300014320	Natural And Restored Wetlands	MNADAGSRDPVATFGMARKKSRNSILLRFTDALKEPRRRQARRVIATYVHLLADRDAPNDDNHH*
Ga0132258_107503971	3300015371	Arabidopsis Rhizosphere	LFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH*
Ga0132258_109387583	3300015371	Arabidopsis Rhizosphere	MLFMKAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVITTYAHLLADRDTLESDNQH*
Ga0132257_1001372886	3300015373	Arabidopsis Rhizosphere	MFFMKAVNADSRDPAATIGMARKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDSPEDNNRH*
Ga0132257_1006871573	3300015373	Arabidopsis Rhizosphere	NAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH*
Ga0132257_1007842853	3300015373	Arabidopsis Rhizosphere	MLFMKAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVITTYAHLLADRDTLDSDNQH*
Ga0132257_1024413151	3300015373	Arabidopsis Rhizosphere	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHFG*
Ga0163161_113069492	3300017792	Switchgrass Rhizosphere	MNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDN
Ga0173481_100012734	3300019356	Soil	MNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH
Ga0173481_100093545	3300019356	Soil	MNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0173482_1000002111	3300019361	Soil	MNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH
Ga0126371_132990851	3300021560	Tropical Forest Soil	MGAVNAGRNSVTTLGITRKKSGKSLFLRFMEALKESRRREARRVIANNAHLLANRDTPDSDNQT
Ga0247786_100000710	3300022883	Soil	MNAVNAGSRDPVATFGMARDESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0247743_10002194	3300023067	Soil	MNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH
Ga0247789_100056014	3300023266	Soil	FMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0207697_100718722	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MAVNADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYVYLLADRDGPDDNNRH
Ga0210132_10018533	3300025538	Natural And Restored Wetlands	MNADAGSRDPVATFGMARKKSRNSILLRFTDALKEPRRRQARRVIATYAHLLADRDAPNDDNHH
Ga0210131_10890342	3300025551	Natural And Restored Wetlands	MLSMNADAGSRDPVATFGMARKKSRNSILLRFTDALKEPRRRQARRIIATYAHLLADRDAPNDDNHH
Ga0210108_11316171	3300025560	Natural And Restored Wetlands	MLSMNADAGSRDPVATSGMARKKSRNSILLRFTDALKEPRRRQARRVIATYAHLLADRDAPNDDNHH
Ga0207710_101912431	3300025900	Switchgrass Rhizosphere	MAVNADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDSPDDNNRH
Ga0207647_100079836	3300025904	Corn Rhizosphere	MNAANAGPRDPVAMFGMARKESRKSILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH
Ga0207660_110222982	3300025917	Corn Rhizosphere	MNAVKAGSRDPVATFGMARKESRKSILLRFMEALKESRRREARRVIATYAHLLADRDTLDGDKRH
Ga0207662_103197242	3300025918	Switchgrass Rhizosphere	VAVNADSRDPAATIGMAQKKSRRSFFGRFMDALKDSRRREARRVIATYAYLLADRDSPDDNNRH
Ga0207669_104859554	3300025937	Miscanthus Rhizosphere	RSVPSQRMLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH
Ga0210070_10060153	3300025962	Natural And Restored Wetlands	MNADAGSRDPVATFGMAQKKSRNSILLRFTKALKELGRRQARRVIATYAHLLAERDAPNDDNHH
Ga0256821_10020942	3300026452	Sediment	MNANVGSRDPVATFGMARKKSRNSILLRFTEALKESRRRQARRVIATYAHLLADRDAPDDDNHR
Ga0207499_1037142	3300026792	Soil	AVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0207498_1059692	3300026822	Soil	APLRSVPSQRMLFMNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH
Ga0207461_10088232	3300026929	Soil	MNAVNAGSHDPVATFGMARNESRKSFLLRFMEALKESRRREAQRVIATYAHLLADRDTRD
Ga0207582_10289661	3300026960	Soil	MLFMNAANAGPRDPVAMFGMARKESRKPILLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0208637_10188722	3300027401	Soil	MKAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVITTYAHLLADRDTLDSDNQH
Ga0209970_10160803	3300027614	Arabidopsis Thaliana Rhizosphere	THIAIIPSQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0209971_10082083	3300027682	Arabidopsis Thaliana Rhizosphere	MNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAYLLADHNTLDVDDRH
Ga0209974_100272403	3300027876	Arabidopsis Thaliana Rhizosphere	MNADAGSRDPVATFGMARKKSRKSILLRFMEALKESRRRQTRRVIATYAHLLADRDTLDDDNHH
Ga0207428_102724022	3300027907	Populus Rhizosphere	MNAVNAGSRDPVATFGMARKQSRKSILLRFIEALKESRRREARRVIATYAHLLANRDNRKEDNQH
Ga0247750_10049151	3300027992	Soil	IIPSQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0247749_10282002	3300027993	Soil	IPSQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0247824_108096052	3300028809	Soil	MLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
(restricted) Ga0255311_10089655	3300031150	Sandy Soil	MNAANAGSRDPVAIFGIARKESRKSILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH
Ga0307497_100572103	3300031226	Soil	MNAANAGPRDPVAMFGMARKQSRKSILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH
(restricted) Ga0255312_11158062	3300031248	Sandy Soil	MLFMNAANAGSRDPVAIFGIARKESRKSILLRFMEALKESRRREARRVIATYAHLLADRDTRDDDNQH
Ga0310813_1000226516	3300031716	Soil	MTADAGSRDPVATFGMARKKSRKSILLRFTEALKESRRRQAQRVIATYAHLLADRDTPDDNNHH
Ga0310892_101662313	3300031858	Soil	MNAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVITTYAHLLADRDTLDSDNQH
Ga0310891_100081911	3300031913	Soil	IAIIPSQRMLFMNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHNTLDVDDRH
Ga0310885_104326972	3300031943	Soil	MLFMNAVNAGSRDPVATFGTARKESRKSILLRFMEALKESRRREARRVITTYAHLLADRDTLDSDNQH
Ga0307472_1014035081	3300032205	Hardwood Forest Soil	MNAVNAGSRDPVATFGMARNESRKSFLLRFMEALKESRRSEARRVIAINAHLLADHDTLDVDDRH
Ga0310896_101644703	3300032211	Soil	MKAVNAGSRDPVATFGTARKESRKLILLRFMEALKESRRREARRVITTYAHLLADRDTLDSDNQH
Ga0335084_101110763	3300033004	Soil	MKADAGSRDPVATFGMARKKSHKSILLRFTEALKESRRRQARRVIATYAHLLAARDTPDDDNHH
Ga0310810_100304921	3300033412	Soil	MSFMTADAGSRDPVATFGMARKKSRKSILLRFTEALKESRRRQAQRVIATYAHLLADRDTPDDNNHH
Ga0373948_0001437_1443_1649	3300034817	Rhizosphere Soil	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFMEALKESRRREAQRVIATYAHLLADRDTRDDDNQH
Ga0373959_0003276_1314_1520	3300034820	Rhizosphere Soil	MLFMNAANAGPRDPVAMFGMARKESRKSILLRFIEALKESRRREAQRVIATYAHLLADRDTRDDDNQH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters