Metagenome / Metatranscriptome Family F080191

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	80 residues
Representative Sequence	MQDVRWPLLKRLLLEDGWTWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN
Number of Associated Samples	97
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.78 %
% of genes near scaffold ends (potentially truncated)	24.35 %
% of genes from short scaffolds (< 2000 bps)	83.48 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.304 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.565 % of family members)
Environment Ontology (ENVO)	Unclassified (33.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.348 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.74% β-sheet: 8.33% Coil/Unstructured: 50.93%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.2: Ribonucleotide reductase-like	d2uw1a_	2uw1	0.63004
a.25.1.4: YciF-like	d2gyqa1	2gyq	0.6136
e.41.1.1: Adenylylcyclase toxin (the edema factor)	d1k8ta_	1k8t	0.61046
a.208.1.0: automated matches	d3pnlb1	3pnl	0.60969
e.25.1.1: Sec1/munc18-like (SM) proteins	d3c98a_	3c98	0.60921

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01817	CM_2	19.13
PF00069	Pkinase	12.17
PF02738	MoCoBD_1	9.57
PF07714	PK_Tyr_Ser-Thr	6.96
PF04357	TamB	3.48
PF08240	ADH_N	2.61
PF06897	DUF1269	1.74
PF01842	ACT	1.74
PF08241	Methyltransf_11	0.87
PF04228	Zn_peptidase	0.87
PF01380	SIS	0.87
PF01471	PG_binding_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	76.52
COG1605	Chorismate mutase	Amino acid transport and metabolism [E]	19.13
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	3.48
COG4803	Uncharacterized membrane protein	Function unknown [S]	1.74
COG2321	Predicted metalloprotease	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.83 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	86.09 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	86.09 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	30.43 %
Unclassified	root	N/A	8.70 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	5.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.22 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.22 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.22 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.87 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.22 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	0.87 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0833595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	610	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2437112	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2271	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2438618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	952	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2439048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1294	Open in IMG/M
3300000890\|JGI11643J12802_11478719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1432	Open in IMG/M
3300000956\|JGI10216J12902_107146999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	549	Open in IMG/M
3300003313\|P32013IDBA_1063478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	909	Open in IMG/M
3300003321\|soilH1_10168721	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2212	Open in IMG/M
3300003465\|P52013CM_1019621	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2315	Open in IMG/M
3300003992\|Ga0055470_10137343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	633	Open in IMG/M
3300004015\|Ga0055462_10222975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	603	Open in IMG/M
3300004114\|Ga0062593_100058702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2458	Open in IMG/M
3300004114\|Ga0062593_100086488	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2147	Open in IMG/M
3300004156\|Ga0062589_102880423	Not Available	502	Open in IMG/M
3300004643\|Ga0062591_101953314	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300004803\|Ga0058862_11750544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	528	Open in IMG/M
3300004803\|Ga0058862_11888626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	576	Open in IMG/M
3300005093\|Ga0062594_102153428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	601	Open in IMG/M
3300005258\|Ga0074071_1005939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3340	Open in IMG/M
3300005258\|Ga0074071_1019035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1506	Open in IMG/M
3300005327\|Ga0070658_11370805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	614	Open in IMG/M
3300005329\|Ga0070683_100093374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2827	Open in IMG/M
3300005329\|Ga0070683_100954129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	823	Open in IMG/M
3300005331\|Ga0070670_101629055	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	593	Open in IMG/M
3300005340\|Ga0070689_100108432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2206	Open in IMG/M
3300005356\|Ga0070674_100253186	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1384	Open in IMG/M
3300005356\|Ga0070674_101514926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	603	Open in IMG/M
3300005435\|Ga0070714_102426802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	509	Open in IMG/M
3300005437\|Ga0070710_10449508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	873	Open in IMG/M
3300005440\|Ga0070705_101089023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	653	Open in IMG/M
3300005444\|Ga0070694_101899225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	508	Open in IMG/M
3300005456\|Ga0070678_101058094	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	748	Open in IMG/M
3300005471\|Ga0070698_100000234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	55039	Open in IMG/M
3300005471\|Ga0070698_102170128	Not Available	509	Open in IMG/M
3300005526\|Ga0073909_10400692	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	646	Open in IMG/M
3300005530\|Ga0070679_101679198	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	583	Open in IMG/M
3300005535\|Ga0070684_102234685	Not Available	516	Open in IMG/M
3300005546\|Ga0070696_101555868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	567	Open in IMG/M
3300005617\|Ga0068859_102141873	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	617	Open in IMG/M
3300005617\|Ga0068859_102237454	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	603	Open in IMG/M
3300005618\|Ga0068864_100495845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1174	Open in IMG/M
3300005764\|Ga0066903_101755137	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1184	Open in IMG/M
3300005893\|Ga0075278_1078943	Not Available	523	Open in IMG/M
3300005904\|Ga0075280_10031241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	968	Open in IMG/M
3300006237\|Ga0097621_100067908	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2939	Open in IMG/M
3300006755\|Ga0079222_10918494	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300006846\|Ga0075430_101494698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	555	Open in IMG/M
3300006847\|Ga0075431_100760226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	944	Open in IMG/M
3300006894\|Ga0079215_10533026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	743	Open in IMG/M
3300009095\|Ga0079224_101175197	Not Available	1093	Open in IMG/M
3300009095\|Ga0079224_101886110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	848	Open in IMG/M
3300009095\|Ga0079224_104194090	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009098\|Ga0105245_11571377	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	709	Open in IMG/M
3300009147\|Ga0114129_11088130	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1001	Open in IMG/M
3300009174\|Ga0105241_12559508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	512	Open in IMG/M
3300009868\|Ga0130016_10008698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	17131	Open in IMG/M
3300010362\|Ga0126377_12441939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	599	Open in IMG/M
3300010399\|Ga0134127_10453222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1283	Open in IMG/M
3300011119\|Ga0105246_11694784	Not Available	600	Open in IMG/M
3300011439\|Ga0137432_1113041	Not Available	857	Open in IMG/M
3300012210\|Ga0137378_11210765	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	671	Open in IMG/M
3300012212\|Ga0150985_104202287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	507	Open in IMG/M
3300012212\|Ga0150985_105744103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	543	Open in IMG/M
3300012212\|Ga0150985_117773807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	568	Open in IMG/M
3300012354\|Ga0137366_10649997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	754	Open in IMG/M
3300012469\|Ga0150984_115364904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	563	Open in IMG/M
3300012931\|Ga0153915_10144398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2573	Open in IMG/M
3300012931\|Ga0153915_10754001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1127	Open in IMG/M
3300012931\|Ga0153915_12719508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	578	Open in IMG/M
3300012943\|Ga0164241_10153360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1649	Open in IMG/M
3300012958\|Ga0164299_11007111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	614	Open in IMG/M
3300012964\|Ga0153916_10503028	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1282	Open in IMG/M
3300012985\|Ga0164308_11846001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	563	Open in IMG/M
3300012988\|Ga0164306_11596661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	562	Open in IMG/M
3300012989\|Ga0164305_12174088	Not Available	510	Open in IMG/M
3300013105\|Ga0157369_11404695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	711	Open in IMG/M
3300013307\|Ga0157372_10831761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1072	Open in IMG/M
3300014169\|Ga0181531_10977864	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	531	Open in IMG/M
3300015371\|Ga0132258_10822040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2343	Open in IMG/M
3300017966\|Ga0187776_11510377	Not Available	516	Open in IMG/M
3300017973\|Ga0187780_10275469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1181	Open in IMG/M
3300018465\|Ga0190269_10567888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	757	Open in IMG/M
3300021090\|Ga0210377_10029833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3907	Open in IMG/M
3300021362\|Ga0213882_10291974	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	679	Open in IMG/M
3300021384\|Ga0213876_10040618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2458	Open in IMG/M
3300025909\|Ga0207705_10906941	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300025917\|Ga0207660_10227684	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1465	Open in IMG/M
3300025921\|Ga0207652_10412664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1218	Open in IMG/M
3300025921\|Ga0207652_11612497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	553	Open in IMG/M
3300025925\|Ga0207650_11236486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	636	Open in IMG/M
3300025929\|Ga0207664_11718079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	550	Open in IMG/M
3300025937\|Ga0207669_10250278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1319	Open in IMG/M
3300025938\|Ga0207704_10424501	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1055	Open in IMG/M
3300025944\|Ga0207661_10464287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1154	Open in IMG/M
3300025944\|Ga0207661_10733438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	909	Open in IMG/M
3300026095\|Ga0207676_10914735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	861	Open in IMG/M
3300026121\|Ga0207683_10014174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	6792	Open in IMG/M
3300028802\|Ga0307503_10026360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1988	Open in IMG/M
3300031562\|Ga0310886_10374097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	834	Open in IMG/M
3300031708\|Ga0310686_110446957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	693	Open in IMG/M
3300031716\|Ga0310813_10392610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1192	Open in IMG/M
3300031892\|Ga0310893_10272289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300031938\|Ga0308175_101548289	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	741	Open in IMG/M
3300031943\|Ga0310885_10498209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	663	Open in IMG/M
3300031943\|Ga0310885_10713551	Not Available	564	Open in IMG/M
3300031944\|Ga0310884_10499870	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300032157\|Ga0315912_10160204	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1764	Open in IMG/M
3300032770\|Ga0335085_10662355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1166	Open in IMG/M
3300032892\|Ga0335081_10014920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	12573	Open in IMG/M
3300032954\|Ga0335083_10007695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	13275	Open in IMG/M
3300033158\|Ga0335077_11259301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	721	Open in IMG/M
3300033475\|Ga0310811_11455414	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	517	Open in IMG/M
3300033480\|Ga0316620_10449639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1178	Open in IMG/M
3300033513\|Ga0316628_100159858	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2651	Open in IMG/M
3300033551\|Ga0247830_11730252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.17%
Host-Associated	Host-Associated	26.96%
Engineered	Engineered	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.35%
Plants	Host-Associated → Plants	25.22%
Aquatic	Environmental → Aquatic	7.83%
Human	Host-Associated → Human	1.74%
Wastewater	Engineered → Wastewater	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.57%
Freshwater	Environmental → Aquatic → Freshwater	5.22%
Marine	Environmental → Aquatic → Marine	1.74%
Digestive System	Host-Associated → Human → Digestive System	1.74%
Roots	Host-Associated → Plants → Roots	1.74%
Sediment	Environmental → Aquatic → Sediment	0.87%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.87%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.26%
Loam	Environmental → Terrestrial → Soil → Loam	16.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.74%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.74%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.87%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.74%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.87%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.83%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	3.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	2.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.74%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	0.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.87%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003313	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sample	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005258	Microbial communities on the surface of bentonite enhanced biochar	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300005904	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_08335952	2228664021	Soil	MQDVRWPLLKRLLIEDGWNWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALD
ICChiseqgaiiDRAFT_24371122	3300000033	Soil	MQDVRWPLLKRLLIEDGWNWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN*
ICChiseqgaiiDRAFT_24386182	3300000033	Soil	MQDVRWPLLKRLLIDDGWTWREDTLFAPRETMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
ICChiseqgaiiDRAFT_24390482	3300000033	Soil	MQDVRWPLLKRLLVEDGWEWKENTLYAPRETMWFTTSSEAPNYAEFRDRMSETLEXVNQGDLHHDLVSLVTALDTVLRGN*
JGI11643J12802_114787192	3300000890	Soil	MQDVRWPLLKRLLIEDGWNWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTA
JGI10216J12902_1071469992	3300000956	Soil	MQDVRWPLLRRLLVADGWEWRDNTLFAPRETMWFTTNSEAPNYAEFRDRMSETLEEVDQGDLHHDLVSLVSALDTVLRGN*
P32013IDBA_10634783	3300003313	Ore Pile And Mine Drainage Contaminated Soil	MQDVRWPLLKRLLVEDGWTWRDETLYAPRETMWFTTSSEAPNYAEFRDRMSETLEEVNKGDLHADLVSLVSALDTVLRGN*
soilH1_101687212	3300003321	Sugarcane Root And Bulk Soil	MQDVRWPLLKRLLIDDGWTWREDTLYAPNQTMWFKTSTETPNYAEFRDKMSETLERVDQVELHQDLVSLVSALDCVLRGN*
P52013CM_10196212	3300003465	Ore Pile And Mine Drainage Contaminated Soil	VQSIAAMQDVRWPLLKRLLIEDGWTWREDTLFAPRETMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0055470_101373432	3300003992	Natural And Restored Wetlands	MQDVRWPLLKRLLVEDGWNWREDTLLAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDTVLRGN*
Ga0055462_102229751	3300004015	Natural And Restored Wetlands	MQDVRWPLLKRLLIEDGWVLRDDTLVAPHHTMWFATRTQLPDFAEFRDRVTSTLGEVDRTDLKSDLVSLVAALDTVLEGN*
Ga0062593_1000587024	3300004114	Soil	VHPIALMQDVRWPLLKRLLIEDGWTWREDTLFAPRETMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0062593_1000864882	3300004114	Soil	MQDVRWPLLRRLLVADGWEWRENTLFAPRATMWFTTNSEAPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0062589_1028804232	3300004156	Soil	MQDVRWPLLKRLLLDDGWSWREDTLFAPRQTMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0062591_1019533141	3300004643	Soil	MQDVRWPLLKRLLVEDGWKWREETLYAPRETMWFTTSAQTPNYAEFRDRMSETLEEVDQGDLHHDLVSLVSALDTVLRGN*
Ga0058862_117505442	3300004803	Host-Associated	MQDVRWPLLKRLLVDDGWAWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVAALDTVLRGN*
Ga0058862_118886261	3300004803	Host-Associated	VRWPLLKRLLIDDGWNWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN*
Ga0062594_1021534282	3300005093	Soil	MQDVRWPLLKRLLLEDGWTWREDTLFAPHETMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0074071_10059394	3300005258	Soil	MQDVRWPLLKRLLVDDGWAWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN*
Ga0074071_10190353	3300005258	Soil	MQDVRWPLLKRLLLDDGWQWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN*
Ga0070658_113708051	3300005327	Corn Rhizosphere	MQDVRWPLLKRLLIDDGWQWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN*
Ga0070683_1000933744	3300005329	Corn Rhizosphere	MQDVRWPLLKRLLIEDGWLWREDTLYAPHQTMWFKTSTETPNYAEFRDKMSETLEKVDQEELHLDLVSLVSALDCVLRGN*
Ga0070683_1009541292	3300005329	Corn Rhizosphere	MQDVRWPLLKRLLIDDGWIWREDTLFAPRQTMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0070670_1016290551	3300005331	Switchgrass Rhizosphere	MRRAAISRMQDVRWPLLKRLLIDDGWVWRENSLFAPHETMWFTTHSDTPNYAEFRDRMSETLEEVNQGDLHADLVSLVSALDTVLRGN*
Ga0070689_1001084322	3300005340	Switchgrass Rhizosphere	MQDVRWPLLKRLLIDDGWVWRENSLFAPHETMWFTTHSDTPNYAEFRDRMSETLEEVNQGDLHADLVSLVSALDTVLRGN*
Ga0070674_1002531863	3300005356	Miscanthus Rhizosphere	MQDVRWPLLKRLLLDDGWLWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN*
Ga0070674_1015149261	3300005356	Miscanthus Rhizosphere	MQDVRWPLLKRLLLDDGWRWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN*
Ga0070714_1024268021	3300005435	Agricultural Soil	MHDVRWPLLKRLLLDDGWVWRDNTLYAPHDTMWFTTSSETPDYAEFRDRMSETLEQVDQTDLHADLVSLVSALDTVLRGN*
Ga0070710_104495083	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MQDVRWPLLKRLLIDDGWVWREDTLFAPHQTMWFKTSTETPNYAEFRDKMSETLERVDQEELHKDL
Ga0070705_1010890231	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RMQDVRWPLLKRLLIDDGWAWREDTLFAPRQTMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0070694_1018992252	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	KRLLIDDGWAWREGTLFAPRETMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0070678_1010580942	3300005456	Miscanthus Rhizosphere	VRWPLLKRLLLDDGWMWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN*
Ga0070698_10000023416	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VQFTAAMQDVRWPLLKRLLIDDGWIWRENTLFAPHQTMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0070698_1021701282	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQDVRWPLLKRLLIDDGWAWREDTLFAPRQTMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0073909_104006922	3300005526	Surface Soil	MQDVRWPLLKKLLIEDGWVWRENTLYAPHETMWFTASTESPNYAEFRDRMTETLEEVDQVELHADLVSLVSALDTVLRGN*
Ga0070679_1016791982	3300005530	Corn Rhizosphere	DGWNWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN*
Ga0070684_1022346851	3300005535	Corn Rhizosphere	MQDVRWPLLKRLLLDDGWSWREETLFAPRETMWFQTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN*
Ga0070696_1015558682	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MQDVRWPLLKRLLIEDGWVWREDTLYAPHQTMWFTTSSETPNYAEFRDRMSETLERVDQAELHADLVSLVSALDTVLRGN*
Ga0068859_1021418731	3300005617	Switchgrass Rhizosphere	MRPMHDVRWPLLKRLLIEDGWVWREDTLYAPHETMWFKTNHEAPNYAEFRDRMSETLEHVDQVELHEDLVSLVAALDTVLRGN*
Ga0068859_1022374542	3300005617	Switchgrass Rhizosphere	DGWVWRENSLFAPHETMWFTTHSDTPNYAEFRDRMSETLEEVNQGDLHADLVSLVSALDTVLRGN*
Ga0068864_1004958452	3300005618	Switchgrass Rhizosphere	VQQLPGMQDVRWPLLKRLLIEDGWVWRESTLFAPRETMWFTTNSDSPNYAEFRDRMSETLEEVNQGDLHADLVSLVSALDTVLRGN*
Ga0066903_1017551373	3300005764	Tropical Forest Soil	MQDVRWPLLKRLLISDGWVWREDTLYAPHQTMWFKTSSETPNYAEFRDRMSETLEHVDRGELHSDLVSLVSALDTVLRGN*
Ga0075278_10789432	3300005893	Rice Paddy Soil	MQDVRWPLLKRLLVEDGWEWRENTLYAPRATMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0075280_100312413	3300005904	Rice Paddy Soil	MQDVRWPLLKRLLIEDGWNWREDTLLAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDTVLRGN*
Ga0097621_1000679084	3300006237	Miscanthus Rhizosphere	LLKRLLIDDGWVWREDTLYAPHQTMWFKTSTETPNYAEFRDKMSETLEKVDQEELHQDLVSLVSALDCVLRGN*
Ga0079222_109184941	3300006755	Agricultural Soil	MQDVRWPLLKRLLIEDGWNWRENTLFAPNETMWFTTSAETPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0075430_1014946982	3300006846	Populus Rhizosphere	VQSQTGMQDVRWPLLKRLLIDDGWTWSEDTLFAPRQTMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0075431_1007602263	3300006847	Populus Rhizosphere	MQDVRWPLLKRLLIDDGWTWSEDTLFAPRQTMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0079215_105330262	3300006894	Agricultural Soil	MQDVRWPLLKRLLIDDGWSWREGTLFAPRETMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0079224_1011751972	3300009095	Agricultural Soil	MAEGWTWTEDDGTLHAPNGTMWFSQSSRDPNYAEFRDKMSEIMEEVDDHELHADLVSLVSGLDIVLRGN*
Ga0079224_1018861102	3300009095	Agricultural Soil	MQDVRWPLLKRLLLEDGWTWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0079224_1041940901	3300009095	Agricultural Soil	MQDVRWPLLKRLLVEDGWTWRDDTLYAPRETMWFTTSAETPNYAEFRDRMSETLEEVDQGDLHADLVSLVAALDTVLRGN*
Ga0105245_115713772	3300009098	Miscanthus Rhizosphere	MQDVRWPLLKRLLIDDGWVWREDTLYAPHQTMWFKTSTETPNYAEFRDKMSETLEKVDQEELHQDLVSLVSALDCVLRGN*
Ga0114129_110881303	3300009147	Populus Rhizosphere	MQDVRWPLLKRLLIDDGWSWREDTLFAPRQTMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0105241_125595082	3300009174	Corn Rhizosphere	LLKRLLIEDGWLWREDTLYAPHQTMWFKTSTETPNYAEFRDKMSETLEKVDQEELHLDLVSLVSALDCVLRGN*
Ga0130016_100086983	3300009868	Wastewater	MQDVRWPLLKRLLIEDGWSWRENTLFAPHETMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0126377_124419391	3300010362	Tropical Forest Soil	MQDVRWPLLKRLLLDDGWTWRDDTLFAPRETMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0134127_104532222	3300010399	Terrestrial Soil	MQDVRWPLLKRLLIDDGWAWREGTLFAPRETMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0105246_116947841	3300011119	Miscanthus Rhizosphere	MQDVRWPLLRRLLLADGWEWRENTLYAPRATMWFTTNSEAPNYAEFRDRMSETLEEVDQGDLQKDLISLVSALDTVLRGN*
Ga0137432_11130412	3300011439	Soil	MQDVRWPLLKRLLIDDGWTWREDTLFAPRETMWFTTNSETPNYAEFRDRMSETLEEVDQGDLHHDLVSLVSALDTVLRGN*
Ga0137378_112107652	3300012210	Vadose Zone Soil	MQDVRWPLLKRLLIEDGWMWREDTLFAPHQTMWFKTSTETPNYAEFRDRMSETLEKVDQVELHHDLVSLVSALDTVLRGN*
Ga0150985_1042022872	3300012212	Avena Fatua Rhizosphere	VRWPLLKRLLVEDGWEWRDNTLFAPRETMWFTTNSEAPNYAEFRDRMSETLEEVDKGDLHHDLVSLVSALDTVLRGN*
Ga0150985_1057441032	3300012212	Avena Fatua Rhizosphere	RWPLLKRLLVEDGWVWREDTLYAPHETMWFTTSSESPNYAEFRDRMSETLERVDQKNLHDDLVSLVSALDTVLRGN*
Ga0150985_1177738072	3300012212	Avena Fatua Rhizosphere	VRWPLLKRLLVEDGWEWRENTLFAPRETMWFTTNSEAPNYAEFRDRMSETLEEVDQGDLHHDLVSLVSALDTVLRGN*
Ga0137366_106499971	3300012354	Vadose Zone Soil	VQSIPAMQDVRWPLLKRLLIEDGWTWRLDTLFAPRETMWFTTSSDAPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0150984_1153649042	3300012469	Avena Fatua Rhizosphere	RWPLLKRLLVEDGWEWRENTLFAPRETMWFTTNSEAPNYAEFRDRMSETLEEVDQGDLHHDLVSLVSALDTVLRGN*
Ga0153915_101443983	3300012931	Freshwater Wetlands	MQDVRWPLLKRLLVEDGWEWRDNTLFAPHETMWFTTSSEAPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0153915_107540013	3300012931	Freshwater Wetlands	MQDVRWPLLKRLLIEDGWQWREDTLLAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLD
Ga0153915_127195081	3300012931	Freshwater Wetlands	MQDVRWPLLKRLLVDDGWVWREDTLFAPHETMWFTTSTETPNYAEFRDRMTETLEEVDQRDLHADLVSLVSALDTVLRGN*
Ga0164241_101533601	3300012943	Soil	MQDVRWPLLKRLLVEDGWEWKENTLYAPRETMWFTTSSEAPNYAEFRDRMSETLEEVNQGDLHHDLVSLVTALDTVLRGN*
Ga0164299_110071112	3300012958	Soil	PMQDVRWPLLKRRLLDDGWRWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEIDQGDLHADLVSLVTALDTVLRGN*
Ga0153916_105030283	3300012964	Freshwater Wetlands	MQDVRWPLLKRLLVEDGWVWREDTLFAPHETMWFTTNSEAPNYAEFRDRMTETLEQVDQGDLHADLVSLVAALDTVLRGN*
Ga0164308_118460011	3300012985	Soil	MQDVRWPLLKRLLLDDGWRWREDTLFAPHETMWFTTGSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN*
Ga0164306_115966611	3300012988	Soil	VFCPMQDVRWPLLKRLLVEDGWEWKENTLYAPRETMWFTTSSEAPNYAEFRDRMSETLEEVNQGDLHHDLVSLVTALDTVLRGN*
Ga0164305_121740881	3300012989	Soil	MQDVRWPLLKRLLVEDGWEWRENTLYAPRATMWFTTSTETPNYAEFRDRMSETLEEVDQGDLHTDLVSLVTALDTVLRGN*
Ga0157369_114046952	3300013105	Corn Rhizosphere	MQDVRWPLLKRLLVEDGWTWRENSLYAPHETMWFQTSTEAPDYAEFRDRMSETLEEVDQGALHQDLVSLVSALDCVLRGN*
Ga0157372_108317612	3300013307	Corn Rhizosphere	MQDVRWPLLKRLLIDDGWNWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN*
Ga0181531_109778642	3300014169	Bog	MQDVRWPLLKRLLVDDGWVWRDDTLCAPHATMWFTTSAESPDYAEFRDRMSETLERVDQAALHDDLVSLVSALDVVLRGN*
Ga0132258_108220403	3300015371	Arabidopsis Rhizosphere	MQDVRWPLLRRLLVADGWEWRDNTLFAPRATMWFTTNSEAPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN*
Ga0187776_115103772	3300017966	Tropical Peatland	CHTVAWTLVAWAVQWSSGMQDVRWPLLKKLLVEDGWVWRDNTLYAPHQTMWCTASNESPNYAEFRDRMTETLEEVDQVDLHADLVSLVSALDTVLRGN
Ga0187780_102754692	3300017973	Tropical Peatland	WPLLKRLLVEDGWVWRENTLYAPHETMWFTTSSDTPDYAEFRDRMTETLERVDQSDLHDDLVSLVSALDTVLRGN
Ga0190269_105678881	3300018465	Soil	VQSIRAMQDVRWPLLKRLLIDDGWTWREDTLFAPRETMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN
Ga0210377_100298335	3300021090	Groundwater Sediment	MQDVRWPLLKRLLVDDGWTWREDTLYAPRQTMWFTTSSEAPNYAEFRDRMTETLEEVNQGDLHHDLVSLVSALDTVLRGN
Ga0213882_102919743	3300021362	Exposed Rock	MQDVRWPLLKRLLVDDGWSWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADL
Ga0213876_100406181	3300021384	Plant Roots	MQDVRWPLLKRLLVDDGWSWREDTLFAPHETMWFTTSSETPNYAEFCDRMSETLEEVDQGDLHADLVSLVAALDTVLRGN
Ga0207705_109069412	3300025909	Corn Rhizosphere	WALHPQPFMQDVRWPLLKRLLIDDGWQWREDTLFAPRETMWFQTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN
Ga0207660_102276841	3300025917	Corn Rhizosphere	MQDVRWPLLKRLLIEDGWNWRENTLFAPNETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDTVLRGN
Ga0207652_104126642	3300025921	Corn Rhizosphere	MQDVRWPLLKRLLVDDGWAWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVAALDTVLRGN
Ga0207652_116124972	3300025921	Corn Rhizosphere	RWPLLKRLLIDDGWNWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN
Ga0207650_112364862	3300025925	Switchgrass Rhizosphere	MQDVRWPLLKRLLIDDGWVWRENSLFAPHETMWFTTHSDTPNYAEFRDRMSETLEEVNQGDLHADLVSLVSALDTVLRGN
Ga0207664_117180791	3300025929	Agricultural Soil	MHDVRWPLLKRLLLDDGWVWRDNTLYAPHDTMWFTTSSETPDYAEFRDRMSETLEQVDQTDLHADLVSLVSALDTVLRGN
Ga0207669_102502783	3300025937	Miscanthus Rhizosphere	MQDVRWPLLKRLLLDDGWLWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN
Ga0207704_104245011	3300025938	Miscanthus Rhizosphere	MQDVRWPLLKRLLVEDGWTWRNDTLYAPRETMWFTTSSEAPNYAEFRDRMSETLEDVNQGDLHQDLVSLVSALDTVLRGN
Ga0207661_104642873	3300025944	Corn Rhizosphere	MQDVRWPLLKRLLIEDGWLWREDTLYAPHQTMWFKTSTETPNYAEFRDKMSETLEKVDQEELHLDLVSLVSALDCVLRGN
Ga0207661_107334381	3300025944	Corn Rhizosphere	SGPMQDVRWPLLKRLLIDDGWIWREDTLFAPRQTMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN
Ga0207676_109147351	3300026095	Switchgrass Rhizosphere	QQLPGMQDVRWPLLKRLLIEDGWVWRESTLFAPRETMWFTTNSDSPNYAEFRDRMSETLEEVNQGDLHADLVSLVSALDTVLRGN
Ga0207683_100141742	3300026121	Miscanthus Rhizosphere	MQDVRWPLLKRLLLDDGWRWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDCVLRGN
Ga0307503_100263603	3300028802	Soil	MQDVRWPLLRRLLVADGWEWRDNTLYAPRATMWFTTSTETPNYAEFRDRMSETLEEVDQGDLHHDLVSLVSALDTVLRGN
Ga0310886_103740972	3300031562	Soil	MQDVRWPLLKRLLVEDGWTWREDTLYAPKETMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHQDLVSLVSALDTVLRGN
Ga0310686_1104469571	3300031708	Soil	MQDVRWPLLKRLLVEDGWVWREDTLYAPHETMWFTTSSQSPNYAEFRDRMSETLQKVDQVELHDDLVSLVSALDVVLRGN
Ga0310813_103926101	3300031716	Soil	MQDVRWPLLKRLLIDDGWTWREDTLFAPRETMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN
Ga0310893_102722891	3300031892	Soil	MQDVRWPLLKRLLVEDGWTWRDETLYAPKETMWFTTSSDTPNYAEFRDRMTETLEEVDQGDLHQDLVSLVSALDTVLRGN
Ga0308175_1015482891	3300031938	Soil	MQDVRWPLLKRLLVDDGWAWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGELHADLVSLVTALDTVLRGN
Ga0310885_104982092	3300031943	Soil	SAMQDVRWPLLKRLLVEDGWTWREDTLYAPKETMWFTTSSDTPNYAEFRDRMSETLEEVDQGDLHQDLVSLVSALDTVLRGN
Ga0310885_107135512	3300031943	Soil	MQDVRWPLLKRLLVEDGWTWREETLYAPRETMWFTTSAETPNYAEFRDRMSETLEEVNQGDLHADLVSLVSALDTVLRGN
Ga0310884_104998702	3300031944	Soil	MQDVRWPLLKRLLVEDGWTWREETLYAPRETMWFTTSAHTPNYAEFRDRMSETLEEVNQRDLHADLVSLVSALDTVLRGN
Ga0315912_101602043	3300032157	Soil	MQDVRWPLLKRLLVEDGWTWRDDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEDVNQGDLHQDLVSLDTVLRGN
Ga0335085_106623552	3300032770	Soil	MQDVRWPLLKRLLVDDGWVWRENTLYAPHETMWFTTSSDSPDYAEFRDRMTETLERVDQSDLHDDLVSLVSALDTVLRGN
Ga0335081_100149208	3300032892	Soil	MLDVRWPLLKRLLIDDGWIWREDALYAPHNTMWFTTSSGVPDYAEFRDRMSETLEQVDHVDLHADLQSLVSALDCVLRGN
Ga0335083_100076957	3300032954	Soil	MQDVRWPLLKRLLVEDGWVWRENTLYAPHETMWFTTSSDSPDYAEFRDRMTETLERVDQSDLHDDLVSLVSALDTVLRGN
Ga0335077_112593012	3300033158	Soil	MQDVRWPLLKRLLVEDGWVWRENTLCAPHETMWFTTSSDTPDYAEFRDRMTETLERVDQSDLHDDLVSLVSALDTVLRGN
Ga0310811_114554142	3300033475	Soil	MQDVRWPLLKRLLIDDGWQWREDTLFAPRETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHSDLVSLVTALDTVLRGN
Ga0316620_104496391	3300033480	Soil	MQDVRWPLLKRLLIDDGWQWREDTLLAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN
Ga0316628_1001598583	3300033513	Soil	MQDVRWPLLKRLLLEDGWNWREDTLFAPHETMWFTTSSETPNYAEFRDRMSETLEEVDQGDLHADLVSLVTALDTVLRGN
Ga0247830_117302522	3300033551	Soil	DVRWPLLKRLLIDDGWTWRENTLFAPHETMWFTTNSDTPNYAEFRDRMSETLEEVDQGDLHADLVSLVSALDTVLRGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences