Metagenome Family F080184

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080184
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	79 residues
Representative Sequence	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP
Number of Associated Samples	87
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.78 %
% of genes near scaffold ends (potentially truncated)	33.91 %
% of genes from short scaffolds (< 2000 bps)	88.70 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.739 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.174 % of family members)
Environment Ontology (ENVO)	Unclassified (41.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.56% β-sheet: 0.00% Coil/Unstructured: 28.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13545	HTH_Crp_2	17.39
PF13628	DUF4142	6.09
PF00199	Catalase	2.61
PF14361	RsbRD_N	2.61
PF01434	Peptidase_M41	1.74
PF06210	DUF1003	1.74
PF02518	HATPase_c	1.74
PF00483	NTP_transferase	0.87
PF00202	Aminotran_3	0.87
PF13932	GIDA_C	0.87
PF13502	AsmA_2	0.87
PF00529	CusB_dom_1	0.87
PF05067	Mn_catalase	0.87
PF03239	FTR1	0.87
PF05974	DUF892	0.87
PF00392	GntR	0.87
PF00251	Glyco_hydro_32N	0.87
PF06628	Catalase-rel	0.87
PF00118	Cpn60_TCP1	0.87
PF01636	APH	0.87
PF13412	HTH_24	0.87
PF13334	DUF4094	0.87
PF07728	AAA_5	0.87
PF13091	PLDc_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0753	Catalase	Inorganic ion transport and metabolism [P]	3.48
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG4420	Uncharacterized membrane protein	Function unknown [S]	1.74
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG1621	Sucrose-6-phosphate hydrolase SacC, GH32 family	Carbohydrate transport and metabolism [G]	0.87
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.87
COG3507	Beta-xylosidase	Carbohydrate transport and metabolism [G]	0.87
COG3546	Mn-containing catalase (includes spore coat protein CotJC)	Inorganic ion transport and metabolism [P]	0.87
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.74 %
Unclassified	root	N/A	38.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.74 %
Unclassified	root	N/A	38.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.74 %
Unclassified	root	N/A	38.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.96 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.43 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.87 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.61 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.61 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.87 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.61 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.87 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.87 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.83 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.61 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.87 %
Burkholderia gladioli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	0.87 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_12598656	Not Available	822	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0515572	Not Available	514	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10869194	Not Available	581	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105443827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1447	Open in IMG/M
3300000956\|JGI10216J12902_100004326	All Organisms → cellular organisms → Bacteria	4516	Open in IMG/M
3300000956\|JGI10216J12902_102989235	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300000956\|JGI10216J12902_113111190	Not Available	2355	Open in IMG/M
3300000956\|JGI10216J12902_115430581	Not Available	1076	Open in IMG/M
3300004114\|Ga0062593_103011742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia gladioli	539	Open in IMG/M
3300004156\|Ga0062589_101993388	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300004157\|Ga0062590_100864409	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300004463\|Ga0063356_100212831	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300004479\|Ga0062595_101982348	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300004480\|Ga0062592_100578687	Not Available	949	Open in IMG/M
3300004643\|Ga0062591_100224472	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005293\|Ga0065715_10302782	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300005330\|Ga0070690_101264425	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005331\|Ga0070670_100297076	Not Available	1412	Open in IMG/M
3300005331\|Ga0070670_101897543	Not Available	549	Open in IMG/M
3300005333\|Ga0070677_10247032	Not Available	884	Open in IMG/M
3300005335\|Ga0070666_10784020	Not Available	701	Open in IMG/M
3300005338\|Ga0068868_101378469	Not Available	657	Open in IMG/M
3300005344\|Ga0070661_101658471	Not Available	541	Open in IMG/M
3300005354\|Ga0070675_101136764	Not Available	718	Open in IMG/M
3300005355\|Ga0070671_100027823	All Organisms → cellular organisms → Bacteria → Proteobacteria	4654	Open in IMG/M
3300005356\|Ga0070674_100271811	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300005356\|Ga0070674_100464830	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300005438\|Ga0070701_10415305	Not Available	856	Open in IMG/M
3300005564\|Ga0070664_101516566	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300005615\|Ga0070702_101061291	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300006038\|Ga0075365_11011281	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300006038\|Ga0075365_11120923	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300006042\|Ga0075368_10045266	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300006042\|Ga0075368_10053956	All Organisms → cellular organisms → Bacteria	1601	Open in IMG/M
3300006049\|Ga0075417_10017090	All Organisms → cellular organisms → Bacteria	2835	Open in IMG/M
3300006051\|Ga0075364_10122738	All Organisms → cellular organisms → Bacteria → Proteobacteria	1740	Open in IMG/M
3300006051\|Ga0075364_10410163	Not Available	925	Open in IMG/M
3300006237\|Ga0097621_100314004	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300006353\|Ga0075370_10100709	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300006881\|Ga0068865_101438753	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300007004\|Ga0079218_10801202	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300007004\|Ga0079218_11462847	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300009156\|Ga0111538_10314262	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300009156\|Ga0111538_10831122	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300009156\|Ga0111538_11215358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300009156\|Ga0111538_11916931	Not Available	745	Open in IMG/M
3300009177\|Ga0105248_13235331	Not Available	518	Open in IMG/M
3300009551\|Ga0105238_10552496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300009551\|Ga0105238_12437198	Not Available	559	Open in IMG/M
3300009553\|Ga0105249_11622932	Not Available	719	Open in IMG/M
3300009553\|Ga0105249_12182359	Not Available	627	Open in IMG/M
3300010399\|Ga0134127_12591889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300010400\|Ga0134122_12258183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300010403\|Ga0134123_10677978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300010403\|Ga0134123_13123773	Not Available	532	Open in IMG/M
3300011119\|Ga0105246_10976437	Not Available	765	Open in IMG/M
3300012897\|Ga0157285_10322910	Not Available	532	Open in IMG/M
3300012906\|Ga0157295_10405747	Not Available	510	Open in IMG/M
3300012908\|Ga0157286_10117487	Not Available	805	Open in IMG/M
3300012912\|Ga0157306_10227339	Not Available	644	Open in IMG/M
3300012915\|Ga0157302_10203883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300012951\|Ga0164300_11007683	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012984\|Ga0164309_11090746	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300013297\|Ga0157378_12494129	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300014745\|Ga0157377_11033487	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300014968\|Ga0157379_10311887	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300015371\|Ga0132258_10126867	All Organisms → cellular organisms → Bacteria → Acidobacteria	6075	Open in IMG/M
3300015371\|Ga0132258_10560753	All Organisms → cellular organisms → Bacteria	2864	Open in IMG/M
3300015371\|Ga0132258_11924289	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300015371\|Ga0132258_13653145	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300015374\|Ga0132255_100828623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1380	Open in IMG/M
3300015374\|Ga0132255_105810776	Not Available	522	Open in IMG/M
3300018476\|Ga0190274_12531638	Not Available	610	Open in IMG/M
3300019356\|Ga0173481_10596881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300019356\|Ga0173481_10869332	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300019361\|Ga0173482_10026521	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300021082\|Ga0210380_10567446	Not Available	520	Open in IMG/M
3300022915\|Ga0247790_10055412	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300023102\|Ga0247754_1014540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1673	Open in IMG/M
3300025903\|Ga0207680_10163191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1496	Open in IMG/M
3300025903\|Ga0207680_11025541	Not Available	591	Open in IMG/M
3300025925\|Ga0207650_10174747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1709	Open in IMG/M
3300025926\|Ga0207659_10094639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2239	Open in IMG/M
3300025926\|Ga0207659_10544070	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300025926\|Ga0207659_11145275	Not Available	669	Open in IMG/M
3300025931\|Ga0207644_10394854	Not Available	1130	Open in IMG/M
3300025933\|Ga0207706_10887496	Not Available	754	Open in IMG/M
3300025937\|Ga0207669_10418300	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300025937\|Ga0207669_11843171	Not Available	517	Open in IMG/M
3300025940\|Ga0207691_10148314	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300025945\|Ga0207679_10412742	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300025945\|Ga0207679_10849344	Not Available	834	Open in IMG/M
3300025961\|Ga0207712_10342323	Not Available	1240	Open in IMG/M
3300025981\|Ga0207640_10713645	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300026075\|Ga0207708_10800149	Not Available	811	Open in IMG/M
3300026088\|Ga0207641_10661301	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300027717\|Ga0209998_10125434	Not Available	649	Open in IMG/M
3300027866\|Ga0209813_10068713	Not Available	1147	Open in IMG/M
3300027866\|Ga0209813_10162657	Not Available	806	Open in IMG/M
3300027873\|Ga0209814_10017589	All Organisms → cellular organisms → Bacteria	2875	Open in IMG/M
3300027880\|Ga0209481_10333502	Not Available	772	Open in IMG/M
3300028587\|Ga0247828_11050821	Not Available	535	Open in IMG/M
3300028812\|Ga0247825_10002730	All Organisms → cellular organisms → Bacteria	11673	Open in IMG/M
3300031170\|Ga0307498_10075305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	983	Open in IMG/M
3300031562\|Ga0310886_10636625	Not Available	658	Open in IMG/M
3300031908\|Ga0310900_10073902	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2097	Open in IMG/M
3300031940\|Ga0310901_10386310	Not Available	607	Open in IMG/M
3300032012\|Ga0310902_10344732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300032075\|Ga0310890_10799204	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300032075\|Ga0310890_11656838	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300032122\|Ga0310895_10259003	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300032211\|Ga0310896_10065481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1521	Open in IMG/M
3300033412\|Ga0310810_10038387	All Organisms → cellular organisms → Bacteria	5849	Open in IMG/M
3300033412\|Ga0310810_10343149	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300034257\|Ga0370495_0037309	All Organisms → cellular organisms → Bacteria → Acidobacteria	1462	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	55.65%
Environmental	Environmental	44.35%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	55.65%
Terrestrial	Environmental → Terrestrial	43.48%
Aquatic	Environmental → Aquatic	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.17%
Roots	Host-Associated → Plants → Roots	8.70%
Freshwater	Environmental → Aquatic → Freshwater	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.78%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.22%
Loam	Environmental → Terrestrial → Soil → Loam	3.48%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.70%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.70%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	7.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.35%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0701.00005950	2162886012	Miscanthus Rhizosphere	MDSERERNHVDAEAVRQEYELERQAAERARVTAEHSRESAESGRRAVAGEVSETVADLRTLLARMEAVEALRRDARKGTP
ICChiseqgaiiDRAFT_05155721	3300000033	Soil	DMDIEMERRRANAEAERRQHELTRQTAERARVAAEESRASAEAGRRTIAAEVSGTIETLTTILTRMEAVEALRREAMKDTK*
ICChiseqgaiiFebDRAFT_108691941	3300000363	Soil	MDIEMERRRADAEAERHQHELTRQAAERARDDAEASRVAAENGRRALADEVRETVETLTTILNRMEAVEALRRDARKDTE*
INPhiseqgaiiFebDRAFT_1054438271	3300000364	Soil	NMESALERRHAAAEAVRQQHELERQAAENARNTAEQSRMSAETGRRAITDEVNGTVATLTTLLHRMEVVEALRRDAHKGPR*
JGI10216J12902_1000043264	3300000956	Soil	MDINLERRRADAEAERQQHELDRQVAERARAVAEESRASAEEWRCATAAEVTATIATLTTLLARMEGVEALRRQATKDKP*
JGI10216J12902_1029892352	3300000956	Soil	AEALRQQHELERQAAERTRQVAEELRTSAESGRRVFVDEVRISVATLTTLLHRMEAVEALRRDAKRKKKS*
JGI10216J12902_1131111903	3300000956	Soil	MDEMDRRHAEAEAIRQQQELERQAAEHVRNTSEGSRVSAEDRRRTVALEVNETIETLTTILHRMETVEALRREARKDPP*
JGI10216J12902_1154305812	3300000956	Soil	MNNESERRLADAEAERQQHERDRQGAERARIAAEESRVSAESGRRVVAGEVSETVAALQTLLKRMEAVEALRRDVPKEK*
Ga0062593_1030117421	3300004114	Soil	MDSETQRHHADAEAVRQQHELDRQAAERARMAAEASRVAAESGRRAIAGEVSETIATLKTLVSRMEAVEALRRDANKEAP*
Ga0062589_1019933882	3300004156	Soil	MDSDIERPHVDAEAVRQQHELKRQAAELARVAAEESRVSAENGRRAIAGEVSETIATLKTLVTRMEAVEALRRDAKKEAL*
Ga0062590_1008644091	3300004157	Soil	NMDSETQRHHADAEAVRQRHERERQAAERARMAAEESRVAAESGRRAIAGEVSETIATLKTLVSRMEAVEALRRDANKEAP*
Ga0063356_1002128313	3300004463	Arabidopsis Thaliana Rhizosphere	MFRWGYEHMDSEIERSRADAEAVRQQREIERQTAERARDAAEASRVVAEQGRRALVGEVSATVETLTTILKRMEAVETLRRDARNDAE*
Ga0062595_1019823482	3300004479	Soil	QRQQHELSRQAAERARNAAEESRVSAEHGRRAVAEEVSEIVATLTTLLNRMEAVEALRRDARKP*
Ga0062592_1005786873	3300004480	Soil	MDIEMERRRADAEAERQQHELIRQTAERARSAAEESRASAEDGRRAVAAEVSATIATLTTLLSRMEAVEALRR
Ga0062591_1002244722	3300004643	Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRMSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0065715_103027822	3300005293	Miscanthus Rhizosphere	EAERQQHELTRQAAERARAAAEESRMSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0070690_1012644252	3300005330	Switchgrass Rhizosphere	QQHELKRQAAELARVAAEESRVSAENGRRAIAGEVSETIATLKTLVTRMEAVEALRRDAKKEAL*
Ga0070670_1002970763	3300005331	Switchgrass Rhizosphere	MVSDTERRHADAEAVRQQHELERQSAERARIAAEESRVTAESSRRTVAGEVSETVATLTTLVRRMEAVEALRREAKKDAS*
Ga0070670_1018975431	3300005331	Switchgrass Rhizosphere	NMESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0070677_102470322	3300005333	Miscanthus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNAAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0070666_107840201	3300005335	Switchgrass Rhizosphere	VESALERRHAAAEAVRQQRELERVAAETSRNAAEQSRASAETARRAVTDEVHGTIATLKIVLDRMEAVEALRRHARSGRSKDVQE*
Ga0068868_1013784691	3300005338	Miscanthus Rhizosphere	MESVRERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVARMEVVEALRRSARKGAP*
Ga0070661_1016584711	3300005344	Corn Rhizosphere	RRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0070675_1011367642	3300005354	Miscanthus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNAAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRGARKGAP*
Ga0070671_1000278233	3300005355	Switchgrass Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0070674_1002718112	3300005356	Miscanthus Rhizosphere	TWSKGNENMDSERQRNHVDAETVRQEYELERQAAERARVTAEHSRESAESGRRAVAGEVSETVADLRTLLARMEAVEALRRDARKGTP*
Ga0070674_1004648301	3300005356	Miscanthus Rhizosphere	ADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVTVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0070701_104153052	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRGARKGAP*
Ga0070664_1015165661	3300005564	Corn Rhizosphere	MDSETERHHADAEAVRQRHERERQAAERARMAAEESRAAAESGRRAIASEVSETVATLRTLLTRMEAVEALRRDAKKEAL*
Ga0070702_1010612911	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ALGYGRDSHLKWRDENMESALERRHTAAEAVRQQHELERQAAENARNAAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRGARKGAP*
Ga0075365_110112813	3300006038	Populus Endosphere	MESEMERRHSAAEVVRQEHELERQTAESARNTAEKSRVLAETGRRAVADELHGTVVTLTTLVDRMRSSKRSGATRTRAR
Ga0075365_111209231	3300006038	Populus Endosphere	TVVAIVLIWREHVESALERRHAAAEAVRQQRELERVAAETSRNAAEQSRAAAETGRRAVTDEVRGTIATLKIVLDRMEAVEALRRDARSARSKDVQE*
Ga0075368_100452663	3300006042	Populus Endosphere	VESALERRHAAAEAVRQQRELERVAAETSRNAAEQSRASAETGRRAVTDEVRGTIATLKIVLDRMEAVEALRRDARSARSKDVQE*
Ga0075368_100539563	3300006042	Populus Endosphere	MESEMERRHSAAEVVRQEHELERQTAESARNTAEKSRVLAETGRRAVADEVHGTVVTLTTLVDRMEAVEALRRDAHKGTP*
Ga0075417_100170904	3300006049	Populus Rhizosphere	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRCAVAVEVSATIAALTTLLSRMEAVEALRREARKDTK*
Ga0075364_101227384	3300006051	Populus Endosphere	MESALERRHTAAEAVRQQHELERQAAENARNTAEQARVSAEAGRRTITDEVNGTVATLTTLVARMEVVEALRRSARKGAP*
Ga0075364_104101633	3300006051	Populus Endosphere	MERRHSAAEVVRQEHELERQTAESARNTAEKSRVLAETGRRAVADELHGTVVTLTTLVDRMEVVEALRRDAHKGTP*
Ga0097621_1003140041	3300006237	Miscanthus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVE
Ga0075370_101007092	3300006353	Populus Endosphere	VESALERRHAAAEAVRQQRELERVAAETSRNAAEQSRAAAETGRRAVTDEVRGTIATLKIVLDRMEAVEALRRDARSARSKDVQE*
Ga0068865_1014387532	3300006881	Miscanthus Rhizosphere	MDIELERRRADAEAERQQHELTRQAAEHARAAAEQSRVSAEDDRRAVTVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0079218_108012021	3300007004	Agricultural Soil	TDTDRPPRNAEAERQQHELIRQAAERARITAEESRVSAEDGRRAAAEEVRETIATLTTLLTRMEAVEALRRDARKDTE*
Ga0079218_114628471	3300007004	Agricultural Soil	MDTEMERRRGDAEARRHEHELAREAAERVRNIAEESRVAAENSRRAAAHEVTETLTTLTTLIARMEAVEALRRQATKDKP*
Ga0111538_103142621	3300009156	Populus Rhizosphere	MDIEMDRRRADAEAERQQHELARQTAERARAVAEELRVSAEHGRRVVAEDVRETIATLTTLLGRMEAVEALRREAGRDTK*
Ga0111538_108311222	3300009156	Populus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNAAEQSRVSAETGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0111538_112153581	3300009156	Populus Rhizosphere	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVTVEVSATIATLTTLLSRMEAVEALR
Ga0111538_119169311	3300009156	Populus Rhizosphere	MDIEMERRRADAEAERQQHEFTRQAAERARTTAEESRAFAEDGRRAAAAEVRATVATLTTLLSRMEAVEALRRE
Ga0105248_132353312	3300009177	Switchgrass Rhizosphere	MVSDTERRHADAEAVRQQHELERQSAERARLAAEESRVTAESSRRTIAGEVSETVATLTTLVRRMEAVEALRREAKKDAS*
Ga0105238_105524962	3300009551	Corn Rhizosphere	DTERRHADAEAVRQQHELERQSAERARIAAEESRVTAEGSRRTVAGEVSETVATLTTLVRRMEAVEALRREAKKDAS*
Ga0105238_124371983	3300009551	Corn Rhizosphere	PHVDAEAVRQQHELKRQAAELARVAAEESRVSAENGRRAIAGEVSETIATLKTLVTRMEAVEALRRDAKKEAL*
Ga0105249_116229322	3300009553	Switchgrass Rhizosphere	MESEMERRHSAAEVVRQEHELERQTAESARNTAEKSRVLAETGRRAVVDELLWTVVTLTTLVDRMEVVEALRRGARKGAP*
Ga0105249_121823592	3300009553	Switchgrass Rhizosphere	DAEAVRQEYELERQAAERARVTAEHSRESAESGRRAVAGEVSETVADLRTLLARMEAVEALRRDARKGTP*
Ga0134127_125918891	3300010399	Terrestrial Soil	EAERQQHELTRQAAERARAAAEESRVSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0134122_122581832	3300010400	Terrestrial Soil	MDIEIERRRAEAERQQQELERQAAERGRSAAEASRVSAETLRRVVSDDVRDTVVALNTILKRMEAVEALRRDVRKDPQ*
Ga0134123_106779782	3300010403	Terrestrial Soil	MDSERERNHVDAEAVRQEYELERQAAERARVTAEHSRESAESGRRAVAGEVSETVADLRTLLARMEAVEALRRDARKGTP*
Ga0134123_131237731	3300010403	Terrestrial Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVTVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0105246_109764372	3300011119	Miscanthus Rhizosphere	MDIELERRRADAEAERQQHELTRQAAEHARAAAEQSRVSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0157285_103229101	3300012897	Soil	MDIEMERRRADAEAERQQHELIRQTAERARSAAEESRASAEDGRRAVAAEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0157295_104057471	3300012906	Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVAVEVSATIATLTTLLSRME
Ga0157286_101174871	3300012908	Soil	MDIEMERRRADAEAERQQHELIRQTAERARSAAEESRASAEDGRRAVAAEVSATIATLTTLLSRMEAVEALRREAGKLGTSGHQA*
Ga0157306_102273391	3300012912	Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRASAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0157302_102038832	3300012915	Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP*
Ga0164300_110076831	3300012951	Soil	MDSDMERRRADAETERQQHELARQAAERARAVAEESRALAEEGRRSITDEVSTTVATLTTALSRMAAVEALRREARKDQT*
Ga0164309_110907461	3300012984	Soil	MDSDTERRHRDAEAVRQQHELERQSAERARIAAEESRVTAESSRHTVAGEVNETVATLTTLVRRMEAVEALRREAKKDA*
Ga0157378_124941292	3300013297	Miscanthus Rhizosphere	MDSDMERRRADAEAERQQHELARQAAERARAVAEESRAFAEEGRRSITDEVSTTVATLTTALSRMEAVEALRREARKDHT*
Ga0157377_110334873	3300014745	Miscanthus Rhizosphere	VRQQHELKRQAAELARVAAEESRVSAENGRRAIAGEVSETIATLKTLVTRMEAVEALRRDAKKEAL*
Ga0157379_103118872	3300014968	Switchgrass Rhizosphere	MESVRERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0132258_101268672	3300015371	Arabidopsis Rhizosphere	MDSERERLHAEAEAVRQQHELERQTAERARDTAEASRVAAENGRRALAGEVNETVETLTTILKRMEAVEALRRDARKGAE*
Ga0132258_105607532	3300015371	Arabidopsis Rhizosphere	MDIEMERRRADAEAERQQHEFTRQAAERARTTAEESRAFAEDGRRAAAAEVRATVATLTTLLSRMEAVEALRREARKDTK*
Ga0132258_119242892	3300015371	Arabidopsis Rhizosphere	MDRETERLHADAEAVREQHELERQAAECARNAAEESRVSAESGRRVVAGEVSETIATLKTLLARMESVEALRRYARRIRSSGVVKDAARRSAGPA*
Ga0132258_136531452	3300015371	Arabidopsis Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEARRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0132255_1008286231	3300015374	Arabidopsis Rhizosphere	MVSDTERRHADAEAVRQQHELERQSAERARIAAEESRVTAESSRRTVAGEVSETVATLTTLVRRMEAVEALRRDAKKDAS*
Ga0132255_1058107761	3300015374	Arabidopsis Rhizosphere	PLQLLRHVYVQWRTSPVEALGYGRDSHLKWRDANMESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEARRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP*
Ga0190274_125316382	3300018476	Soil	MESEIARRHAEAVRQQHELERQGSERARNTAEDARVSAETGRRVVADEVSETVATLKTLLNRMEAVEALRRDVRKD
Ga0173481_105968811	3300019356	Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRAAAEDDRRAVAVEVRATIATLTTLLSRME
Ga0173481_108693322	3300019356	Soil	RRADAEAERQQHELTRQAAERARAAAEESRMSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP
Ga0173482_100265213	3300019361	Soil	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP
Ga0210380_105674462	3300021082	Groundwater Sediment	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRLSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP
Ga0247790_100554122	3300022915	Soil	MESALERRHTAAEAVRQQHELERQAAENARNAAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP
Ga0247754_10145402	3300023102	Soil	MERAPLERRHAAAEAVRQQHELERQAAENARNTAEQSRASAETGRRAIANEVNGTVATLTTLVDRMEVVEALRRDARKGTP
Ga0207680_101631911	3300025903	Switchgrass Rhizosphere	MDSDIERPHVDAEAVRQQHELKRQAAELARVAAEESRVSAENGRRAIAGEVSETIATLKTLVTRMEAVEALRRDAKKEAL
Ga0207680_110255412	3300025903	Switchgrass Rhizosphere	MVSDTERRHADAEAVRQQHELERQSAERARLAAEESRVTAESSRRTIAGEVSETVATLTTLVRRMEAVEALRREAKKDAS
Ga0207650_101747473	3300025925	Switchgrass Rhizosphere	MVSDTERRHADAEAVRQQHELERQSAERARIAAEESRVTAESSRRTVAGEVSETVATLTTLVRRMEAVEALRREAKKDAS
Ga0207659_100946391	3300025926	Miscanthus Rhizosphere	MDSDIERPHVDAEAVRQQHELKRQAAELARVAAEESRVSAENGRRAIAGEVSETIATLKTLVTRMEAVEALR
Ga0207659_105440703	3300025926	Miscanthus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNAAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRGARKGAP
Ga0207659_111452751	3300025926	Miscanthus Rhizosphere	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVTVEVSATIATLTTLLSRMEAVEALRREARKDSRP
Ga0207644_103948541	3300025931	Switchgrass Rhizosphere	MVSDTERRHADAEAVRQQHELERQSAERARSAAEEARVTAESSRRTVAGEVSETVATLTTLVRRMEAVEALRREAKKDAS
Ga0207706_108874961	3300025933	Corn Rhizosphere	MDSDIERPHVDAEAVRQQHELKRQAAELARMAAEESRVSAENGRRAIAGEVSETIATLKTLVTRMEAVEALRRDAKKEAL
Ga0207669_104183001	3300025937	Miscanthus Rhizosphere	RADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVTVEVSATIATLTTLLSRMEAVEALRREARKDSRP
Ga0207669_118431711	3300025937	Miscanthus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARITAEQSRASAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKGAP
Ga0207691_101483142	3300025940	Miscanthus Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRGARKGAP
Ga0207679_104127422	3300025945	Corn Rhizosphere	MDSEIERSRADAEAVRQQREIERQTAERARDAAEASRVVAEQGRRALVGEVSATVETLTTILKRMEAVETLRRDARNDAE
Ga0207679_108493441	3300025945	Corn Rhizosphere	MVSDTERRHADAEAVRQQHELERQSAERARIAAEESRVTAESSRRTVAGEVSETVATLTTLVRRMEAVAALRREAKKDAS
Ga0207712_103423231	3300025961	Switchgrass Rhizosphere	VDAEAVRQEYELERQAAERARVTAEHSRESAESGRRAVAGEVSETVADLRTLLARMEAVEALRRDARKGTP
Ga0207640_107136452	3300025981	Corn Rhizosphere	MDSDIERPHVDAEAVRQQHELKRQAAELARVAAEESRVSAENGRRAIAGEVSETIATLKTLVSRMEAVEALRRDANKEAP
Ga0207708_108001491	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP
Ga0207641_106613011	3300026088	Switchgrass Rhizosphere	MESALERRHTAAEAVRQQHELERQAAENARNTAEQSRVSAEAGRRAITDEVNGTVATLTTLVDRMEVVEALRRSARKNAP
Ga0209998_101254342	3300027717	Arabidopsis Thaliana Rhizosphere	MDIEMERRRADAEAERQQHELIRQTAERARATAEESRASAEEGRRAVAAEVSATIATLTTLLSRMEAVEALRREARKVTN
Ga0209813_100687133	3300027866	Populus Endosphere	VESALERRHAAAEAVRQQRELERVAAETSRNAAEQSRASAETGRRAVTDEVRGTIATLKIVLDRMEAVEALRRDARSARSKDVQE
Ga0209813_101626572	3300027866	Populus Endosphere	MESEMERRHSAAEVVRQEHELERQTAESARNTAEKSRVLAETGRRAVADEVHGTVVTLTTLVDRMEAVEALRRDAHKGTP
Ga0209814_100175894	3300027873	Populus Rhizosphere	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRCAVAVEVSATIAALTTLLSRMEAVEALRREARKDTK
Ga0209481_103335022	3300027880	Populus Rhizosphere	DIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRCAVAVEVSATIAALTTLLSRMEAVEALRREARKDTK
Ga0247828_110508212	3300028587	Soil	MERAPLERRHAAAEAVRQQHELERQAAENARNTAEQSRASAETGRRAIANEVNGTVATLTTLVDRMEVVEALRRDARKGT
Ga0247825_100027305	3300028812	Soil	MDIEVERHRGEAEAVRQQHELERQTAERARDAAEASRAAAESGRRALAVEVSETVETLTTILKRMEAVEALRRDARRNAE
Ga0307498_100753051	3300031170	Soil	MESALERRHTAAEAVRQQHELERQAAENARRTAEQSRVSAEAGRRAITDEVNGAVATLTTLVDRMEVVEALRRSARKGAP
Ga0310886_106366251	3300031562	Soil	MDIELERRRADAEAERQQHELTRQAAEHARAAAEQSRVSAEDDRRAVAVEVSATIATLTTLLSRMEAVEALRREARKDSRP
Ga0310900_100739021	3300031908	Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRCAVAVEVSATIAALTTLLSRMEAVEALRREARKDT
Ga0310901_103863101	3300031940	Soil	MDIELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRCAVAVEVSATIAALTTLLSRMEAVEALRREARKDSRP
Ga0310902_103447321	3300032012	Soil	IELERRRADAEAERQQHELTRQAAERARAAAEESRVSAEDDRCAVAVEVSATIAALTTLLSRMEAVEALRREARKDTK
Ga0310890_107992042	3300032075	Soil	MDIELERRRADAEAERQQHELARQTAERARAVAEELRVSAEHGRRVVAEDVRETIATLTTLLGRMEAVEALRREAGRDTK
Ga0310890_116568382	3300032075	Soil	LRQQHELDRQSAERARGAAEDFRVAAENGRRVLADEVSGTVETLTTIVNRMEAVEALRRDTGKERP
Ga0310895_102590032	3300032122	Soil	MDIELERRRADAEAERQQHELTRQAAEHARAAAEESRVSAEDDRRAVTVEVSATIATLTTLLSRMEAVEALRREARKDSRP
Ga0310896_100654812	3300032211	Soil	MDIEMDRRRADAEAERQQHELARQTAERARAVAEELRVSAEHGRRVVAEDVRETIATLTTLLGRMEAVEALRREAGRDTK
Ga0310810_100383877	3300033412	Soil	MVSDTERRHADAEAVRQQHELERQSAERARLAAEESRVAAESSRRTVAGEVSETVATLTTLVRRMEAVAALRREAKKDAS
Ga0310810_103431492	3300033412	Soil	MFRWGYEHMDSEIERSRADAEAVRQQREIERQTAERARDAAEASRVVAEQGRRALVGEVSATVETLTTILKRMEAVETLRRDARNDAE
Ga0370495_0037309_675_917	3300034257	Untreated Peat Soil	MESALDRRHAATEAVRQQHELERQAAESARHTAETSRASEETRRRAVADEVHQTIATLTALVDRMEVVEALRRDAYRGTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080184

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences