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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F080176 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 115 |
| Average Sequence Length | 56 residues |
| Representative Sequence | MDNNKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV |
| Number of Associated Samples | 84 |
| Number of Associated Scaffolds | 115 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 84.35 % |
| % of genes near scaffold ends (potentially truncated) | 27.83 % |
| % of genes from short scaffolds (< 2000 bps) | 80.00 % |
| Associated GOLD sequencing projects | 75 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.30 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (64.348 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.565 % of family members) |
| Environment Ontology (ENVO) | Unclassified (43.478 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (64.348 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 14.12% β-sheet: 0.00% Coil/Unstructured: 85.88% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.30 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 115 Family Scaffolds |
|---|---|---|
| PF05402 | PqqD | 7.83 |
| PF07475 | Hpr_kinase_C | 3.48 |
| PF13692 | Glyco_trans_1_4 | 1.74 |
| PF07731 | Cu-oxidase_2 | 0.87 |
| PF01594 | AI-2E_transport | 0.87 |
| PF04151 | PPC | 0.87 |
| PF00990 | GGDEF | 0.87 |
| PF13411 | MerR_1 | 0.87 |
| COG ID | Name | Functional Category | % Frequency in 115 Family Scaffolds |
|---|---|---|---|
| COG1493 | Serine kinase of the HPr protein, regulates carbohydrate metabolism | Signal transduction mechanisms [T] | 3.48 |
| COG0628 | Predicted PurR-regulated permease PerM | General function prediction only [R] | 0.87 |
| COG2132 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) | Cell cycle control, cell division, chromosome partitioning [D] | 0.87 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 64.35 % |
| All Organisms | root | All Organisms | 35.65 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 9.57% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 8.70% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 8.70% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 8.70% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 6.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 6.96% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 6.09% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 5.22% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.35% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.48% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.61% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.61% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.61% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 1.74% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.74% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 1.74% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.74% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.74% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.87% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.87% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.87% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.87% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.87% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.87% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.87% |
| Soil | Environmental → Terrestrial → Soil → Loam → Unclassified → Soil | 0.87% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 0.87% |
| Quercus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere | 0.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.87% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.87% |
| Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 0.87% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.87% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.87% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.87% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.87% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2162886013 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000546 | Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled | Host-Associated | Open in IMG/M |
| 3300000559 | Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly | Environmental | Open in IMG/M |
| 3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
| 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
| 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Environmental | Open in IMG/M |
| 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
| 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Environmental | Open in IMG/M |
| 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
| 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
| 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
| 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009799 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Host-Associated | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014883 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT760_16_10D | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300018429 | Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T | Environmental | Open in IMG/M |
| 3300022898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5 | Environmental | Open in IMG/M |
| 3300024317 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01 | Environmental | Open in IMG/M |
| 3300025271 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025327 | Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
| 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Host-Associated | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| SwBSRL2_0989.00006730 | 2162886013 | Switchgrass Rhizosphere | MDNQKPILVTTTALANDAEPAMPLAPRKEFVEPTVSEPIDILAATKAFLQITGGGDV |
| INPhiseqgaiiFebDRAFT_1020062242 | 3300000364 | Soil | MDNQKPILVTTTVLANESEPTMPLAPSREFVEPEVSEPIDILAATKAFLQITGGGDV* |
| INPhiseqgaiiFebDRAFT_1020070333 | 3300000364 | Soil | MDNKTEPVPNSAIADTFEPAVSXAPKKEFVEPEVSESVDILAATKFFLQITGGGDV* |
| INPhiseqgaiiFebDRAFT_1020076752 | 3300000364 | Soil | MDNKTEPVPNSAIADTFEPAVSMAPKKEFVEPEVSESVDIXAATKFXLQXTGGGDV* |
| INPhiseqgaiiFebDRAFT_1020096483 | 3300000364 | Soil | MDKKTETVPNSAIADTLEPAVVVAPKKEFVEPEVSESVDILAATKFFLQITGGGDV* |
| LJNas_10113622 | 3300000546 | Quercus Rhizosphere | MEKNKPVDTATVTVNASEPVVPVAPAREFIEPEISEPVDILAATKFFLQVTGGGDV* |
| F14TC_1031921862 | 3300000559 | Soil | MDKNKTADIATLVNAAEPVEAVVPTKEFVEPEISEPVDILAATKFFLQVTGGGDV* |
| JGI1027J11758_126418712 | 3300000789 | Soil | MDNKTEPVPNSAIADTFEPAVSMAPKKEFVEPEVLEPVDIVAATKFFLQVTGGGDV* |
| Ga0062593_1003422012 | 3300004114 | Soil | MDNQKPILVTPTVLANESEPAMPLAPSKKFVEPEVSEPIDILAATKAFLQITGGGDV* |
| Ga0062593_1004389982 | 3300004114 | Soil | MDNKTEPVPNSAVADTFEPAVSVAPRREFVEPQVREPVDIVAVTKFFLQITGGGDV* |
| Ga0062595_1006623132 | 3300004479 | Soil | MDNKTEPVPNSAIADTFEPAVSMAPKKEFVEPEVSESVDILAATKFFLQVTGGGDV* |
| Ga0058859_114244852 | 3300004798 | Host-Associated | MDNQKPILVTPTVLANESEPAMPLAASKKFVEPEVSEPIDILAATKAFLQITGGGDV* |
| Ga0058860_113539801 | 3300004801 | Host-Associated | MDNNKTELVPTSGITDTSEPTVSVAPKKEFVEPEISEPVDILAATKFFLQVTGGGDV* |
| Ga0062594_1005703781 | 3300005093 | Soil | MDNNKTELVPTGEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV* |
| Ga0065714_101662162 | 3300005288 | Miscanthus Rhizosphere | LVTPTVLANESEPAMPLAPSKKFVEPEVSEPIDILAATKAFLQITGGGDV* |
| Ga0065705_102334262 | 3300005294 | Switchgrass Rhizosphere | MDHQKPILVTTTALANDAEPAMPLAPRKEFVEPTVSEPIDILAATKAFLQITGGGDV* |
| Ga0065707_101207042 | 3300005295 | Switchgrass Rhizosphere | MDHQKPILVTTTALANDAEPAMPLAPRKEFVEPAVSEPIDILAATKAFLQITGGGDV* |
| Ga0070690_1010575082 | 3300005330 | Switchgrass Rhizosphere | MDNKKTELVPTGEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV* |
| Ga0068869_1000368382 | 3300005334 | Miscanthus Rhizosphere | MDNNKTEFVTTSDIANASEPAVPVAPKKDFVEPEVSEPIDILAATKFFLQVTGGGDV* |
| Ga0068869_1001156214 | 3300005334 | Miscanthus Rhizosphere | MDNNKNEFVATSGNANVSEPAAPVAPKKEFVEPEVSEPVDILAATKFFLQITGGGDV* |
| Ga0068869_1014985452 | 3300005334 | Miscanthus Rhizosphere | MDNKTEPVPNSAVADTFEPAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV* |
| Ga0070687_1000588764 | 3300005343 | Switchgrass Rhizosphere | MDNNKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV* |
| Ga0070692_103876852 | 3300005345 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNNKTTDLATVVANTSEPAVTAPPTKEFIEPEISEPVDILAATKFFLQVTGGGDV* |
| Ga0070671_1019385481 | 3300005355 | Switchgrass Rhizosphere | KTEPVPNSAVADTFEPAVSVVPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV* |
| Ga0070701_105741722 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNKKTELAPTGEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITG |
| Ga0070701_108975742 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNKTEPVPNSAVADTFEPAVSVVPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV* |
| Ga0070705_1002805941 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNQEPVVTTAVLANDSEPAMPLAPRKDFVEPEVSEPIDILAATKAFLQ |
| Ga0070705_1014263912 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNNKTEFVPTSGIATSEPAVSAPKKEFVEPEISEPVDILAATKFFLQVTGGGDV* |
| Ga0070694_1004432821 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNQEPVVTTAVLANDSEPAMPLAPRKDFVEPEVSEPIDILAATKAFLQITGGGDV* |
| Ga0068867_1005243742 | 3300005459 | Miscanthus Rhizosphere | MDNNKTEFVTTSDIANALEPAVPVAPKKDFVEPEVSEPIDILAATKFFLQVTGGGDV* |
| Ga0070686_1000024654 | 3300005544 | Switchgrass Rhizosphere | MDNNKTTDLATVAANASEPAVTAPPTKEFVEPEISEPVDILAATKFFLQVTGGGDV* |
| Ga0070686_1006589662 | 3300005544 | Switchgrass Rhizosphere | MDNNKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKF |
| Ga0070695_1000199424 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNQKTEFVSTSGKANVSEPTVPVAPKKEFVEPEVSEPVDILAATKFFLQITGGGDV* |
| Ga0070696_1005540421 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNKNEFVKTSGSANDSEPAVPLAPKKEFVEPEVSEPVDILAATKFFLQITGGGDV* |
| Ga0070704_1019411121 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNKNEFVKTSGNANDSEPAVPLAPKKEFVEPEVSEPVDILAATKFFLQITGGGDA* |
| Ga0070702_1009186002 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNKTEPVLNSTIADTFELAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV* |
| Ga0068861_1002330452 | 3300005719 | Switchgrass Rhizosphere | MDNNKTELVPTSTIANTSEPAVSVAPKKDFVEPEISEPVDVMAATKFFLQVTGGGDV* |
| Ga0068863_1002180163 | 3300005841 | Switchgrass Rhizosphere | MDNKTEPVPNSAVADTFEPAVSVVPRKEFVEPQVREPVDIVAVTKFFLQITGGGD |
| Ga0068863_1007926702 | 3300005841 | Switchgrass Rhizosphere | TAVLANDSEPAMPLAPRKDFVEPEVSEPIDILAATKAFLQITGGGDV* |
| Ga0068863_1018952281 | 3300005841 | Switchgrass Rhizosphere | MDKKTETVPNSAIADTLEPAVLVAPKKEFVEPEVLEPVDIVAATKFFLQITGGGDV* |
| Ga0097621_1010469562 | 3300006237 | Miscanthus Rhizosphere | MDNKTEPVLNSTIADTFELAVSVAPRKEFVEPQVREPVDIVAVTKFFLQ |
| Ga0068871_1006365532 | 3300006358 | Miscanthus Rhizosphere | MDNKKEPVLNSTIADTFELAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV* |
| Ga0105240_121558512 | 3300009093 | Corn Rhizosphere | KNYRQGNFMDNNKTELVPTSTIANTSEPAVSVAPKKDFVEPEISEPVDVMAATKFFLQVTGGGDV* |
| Ga0105245_109120311 | 3300009098 | Miscanthus Rhizosphere | MDNNKTEFVTTSDIANALEPAVPVAPKKDFVEPEVSEPIDILAATKFFLQVTGGGD |
| Ga0105245_129111852 | 3300009098 | Miscanthus Rhizosphere | MDNDKTDLVPASTIANTSEPAVSVAPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV* |
| Ga0075418_102219402 | 3300009100 | Populus Rhizosphere | MDNKTEPVPNSVIADTFEPAVSAAPKKEFVEPEIREPVDIVAATKFFLQVTGGGDV* |
| Ga0105243_100005016 | 3300009148 | Miscanthus Rhizosphere | MDNKTEPVPNSAIADTFEPAVSMAPKKEFVEPEVSESVDILAATKFFLQITGGGDV* |
| Ga0111538_110351702 | 3300009156 | Populus Rhizosphere | MDNKKTELAPTGEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV* |
| Ga0105242_129853422 | 3300009176 | Miscanthus Rhizosphere | MDNNKNEFVTTSSNVNVSEPAVPVAPKKEFVEPEVSEPVDILAATKFFLQITGGGDV* |
| Ga0105242_130287551 | 3300009176 | Miscanthus Rhizosphere | MDNDKTDLVPASAIANTSEPAVSVALKKEFVEPEVSEPVDILAATKFFLQVTGGGDV* |
| Ga0105075_10587202 | 3300009799 | Groundwater Sand | MEMKNTDQVTKNVAANNADSALPVMPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV* |
| Ga0134125_1000019147 | 3300010371 | Terrestrial Soil | MDNNKTELLPTSGIANTSEPAVSVAPKKEFVEPEISEPVDILAATKFFLQVTGGGDV* |
| Ga0134128_117431572 | 3300010373 | Terrestrial Soil | MDNNKNEFVTTSGDANVSEPAAEVAPKKEFVEPEVSEPVDILAATKFFLQITGGGDV* |
| Ga0134127_101483363 | 3300010399 | Terrestrial Soil | MTPTVLANDSEPAMPLAPRKDFVEPEVSEPIDILAATKAFLQITGGGDV* |
| Ga0134127_113224991 | 3300010399 | Terrestrial Soil | MDNNKNEFVTTSGDANVSEPAAEVAPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV* |
| Ga0134122_102093432 | 3300010400 | Terrestrial Soil | MEMKNTDHVTTNVAANNSEPALPVMPEKEFVEPEVSEPVDILAATKFFLQVTGGGDV* |
| Ga0134122_103804331 | 3300010400 | Terrestrial Soil | MEKNNAVDIATVTANASEPVVPAPAREFIEPEISEPVDILAATKFFLQVTG |
| Ga0134122_106999562 | 3300010400 | Terrestrial Soil | MDNKKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV* |
| Ga0134122_122359572 | 3300010400 | Terrestrial Soil | MDNKNEFVKTSGSVNVSEPAVPVAPKKEFVEPEVSEPVDILAATKFFLQITGGGDV* |
| Ga0134122_123227291 | 3300010400 | Terrestrial Soil | MDNNKIELVPTSTLANTSEPAISAAPKKEFVEPEVSEPVDILAATKFFLQVT |
| Ga0134122_130585531 | 3300010400 | Terrestrial Soil | LATVAANASEPAVTTAPTKEFIESEISEPVDILAATKFFLQVTGGGDV* |
| Ga0164299_103965212 | 3300012958 | Soil | MDNQEPILVTTTVLANDSEAAIPLEARKEFVEPEVSDPINILAATKAFLQITGGGDV* |
| Ga0164301_118312271 | 3300012960 | Soil | NQKPILVTPTVLANESEPAMPLAPSKKFVEPEVSEPIDILAATKAFLQITGGGDV* |
| Ga0164307_102748332 | 3300012987 | Soil | MLVTTTVLANDSEAAIPLAARKEFVEPEVSEPINILAATRAFLQITGGGDV* |
| Ga0164305_106621092 | 3300012989 | Soil | DNQEPILVITTVLANDSEVAIPLAARKEFVEPEVSEPINILAATKAFLQITGGGDV* |
| Ga0157373_102090031 | 3300013100 | Corn Rhizosphere | MDNNKNEFVTTSGDANVSEPAAEVAPKKEFVEPEVSEPVDILAATKFFLQ |
| Ga0163162_113023802 | 3300013306 | Switchgrass Rhizosphere | SSEELSSMDNQKPILVTPTVLANESEPAMPLAPSKKFVEPDVSEPIDILAATKAFLQITGGGDV* |
| Ga0163163_101116782 | 3300014325 | Switchgrass Rhizosphere | MDNQKPILVTPTVLANESEPAMPLAPSKKFVEPEVSEPIDILAATKAFLQITGGGYV* |
| Ga0180086_10000297 | 3300014883 | Soil | MDKNETADIATVVVNAAEPALPAAPTKDFIEPEISEPVDILAATKFFLQITGGGDV* |
| Ga0132258_100742461 | 3300015371 | Arabidopsis Rhizosphere | YGQVNYMDNNKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV* |
| Ga0132258_104972831 | 3300015371 | Arabidopsis Rhizosphere | MDNKKTELVPTGEIANSSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQI |
| Ga0132256_1002888882 | 3300015372 | Arabidopsis Rhizosphere | MDNQKPILVTPTVLANESEHALPLAPSKEFVEPEVSEPIDILAATTAFLQITGGGDV* |
| Ga0132256_1010154472 | 3300015372 | Arabidopsis Rhizosphere | MDNQEPVVTTAVLANDSEPAMPLAPRKDFVEPEVSEPIDILASTKAFLQITGGGDV* |
| Ga0132257_1008569941 | 3300015373 | Arabidopsis Rhizosphere | PNSAIADTLEPAVLVAPKKEFVEPEILEPVDIVAATKFFLQITGGGDV* |
| Ga0163161_104406572 | 3300017792 | Switchgrass Rhizosphere | MDNKKEPVLNSTIADTFELAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV |
| Ga0163161_119746011 | 3300017792 | Switchgrass Rhizosphere | NSAVADTFEPAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV |
| Ga0190272_100095306 | 3300018429 | Soil | MHNNKTAEIETVVANASEPAVTPAPTREFIEPEISEPVDILAATKFFLQITGGGDV |
| Ga0247745_10262732 | 3300022898 | Soil | MDNQKPILVTPTVLANESEPAMPLAPSKKFVEPEVSEPIDILAATKAFLQITGGGDV |
| Ga0247660_10023172 | 3300024317 | Soil | MDNKTEPVPNSAIADTFEPAVSMAPKKEFVEPEVSESVDILAATKFFLQVTGGGDV |
| Ga0207666_10890241 | 3300025271 | Corn, Switchgrass And Miscanthus Rhizosphere | SSEELSSMDNQKPILVTPTVLANESEPAMPLAPSKKFVEPEVSEPIDILAATKAFLQITGGGDV |
| Ga0209751_101725414 | 3300025327 | Soil | MEDNKTELVTTSVIADTSDPAEPVAPRKEFVEPEVSEPVDIMGATKVFLQISGE |
| Ga0207642_100325522 | 3300025899 | Miscanthus Rhizosphere | MDNQEPVVTTAVLANDSEPAMPLAPRKDFVEPEVSEPIDILAATKAFLQITGGGDV |
| Ga0207643_102485642 | 3300025908 | Miscanthus Rhizosphere | MDNNKTEFVTTSDIANASEPAVPVAPKKDFVEPEVSEPIDILAATKFFLQVTGGGDV |
| Ga0207662_101846932 | 3300025918 | Switchgrass Rhizosphere | MDNNKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQVT |
| Ga0207662_107976681 | 3300025918 | Switchgrass Rhizosphere | MDNKTEPVPNSVIADTFEPAVSAAPKKEFVEPEIREPVDIVAATKFFLQVTGGGDV |
| Ga0207659_103082592 | 3300025926 | Miscanthus Rhizosphere | MDNKTEPVLNSTIADTFELAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV |
| Ga0207701_109400752 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNNKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV |
| Ga0207686_1000006947 | 3300025934 | Miscanthus Rhizosphere | MDNKTEPVPNSAIADTFEPAVSMAPKKEFVEPEVSESVDILAATKFFLQITGGGDV |
| Ga0207686_104111722 | 3300025934 | Miscanthus Rhizosphere | MDNKTEPVPNSAVADTFEPAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV |
| Ga0207709_109443151 | 3300025935 | Miscanthus Rhizosphere | MDNNKTEFVTTSDIANALEPAVPVAPKKDFVEPEVSEPIDILAATKFFLQVTGGGDV |
| Ga0207670_105968042 | 3300025936 | Switchgrass Rhizosphere | MDNKTEPVPNSAVADTFEPAVSVAPRKEFVEPQVREPVDIVAVTKFFLQITG |
| Ga0207704_107412272 | 3300025938 | Miscanthus Rhizosphere | SAIANTSEPAVSVAPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV |
| Ga0207689_105180311 | 3300025942 | Miscanthus Rhizosphere | MDNQEPVVTTAVLANDSEPAMPLAPRKDFVEPEVSEPIDILAATKAFLQITGGG |
| Ga0207689_109930661 | 3300025942 | Miscanthus Rhizosphere | MDNNKNEFVATSGNANVSEPAAPVAPKKEFVEPEVSEPVDILAATKFFLQITGGGDV |
| Ga0207677_105518431 | 3300026023 | Miscanthus Rhizosphere | SSMDNQEPVVTTAVLANDSEPAMPLAPRKDFVEPEVSEPIDILAATKAFLQITGGGDV |
| Ga0207703_100339953 | 3300026035 | Switchgrass Rhizosphere | MDNKTEPVPNSAVADTFEPAVSVVPRKEFVEPQVREPVDIVAVTKFFLQITGGGDV |
| Ga0207708_108100812 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MDNNKTELVPTGEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV |
| Ga0207702_109820451 | 3300026078 | Corn Rhizosphere | MDNQEPVVTTAVLANDSEPAMPLAPSKKFVEPEVSEPIDILAATKAFLQITGGGDV |
| Ga0207641_125684411 | 3300026088 | Switchgrass Rhizosphere | MDKKTETVPNSAIADTLEPAVLVAPKKEFVEPEVLEPVDIVAATKFFLQITGGGDV |
| Ga0207674_118461571 | 3300026116 | Corn Rhizosphere | MDNNKTEFVTTSDIANASEPAVPVAPKKDFVEPEVSEPIDILAATKFFLQVTGG |
| Ga0207675_1000788183 | 3300026118 | Switchgrass Rhizosphere | MDNNKTELVPTSTIANTSEPAVSVAPKKDFVEPEISEPVDVMAATKFFLQVTGGGDV |
| Ga0268264_106852731 | 3300028381 | Switchgrass Rhizosphere | MDNNKTTDLATVVANTSEPAVTAPPTKEFIEPEISEPVDILAATKFFLQVTGGGDV |
| Ga0137415_109028182 | 3300028536 | Vadose Zone Soil | MDKNKTADAATVVNASEPAVPTALTREFIEPEISEPVDILAATKFFLQV |
| Ga0307503_106458881 | 3300028802 | Soil | MDNKTEPVLNSPIADTFEPALAVAPRKEFVEPQVLEPVDIVAATKFFLQITGGGDV |
| Ga0307513_101460392 | 3300031456 | Ectomycorrhiza | MEKNKPVDIATVTANASEPVVPVAPTREFIEPEISEPVDILAATKFFLQVTGGGDV |
| Ga0307469_111831532 | 3300031720 | Hardwood Forest Soil | MDNQEPMLVTTTVLANDSEAAIPLEARKEFVEPEVSEPINILSATKAFLQITGGGDV |
| Ga0307469_113629062 | 3300031720 | Hardwood Forest Soil | MDNNKTEILPTSALANVSEPAVSAPKKEFIEPEVSEPVDILAATKFFLQVTGGGDV |
| Ga0307468_1012513652 | 3300031740 | Hardwood Forest Soil | MEKNNLENATVTANASEPVVPVAPAREFVEPDISEPVDILAATKFFLQVTGGGDD |
| Ga0307468_1014648391 | 3300031740 | Hardwood Forest Soil | MRMDTNYGQVNYMDNNKTELVPTSEIANTSEPAVSVAPKKEFVEPELSEPVDILAATKFFLQITGGGDV |
| Ga0307468_1015701791 | 3300031740 | Hardwood Forest Soil | MDNNKNDLVTNEIANASEPAVAGAPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV |
| Ga0307468_1022651271 | 3300031740 | Hardwood Forest Soil | MDKNKIDHETTSLTSNTSEPALSVAPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV |
| Ga0307468_1024396912 | 3300031740 | Hardwood Forest Soil | MDNNKTTDLANVVANASEPAVTTAPTKEFIEPEISEPVDILAATKFFLQVTGGGDV |
| Ga0307471_1022377421 | 3300032180 | Hardwood Forest Soil | MDNNKTEFATTNDIANALEPAVPVAPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV |
| Ga0307471_1026491972 | 3300032180 | Hardwood Forest Soil | MDTNNTDLVTPNVTANPSEPALPAAPKKEFVEPELSEPVDILAATKFFLQVTGGGDV |
| Ga0307472_1019342052 | 3300032205 | Hardwood Forest Soil | MDTNKTDHITANLTANTSEPALPVAPKKEFVEPEVSEPVDILAATKFFLQVTGGGDV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |