Metagenome Family F080173

Basic Information
Family ID	F080173
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	55 residues
Representative Sequence	MKKYGSIFHILSLACACLISVGCATNQPGAATAPPPNSGHLLVYRVPNFGTDLFLVL
Number of Associated Samples	102
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	7.83 %
% of genes from short scaffolds (< 2000 bps)	7.83 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Unclassified (93.043 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.478 % of family members)
Environment Ontology (ENVO)	Unclassified (33.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.522 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.53% β-sheet: 0.00% Coil/Unstructured: 76.47%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF06742	DUF1214	19.13
PF14023	DUF4239	16.52
PF01914	MarC	4.35
PF13505	OMP_b-brl	2.61
PF06863	DUF1254	1.74
PF08495	FIST	1.74
PF09865	DUF2092	0.87
PF01728	FtsJ	0.87
PF02518	HATPase_c	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	20.87
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	19.13
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	4.35
COG3287	FIST domain protein MJ1623, contains FIST_N and FIST_C domains	Signal transduction mechanisms [T]	1.74
COG4398	Small ligand-binding sensory domain FIST	Signal transduction mechanisms [T]	1.74
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	0.87
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	0.87

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.04 %
All Organisms	root	All Organisms	6.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.04 %
cellular organisms	root	All Organisms → cellular organisms	6.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	6.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.04 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.04 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.04 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	93.04 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.87 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10096105	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300005331\|Ga0070670_101665185	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005536\|Ga0070697_101681807	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006237\|Ga0097621_101524036	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010048\|Ga0126373_13288342	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	503	Open in IMG/M
3300010373\|Ga0134128_11357747	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300010376\|Ga0126381_103508452	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300013102\|Ga0157371_10912734	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300028824\|Ga0307310_10720680	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.22%
Host-Associated	Host-Associated	14.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Plants	Host-Associated → Plants	14.78%
Aquatic	Environmental → Aquatic	5.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.43%
Sediment	Environmental → Aquatic → Sediment	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.48%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.43%
Loam	Environmental → Terrestrial → Soil → Loam	9.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1013434671	3300000955	Soil	MKKYGSIIQVLSLACAGIILIGCGTTTQPGAATVPPPKNAGHLLVYRVANFGSNLVLVLSID
JGI1027J12803_1026556493	3300000955	Soil	IHVLSLACAGIILIGCGTTTQPAAATAPPPKNSGHLLVYRVANFGSNL
JGI10220J13317_104565051	3300001139	Soil	MKKYGSIVHILSLACVCLISVGCATNQPAAATAPPNSGHLLVYRVPNSGTGIFLVLSVDGKHVGSF
Ga0062591_1015390862	3300004643	Soil	MKKYYSIICILTLACAGIFLVGCETTQSGAAAAPPPPNSARLLVNRVANFGSDL
Ga0066672_100961051	3300005167	Soil	MKKYGSIVHILSLACVCLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLGLILSVDGKDVGSFTEGRNY
Ga0066673_101833863	3300005175	Soil	MKKYGSIFHILSLACACLISVGCATNQPGAATAPPPNSGHLLVYRVPNFGTDLFLVL
Ga0066673_106961033	3300005175	Soil	MKKYSSIVYILSLAFACLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLFLVLSVDGKDVG
Ga0066684_109255842	3300005179	Soil	MKKYSSIVCILSLAFACLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLFLVLSVDG
Ga0066675_111058111	3300005187	Soil	MKKYSSIIHILSLACACLIAGCATQPGAATAPPPNSGHVL
Ga0065712_100409241	3300005290	Miscanthus Rhizosphere	MKKYHSIICILTLACIGLMMVGCETTQQGASAPPPPNSARLLVNRVANFGSD
Ga0065715_106965182	3300005293	Miscanthus Rhizosphere	MKKYNSIIYILSLACACLIAVGCTTGPGAATAPPPNSGHVLIYRVANFGENLGLVVSVD
Ga0065705_103971191	3300005294	Switchgrass Rhizosphere	MKKYYSIICILILACIGLIMVGCETTQSGAAAAPPPPNSARLLVNRVA
Ga0070670_1016651851	3300005331	Switchgrass Rhizosphere	MKKHGSIVHILSLACACAISVGCATNQPGAATAPPNSGHLLVNRVANFG
Ga0070660_1012431592	3300005339	Corn Rhizosphere	MKKHGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLGLILSI
Ga0070711_1002732251	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHLLVNRAANFGTNLGLILSVDGKDVGSFPE
Ga0070711_1018191442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVNRAANFGTNLGLILSVDGKDVGSFPE
Ga0070708_1006547123	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKRYKSIIHILSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGS
Ga0066686_104701873	3300005446	Soil	MKKHSLIIHTLNLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGSNLSLV
Ga0066682_103935792	3300005450	Soil	MKKYGSIFHILSLACACLISVGCATNQPGAATAAPPNSGHLLVYRVPNFGTDLFLV
Ga0066687_104537631	3300005454	Soil	MGASKGVRNMKKSRSIVHILSLACACLIGAGCATQPGAATAQPPNSGHVLIYR
Ga0070707_1017642052	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKKYYSIIYILSLACAGLIFTGCETTQSGAATAPPPNSGHLLIYRVANFGSDLSLV
Ga0070697_1016818071	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKRYSSIIHILGLACVCLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLGLILSIDGKDVGSFTEG
Ga0066697_107783692	3300005540	Soil	MKKYGSIVQILSLACACAISVGCATSQPGAATAPPNSGHLLVYRVPNFGTDLFLVLSVDGKDVG
Ga0070693_1014881721	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHGSIVHILSLACACAISVGCATNQPGAATAPPNSGHLLVNRVANFGTDLFVVLSVDGKDV
Ga0066701_102657541	3300005552	Soil	MKKYGSIFHILSLACACLISVGCATNQPGAATAAPPNSGHLLVYRVPNFGTDLFLVLSVDGKDVGSF
Ga0066661_100936144	3300005554	Soil	MKKSRSIVHILSLACACLIGAGCATQPGTATAQPPNSGHVLIYR
Ga0066661_102084881	3300005554	Soil	MKKYGSIVHILSLACVCLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLGLILSVDGKDVGSF
Ga0066670_109109382	3300005560	Soil	MKKYCSIIYIFSLACACLIAVGCATQPGAATAPPPNAGHLIITRVANFG
Ga0066703_100578331	3300005568	Soil	MKKYSLIIHTLSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGT
Ga0066705_104516491	3300005569	Soil	MKKYGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLGLILSV
Ga0066705_106617982	3300005569	Soil	MKKYGSIVHILSLACVCLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLGLILSV
Ga0066694_101980203	3300005574	Soil	MKKYGSIVHILSLACVCLISVGCATNQPGAATAPPNSGHLLVNR
Ga0066708_107077833	3300005576	Soil	MKRYSSIIHILNLACACLIFTGCATNQPGAATAPPNSGHLLVYRVPNFGTDLFLVL
Ga0066706_112579261	3300005598	Soil	MKKYCSIINILSLAFACLIAAGCATQPGAATAPPPNSGRLLINRVANFGSDLSLVVSVDG
Ga0070717_107933221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVNRAANFGTNLGLI
Ga0097621_1015240362	3300006237	Miscanthus Rhizosphere	MKKHGSIVHILSLACACAISVGCATNQPGAATAPPNSGHLLVNRVANFGSDLFLVLSVDGKDVGSF
Ga0075424_1007979292	3300006904	Populus Rhizosphere	MKSYNVIIGILTLACAGMVLVGCETTQSGAAAAPPPNSGHLLIDRVANFGSNM
Ga0075424_1017411892	3300006904	Populus Rhizosphere	MKKYGSIVYILSLAYACLIAAGCTTGPGAASAPPPNSGQVLINRVANFGSNLSLVVS
Ga0075435_1013791382	3300007076	Populus Rhizosphere	MKKHGSIVHILSLACACAISVGCATNQPGAATAPPNSGHLLVNRVANFGTDLFVVLSVDG
Ga0099791_100662653	3300007255	Vadose Zone Soil	MKKYSLIIHTLSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGTNL
Ga0105250_101832951	3300009092	Switchgrass Rhizosphere	MKKYYSIICILTLACAGLFLVGCETTQSGAATAPPPNSGHVLIYRVANFGENLAL
Ga0066709_1016980392	3300009137	Grasslands Soil	MKNNKTIIQFLGLACACLISVGCATNQPGAATASPPNSGHLLVYRVANFGTDLSLILSVDGKDVG
Ga0105241_101397111	3300009174	Corn Rhizosphere	MKKFGSTIQILSLGCACLIGVGSPTQSGAATAPPNSGHLLVYRAAKFGDRLNLALSVDGK
Ga0105242_114253052	3300009176	Miscanthus Rhizosphere	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHLLVNRAANFGTNLGL
Ga0126384_110153731	3300010046	Tropical Forest Soil	MKKYSLIIQTLSLACACLISAGCASQPAGSASAPPPPNSARLVVDRIANFGTYVNLVL
Ga0126384_121986222	3300010046	Tropical Forest Soil	MKKYGSIIHILSLTCACLITAGCATQPGAATAPPPPNSGRLLVNRVANFGSDLSLV
Ga0126373_132883422	3300010048	Tropical Forest Soil	MKKYGSIIHVLSLACAGIILIGCSTTQQSTATGPPPPNSGRLIVDREANFGSGLVLVLSIDGKDVA
Ga0134070_101952981	3300010301	Grasslands Soil	MKRYSLIIHTLSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGSNLSLVVSV
Ga0134070_104373751	3300010301	Grasslands Soil	MKKYSSIIHILSLACACLIAGCATQPGAATAPPPNSGHLIVTRV
Ga0134065_100697361	3300010326	Grasslands Soil	MTTYRSIFHILSLACACLISVGCATNQPGAATAAPPNSGHLLVYRVANFGT
Ga0134065_101442571	3300010326	Grasslands Soil	MKKYCSIINILSLAFACLIAAGCATQPGAATAPPPN
Ga0134111_105344251	3300010329	Grasslands Soil	MKKHSLIIHALSLACAGLIAGCATNQPGAATAPPPNSGHVIINRDANFGSNLS
Ga0134063_102629931	3300010335	Grasslands Soil	MKKYGSIFHILSLACACLISVGCATNQPGAATAAPPNSGHLLVYRVPNFGTDLFLVLSVD
Ga0126372_130348141	3300010360	Tropical Forest Soil	MKKYSSIINVLTLACACLITAGCATQPGAATAPPPNSGHVIINRVA
Ga0126377_122204172	3300010362	Tropical Forest Soil	MKRYNSIVNVFSLACACLIAAGCSTQSGTANAPPPPNSGRL
Ga0134066_100242393	3300010364	Grasslands Soil	MKKSRSIVHILSLACACLLGAGCATQPGAATAQPPNSGHVLIYRV
Ga0126379_101171301	3300010366	Tropical Forest Soil	MKKYSSIISILSLACACLIAVGCATQPGAATAPPPNSGRVIINRVANFGADL
Ga0134128_113577471	3300010373	Terrestrial Soil	MKKYYPIICILTLACAGMALVSCETTQSGAAAAPTNSGHVLIYRVANFGADMALVVSVDGKDVGS
Ga0126381_1035084521	3300010376	Tropical Forest Soil	MKKDRSITYILSLACAGLILSACETTGPGAASAPPPNSGHVIITRVPNFGSDLSLVVSV
Ga0126383_117771812	3300010398	Tropical Forest Soil	MKKHIKTIYILSVACACLISVGCTTGPGAATAPPPNSGHVLIYRVANFG
Ga0120191_101030612	3300012022	Terrestrial	MKKYGSIINILSLACACLLAVGCTTGPGAARAPPNSGHVLIY
Ga0137383_105407113	3300012199	Vadose Zone Soil	MKKYCSIIYILSLACACLIAVGCATQPGAATAPPPNAGHLIITRVANFGSNLSLVVS
Ga0137382_101764991	3300012200	Vadose Zone Soil	MKKSRSIVHILSLACACLIGAGCATQPGTATAQPPNSGHVLIYRVPNFGSNLSL
Ga0137363_114132571	3300012202	Vadose Zone Soil	MKKYASIIHILSLACACLIAGCATQPGAAIAPPNSGHLIVTR
Ga0137377_104694551	3300012211	Vadose Zone Soil	MKKHGSIVQILSLACACAISVGCATSQPGAATAPPNSGHLLVYRVPNFGTDLFLVLS
Ga0137377_106741693	3300012211	Vadose Zone Soil	MKKYSSIIHILSLACACLIAGCATQPGAATAPPNSGHVLIYRVANFGSNLS
Ga0137366_106699272	3300012354	Vadose Zone Soil	MKKHSLITHTLSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGSNLSLVVSVD
Ga0137384_105857562	3300012357	Vadose Zone Soil	MKNHKTIIQFLGLVCACLISAGCATNQPGAATAPPPNSGHLL
Ga0137360_116691543	3300012361	Vadose Zone Soil	MKKYGSIIHILSLACAGIILIGCETTQQGAATAPPPKNSGHLLINRVANFGSNMSLVV
Ga0137394_111520242	3300012922	Vadose Zone Soil	MKKYGSIVQILSLACVCAISVGCATNQPGAATAPPNSGHLLVYRVANFGTDLGLILSVDG
Ga0134076_102783891	3300012976	Grasslands Soil	MKKHSLIIHTLSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGSNLSMVVSVDG
Ga0134076_103994972	3300012976	Grasslands Soil	MKRYSSIIYILSLACIGLILVACQTTGPGAATAPPPNSARLLIYRVANFGSNMA
Ga0164307_109894272	3300012987	Soil	MKKHGSIGLILSLACACAISAGCATNQHGAATAPPNSGHLLVYRVPNFGTDIGLILSIDGKDVGSFTE
Ga0164306_109978132	3300012988	Soil	MKKHGLIVHILSLACVCLISVGCATNQHGAATAPPNSGHLLVYRVANFGTDLGLILSIDGKDVG
Ga0164305_104240742	3300012989	Soil	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHL
Ga0164305_117853471	3300012989	Soil	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHLL
Ga0157371_109127341	3300013102	Corn Rhizosphere	MKKHGSIVHILSLACACAISVGCATNQPGAATAPPNSGHLLVNRVANFGTDL
Ga0157374_112267872	3300013296	Miscanthus Rhizosphere	MKKHGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVNRAANFGTNLGLILSVDGKDVGSFP
Ga0134085_102978111	3300015359	Grasslands Soil	MKKYCSIIYIFSLACACLIAVGCATQPGAATAPPPNSGHVLI
Ga0132256_1033940682	3300015372	Arabidopsis Rhizosphere	MKKHGSIVLILSLACACVISVGCATNQPSAATAPPNSGHLLVNRVPNFGTDLGLILSI
Ga0132257_1042175592	3300015373	Arabidopsis Rhizosphere	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHLLVNRAANFGTNLGLILSVDGKDVGS
Ga0134083_100486791	3300017659	Grasslands Soil	MKKYSSIVYILSLACAGLIAGCATNQPGAVTAPPPNSGHVIINR
Ga0163161_103254642	3300017792	Switchgrass Rhizosphere	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHLLVNR
Ga0184604_100797841	3300018000	Groundwater Sediment	MKKYNSIICILTLACVGIGLVGCETTQSGAAAAAPPNSGRVLINRVANFGADMALV
Ga0184608_101232813	3300018028	Groundwater Sediment	MKKYGSIIHILSLACVCLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLFLVLSV
Ga0184608_102694621	3300018028	Groundwater Sediment	MKKYSSIIYILSLACAGIILSGCETTQSGAATAPIPANSGRLTVTRVANFGTDLSLVL
Ga0184617_12456611	3300018066	Groundwater Sediment	MKKYGSIIHILSLACVCLISVGCATNQPGAATAPPNSGHLLVNRVPNF
Ga0066669_122579142	3300018482	Grasslands Soil	MKKYGSIFHILSLACACLIAVGCATNQPGAATAAPPNSGHLLVYRVPNFGTDLFLV
Ga0173479_106033762	3300019362	Soil	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHLLVNRAANFGTNLGLILSVDGKDVG
Ga0193732_10706971	3300020012	Soil	MKKYSSIIHILSLACVCLIFVGCATNQPGAATAPPNSGHLLVNRVPNFGTDLF
Ga0193726_12153152	3300020021	Soil	MKKYSSIIYILSLACACLISVGCATNQPGAATAPPPNSARLLVNRVANFGSNLVLI
Ga0210381_104033372	3300021078	Groundwater Sediment	MKKHGSIVHILSLACVCLISVGCATNQPGAATAPPNSGHLLVHRVANFGT
Ga0193695_10948642	3300021418	Soil	MKKYSSIIHILSLACACLIGGCATQPGAATAPPPNSGHLIVTRVA
Ga0222622_108609301	3300022756	Groundwater Sediment	MKKHGSIVHILSLACVCLISVGCATNQPGAATAPPNSGHLLVNRVPNFG
Ga0207663_111329021	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKKHGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVNRAANFGTNLGLILSV
Ga0207681_113133432	3300025923	Switchgrass Rhizosphere	MKKHGSIVLILSLACACVISVGCATNHPGAATAPPNSGHLLVNRAANFGTNLGLILSVDGKDVGSFPEGQ
Ga0207664_117201521	3300025929	Agricultural Soil	MKKHGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDIGLILSIDGKDVGSFT
Ga0209234_10800421	3300026295	Grasslands Soil	MKKYGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLFLVVSVDGKDVGSFTEG
Ga0209472_11696831	3300026323	Soil	MKKYGSIFHILSLACACLISVGCATNQPGAATAPPPNSGHLLVYRVPNFGTDLFLVLS
Ga0209152_103384272	3300026325	Soil	MKKYGSIVHILSLACVCLISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLFLVLSVDGKDVGSFSE
Ga0209802_10171571	3300026328	Soil	MKRYSSIIHILSLACACLIAGCATQPGAATAPPNSGHVLIY
Ga0209803_11633592	3300026332	Soil	MKKYGSIVQILSLACACVISVGCATNQPGAATAPPNSGHLLVYRVPNFGTDLGLILSVDG
Ga0209158_12707951	3300026333	Soil	MKKYSLIIHTLSLACAGLIAGCATNQPGAVTAPPPNSGHVIINRVANFGTNLSL
Ga0257162_10425871	3300026340	Soil	MKKHGSILQILSLACACAISVGCATNQPGTATAPPNSGHLLVYRVPNFGTDLFLVVSID
Ga0209160_12377981	3300026532	Soil	MKKYSLIIHTLSLACAGLIAGCATNQPGAVTAPPPNSGHVIINRVANFGTNLSLVVSVDG
Ga0209376_11459812	3300026540	Soil	MKKYCSIINILSLAFACLIAAGCATQPGAATAPPPNSGRLLINRVANFGSDLSLVVSV
Ga0307298_101939191	3300028717	Soil	MKKYYSIICILSLACACLISVGCATNQPGAATAPPPNSARLLVNRVANFGSNL
Ga0307292_104605421	3300028811	Soil	MKKHGSIVHILSLACVCLITVGCATNQPGAATAPPNSGHLLVNRVPNFGTDLFLVLSV
Ga0307310_107206802	3300028824	Soil	MKKYYSIIYILGLACACLISVGCATNQPGAATAPPPNSARLLVNRVANFGSNLVLILSVDGKD
Ga0307312_108295281	3300028828	Soil	MKKYSSIVQILSLACVCAISVGCATNQPGAATAPPNSGHLLVNRVPNFGTDLFLVLSVDGKD
Ga0307277_100501451	3300028881	Soil	MKKHGSIVHILSLACVCLITVGCATNQPGAATAPPNSGHLLVNRVPNFGTDLFLVLSVDG
Ga0170824_1075905331	3300031231	Forest Soil	MKKYGSIIQVLSLACAGIILIGCGTTTQPAAATAPPPKNAGHLLVYRVANFGSG
Ga0310892_109406072	3300031858	Soil	MKKYYSIICILTLACAGIFLVGCETTQSGAAAAPPPPNSARLLVNRVANFGSDLVL
Ga0310912_109668411	3300031941	Soil	MKKHSLIIPTLSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGSNLSLVV
Ga0310914_104062801	3300033289	Soil	MKKHSLIIPTLSLACAGLIAGCATNQPGAATAPPPNSGHVIINRVANFGS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080173

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign