Metagenome / Metatranscriptome Family F080129

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080129
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	50 residues
Representative Sequence	TMIELQVEHARIKSEIMQILTADQKAKLAQLEANREARMSKHAPPPPTD
Number of Associated Samples	97
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.39 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.435 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (14.783 % of family members)
Environment Ontology (ENVO)	Unclassified (50.435 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.35% β-sheet: 0.00% Coil/Unstructured: 50.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00664	ABC_membrane	43.48
PF07503	zf-HYPF	0.87
PF07813	LTXXQ	0.87
PF09286	Pro-kuma_activ	0.87
PF13801	Metal_resist	0.87
PF00375	SDF	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG0068	Hydrogenase maturation factor HypF (carbamoyltransferase)	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.35 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	62.61 %
Unclassified	root	N/A	29.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.61 %
Unclassified	root	N/A	29.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	62.61 %
Unclassified	root	N/A	29.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908035\|B3_GZOS_CLC_ConsensusfromContig122456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300004080\|Ga0062385_10914647	Not Available	583	Open in IMG/M
3300004082\|Ga0062384_100389790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300004092\|Ga0062389_102433346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300004092\|Ga0062389_104382298	Not Available	531	Open in IMG/M
3300004092\|Ga0062389_104801923	Not Available	509	Open in IMG/M
3300005177\|Ga0066690_10126427	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300005712\|Ga0070764_10403962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300005921\|Ga0070766_10404668	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300006052\|Ga0075029_100695495	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300006162\|Ga0075030_100335104	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300006354\|Ga0075021_11172521	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009029\|Ga0066793_10448210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300009519\|Ga0116108_1245869	Not Available	523	Open in IMG/M
3300009521\|Ga0116222_1423243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009523\|Ga0116221_1229332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300009523\|Ga0116221_1372825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300009524\|Ga0116225_1521301	Not Available	528	Open in IMG/M
3300009547\|Ga0116136_1022539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2036	Open in IMG/M
3300009549\|Ga0116137_1059872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1205	Open in IMG/M
3300009549\|Ga0116137_1105986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300009628\|Ga0116125_1116754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300009644\|Ga0116121_1254124	Not Available	563	Open in IMG/M
3300009698\|Ga0116216_10211011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1190	Open in IMG/M
3300009700\|Ga0116217_10458964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300009759\|Ga0116101_1125971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300009764\|Ga0116134_1299692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300009824\|Ga0116219_10146371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1369	Open in IMG/M
3300009824\|Ga0116219_10833446	Not Available	502	Open in IMG/M
3300009839\|Ga0116223_10669555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300010341\|Ga0074045_10304893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300010343\|Ga0074044_10202922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300010343\|Ga0074044_10488452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300010343\|Ga0074044_10525516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300010343\|Ga0074044_11021478	Not Available	542	Open in IMG/M
3300010379\|Ga0136449_102129379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300010379\|Ga0136449_102552736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300011038\|Ga0138547_148547	Not Available	531	Open in IMG/M
3300011065\|Ga0138533_1020840	Not Available	558	Open in IMG/M
3300011271\|Ga0137393_11727309	Not Available	514	Open in IMG/M
3300012199\|Ga0137383_10740132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300012200\|Ga0137382_10866315	Not Available	651	Open in IMG/M
3300012582\|Ga0137358_11041536	Not Available	526	Open in IMG/M
3300012917\|Ga0137395_10002673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8661	Open in IMG/M
3300014156\|Ga0181518_10547498	Not Available	544	Open in IMG/M
3300014159\|Ga0181530_10257264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300014162\|Ga0181538_10152052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300014162\|Ga0181538_10660238	Not Available	543	Open in IMG/M
3300014491\|Ga0182014_10383208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300014491\|Ga0182014_10387972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300014491\|Ga0182014_10602781	Not Available	530	Open in IMG/M
3300014498\|Ga0182019_10237247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300014638\|Ga0181536_10381159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300014654\|Ga0181525_10820095	Not Available	526	Open in IMG/M
3300015264\|Ga0137403_11264458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300017931\|Ga0187877_1132858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300017933\|Ga0187801_10175300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300017934\|Ga0187803_10179651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300017934\|Ga0187803_10297144	Not Available	644	Open in IMG/M
3300017940\|Ga0187853_10400687	Not Available	607	Open in IMG/M
3300017941\|Ga0187850_10182947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	967	Open in IMG/M
3300017955\|Ga0187817_10188738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313	Open in IMG/M
3300018006\|Ga0187804_10507218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300018009\|Ga0187884_10213600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300018012\|Ga0187810_10125219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300018016\|Ga0187880_1444751	Not Available	537	Open in IMG/M
3300018020\|Ga0187861_10048434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2234	Open in IMG/M
3300018020\|Ga0187861_10127339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300018024\|Ga0187881_10245043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300018030\|Ga0187869_10270822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300018033\|Ga0187867_10761955	Not Available	526	Open in IMG/M
3300018033\|Ga0187867_10795123	Not Available	513	Open in IMG/M
3300018033\|Ga0187867_10807281	Not Available	508	Open in IMG/M
3300018034\|Ga0187863_10657470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300018042\|Ga0187871_10449866	Not Available	712	Open in IMG/M
3300018086\|Ga0187769_11168636	Not Available	582	Open in IMG/M
3300018088\|Ga0187771_10029381	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4173	Open in IMG/M
3300018090\|Ga0187770_10156916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1737	Open in IMG/M
3300018090\|Ga0187770_10488793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300019275\|Ga0187798_1193347	Not Available	526	Open in IMG/M
3300019284\|Ga0187797_1727200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300019787\|Ga0182031_1170330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300021433\|Ga0210391_10434925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300021433\|Ga0210391_11083469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300021474\|Ga0210390_10877940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300025474\|Ga0208479_1031859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300025477\|Ga0208192_1036146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300025507\|Ga0208188_1009310	All Organisms → cellular organisms → Bacteria	3267	Open in IMG/M
3300025576\|Ga0208820_1000882	All Organisms → cellular organisms → Bacteria	18529	Open in IMG/M
3300025612\|Ga0208691_1088792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300027546\|Ga0208984_1082295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300027625\|Ga0208044_1119023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300027696\|Ga0208696_1022309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2372	Open in IMG/M
3300027879\|Ga0209169_10314061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300027882\|Ga0209590_10712135	Not Available	642	Open in IMG/M
3300027889\|Ga0209380_10536030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300028748\|Ga0302156_10317400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300028759\|Ga0302224_10293959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300028765\|Ga0302198_10435295	Not Available	594	Open in IMG/M
3300028780\|Ga0302225_10528871	Not Available	549	Open in IMG/M
3300029907\|Ga0311329_10804340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300029954\|Ga0311331_11138326	Not Available	664	Open in IMG/M
3300030011\|Ga0302270_10554735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300030047\|Ga0302286_10559317	Not Available	581	Open in IMG/M
3300030518\|Ga0302275_10083355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2212	Open in IMG/M
3300030707\|Ga0310038_10037813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2816	Open in IMG/M
3300031247\|Ga0265340_10177912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300031250\|Ga0265331_10503956	Not Available	545	Open in IMG/M
3300031259\|Ga0302187_10536075	Not Available	531	Open in IMG/M
3300031711\|Ga0265314_10167291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1331	Open in IMG/M
3300031823\|Ga0307478_11648638	Not Available	529	Open in IMG/M
3300032160\|Ga0311301_10528920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1734	Open in IMG/M
3300032828\|Ga0335080_10223341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2065	Open in IMG/M
3300033405\|Ga0326727_10385086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1300	Open in IMG/M
3300033982\|Ga0371487_0149367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.39%
Host-Associated	Host-Associated	2.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.39%
Aquatic	Environmental → Aquatic	40.00%
Plants	Host-Associated → Plants	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.96%
Freshwater	Environmental → Aquatic → Freshwater	37.39%
Peat	Environmental → Terrestrial → Peat	10.43%
Sediment	Environmental → Aquatic → Sediment	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	37.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.43%
Loam	Environmental → Terrestrial → Soil → Loam	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.22%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.09%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.22%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.22%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.35%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.48%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.61%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.87%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011038	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 28 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011065	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_GZOS_CLC_00966610	2124908035	Soil	SEMMQILTADQKAKLAQFEAKHEARMGKHMAPPPAD
Ga0062385_109146471	3300004080	Bog Forest Soil	QNSQTMIQLQVEHERVKSEIMAILTPEQKAKLAQIEAEHESRMSKHAPPPAD*
Ga0062384_1003897901	3300004082	Bog Forest Soil	RIKSEIMQILTPEQKTKLAQIEANHEARMQKHAPPPAEQ*
Ga0062389_1024333461	3300004092	Bog Forest Soil	QNAQTMIEMQVQHARIKSEMMQVLTADQKTKLTQLEAQHEGHMHGHMKDHGDPPPSD*
Ga0062389_1043822982	3300004092	Bog Forest Soil	MIELQVQHARIKSEMMQVLTADQKTKLQQLEAEHETNMRSHIQKDQEPPTSD*
Ga0062389_1048019232	3300004092	Bog Forest Soil	VAHERIKSEITQILTPDQKTKLAQLEAQHESRMSKHTAPPAPEE*
Ga0066690_101264271	3300005177	Soil	ATQHAQTMIEAEVQHARIKSEMVQVLTADQKTKLAQFEAKHQEHMQEHMKEHMGSKSD*
Ga0070764_104039622	3300005712	Soil	LQVAHARIKSEMVQILTPDQKTKLTEFESKHEGHMGERMSPPPSD*
Ga0070766_104046681	3300005921	Soil	EAKTRALATQNSQTMVELQVEHARIKSEIMQILTPDQKAKLAQIEANHEARMSKHAPPPSTD*
Ga0075029_1006954952	3300006052	Watersheds	KTRALATRGSQTMIEMQVQHARIKAEMMQVLTADQKAKFAQFEAKRESHMKEHMGPPPAD
Ga0075030_1003351043	3300006162	Watersheds	QNSQTMIELQVAHARIKSEIMQILTADQKAKLAQMEANHEAHMQKHMGPPPED*
Ga0075021_111725212	3300006354	Watersheds	ELIVQKARIQAELMQVLTADQKAKLQQLRAKHEARMKEHMPPEPPSD*
Ga0066793_104482101	3300009029	Prmafrost Soil	VKTRALATQNAQTMIEMQVQHARIKSEMVQVLTADQKAKLAAFEAKHESHMGKHMAPPPAD*
Ga0116108_12458691	3300009519	Peatland	RALVTQNSQAMIELQVEHARIKSEIMQILTADQKAKLAQLEANRAAHMSKHTPPPPAN*
Ga0116222_14232431	3300009521	Peatlands Soil	TQNSQTMIELQVEHARIKSEIMQILTADQKAKLAQLEANRAARMSKHTPPPPAD*
Ga0116221_12293321	3300009523	Peatlands Soil	KTRALATQNAQTMVELQVEHARIKSEIMQILTADQKAKLAQIEANRAAHMSKHTAPPPAD
Ga0116221_13728252	3300009523	Peatlands Soil	QTMIELQVEHARIKSEIMQILTADQKAKLAQLEANRAAHMSKHTPPPPAN*
Ga0116225_15213012	3300009524	Peatlands Soil	LQVAHARLKSEIMQILTADQKTKLAQIEAQRDARMQEHMKSHMPPPPAD*
Ga0116136_10225391	3300009547	Peatland	LATQNAQTMIELQVQHARIKSEMMQVLTADQKTKLAEFEAKRDARMSKHMPPPPED*
Ga0116137_10598722	3300009549	Peatland	ELQVQHARIKSEMMQVLTADQKTKLAEFEAKRDARMSKHMPPPPED*
Ga0116137_11059861	3300009549	Peatland	TMVELQVEHERMKSEIMQILTPDQKTKLAEIEANHEAHTSKHAPPPAD*
Ga0116125_11167542	3300009628	Peatland	IDLQVEHERIKSEIMQILTADQKTKLAQIEASHAARMSQHQASPSN*
Ga0116121_12541242	3300009644	Peatland	LATQNSQTMIELQVEHERMKSEIMQILTPDQKTKLAQLEAAHEANMGKHSPPPEE*
Ga0116216_102110112	3300009698	Peatlands Soil	HARIKSEIMQILTADQKAKLAQLEANRAARMSKHTPPPPAD*
Ga0116217_104589641	3300009700	Peatlands Soil	FDEAKTRALATQNAQTMVELQVEHARIKSEIMQILTADQKAKLAQIEANRAAHMSKHTAPPPAD*
Ga0116101_11259711	3300009759	Peatland	SMIELQVEDECMKAEIMQTLTRDQKTKLAQLEAAHEANMGKHSPPPEE*
Ga0116134_12996922	3300009764	Peatland	QNSQTMIQLQVEHARIKSEIMQILTGEQKAKLAQMEANREARMSKHTPPPPAD*
Ga0116219_101463711	3300009824	Peatlands Soil	MIELQVEHARIKSEIMQILTADQKAKLAQLEANRAARMSKHTPPPPAD*
Ga0116219_108334461	3300009824	Peatlands Soil	HARMKSEIMQILTADQKAKLAQLEASHEANMGKHAPPPED*
Ga0116223_106695551	3300009839	Peatlands Soil	LQVEHARIKSEIMQILTADQKAKLAQLEANRAAHMSKHTPPPPAN*
Ga0074045_103048931	3300010341	Bog Forest Soil	HARMKSEIMQILTPDQKAKLAQIEANKEARMQEHMKNHTSPPPAD*
Ga0074044_102029222	3300010343	Bog Forest Soil	RALATQNSQTMVELQVEHARIKSEIMQILTPDQKAKLAQIEANRASHMGKHAPPPAAD*
Ga0074044_104884522	3300010343	Bog Forest Soil	VEHARIKSEIMQILTADQKAKLAQLEANRAAHMSKHTPPPPAD*
Ga0074044_105255162	3300010343	Bog Forest Soil	VEHARIKSEIMQILTADQKAKLAQLEANRAAHMSKHTPPPPAN*
Ga0074044_110214782	3300010343	Bog Forest Soil	ATQNAQTMIQLQVEHARIKSEIMQILTAEQKAKLAQLEANREARMSKHTPPPPEN*
Ga0136449_1021293791	3300010379	Peatlands Soil	TMIELQVQHARIKSEMMQVLTADQKAKFAQFEARKEARMSKHMAPRPAD*
Ga0136449_1025527362	3300010379	Peatlands Soil	DEAKTRALATQNAQTMIELQVQHARIKSEIMQILTPDQKAKMAQIEAQHEAHMGHMKDHMAPPPAD*
Ga0138547_1485472	3300011038	Peatlands Soil	MIELQVEHARIKSEIMQILTADQKAKLAQMEANHEARMSKHMPPPPTN*
Ga0138533_10208402	3300011065	Peatlands Soil	MIELQVEHARIKSEIMQILTPDQKAKLAQIEAGREAHMNKHMAPPPAQ*
Ga0137393_117273092	3300011271	Vadose Zone Soil	VQHARIKSEMVQILTADQKAKLTEIEAKHEARMGHMKDHMAPPPED*
Ga0137383_107401322	3300012199	Vadose Zone Soil	QHAQTVIEVEVQHARIKSEMVQVLTADQKAKLAQFEAKHQEHMQEHMKEHMGSNSD*
Ga0137382_108663152	3300012200	Vadose Zone Soil	TQHAQTMIEVEVQHARVKSEMVQVLTADQKTKLAQFEAKHQEHMQEHMKEHLGSKSD*
Ga0137358_110415361	3300012582	Vadose Zone Soil	QHAQTMIEVEVQHARIKSEMVQVLTADQKAKLAQFEARHQEHMQEHMKEHMGSNSD*
Ga0137395_100026731	3300012917	Vadose Zone Soil	AATMIEMQVQHARIKSDMMQFLTADQKAKLAQFEAKHESHMGKHMGAPPAD*
Ga0181518_105474983	3300014156	Bog	ELQVEHERMKSEIMQILTPDQKTKLAEIEANHEARMSKHAPPPAD*
Ga0181530_102572641	3300014159	Bog	QVEHARIKSEIMQILTADQKTKLAQIEADREARMSKHAPPPPAD*
Ga0181538_101520521	3300014162	Bog	ARIKSEIMQILTAEQKAKLAQLEANREARMSKHMAPPPAD*
Ga0181538_106602381	3300014162	Bog	ARIKSEIMQILTAEQKAKLAQLEANREARMSKHTPPPPAD*
Ga0182014_103832082	3300014491	Bog	VEHARIKSEIMQILTADQKTKLAEFEAKRDARMSKHMPPPPED*
Ga0182014_103879722	3300014491	Bog	ALATQNSETMVELQVEHARIKSEIMQILTADQKAKLAQIEANREARMSKHAPPPAD*
Ga0182014_106027812	3300014491	Bog	ALATQNSETMVELQVEHARIKSEIMQILTADQKAKLAQIEANREARMSKHAPPPSD*
Ga0182019_102372472	3300014498	Fen	RIKSEIMQILTADQKTKLAQIEANREARMKEHMPPPPED*
Ga0181536_103811593	3300014638	Bog	RTLATQNSQTMVELQVEHERMKSEIMQILTPDQKTKLAEIEANHEARMSKHAPPPAD*
Ga0181525_108200951	3300014654	Bog	TALATQNSQTVIQLEVEHERIKSEILQILTPDQKAKLAQIEANHAARMGKSGPPPSSD*
Ga0137403_112644583	3300015264	Vadose Zone Soil	ATSHAQTMIEVEVQHARVKSELMQILTADQKTKLAQFEAKHEARMHEHMAPPPAD*
Ga0187877_11328581	3300017931	Peatland	FDEAKTRALVTQNSQAMIELQVEHARIKSEIMQILTADQKAKLAQLEANRAAHMSKHTPPPPAN
Ga0187801_101753001	3300017933	Freshwater Sediment	QTMIELQVQHARIKSEMVQVLTADQKTKLQQFEAKREARMKNHMPPPPPND
Ga0187803_101796511	3300017934	Freshwater Sediment	EMMQVLTADQKAKFAQFEAKREARRQKHMAPPPAD
Ga0187803_102971441	3300017934	Freshwater Sediment	TMIELQVEHARIKSEIMQILTADQKAKLAQLEANREARMSKHAPPPPTD
Ga0187853_104006871	3300017940	Peatland	LRMPTKSEIMQILTPDQKAKLAQIEANKEARMQEHMKSHTPPPPAD
Ga0187850_101829471	3300017941	Peatland	NSQTMIQLQVEHERIKSEIMQILTADQKAKLTQIQANRAARMSQHAPPPAD
Ga0187817_101887381	3300017955	Freshwater Sediment	QVEHARIKSEIMQILTADQKAKLAQMEANREARMSKHASPPPAD
Ga0187804_105072181	3300018006	Freshwater Sediment	IKSEIMQILTADQKAKLAQMEANREARVSKHAPTPPAD
Ga0187884_102136001	3300018009	Peatland	IQLQVEHARIKSEIMRILTADQKAKLAQMEANREARMSKHTPPPPAN
Ga0187810_101252191	3300018012	Freshwater Sediment	EIMQILTADQKAKLAQMEANREARVSKHAPTPPAD
Ga0187880_14447511	3300018016	Peatland	SETMVELQVEHARIKSEIMQILTADQKAKLAQIEANREARMSKHAPPPAD
Ga0187861_100484341	3300018020	Peatland	FDEAKTRALATQNSQTMIELQVEHARIKSEIVQILTADQKAKLAQIKANREARMSKHAPPPPAD
Ga0187861_101273392	3300018020	Peatland	PFDEAKTRALVTQNSQTMIELQVEHARIKSEIMQILTADQKAKLAQLEANRAAHISKHAAPPPAN
Ga0187881_102450432	3300018024	Peatland	SFDEAKTRALATQNSQTMIELQVEHARIKSEIMQILTADQKAKLAQIEANRETRMNKHMARPPAD
Ga0187869_102708221	3300018030	Peatland	KTRALATQNSQTMIELQVEHARIKSEIMQILTADQKAKLAQIEANRETRMNKHMARPPAD
Ga0187867_107619552	3300018033	Peatland	QTMIQLQVEHARIKSEIMQILTADQKAKLVQLEANREARMSKHMAPPPAD
Ga0187867_107951231	3300018033	Peatland	TQNSQTMIQLQVEHARIKSEIMQILTGEQKAKLAQMEANREARMSKHTPPPPAD
Ga0187867_108072811	3300018033	Peatland	RIKSEIVQILTADQKAKLAQIEANREARMSKHAPPPAD
Ga0187863_106574701	3300018034	Peatland	IKSEIMQILTADQKTKLAQIEASHAARMSQHQASPSN
Ga0187871_104498661	3300018042	Peatland	AQTMIELQVQHARIKSEMMQILTADQRTKLQQLEAQHGAHMKNRMPPAPPSD
Ga0187769_111686362	3300018086	Tropical Peatland	KALQASGPFDEAKTRALATQNSQTMVELQVQHERIKSEIMQILTADQKAKLAQLEASHEANMRKHGPPPED
Ga0187771_100293813	3300018088	Tropical Peatland	ARIKSEMMQVLTPDQKTKLQQIEAKHEARWQKHTQTPPESPSN
Ga0187770_101569161	3300018090	Tropical Peatland	KATALATQNSQTMIQLQVAHARIKSEMMQVLTPDQKTKLQQIEAKHEARWQKHTQTPPESPSN
Ga0187770_104887931	3300018090	Tropical Peatland	AQTMIELQVEHARIKSEIMQILTADQKAKLAQMEANREARMSKHAPPPPAD
Ga0187798_11933472	3300019275	Peatland	ARIKSEMLQVLTADQKSKYQQIEAKHEARMKNHMPPPPPND
Ga0187797_17272001	3300019284	Peatland	QTMIELQVQHARIKSEMMQVLTADQKTKLQQFEAKHEARMKDHMPPAPPND
Ga0182031_11703302	3300019787	Bog	TRALATQNSQTMIEMEVAHARIRSEIVQILTPDQKTKLAQLEASHESDMGKHGGKHGPPPPEN
Ga0210391_104349251	3300021433	Soil	IQLEVEHQRIKSEILQILTADQKTKLAQIEANHAAHMGRAPAPPPAD
Ga0210391_110834691	3300021433	Soil	KTRALATQNSQTMVELQVAHERIKSEIMQVLTPDQKTKLAQLESQHEARMSKHTAQPAPE
Ga0210390_108779402	3300021474	Soil	KSEIMQVVTPDQKTKLAQLEAQHEARMSKHTAQPASEE
Ga0208479_10318591	3300025474	Arctic Peat Soil	EMMQILTADQKAKLAQIEAKHEAHMGKHMPPPPTD
Ga0208192_10361462	3300025477	Peatland	AKTRALATQNSQTMIELQVEHARIKSEIVQILTADQKAKLAQIKANREARMSKHAPPPPA
Ga0208188_10093104	3300025507	Peatland	TRTLATQNSQTMVELQVEHERMKSEIMQILTPDQKTKLAEIEANHEAHTSKHAPPPAD
Ga0208820_10008821	3300025576	Peatland	IKSEIVQILTADQKAKLAQIKANREARMSKHAPPPPAD
Ga0208691_10887921	3300025612	Peatland	TQNAQTMIDLQVEHERIKSEIMQILTADQKTKLAQIEASHAARMSQHQASPSN
Ga0208984_10822951	3300027546	Forest Soil	TQNAQNMIEMQVQHARIKSEMMQVLTADQKAKLATIEAKHESHMQEHMANHSSD
Ga0208044_11190231	3300027625	Peatlands Soil	QVQHARIKSEMMQVLTADQKAKLAEFEAKKEARMGKHMTPPPAN
Ga0208696_10223092	3300027696	Peatlands Soil	VTQNSQTMIELQVEHARIKSEIMQILTADQKAKLAQLEANRAARMSKHTPPPPAD
Ga0209169_103140611	3300027879	Soil	QTMIELQVAHARIKSEMVQILTPDQKTKLTEFESKHEGHMGERMSPPPSD
Ga0209590_107121351	3300027882	Vadose Zone Soil	EAKTRSLATQHAQTMIEVEVQHARVKSEMVQVLTADQKAKLAQFEAKHQEHMQEHMKEHMGSNSD
Ga0209380_105360302	3300027889	Soil	QVEHARIKSEIMQILTPDQKAKLAQIEANHEARMSKHAPPPSTD
Ga0302156_103174001	3300028748	Bog	QTQIELEVQHARIKAEMMQVLTADQKTKLASFEAKHEARMKDHAPAPPAD
Ga0302224_102939593	3300028759	Palsa	EIMQILTPEQKTKLAQIEANHAAHMSQHAPPPPAD
Ga0302198_104352951	3300028765	Bog	QTQIELEVQHARIKAEMMQVLTADQKTKLANFEAKREARMKQKAPPAPPAD
Ga0302225_105288711	3300028780	Palsa	MVELEVEHSRIKSEIMQILTPEQKTKLAQIEANHAAHMSQHAPPPPAD
Ga0311329_108043401	3300029907	Bog	QTQIELEVQHARIKAEMMQVLTADQKTKLASFEAKHEARMKDHAPPPPAD
Ga0311331_111383261	3300029954	Bog	TMVELQVEHERIKSEIMQILTPDQKAKLAQIEASHAANMSKHAPPPAD
Ga0302270_105547352	3300030011	Bog	QHARIKAEMMQVLTADQKTKLASFEAKHEARMKDHAPPPPAD
Ga0302286_105593171	3300030047	Fen	TRVIATQNAQTMIEVQVQHARIKNEMMQVLTADQKTKLQQFEAKREAHMKGKMAPPPED
Ga0302275_100833551	3300030518	Bog	EVQHARIKAEMMQVLTADQKTKLANFEAKREARMKEHAPPPPAD
Ga0310038_100378131	3300030707	Peatlands Soil	RIKSEIMQILTADQKAKLAQLEANRAARMSKHTPPPPAD
Ga0265340_101779122	3300031247	Rhizosphere	ELQVQHARIKAEMIQVLTADQKAKLAQFEAKKEARMKDHMAPPPED
Ga0265331_105039561	3300031250	Rhizosphere	QNAQTMIELQVQHARIKAEMIQVLTADQKTKLAQFEAKKEARMKDHMAPPPED
Ga0302187_105360752	3300031259	Bog	LEVQHARIKAEMMQVLTADQKTKLANFEAKREARMKQKAPPAPPAD
Ga0265314_101672912	3300031711	Rhizosphere	SEMMQLLTADQKAKFAEMQAKHEAHMKNHMAPPPAD
Ga0307478_116486382	3300031823	Hardwood Forest Soil	FDENKTRALATQNAQTMIDLQVEHERIKSEIMQILTPDQKTKLAQIEANHEAHMSKHQAPPSN
Ga0311301_105289201	3300032160	Peatlands Soil	TQNSQTMIELQVEHARIKSEIMQILTADQKAKLAQLEANRAAHMSKHTPPPPAN
Ga0335080_102233412	3300032828	Soil	MVQKARIHSEMMQVLTADQKTKLAALKAKHEARWKAHTAPEPPSD
Ga0326727_103850861	3300033405	Peat Soil	TMIELQVQHARIKSEIMQVLTADQKTKLAQIEANREARMSKHVPPPPED
Ga0371487_0149367_1012_1161	3300033982	Peat Soil	MIELQVEHARIKSEIMQILTADQKTKLAQIEADHAANMSKHAPPPPPED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080129

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences