Metagenome Family F080114

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080114
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	65 residues
Representative Sequence	SLENFILAKNWSQDPIFVVTSFLSILSMSSEFSTGHAFHLFKLIFSVVTSFVILSEEKISKK
Number of Associated Samples	60
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.82 %
% of genes near scaffold ends (potentially truncated)	90.43 %
% of genes from short scaffolds (< 2000 bps)	97.39 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (98.261 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (86.087 % of family members)
Environment Ontology (ENVO)	Unclassified (86.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (86.957 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.89% β-sheet: 0.00% Coil/Unstructured: 41.11%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.26 %
All Organisms	root	All Organisms	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.26 %
cellular organisms	root	All Organisms → cellular organisms	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.26 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.26 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.26 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.26 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.26 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005334\|Ga0068869_100556056	Not Available	964	Open in IMG/M
3300005338\|Ga0068868_101901727	Not Available	563	Open in IMG/M
3300005338\|Ga0068868_102057869	Not Available	542	Open in IMG/M
3300005356\|Ga0070674_101211163	Not Available	671	Open in IMG/M
3300005614\|Ga0068856_102452268	Not Available	529	Open in IMG/M
3300006358\|Ga0068871_100674023	Not Available	946	Open in IMG/M
3300006358\|Ga0068871_100985109	Not Available	784	Open in IMG/M
3300009036\|Ga0105244_10564591	Not Available	523	Open in IMG/M
3300013296\|Ga0157374_10961936	Not Available	873	Open in IMG/M
3300013296\|Ga0157374_12014955	Not Available	604	Open in IMG/M
3300013296\|Ga0157374_12340986	Not Available	561	Open in IMG/M
3300013296\|Ga0157374_12929546	Not Available	504	Open in IMG/M
3300013297\|Ga0157378_11403286	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	741	Open in IMG/M
3300014745\|Ga0157377_11568787	Not Available	526	Open in IMG/M
3300015267\|Ga0182122_1018087	Not Available	734	Open in IMG/M
3300015267\|Ga0182122_1031195	Not Available	636	Open in IMG/M
3300015267\|Ga0182122_1038522	Not Available	601	Open in IMG/M
3300015267\|Ga0182122_1039355	Not Available	597	Open in IMG/M
3300015268\|Ga0182154_1031339	Not Available	639	Open in IMG/M
3300015268\|Ga0182154_1053571	Not Available	552	Open in IMG/M
3300015269\|Ga0182113_1036314	Not Available	676	Open in IMG/M
3300015275\|Ga0182172_1046957	Not Available	582	Open in IMG/M
3300015276\|Ga0182170_1006229	Not Available	1003	Open in IMG/M
3300015276\|Ga0182170_1061848	Not Available	538	Open in IMG/M
3300015277\|Ga0182128_1026589	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	687	Open in IMG/M
3300015279\|Ga0182174_1055081	Not Available	576	Open in IMG/M
3300015279\|Ga0182174_1083471	Not Available	506	Open in IMG/M
3300015281\|Ga0182160_1006695	Not Available	1012	Open in IMG/M
3300015282\|Ga0182124_1038931	Not Available	624	Open in IMG/M
3300015282\|Ga0182124_1042343	Not Available	611	Open in IMG/M
3300015286\|Ga0182176_1061245	Not Available	560	Open in IMG/M
3300015289\|Ga0182138_1033764	Not Available	666	Open in IMG/M
3300015289\|Ga0182138_1072012	Not Available	537	Open in IMG/M
3300015291\|Ga0182125_1014464	Not Available	858	Open in IMG/M
3300015291\|Ga0182125_1071827	Not Available	547	Open in IMG/M
3300015294\|Ga0182126_1033098	Not Available	687	Open in IMG/M
3300015296\|Ga0182157_1070698	Not Available	565	Open in IMG/M
3300015298\|Ga0182106_1063301	Not Available	584	Open in IMG/M
3300015299\|Ga0182107_1059946	Not Available	597	Open in IMG/M
3300015300\|Ga0182108_1009820	Not Available	1007	Open in IMG/M
3300015300\|Ga0182108_1084790	Not Available	541	Open in IMG/M
3300015300\|Ga0182108_1105603	Not Available	504	Open in IMG/M
3300015302\|Ga0182143_1065566	Not Available	581	Open in IMG/M
3300015302\|Ga0182143_1102249	Not Available	506	Open in IMG/M
3300015304\|Ga0182112_1044908	Not Available	650	Open in IMG/M
3300015304\|Ga0182112_1100128	Not Available	511	Open in IMG/M
3300015305\|Ga0182158_1065614	Not Available	580	Open in IMG/M
3300015305\|Ga0182158_1100423	Not Available	509	Open in IMG/M
3300015308\|Ga0182142_1086171	Not Available	551	Open in IMG/M
3300015321\|Ga0182127_1074546	Not Available	593	Open in IMG/M
3300015323\|Ga0182129_1053364	Not Available	636	Open in IMG/M
3300015323\|Ga0182129_1088320	Not Available	547	Open in IMG/M
3300015323\|Ga0182129_1100597	Not Available	526	Open in IMG/M
3300015323\|Ga0182129_1115944	Not Available	502	Open in IMG/M
3300015341\|Ga0182187_1043883	Not Available	854	Open in IMG/M
3300015341\|Ga0182187_1061580	Not Available	763	Open in IMG/M
3300015342\|Ga0182109_1169708	Not Available	559	Open in IMG/M
3300015343\|Ga0182155_1209748	Not Available	516	Open in IMG/M
3300015343\|Ga0182155_1212941	Not Available	513	Open in IMG/M
3300015344\|Ga0182189_1012950	Not Available	1340	Open in IMG/M
3300015344\|Ga0182189_1059782	Not Available	822	Open in IMG/M
3300015344\|Ga0182189_1178411	Not Available	553	Open in IMG/M
3300015344\|Ga0182189_1182252	Not Available	549	Open in IMG/M
3300015344\|Ga0182189_1195900	Not Available	534	Open in IMG/M
3300015346\|Ga0182139_1182611	Not Available	565	Open in IMG/M
3300015346\|Ga0182139_1202102	Not Available	542	Open in IMG/M
3300015347\|Ga0182177_1060982	Not Available	853	Open in IMG/M
3300015347\|Ga0182177_1078837	Not Available	776	Open in IMG/M
3300015347\|Ga0182177_1230085	Not Available	518	Open in IMG/M
3300015351\|Ga0182161_1141758	Not Available	648	Open in IMG/M
3300015355\|Ga0182159_1216955	Not Available	621	Open in IMG/M
3300015355\|Ga0182159_1252300	Not Available	581	Open in IMG/M
3300015355\|Ga0182159_1320582	Not Available	523	Open in IMG/M
3300015355\|Ga0182159_1342823	Not Available	508	Open in IMG/M
3300015361\|Ga0182145_1093750	Not Available	642	Open in IMG/M
3300017404\|Ga0182203_1136412	Not Available	534	Open in IMG/M
3300017409\|Ga0182204_1024254	Not Available	808	Open in IMG/M
3300017411\|Ga0182208_1028657	Not Available	793	Open in IMG/M
3300017411\|Ga0182208_1101444	Not Available	543	Open in IMG/M
3300017411\|Ga0182208_1110577	Not Available	529	Open in IMG/M
3300017413\|Ga0182222_1042694	Not Available	641	Open in IMG/M
3300017413\|Ga0182222_1099823	Not Available	513	Open in IMG/M
3300017420\|Ga0182228_1060407	Not Available	664	Open in IMG/M
3300017424\|Ga0182219_1101137	Not Available	558	Open in IMG/M
3300017424\|Ga0182219_1101343	Not Available	557	Open in IMG/M
3300017425\|Ga0182224_1028751	Not Available	865	Open in IMG/M
3300017425\|Ga0182224_1082477	Not Available	629	Open in IMG/M
3300017425\|Ga0182224_1126618	Not Available	549	Open in IMG/M
3300017425\|Ga0182224_1154884	Not Available	513	Open in IMG/M
3300017427\|Ga0182190_1045187	Not Available	779	Open in IMG/M
3300017427\|Ga0182190_1119803	Not Available	562	Open in IMG/M
3300017427\|Ga0182190_1147760	Not Available	522	Open in IMG/M
3300017430\|Ga0182192_1086246	Not Available	641	Open in IMG/M
3300017433\|Ga0182206_1041550	Not Available	769	Open in IMG/M
3300017433\|Ga0182206_1089020	Not Available	606	Open in IMG/M
3300017433\|Ga0182206_1115704	Not Available	558	Open in IMG/M
3300017436\|Ga0182209_1067961	Not Available	680	Open in IMG/M
3300017436\|Ga0182209_1118144	Not Available	571	Open in IMG/M
3300017436\|Ga0182209_1150532	Not Available	527	Open in IMG/M
3300017436\|Ga0182209_1161157	Not Available	515	Open in IMG/M
3300017438\|Ga0182191_1058239	Not Available	736	Open in IMG/M
3300017443\|Ga0182193_1089936	Not Available	659	Open in IMG/M
3300017443\|Ga0182193_1101605	Not Available	633	Open in IMG/M
3300017443\|Ga0182193_1158032	Not Available	544	Open in IMG/M
3300017683\|Ga0182218_1086774	Not Available	601	Open in IMG/M
3300017683\|Ga0182218_1132711	Not Available	526	Open in IMG/M
3300017684\|Ga0182225_1061635	Not Available	654	Open in IMG/M
3300017689\|Ga0182231_1076604	Not Available	636	Open in IMG/M
3300017689\|Ga0182231_1114243	Not Available	526	Open in IMG/M
3300017690\|Ga0182223_1089353	Not Available	552	Open in IMG/M
3300021060\|Ga0182232_1072984	Not Available	559	Open in IMG/M
3300025908\|Ga0207643_10930087	Not Available	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	86.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.35%
Roots	Host-Associated → Plants → Roots	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	86.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	86.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	86.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015305	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068869_1005560561	3300005334	Miscanthus Rhizosphere	VKQLGLKNFILAKNWSKDPLFVVTSFLSILSMSYEFSTGHAFHLFKLIFFVVTSFVLLSEEKISKK*
Ga0068868_1019017271	3300005338	Miscanthus Rhizosphere	RGAKVKQPGSKNFILAKNCSKDPLFVVTSFLSILSTSYQFSTGHAFHLFKLIFFVVTSFVLLSEEKISKK*
Ga0068868_1020578692	3300005338	Miscanthus Rhizosphere	VKQPGSKNFILAKNCSKDPLFVVTSFLSILSASYQFSTGHAFHLFKLIFFVVTSFVLLSEEKISKK*
Ga0070674_1012111632	3300005356	Miscanthus Rhizosphere	MFVGFENFRLVKKWSQDHLFVVTRFLSILSKFSENSTGHVFHLFKLIFSVVTSFVLLSEE
Ga0068856_1024522682	3300005614	Corn Rhizosphere	VKQPGLKNFILAKNWSKDPLFVVTSFWSILSMSYEFSTGHAFHLFKLIFFVVTSFVLLSEEKISKK*
Ga0068871_1006740231	3300006358	Miscanthus Rhizosphere	DTYSALLGLKNFISAKNWSQDPIFVVTSFLSILSTSSEFSIGHAYHLLKLIFSMVTSFVILTEEKI*
Ga0068871_1009851092	3300006358	Miscanthus Rhizosphere	VKQPDSKFFILAKNWSKDPIFVVTSFMSILSMSYEFSTGHAFHLFKLIFFMVTSFVLLSEEKNQRNKMKK
Ga0105244_105645911	3300009036	Miscanthus Rhizosphere	EIFILVKKWSQDPLFVVTRFLSILSTSSEIFTGHAFHLFKLIFSVVTSFVLLSEEKISKK
Ga0157374_109619361	3300013296	Miscanthus Rhizosphere	VKQPGLKNFILAKNWSKDPLFVVTSFLLILSMSYEFSTGHAFHLFKLIFSVVTSFVLLSEEKISKK*
Ga0157374_120149551	3300013296	Miscanthus Rhizosphere	VDKNKTKKRGAKVKQPGSKNFILAKNWSRDPLFVVTSFLPILSTSFEFSTSHAFHLFKLIFSVVTFLCS*
Ga0157374_123409861	3300013296	Miscanthus Rhizosphere	LGSENFILAKNLSQDPISVVTNFLSILSTSSEFSTGHAFHLFNLIFSMVTSFVVLSEEKISKK*
Ga0157374_129295462	3300013296	Miscanthus Rhizosphere	TYSALLGSENFILARNWSQDPIFVVSSFFSILSTSSEFSIGHAYPLFKLIFSVVTSFVLLSEEKISKK*
Ga0157378_114032861	3300013297	Miscanthus Rhizosphere	ALPGLENFILAKNWSLDPFFVVTSFLSILCSIFEFSTGHAFHLFKLIFSVVTSFALQSEKNQKKLK*
Ga0157377_115687871	3300014745	Miscanthus Rhizosphere	PASPGLENFILAKNWSQEPLFVVTSFLSILSTSFEFSTGHAFHLFKLIFSMVTSFVILSEEKISKK*
Ga0182122_10180871	3300015267	Miscanthus Phyllosphere	VKQPGSKNFILAKNWSRDPLFVITSFLSILSTSFEFSTGHAFHVFKIIFSVVTSFVHLSEEKIS
Ga0182122_10311951	3300015267	Miscanthus Phyllosphere	STSDAYSASPGSENFILAKNWSQDPLFVVTSFLSILSMSSKFSTSHAFHLFKLIFFVDTSFVLLNEEKYQK*
Ga0182122_10385221	3300015267	Miscanthus Phyllosphere	RDTYSALPGLKNFISAKNWSQDPIFVVTSFLSILRTSSKFSKGHAYHLFKLIFSMVTSFVLLSEEKISKK*
Ga0182122_10393551	3300015267	Miscanthus Phyllosphere	AKVKQPGSKNFILAKNWSRDPLFVVTSFLSILSTSFEFSTGHAFHLFKLIFSVVTSFVLQNEEKISKK*
Ga0182154_10313391	3300015268	Miscanthus Phyllosphere	KNFILAKNWSQHPIFVVTSFLTILSMSSEFSTGHSFHLFKHIFSMVTSLVLLSEEKISKNK*
Ga0182154_10535711	3300015268	Miscanthus Phyllosphere	VKQPDSKIFILAKNWSKDSIFVVTSFMSILSMSYEFSTGHAFHLFKLIFFVVTSFVLLSEEK
Ga0182113_10363143	3300015269	Miscanthus Phyllosphere	TWDTYLAPPGLENFILAKNWSYDPLFVVTRFLSILSMSSEFSTSHAFHLFKLIFSMVTSFVLLSE*
Ga0182172_10469572	3300015275	Miscanthus Phyllosphere	VPATKTSSRGIYSASLGSENFILAKNWAQDPLFVVTSFLSILSMTSEFSTGHGFHLFKLIFFVGTTFSLLSEEKI
Ga0182170_10062292	3300015276	Miscanthus Phyllosphere	LPGLENFILAKNWSQDPIFVVTSFLSILSTSSEFSTGHAFHLFKLIFFVVTSFVILSEEKISKIKRKSQRIPKKQ*
Ga0182170_10618481	3300015276	Miscanthus Phyllosphere	TRDTYSASPGSKFFILAKNWSQDLLFVVLSFLSLLSMSSKFSIGHSFHLFKLIFSVVTSFVLLSEEKVSKK*
Ga0182128_10265891	3300015277	Miscanthus Phyllosphere	ENFILAKNWSQDPLFVVTSFLSILSLIFEFSTGHAFHLFKLIFSVVTSFVLLSEKKS*
Ga0182174_10550811	3300015279	Miscanthus Phyllosphere	KNWSQDPLFVVTSFLSILSMSSEFSTGHAFHMFKLMFSMVTSFVLLSEEKYQKK*
Ga0182174_10834711	3300015279	Miscanthus Phyllosphere	MYSGYLFSNTGFRNFILAKNWSQDPLFVVISFLSILSTSSEFSTGHAFHLFKLIFSVVTSFVLLS
Ga0182160_10066951	3300015281	Miscanthus Phyllosphere	KKRGAKVKQPGSKNFILAKNWSRDPLFVVASFLQILSMSFEFSIGHAFHLCKLIFSVVTSFVLLSEEKI*
Ga0182124_10389311	3300015282	Miscanthus Phyllosphere	SLLGSKIFILTKNRSQDPIFVVVIFLSNSSTSSKFSTGHDFQLFKLIFSVVTSFVLLSEEKI*
Ga0182124_10423431	3300015282	Miscanthus Phyllosphere	ENFILAKNWSQDPLFVVTSFLSILSMIFEFSTGHAFHLFKLIFSMVTCFVLLSEEKISKK
Ga0182176_10612451	3300015286	Miscanthus Phyllosphere	LAKNWSQDPLFVVTSFLPILSTSPEFSIGHAFHLFKLIFSMVTSFVLLSEEKISKKKEEKSKNATKQ*
Ga0182138_10337641	3300015289	Miscanthus Phyllosphere	TRDTYSPLPGLENFIFAKSWSHDPIFMVTSFLLILSTYSEFSTGHAFHLFKLIFSVVTSFVLLSEEKIKKN*
Ga0182138_10720122	3300015289	Miscanthus Phyllosphere	VKQPGSKNFILAKNWSRNPLFVITSFLPILSTYFEFSTSHAFHLFKLIFSVVTSFVLLSEEKISK
Ga0182125_10144641	3300015291	Miscanthus Phyllosphere	NFILAKNWSQDPLFVVTSFLSILSMSSEFSTSHAFHLFMLIFFVDTSFVLLNEEKYQK*
Ga0182125_10718271	3300015291	Miscanthus Phyllosphere	IFSALPGSKNFILAKNWSQDPIFVVTSFLSILSMSSEFSTGHGFYLFKLIFSVVTSFVLLSEEYI*
Ga0182126_10330981	3300015294	Miscanthus Phyllosphere	KNWSQDPLFVVTSFLSILSMTSEFSTGHTFHLFKLIFSVVTSFVLLSEEKIPKK*
Ga0182157_10706982	3300015296	Miscanthus Phyllosphere	FILAKNWSKDPLFVVISFLSILSTSYELSIGHAFHLFKLIFSVVTSFLLLSEGKISKK*
Ga0182106_10633012	3300015298	Miscanthus Phyllosphere	VKQLGSKNFILAKNWSRDPLFMVTSFLPILSTSFEFSIGHAFHLFKLIFSVVTSFVLL
Ga0182107_10121421	3300015299	Miscanthus Phyllosphere	LAKKWSQDPLFVVTSFLSILSSIFEFSTGHAFHLFKLIFSVVTSFVLLSEKNQKKLKEKVKEYQKNNDSP
Ga0182107_10599461	3300015299	Miscanthus Phyllosphere	RGAKVKQPGSKNFILAKNCSKDPLFVVTSFLSILSASYQFSTGHAFHLFKLIFFVVTSFVLLSEEKISKK*
Ga0182108_10098201	3300015300	Miscanthus Phyllosphere	AKNWSQDPLFVVIGFLSILSMSSKFSTRHAFYLFKLIFSVVTSFVFLSEEKISKK*
Ga0182108_10847901	3300015300	Miscanthus Phyllosphere	TSTQGTYSTLLGLENFILAKNRSQDPLFVVTSFLSILSTTSEFSTGHAFHLFKLIFSMVTSFVLLSVEKISKK*
Ga0182108_11056031	3300015300	Miscanthus Phyllosphere	VGFKIFYFGKNWSQDPLFVVTSFLSILSMSSEFPTGHTFHLFKLIFSVVTSFVLLSEEKISKI*
Ga0182143_10655661	3300015302	Miscanthus Phyllosphere	KNFISGKNWSQDPIFVVTSFLSILSTSSEFSTSHAYHLFKLIFSMVTSFVILSEEKISKK
Ga0182143_11022492	3300015302	Miscanthus Phyllosphere	ENFILAKNWSQVPLFVVTSFLLILSTSSEFSTGHTIHLFKLIFSVVTSFVLLSEEKCKKIKR*
Ga0182112_10449081	3300015304	Miscanthus Phyllosphere	ASSDLEIFILAKNWSQDPLFVVIGFLSILSTSSKFSTRHAFYLFKLIFSVVTSFVFLSEEKISKK*
Ga0182112_11001282	3300015304	Miscanthus Phyllosphere	SASLGSENFILAKNLSQDPLFVVTSFLSNLSMFSEFSTSHVFHMFKLIFSVVTSFVLLSEEKISKK*
Ga0182158_10656142	3300015305	Miscanthus Phyllosphere	MGSKKFILDKNRPQDPIFVVTSFLSILSTSFEFSIGHAFHQFKLIFFVVTSFVLLSEEKISKNKKKKS
Ga0182158_11004231	3300015305	Miscanthus Phyllosphere	TYSASQGFENFNLAKNWSQDPLFVVTSFLSIMSTTSEFSTGHAFHLFKLIFSMVTTFVLLSEEKISKK*
Ga0182142_10861711	3300015308	Miscanthus Phyllosphere	GAKVKQPGSKNFILAKNWSRDPLFVVISFLPILSTSFEFSTGHAFHLFKLIFSLVTSFVLLSEEKISKK*
Ga0182127_10745461	3300015321	Miscanthus Phyllosphere	SASLGLKKIILDKNRSQDPLFVVTSFLSILSMTSEFSTSHAFHLFKLIFYMVTTFMLLGEEKISKK*
Ga0182129_10533641	3300015323	Miscanthus Phyllosphere	GLENFILAKNLSQDHIFVVTSFLSILSTSSEFSIGHAFHLFNLIFSMVTSFVL*
Ga0182129_10883202	3300015323	Miscanthus Phyllosphere	YSALSDLKIFILTKNRSQDPIFVVTIFLSNLSTSSKFSTGHDFHLLKLIFSMVTSFVLLSEEKI*
Ga0182129_11005971	3300015323	Miscanthus Phyllosphere	MTRDTYLASLGSEIFILAKNWSQDSLFVVTGFLSILSKSSEFSTGHAFHLFKLIFSMVTSFILLSEEKISKK*
Ga0182129_11159441	3300015323	Miscanthus Phyllosphere	SILAKNWSKDPLFVVTSFMSILSTSYEFSTGHTFYLFKLIFSMVTSFVLLSAEKISKK*
Ga0182187_10438831	3300015341	Miscanthus Phyllosphere	NFILAKNWSQDPLFVVTSFLSILSMSSEFSTSHAFHLFKLIFFVDTSFVLLNEEKYQK*
Ga0182187_10615801	3300015341	Miscanthus Phyllosphere	KRGAKVKQPGSKNFILAKNWSRDPLFVVTSFLPILSTPFEFSISHAFHLFKLIFSVVTSFVLLSEEKI*
Ga0182109_11697082	3300015342	Miscanthus Phyllosphere	YSASLGSENFILAKNWSQDPLFVVTSFLSILSTSSEFSTGHDFHLFKLIFSMVTTFVLLGEEKISKK*
Ga0182155_12097482	3300015343	Miscanthus Phyllosphere	LSGSKIFILTKNRSQDPIFVVTTFLSNSSTLSEFSIGHDFQLFKLIFSVVTSFVLLSEEKI*
Ga0182155_12129411	3300015343	Miscanthus Phyllosphere	KNFISGKNWSQDPIFVVTSFLSILSTSSEFSNGHAYHLFKLIFSMVTSFVLLSEEKISKKIERKSQRIPEKQ*
Ga0182189_10129501	3300015344	Miscanthus Phyllosphere	DTYLALPCSKNFILTKNRSQDPIFVVTIFLSNLSTSSKFSTGHAFHLFKLIFSVVTSFVLLSEEKIKKNLK*
Ga0182189_10597822	3300015344	Miscanthus Phyllosphere	SASSGLKIFILAKNWSQDHLFVVTSFLSILSMSSEFSIGHAFYLFKLIFFVVTSFVLLSEEKISNKEK*
Ga0182189_11784111	3300015344	Miscanthus Phyllosphere	VKQPGSKNFILAKNWSQDPIFVVTSFLSNLSMSSEFSTDHDFHLFEHIFFVVTYFVLLSEEKISKK*
Ga0182189_11822521	3300015344	Miscanthus Phyllosphere	SLENFILAKNWSQDPIFVVTSFLSILSMSSEFSTGHAFHLFKLIFSVVTSFVILSEEKISKK*
Ga0182189_11959001	3300015344	Miscanthus Phyllosphere	KNWSQDPIFVVTSFLSILSMSSEFSTGHAFYLFKLIFFVVTSFVLLSEEKILKN*
Ga0182139_11826111	3300015346	Miscanthus Phyllosphere	VKQPDSKIFILAKNWSKDSIFVVTSFMSILSTSYEFSTGHTFHLFKLIFSMVTSFVLLSE
Ga0182139_12021022	3300015346	Miscanthus Phyllosphere	SLGSENFILAKNWSQDPLFVVTSFLSILSTTSEFSTGHAFHLFKLIFFVGTTFFLQCEEKI*
Ga0182177_10609821	3300015347	Miscanthus Phyllosphere	APPGSENFILAKNWSQDHLFVVTSFLLILSMSSEFFTGYAFHLFTLIFSVVTSFVLLSEEKITKK*
Ga0182177_10788372	3300015347	Miscanthus Phyllosphere	SKIFILTKNRSQDPIFVVTIFLSNLSTSSEFSTGHDFHLFKLIFSMVTSFVLLSEEKI*
Ga0182177_12300851	3300015347	Miscanthus Phyllosphere	ALTGSENFILAKNWSQVPLFVVTSFLSILSTSSEFSTSHTFHLFKLIFSVVTSFVLLSEEKYQKIK*
Ga0182161_10970932	3300015351	Miscanthus Phyllosphere	LAAQDALPGFENFIFVKKWSQDPLFVVTRCLSILSKFSENSTGHVFHLFKLIFSVVTSFVLISKGKISKK*
Ga0182161_11417581	3300015351	Miscanthus Phyllosphere	PGLKNFISAKNWSQDPIFVVTSFLSILRTSPKFSKGHAYHLFKLIFSMVTSFVLLSEEKISKK*
Ga0182159_12169551	3300015355	Miscanthus Phyllosphere	DTYSALSAMENFILAKNWSEDPIFVVTSFLSILSTSFEFSTGNAFHLFKLIFSMVTSFVLLSEEKISKK*
Ga0182159_12523002	3300015355	Miscanthus Phyllosphere	YSALSSLENFILAKNWSQDPIFVVTHFLSILSTSFEFSTGHAFHLFKLIFSMGTSSMLLSEEKISKK*
Ga0182159_13205821	3300015355	Miscanthus Phyllosphere	ILAKNWSQVPLFVVTSFLLILSMSSEFSTGHTIHLFKLIFSVVTSFVLLSEEKCKKIKR*
Ga0182159_13428231	3300015355	Miscanthus Phyllosphere	DTYSASPGSKNFILAKNWYKDPLFVVLSFLSLLSTSSKFSTGHSFHLFKLIFSVVTSFVLLSEEKISKQ*
Ga0182145_10937503	3300015361	Miscanthus Phyllosphere	LKNFILAKNWSQDPLVMLTSFISILSMTSEFSTGHDFHLFKLIFSGVTPFVLLSEEKI*
Ga0182203_11364121	3300017404	Miscanthus Phyllosphere	GKNWSHDPIFVVTSFLSILSTSSEFSTGHAYHLFKLIFSMVTSFVLLSEEKMSKK
Ga0182204_10242542	3300017409	Miscanthus Phyllosphere	AKNWSKDPLFVVTSFLSILSMSYEFSIGHAFHLFKLIFSVVTSFVLLSEEKISKK
Ga0182204_10916481	3300017409	Miscanthus Phyllosphere	NGLAAQDALPGFKNFILVKKWSQDPLFVVTRFLSILSKSFENSAGHVFHLFKLIFSVVSSFVLLSKGKISKK
Ga0182208_10286571	3300017411	Miscanthus Phyllosphere	DTYLASSDLEIFILAKNWSQDPLFVVIGFLSILSTSSKFSTRHAFYLFKLIFSVVTSFVFLSEEKISKK
Ga0182208_11014441	3300017411	Miscanthus Phyllosphere	VKQLGSKNFILAKNWSRDPLFVVTSFLPILSTSFEFSIGHAFHLFKLIFSVVTS
Ga0182208_11105771	3300017411	Miscanthus Phyllosphere	ASLGLVNFILAKNRSQDPLFMVTSFLSILSKTSELSIGHAIHLFKLIFSMVTTFVLLSEEKISKK
Ga0182222_10426941	3300017413	Miscanthus Phyllosphere	VKRLGSKIFILAKNWSRDPLFIVTRFLSILSMSSEFSTGHGFHLFKLIFSMVTSFVVLSEEKYQRNK
Ga0182222_10998231	3300017413	Miscanthus Phyllosphere	TYLALPCSKNFILTKNRSQDPIFVVTIYLSNLSTSSEFSTGHAFHLFKLIFYVVSSFLRLIEEKISKK
Ga0182228_10604071	3300017420	Miscanthus Phyllosphere	VKQLGLKNFILAKNWSKDPLFVVTSFLPILSMSYEFSTSHAFHLIKLIFFVVTSFVLLSEEKI
Ga0182219_11011373	3300017424	Miscanthus Phyllosphere	VKQPGSKNFILAKNCSKDPLFMVTSFLSILSTSYQFSTGHAFHLFKLIFSVVTSFVLLSEEK
Ga0182219_11013431	3300017424	Miscanthus Phyllosphere	SDLEIFILAKNWSQDPLFVVIGFLSILSTSSKFSTRHAFYLFKLIFSVVTSFVFLSEEKISKK
Ga0182224_10287511	3300017425	Miscanthus Phyllosphere	VKQPGLKNFILAKNWSRDPLFMVTSFLPILSTSFEFSIGHGFHLFKLIFSVVTSFIVLSEEKYQRNKRKNSKN
Ga0182224_10824771	3300017425	Miscanthus Phyllosphere	TYSDLLYLENFILAKNWSQDPIFVVTSFLSILSMSSVFSTDHDFHLFRHIFSMVTYFVLLSEEKISKN
Ga0182224_11266182	3300017425	Miscanthus Phyllosphere	MTSTRDTYSALPGLKNFISGKNWSQDPIFVVTSFLSILSTSSEFSTGHAYHLFKLIFSMVTSFVILS
Ga0182224_11548842	3300017425	Miscanthus Phyllosphere	FFILAKNRSQDPLFMVTSFLTILKMTFEFSTGHTFHLFKLIFSMITTFVLIGEEKYQKN
Ga0182190_10451872	3300017427	Miscanthus Phyllosphere	SKIFILTKNRSQDPIFVVTIFLSNLSTSSEFSTGHDFHLFKLIFSMVTSFVLLSEEKI
Ga0182190_11198031	3300017427	Miscanthus Phyllosphere	FILAKNRSQDPLFVVTSFLSIFSMTFEFSTGHAIHLFKLIFSVVTTFVLLSEEKISKK
Ga0182190_11477601	3300017427	Miscanthus Phyllosphere	GAKVKQPGSKNFILAKNWSRDPLFVVTSFLQILSTSFEFSIGHAYHLCKLIFSVVTSFVLLSEEKISNK
Ga0182192_10862461	3300017430	Miscanthus Phyllosphere	TYSALLGLKIFISAKNLSQDPIFVVTSFLSILSTSSEFSTGHAYHLLKLKFPMVTSFVLLSEEKIKKN
Ga0182206_10415502	3300017433	Miscanthus Phyllosphere	GSKIFILAKNWSQDPLFVVTSILLILIMSSEFSIGYAFHLFKLIFSLVSSFVLLS
Ga0182206_10890201	3300017433	Miscanthus Phyllosphere	KIFILTKNRSQDPIFVVTIFLSNLSTSSKFSTGHDFHLLKLIFSMVTSFVLLSEEKI
Ga0182206_11157041	3300017433	Miscanthus Phyllosphere	TYSSLPGSKNFTSRKNWSQDPIFVVTSFLSILSTSSEFSNGHAYHLFKLIFSMVTSFVLLSEEKILKK
Ga0182209_10679611	3300017436	Miscanthus Phyllosphere	MPGSENFKLVKNWSQDHVFVVTRFLSILSKSSEISTGHVFHFFELIFSVVTSFVLLSEAKISKNKK
Ga0182209_11181442	3300017436	Miscanthus Phyllosphere	DTFSALPGSENFILAKNWSQDPIFVVTSFLSILSMSSKFSIGHGFYLFKLIFSLVTSFVL
Ga0182209_11505322	3300017436	Miscanthus Phyllosphere	ENFILAKNWSQDPLFVVTSFLSILSTTSEFSTGHAFHLFKLIFSVVTTFVHLSEEKI
Ga0182209_11611571	3300017436	Miscanthus Phyllosphere	KNWSQVPLFVVTSFLLILSTSSEFSTGHTIHLFKLIFSVVTSFVLLSEEKCKKIKR
Ga0182191_10582393	3300017438	Miscanthus Phyllosphere	LSGSKKFILAKNWSQDSIFMVTSFLSILSTSSEFSIRHAFHLFKLIFSMVTYFVLLSEEKMSKK
Ga0182193_10899361	3300017443	Miscanthus Phyllosphere	DTYSALPGPENFILAKNFSQDPIFVVTNFLSILGTYSEFYIGHAFHLFKLIFSVVTSFVLLSEEKISKK
Ga0182193_11016051	3300017443	Miscanthus Phyllosphere	LGTYSASLGLVNFILAKNRSQDPLFMVTSFLSILSKTSELSIGHAIHLFKLIFSMVTTFVLLREEKISKK
Ga0182193_11580321	3300017443	Miscanthus Phyllosphere	KTSTRDTYSALSGLKKFISAKNWSQDPIFVVTRFLSILSTSSKFSKGHAYHLFKLIFSMVTSFVLLSEEKISKK
Ga0182218_10867742	3300017683	Miscanthus Phyllosphere	DTYSALLGSENFILAKNLSQDPIFVVRSFLSILSTSSEFSTGHAFHLFNLLFSMVTSFVLQSEEKISKK
Ga0182218_11327111	3300017683	Miscanthus Phyllosphere	MSGSEIFILVKKWSQDSLFVVTRSLSISSTSSGNSTGHVFHLFKLKFSVVTSFVLLSEEKISKNKKKK
Ga0182225_10616351	3300017684	Miscanthus Phyllosphere	GSENFILAKNWSQDPLFVVTSFFSILSMTSQCSIGHAFDLFKLIFSVVTSFVLLGVENIYKK
Ga0182231_10766041	3300017689	Miscanthus Phyllosphere	DSGYLFSFVRFENFYLAKNWSQDPLSVVIGFLSILSTSSEFSTGHAFHLFKLIFFVVTSFLLQSEEKMSKK
Ga0182231_11142431	3300017689	Miscanthus Phyllosphere	LRIFFWIHPTLAKFKLVKKWSQDSLFVVTRFLLILSKFSEFSIGHVFHLFKLIFSVVTSFMLLSEEKISKK
Ga0182223_10893531	3300017690	Miscanthus Phyllosphere	ENFILAKNWSQDPIFVVTSFLSILSMSSEFSTDHDFHLFRHIFSVVTYFVLLSEEKISKK
Ga0182232_10729841	3300021060	Phyllosphere	VKQLDSKNFILAKNWSQDPIFVVTSFFPILSTSFEFSIGHAFHLFKLIFSVVTSFVLQSE
Ga0207643_109300871	3300025908	Miscanthus Rhizosphere	KQLDSKNFILAKNWSKDPLFVVTSFLSILSMSYEFSTGHAFHLFKLIFFVVTSFVLLSEEKISKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080114

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences