Metagenome / Metatranscriptome Family F080112

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080112
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	124 residues
Representative Sequence	VLLLDERIRADGKHVRTWAASDGQRIQITDDDGASGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGSYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAAERPQESEA
Number of Associated Samples	90
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.25 %
% of genes near scaffold ends (potentially truncated)	36.52 %
% of genes from short scaffolds (< 2000 bps)	71.30 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere (9.565 % of family members)
Environment Ontology (ENVO)	Unclassified (31.304 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.71% β-sheet: 32.90% Coil/Unstructured: 48.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
d.232.1.1: Mago nashi protein	d1oo0a_	1oo0	0.51
d.232.1.1: Mago nashi protein	d1oo0a_	1oo0	0.51
b.69.12.1: Sema domain	d1q47a_	1q47	0.5
d.392.1.1: GBBH N-terminal domain-like (DUF971)	d3luua_	3luu	0.5
b.69.12.1: Sema domain	d1q47a_	1q47	0.5
d.392.1.1: GBBH N-terminal domain-like (DUF971)	d3luua_	3luu	0.5

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00118	Cpn60_TCP1	3.48
PF13432	TPR_16	3.48
PF14559	TPR_19	0.87
PF00498	FHA	0.87
PF01048	PNP_UDP_1	0.87
PF00069	Pkinase	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.48
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.87
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.87
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.87

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.26 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	96.52 %
Unclassified	root	N/A	1.74 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	94.78 %
Unclassified	root	N/A	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	94.78 %
Unclassified	root	N/A	1.74 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	26.09 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2.61 %
Unclassified	root	N/A	1.74 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	26.09 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.74 %
Unclassified	root	N/A	1.74 %
Methylococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	26.09 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.74 %
Unclassified	root	N/A	1.74 %
Methylococcus capsulatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	26.09 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	1.74 %
Unclassified	root	N/A	1.74 %
Methylococcus capsulatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	26.09 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1.74 %
Unclassified	root	N/A	1.74 %
Methylococcus capsulatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005329\|Ga0070683_100580835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1072	Open in IMG/M
3300005330\|Ga0070690_100095340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1965	Open in IMG/M
3300005330\|Ga0070690_101200093	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	605	Open in IMG/M
3300005332\|Ga0066388_101899358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1063	Open in IMG/M
3300005332\|Ga0066388_106978324	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	568	Open in IMG/M
3300005334\|Ga0068869_100105737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2135	Open in IMG/M
3300005338\|Ga0068868_101341570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	665	Open in IMG/M
3300005340\|Ga0070689_100043209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3462	Open in IMG/M
3300005343\|Ga0070687_100155646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1346	Open in IMG/M
3300005343\|Ga0070687_100238550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1123	Open in IMG/M
3300005343\|Ga0070687_100426635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	876	Open in IMG/M
3300005347\|Ga0070668_100210233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1600	Open in IMG/M
3300005365\|Ga0070688_100168257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1510	Open in IMG/M
3300005365\|Ga0070688_100360118	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1067	Open in IMG/M
3300005440\|Ga0070705_101132491	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	642	Open in IMG/M
3300005444\|Ga0070694_100919636	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300005466\|Ga0070685_10073529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	2032	Open in IMG/M
3300005534\|Ga0070735_10147634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1459	Open in IMG/M
3300005535\|Ga0070684_100882308	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	838	Open in IMG/M
3300005547\|Ga0070693_100711194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	736	Open in IMG/M
3300005548\|Ga0070665_100899583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	898	Open in IMG/M
3300005548\|Ga0070665_101144201	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	789	Open in IMG/M
3300005617\|Ga0068859_101436695	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	761	Open in IMG/M
3300005617\|Ga0068859_102221802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	605	Open in IMG/M
3300005841\|Ga0068863_100337413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1466	Open in IMG/M
3300005841\|Ga0068863_102621442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	513	Open in IMG/M
3300005844\|Ga0068862_101566602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → Methylococcus capsulatus	665	Open in IMG/M
3300006028\|Ga0070717_10026604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4616	Open in IMG/M
3300006028\|Ga0070717_10081838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2712	Open in IMG/M
3300006358\|Ga0068871_100934936	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300007788\|Ga0099795_10305429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	701	Open in IMG/M
3300009174\|Ga0105241_10655904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	954	Open in IMG/M
3300009176\|Ga0105242_11533929	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	698	Open in IMG/M
3300009553\|Ga0105249_10046399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3954	Open in IMG/M
3300010043\|Ga0126380_10314110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1122	Open in IMG/M
3300010047\|Ga0126382_10391334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1081	Open in IMG/M
3300010047\|Ga0126382_10617773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	895	Open in IMG/M
3300010358\|Ga0126370_12072344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	558	Open in IMG/M
3300010359\|Ga0126376_11169105	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300010397\|Ga0134124_10118741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2325	Open in IMG/M
3300010399\|Ga0134127_10236447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1721	Open in IMG/M
3300010399\|Ga0134127_10264708	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1637	Open in IMG/M
3300010400\|Ga0134122_12009408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	617	Open in IMG/M
3300010401\|Ga0134121_10076175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2781	Open in IMG/M
3300010401\|Ga0134121_11460528	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	697	Open in IMG/M
3300010403\|Ga0134123_10162792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1860	Open in IMG/M
3300010403\|Ga0134123_10536125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1110	Open in IMG/M
3300011431\|Ga0137438_1003737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4202	Open in IMG/M
3300011438\|Ga0137451_1083451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	962	Open in IMG/M
3300011442\|Ga0137437_1004297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5045	Open in IMG/M
3300011442\|Ga0137437_1019012	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2364	Open in IMG/M
3300012212\|Ga0150985_103023391	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2183	Open in IMG/M
3300012212\|Ga0150985_112608832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1207	Open in IMG/M
3300012212\|Ga0150985_116382047	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
3300012469\|Ga0150984_110513375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	574	Open in IMG/M
3300012469\|Ga0150984_123554742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	508	Open in IMG/M
3300012971\|Ga0126369_11473203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
3300013104\|Ga0157370_12104756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	506	Open in IMG/M
3300013297\|Ga0157378_10055568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3527	Open in IMG/M
3300014968\|Ga0157379_11172372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	738	Open in IMG/M
3300015245\|Ga0137409_10627358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	906	Open in IMG/M
3300018482\|Ga0066669_12318116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	512	Open in IMG/M
3300019874\|Ga0193744_1000334	All Organisms → cellular organisms → Bacteria	10522	Open in IMG/M
3300019880\|Ga0193712_1018812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1449	Open in IMG/M
3300019880\|Ga0193712_1051784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	895	Open in IMG/M
3300021377\|Ga0213874_10219226	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	691	Open in IMG/M
3300021445\|Ga0182009_10017999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2621	Open in IMG/M
3300025885\|Ga0207653_10416573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	527	Open in IMG/M
3300025918\|Ga0207662_10880095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	633	Open in IMG/M
3300025927\|Ga0207687_11694747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	542	Open in IMG/M
3300025934\|Ga0207686_11420749	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	571	Open in IMG/M
3300025936\|Ga0207670_10014420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4691	Open in IMG/M
3300025942\|Ga0207689_10051506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3394	Open in IMG/M
3300025944\|Ga0207661_10317081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1401	Open in IMG/M
3300025961\|Ga0207712_10066476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2577	Open in IMG/M
3300026023\|Ga0207677_11281851	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	673	Open in IMG/M
3300026023\|Ga0207677_11713328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	583	Open in IMG/M
3300026075\|Ga0207708_10031773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4009	Open in IMG/M
3300028379\|Ga0268266_11612235	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	624	Open in IMG/M
3300028652\|Ga0302166_10158179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	530	Open in IMG/M
3300028732\|Ga0302264_1001060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7330	Open in IMG/M
3300028794\|Ga0307515_10006927	All Organisms → cellular organisms → Bacteria	22524	Open in IMG/M
3300028800\|Ga0265338_10018906	All Organisms → cellular organisms → Bacteria → Proteobacteria	7345	Open in IMG/M
3300028868\|Ga0302163_10081833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	802	Open in IMG/M
3300028870\|Ga0302254_10139407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	890	Open in IMG/M
3300030294\|Ga0311349_11622697	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	599	Open in IMG/M
3300030905\|Ga0308200_1076779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	674	Open in IMG/M
3300031093\|Ga0308197_10467385	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	510	Open in IMG/M
3300031114\|Ga0308187_10166998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	747	Open in IMG/M
3300031200\|Ga0307496_10002627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1871	Open in IMG/M
3300031200\|Ga0307496_10136017	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	512	Open in IMG/M
3300031232\|Ga0302323_101209639	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	845	Open in IMG/M
3300031232\|Ga0302323_103040445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	535	Open in IMG/M
3300031238\|Ga0265332_10030332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2362	Open in IMG/M
3300031239\|Ga0265328_10258021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	668	Open in IMG/M
3300031421\|Ga0308194_10289283	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	563	Open in IMG/M
3300031507\|Ga0307509_10000029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	215555	Open in IMG/M
3300031507\|Ga0307509_10011370	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10786	Open in IMG/M
3300031507\|Ga0307509_10076104	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3484	Open in IMG/M
3300031616\|Ga0307508_10748921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	590	Open in IMG/M
3300031616\|Ga0307508_10852627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	533	Open in IMG/M
3300031715\|Ga0307476_10026165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3840	Open in IMG/M
3300031730\|Ga0307516_10008784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	11356	Open in IMG/M
3300031730\|Ga0307516_10032644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5242	Open in IMG/M
3300031902\|Ga0302322_100344275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1692	Open in IMG/M
3300031913\|Ga0310891_10382523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	510	Open in IMG/M
3300031996\|Ga0308176_12548406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	545	Open in IMG/M
3300032126\|Ga0307415_100165051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1721	Open in IMG/M
3300032180\|Ga0307471_100136532	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2325	Open in IMG/M
3300034099\|Ga0373902_116237	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	617	Open in IMG/M
3300034130\|Ga0370494_096954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	746	Open in IMG/M
3300034268\|Ga0372943_0020642	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3508	Open in IMG/M
3300034643\|Ga0370545_013268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1285	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.74%
Host-Associated	Host-Associated	37.39%
Engineered	Engineered	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.26%
Plants	Host-Associated → Plants	37.39%
Aquatic	Environmental → Aquatic	3.48%
Bioremediation	Engineered → Bioremediation	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.30%
Roots	Host-Associated → Plants → Roots	8.70%
Peat	Environmental → Terrestrial → Peat	6.96%
Sediment	Environmental → Aquatic → Sediment	3.48%
Metal	Engineered → Bioremediation → Metal	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.43%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified	7.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.70%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	7.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.96%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	6.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.35%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034099	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3	Engineered	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_01544050	2140918013	Soil	VKRDQASLLLDERILGDGRRARTHASVAGERVVIADDDGTTGALSVPALDKVMTRYGRELDPGVALTGDALELPGGHRLRRLRYHAVVDAEARDYLVWERPDHPPLAVIAPMATAALRYIVLHLVDDGASKI
Ga0070683_1005808352	3300005329	Corn Rhizosphere	VLLLDERIRPDGSHARTWATCDGDRVQLLDDDGAVGELSVLAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRRLRHHVRFDAEGRDYLVWERPDDEPRVCVAATVTAALRFLVARWREQSIRNLR*
Ga0070690_1000953402	3300005330	Switchgrass Rhizosphere	VLLLDERIKADGTHVRTWATSQDNHLRISEDDGPTGELSLVVVDRVMCRYGRPLDHGIALEGDSLTCGKYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLAGERPQESEA*
Ga0070690_1012000932	3300005330	Switchgrass Rhizosphere	CDGDRVQIFDDDTPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVARWREQSIRNLR*
Ga0066388_1018993581	3300005332	Tropical Forest Soil	VLLLDERIRPDGSHARTWAACDGDRVQIFDDAGPVGELSVMAVDQVMRRYGRPLDPAVALEGDSLGCGTCKLRHLRHHAPVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR*
Ga0066388_1069783241	3300005332	Tropical Forest Soil	MLVLLLDERIRVDGKHVRTWATSDGQRIVITDEDGPSGALSLVAVDRVMCRYGRPLEYGIALEGDSLVCGHYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAM
Ga0068869_1001057372	3300005334	Miscanthus Rhizosphere	VLLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGPYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEA*
Ga0068868_1013415702	3300005338	Miscanthus Rhizosphere	MTVLLLDERIRADGRHVRTWAASDGQRIQITDDDGPSCALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGGYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAAERPQESEA*
Ga0070689_1000432093	3300005340	Switchgrass Rhizosphere	VLLLDERIKADGTHVRTWATSQDNHLRVSEDDGPTGELSLVAVDRVMCRYGRPLDHGIALEGDSLTCGRYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAGERPQESEA*
Ga0070687_1001556462	3300005343	Switchgrass Rhizosphere	VLLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGPYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAA
Ga0070687_1002385502	3300005343	Switchgrass Rhizosphere	NIAVLLLDERIRADGKHVRTWAATDGQRIQISDEDGSSGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGRYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACLAAMATAALRYLTLRLAAERPQESEA*
Ga0070687_1004266352	3300005343	Switchgrass Rhizosphere	HVRTWATSQDNHLRISEDDGPTGELSLVAVDRVMCRYGRPLDHGIALEGDSLTCGRYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLAGERPQESEA*
Ga0070668_1002102331	3300005347	Switchgrass Rhizosphere	MRPMLLLDERIKADGAHARTWATSEGDHLRISDDDGPAAELSLIAVDRVMCRYGRPLDEGIALEGESLLCGGYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACIAKLATAALRYLTVQRAGASSGI*
Ga0070688_1001682572	3300005365	Switchgrass Rhizosphere	VLLLDERIKADGTHVRTWATSQDNHLRISEDDGPTGELSLVAVDRVMCRYGRPLDHGIALEGDSLTCGRYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAGERPQESEA*
Ga0070688_1003601182	3300005365	Switchgrass Rhizosphere	MPRVLLLDERILADGRHARTVARAEGDRVSISDDDGTRGELSIHAVDRVMARYGRPLEAGIALDGEALALPGGFCLRRLRYHAAVDAEGRDYLVWERPDGEPLAAIATMVTAALRYL
Ga0070705_1011324911	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLDERIRSDGAHSRTWASCEQERLQIRDDEGAAGELAVAIVDQVMRRYGRPLDEGIALDGESLACGRYTLRRLRHRAAVDAEGRDYLVWERPGDEPLVCVAATATAALRFLMDRFSREVPSGI*
Ga0070694_1009196362	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	QRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGRYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEV*
Ga0070685_100735293	3300005466	Switchgrass Rhizosphere	DGTHARTWAACDGARIQIQDEDGAAGELSLLAVDRVMMRYGRALEHGVALEGDVLMCGTYRLRRLRYHAIVDAEGRDYLVWERPDGEPLACVAAMVTSALRFLMMRLAAERPQESEA*
Ga0070735_101476342	3300005534	Surface Soil	VLLLDERIRPDGSHARTWASCDEDRVQIFDDDAPIGELSVVAVDQVMRRYGRPLDPAIALEGESISCGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR*
Ga0070684_1008823081	3300005535	Corn Rhizosphere	RIRPGGSHARTWATCDGDRVQLLDDDGAVGELSVLAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRRLRHHVRFDAEGRDYLVWERPDDEPRVCVAATVTAALRFLVARWREQSIRNLR
Ga0070693_1007111942	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLDERIRSDGAHSRTWASCEQERLQIRDDEGAAGELAVAIVDQVMRRYGRPLDEGIALDGESLACGRYTLRRLRHRAAVDAEGRDYLVWERPGDEPLVCVAATATAALRFLMDRFSREVPSGI
Ga0070665_1008995832	3300005548	Switchgrass Rhizosphere	ARIQIRDEDGATGELSLLAVDRVMMRYGRALEHGVALEGDVLMCGAYRLRRLRYHAIVDAEGRDYLVWERPDGEPLACVAAMVTSALRFLMMRLAGERPQESEA*
Ga0070665_1011442011	3300005548	Switchgrass Rhizosphere	LLDERIKADGTHARTWATADGDQVALRDDDGASGSLSTLAVDRVMARYGRELEPGIALDGESIAVGGYRLRRLRFHAAVDAEGRDYLVWERPEGEPLACVATMATAALRYLTLRLQGERPQESEG*
Ga0068859_1014366951	3300005617	Switchgrass Rhizosphere	VLLLDERIQPDGKHVRTWAASDGERLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGRYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEA*
Ga0068859_1022218022	3300005617	Switchgrass Rhizosphere	ERIKADGTHARTWATSEGDRLRIVEDDGPMGELSLVAVDRVMCRYGRPLDHGIALEGDSLVCGRYRLRRLRYHAIVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAGERPQESET*
Ga0068863_1003374132	3300005841	Switchgrass Rhizosphere	VLLLDERIKADGTHVRTWATSQDNHLRISEDDGPTGELSLVAVDRVMCRYGRPLDHGIALEGDSLTCGRYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLAGERPQESEA*
Ga0068863_1026214421	3300005841	Switchgrass Rhizosphere	VLLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGRYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEV*
Ga0068862_1015666021	3300005844	Switchgrass Rhizosphere	MLLLDERIKADGAHARTWATSDGERVQIRDEDGSSGELSLAAVDHVMRRYGRPLDDNIVVEGDSLTCGTFKLRRLRYHAAVDAESRDYLVWERPGDEPVVCLAATATAAMRFLIDRISRGAPSGI*
Ga0070717_100266042	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLLLDERIKPDGTHARTWATCDGARVQIQDEDGTTGALSLLAVDRVMTRYGRALEHGVALEGDVLMCGSYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMVTAALRFLVMRLAADKPQESEA*
Ga0070717_100818382	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPSMLLLDERIKADGTHARTWATSEGERLRISDDEGPAGELSLLAVDRVMCRYGRPLDHGIALEGDALVCGGYRLRRLRYHAVVDAEGRDYLVWERPEGEPLACVAAMATAALRYLALRLAGERPQESEA*
Ga0068871_1009349362	3300006358	Miscanthus Rhizosphere	LVLLLDERIRSDGAHSRTWASCEQERLQIRDDEGAAGELAVAIVDQVMRRYGRPLDEGIALDGESLACGRYTLRRLRHRAAVDAEGRDYLVWERPGDEPLVCVAATATAALRFLMDRFSREVPSGI*
Ga0075436_1002886842	3300006914	Populus Rhizosphere	VLLLDERILADGRHAKTFASVAGDRVQISDDDANGELSVHAVERVMVRYGRPLAPGIALDGEALALPGGFCLRRLRHHAPVDAEARDYLVWERPDGEPLAAIATMVTAALRYL
Ga0099795_103054292	3300007788	Vadose Zone Soil	WATCDGDRVQIFDDDTPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRHLRHHARVDAESRDYLVWERPDDEPLVCVAATVTAALRFLVARWREQSIRNLR*
Ga0105241_106559041	3300009174	Corn Rhizosphere	VLLLDERIKADGTHARTWAISEGDHVALRDEDGASGRLSAVAVDRVMTRYGRPLDADVALDGDAIAIGDYRLRRLRYHARVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLQGERPQESEG*
Ga0105242_115339291	3300009176	Miscanthus Rhizosphere	VLLLDERIRPDGSHARTWASCDGDRVQIFDDDTPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGSCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR*
Ga0105249_100463995	3300009553	Switchgrass Rhizosphere	LDERIKADGTHVRTWATSQDNHLRISEDDGPTGELSLVVVDRVMCRYGRPLDHGIALEGDSLTCGKYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLAGERPQESEA*
Ga0126380_103141101	3300010043	Tropical Forest Soil	VLLLDERIRSDGSHARTWATCDGDRVRIVDDDSPVGELSVMAVDQVMRRYGRPLDAAIALEGDSLICGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR*
Ga0126382_103913342	3300010047	Tropical Forest Soil	VLLLDERIRSDGAHSRTWASCEQERLQICGDDGAVGELAVAIVDQVMQRYGRPLDEGIALDGESLACGRYTLRRLRHRAAVDAEGRDYLVWERPGDEPLVCVAATATAALRFLMDRFSREVPSGI*
Ga0126382_106177731	3300010047	Tropical Forest Soil	MLLLDERIKADGAHARTWATSDGERVQIRDEDGSSGELSLAAVDHVMRRYGRPLDDNIVVEGDSLTCGTFKLRRLRYHAAVDAESRDYLVWERPGDEPVVCLAATATAAMRFLIDRLSRGTPSGI*
Ga0126370_120723441	3300010358	Tropical Forest Soil	VLLLDERITADGRHVRTWATSDGERLRISDDDGPTGALSIVAVDRVMSRYGRPLDWGIALEGDSLVCGSYRLRRLRYRAVVDSEGRDYLVWERPQGEPVACVAAMATAALRYLTLRLAAERPQESEA*
Ga0126376_111691051	3300010359	Tropical Forest Soil	DSRLTGDEHSFTGHDGHVGIVDDSGPVVELSVIAVDQVMRRYGRPLDAAIALEGDSLACGTCKLRRLRHHAIVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLLARWSERDIRNLR*
Ga0134124_101187412	3300010397	Terrestrial Soil	LLLDERIKADGTHVRTWATSQDNHLRISEDDGPTGELSLVVVDRVMCRYGRPLDHGIALEGDSLTCGKYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLAGERPQESEA*
Ga0134127_102364472	3300010399	Terrestrial Soil	VLLLDERIQADGKHVRTWATSDGQKLRITDDDGAGGALSLVAIDRVMCRYGRPLDHGIALEGDSLECGPYRLRRLRYHAVVDAEARDYLVWERPDGEPVACLAAMATAAMRYLTLRLAAERSQESEA*
Ga0134127_102647082	3300010399	Terrestrial Soil	VLLLDERIQPDGKHVRTWAASDGERLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGPYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEA*
Ga0134122_120094081	3300010400	Terrestrial Soil	VLLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGRYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEA*
Ga0134121_100761752	3300010401	Terrestrial Soil	MLLLDERIKADGTHARTWAMCEGDRLRLVDDDGSVGELSLVAVDRVMCRYGRPLERGIALEGDSLLCGKYRLRRLRYHAAVDAEGRDYLVWERADDEPLACVAAMVTAALRYLTLRLADERPQESEA*
Ga0134121_114605281	3300010401	Terrestrial Soil	VLLLDERIKADGIHVRTWAASDGERMQISDDDGATGELSLVAVDRVMCRYGRPLDHGIALEGDSLVCGGYRLRRLRYHALVDAEGRDYLIWERPDGEPLACVAAMVTAVFRYLTLRLAGERPQESEA*
Ga0134123_101627923	3300010403	Terrestrial Soil	VLLLDERIQADGKHVRTWATSDGQKLRITDDDGAGGALSLVAIDRVMCRYGRPLDHGIALEGDSLECGQYRLRRLRYHAVVDAEARDYLVWERPDGEPVACLAAMATAAMRYLTLRLAAERSQESEA*
Ga0134123_105361251	3300010403	Terrestrial Soil	VLLLDERIRSDGSHARTWATSEGERMRIRDDDGATGELSLLAIDRVMCRYGRPLDHGIALEGESLTCGDYRLRRLRYRAIVDAEGRDYLVWERPDGEPLACLAAMVTAVLRYLTLRLREERPQETEA*
Ga0137438_10037373	3300011431	Soil	VLLLDERIKADGAHVRTWAAAAGDRLQITDDDGATGELSLVAVDRVMCRYGRPLDHGIALEGDSLVCGRFRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAGERPQESEA*
Ga0137451_10834511	3300011438	Soil	MRSMFLLDERIKADGTHARTWATSEGDRLRIIDDDGPTGELSLVAVDRVMCRYGRPLDHGIALEGDSLMWGGYRLRRLRYHAVVDAEGRDYLVWERPEGEPLACVAAMVTAALRYLALRLAGERPQESE
Ga0137437_10042974	3300011442	Soil	LSDSLWGTRCAVLLLDERIKADGTHVRTWAVSCGDRLQITEDDGPTGELSLMAVDRVMCRYGRPLDHGVAVEGESLLCGGYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLASERPQESET*
Ga0137437_10190121	3300011442	Soil	MRCVLLLDERIRSDGVHSCTWATCDGDVVRLRDDDDGEIGGLPVAVVDQVMRRYGRPLDERIALDGDALACGIYTLRRLRHRAAVDADGRDYLVWHQPGCEPLACVAATVTAALRYLMGQRANAPRSVPSGI*
Ga0150985_1030233913	3300012212	Avena Fatua Rhizosphere	LLDERIRPDGSRARTWAACDGDRVQITDEDGPVGELSVLAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVERWREQSIRNLR*
Ga0150985_1126088322	3300012212	Avena Fatua Rhizosphere	VLLLDERIRADGKHVRTWAASDGQRIQISDEDGASGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGTYRLRRLRYRAVVDAEGRDYLVWERPDGEPLACLAAMATAALRYLTLRLAAERPQESEA*
Ga0150985_1163820472	3300012212	Avena Fatua Rhizosphere	ATCDGDRVLITDEDGPVGELPVLAVDQVMRRYGRPLDPAIALEGGSLTCGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVARWREHSIRNLR*
Ga0150984_1105133751	3300012469	Avena Fatua Rhizosphere	VLLLDERIRADGKHVRTWAASDGQRIQISDEDGASGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGTYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACLAAMATAALRYLTLRLAAERPQESEA*
Ga0150984_1235547421	3300012469	Avena Fatua Rhizosphere	DERIRPDGSHARTWATCDGDRVEILDDDGVVGELSVLAVDQVMRRYGRPLDPEIMLEGASLTCGTCKLRRLRHHARVDAESRDYLVWERPDDEPQVCVAATVTAALRFLVQRWREQRIRNLR*
Ga0126369_114732032	3300012971	Tropical Forest Soil	DGDRVQIFDDTIPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR*
Ga0157370_121047562	3300013104	Corn Rhizosphere	MRAVLRLDERIRADGTHAKCFASAAGDRIKIQDDDGTSGELSLTAVDRVMTRYGRPLEHGVALEGEFLTMGEYRLRRLRYHARVDAEGRDYLGWERPNEEPLAVVATMATA
Ga0157378_100555682	3300013297	Miscanthus Rhizosphere	MLLLDERITADGTHVRTWAAWPAPHDGDAARDGDEQRLQIRDDAGLAGALSLVAVDRVMSRYGRPLERGIAPEGESLRCGRYRLRRLRFHAVVDAEARDYLVWEAPDAEPLACVAATATAALRHLAARLAQHQESEA*
Ga0157379_111723722	3300014968	Switchgrass Rhizosphere	VLLLDERIRSDGAHSRTWASCEQERLQIRDDEGAAGELAVAIVDQVMRRYGRPLDEGIALDGESLACGRYTLRRLRHRAAVDAEGRDYLVWERPGDEPLVCV
Ga0137409_106273581	3300015245	Vadose Zone Soil	RSTALSWGTRCARVLLLDERIRSDGSHGRTWATCDGDRVQIFDDDTPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRHLRHHARVDAESRDYLVWERPDDEPLVCVAATVTAALRFLVARWREQSIRNLSRREHAVF*
Ga0066669_123181161	3300018482	Grasslands Soil	MRGMLLLDERIGADGSHVRTWATSDGERIRLSDDGGAIGELPLGVVDHVMARYGRPLDGAIRLEGDSLTCGTCRLRRLRHRAAVDAEGRDYLVWERPGDEPVACIATT
Ga0193744_10003348	3300019874	Soil	MRCVLLLDERIRSDGAHSCTWATCDGDAVRLRDDDDGEIGGLPVAVVDQVMRRYGRPLDDGIALDGDALACGIYTLRRLRHRAAVDADGRDYLVWQPPGGEPLACVAATVTAALRYLMGQRASPPRGAPSGI
Ga0193712_10188122	3300019880	Soil	VLLLDERIKADGTHARTWASSAGERLRLTDDDGATGELSLVAVDRVMCRYGRPLEHGIALEGDSLVCGRYRLRRLRYRAAVDAEGRDYLVWERPDGEPVACVAAMATAALRYLTLRLAAERPQESEA
Ga0193712_10517842	3300019880	Soil	VLLLDERIRPDGRHVRTWAASDGQRIRITDDDGPSGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGTYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAAERPQESEA
Ga0213874_102192262	3300021377	Plant Roots	VLLLDERIKPDGSHARTFAAAVGDDRVEIRDDDGARGMLSLAAFDRVMCRYGRPLDENIVLDGEPLVLGVYRLRRLRHHAIVDAEGRDYLVWERPDGEPLACIATMVT
Ga0182009_100179993	3300021445	Soil	VLLLDERIKPDGSRARTWATCDGDRVELLDDDGVMGELSVLAVDQVMRRYGRPLDPEIALEGASLTCGTCKLRRLRHHARVDAEGRDYLVWERPDDEPQVCVAATVTAALRFLVERWREQRIRNLR
Ga0207653_104165731	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLDERIQADGKHVRTWATSDGQKLRITDDDGAGGALSLVAIDRVMCRYGRPLDHGIALEGDSLECGPYRLRRLRYHAVVDAEARDYLVWERPDGEPVACLAAMATAAMRYLTLRLAAERSQES
Ga0207662_108800952	3300025918	Switchgrass Rhizosphere	VLLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGPYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALR
Ga0207687_116947471	3300025927	Miscanthus Rhizosphere	ARIVHGVQRLTVDCLRPERSTSLTWGTRCARVLLLDERIRPDGSHARTWASCDGDRVQIFDDDTPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGSCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR
Ga0207686_114207491	3300025934	Miscanthus Rhizosphere	PERSTSLTWGTRCARVLLLDERIRPDGSHARTWASCDGDRVQIFDDDTPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGSCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR
Ga0207670_100144205	3300025936	Switchgrass Rhizosphere	VLLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGRYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEA
Ga0207689_100515062	3300025942	Miscanthus Rhizosphere	VLLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGPYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEA
Ga0207661_103170812	3300025944	Corn Rhizosphere	VLLLDERIRPDGSHARTWATCDGDRVQLLDDDGAVGELSVLAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRRLRHHVRFDAEGRDYLVWERPDDEPRVCVAATVTAALRFLVARWREQSIRNLR
Ga0207712_100664762	3300025961	Switchgrass Rhizosphere	VLLLDERIKADGTHVRTWATSQDNHLRISEDDGPTGELSLVVVDRVMCRYGRPLDHGIALEGDSLTCGKYRLRRLRYHAAVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLAGERPQESEA
Ga0207677_112818512	3300026023	Miscanthus Rhizosphere	MTVLLLDERIRADGRHVRTWAASDGQRIQITDDDGPSCALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGGYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAAERPQESEA
Ga0207677_117133281	3300026023	Miscanthus Rhizosphere	LLLDERIQPDGKHVRTWATSDGQRLEIRDDDGPAGALSLVAVDRVMCRYGRPLDYGIALEGDSLDCGPYRLRRLRYHAIVDAEGRDYLVWERPDGEPLAVLAAMATAALRYLTLRLAAERPQESEA
Ga0207708_100317733	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLDERIRADGKHVQTWATSDGERMRITDDDRPAGELSLVAVDRVMCRYGRPLDYGIALEGDSLVCGRYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACLAAMATAALRYLTLRLAAERPQESEA
Ga0268266_116122351	3300028379	Switchgrass Rhizosphere	LLDERIKADGTHARTWATADGDQVALRDDDGASGSLSTLAVDRVMARYGRELEPGIALDGESIAVGGYRLRRLRFHAAVDAEGRDYLVWERPEGEPLACVATMATAALRYLTLRLQGERPQESEG
Ga0302166_101581791	3300028652	Fen	ARTWASWSFHDGERLQIRDDDGSTGAVSLVAVDRVMRRYGRPLDPGVALDGQSLHCAQYRLCRLRHHAVVDAEARDYLVWQAPDGEPVACIAATATAVLRHLVARISGI
Ga0302264_10010602	3300028732	Fen	MLLLDERITRDGDHARTWASWSFHDGERLQIRDDDGSTGAVSLVAVDRVMRRYGRPLDPGVALDGQSLHCAQYRLCRLRHHAVVDAEARDYLVWQAPDGEPVACIAATATAVLRHLVARISGI
Ga0307515_100069276	3300028794	Ectomycorrhiza	VLLLDERIAPDGTHARTWATSDGERVQIRDEDGSSGELSLAAVDRVMCRYGRPIDRDIALQGDSLTCGTYKLRRLRHHAIVDAEGRDYLVWERPGEEPMVCLAATATAALRFLAARLGKAAPSGN
Ga0265338_100189068	3300028800	Rhizosphere	MTGAPRLLLDERIRADGQVARSWARRGADRLALEDDEGASGELSIVAVDRVMTRYGRPLEPGIAPDGDRLELDGGFALVRMRFHALVDATGRDYLVWHRPDGEPLAVLATHATAALRYLTLRLAGERGVDPG
Ga0302163_100818332	3300028868	Fen	MLLLDERITRDGDHARTWASWSFHDGERLQIRDDDGSTGAVSLVAVDRVMRRYGRPLDPGVALDGQSLHCAQYRLCRLRHHAVVDAEARDYLVWQAPDGEPVACIAATATAVLRHLVAR
Ga0302254_101394072	3300028870	Fen	MLLLDERIAADGTHVRTWADWPAPGSGGDGDDQRLQIRDDAGLAGALSLVAVDRVMARYGRPLERGIAPDGESLRCGRYRLRRLRFHAVVDVEARDYLVWEAPDAEPVACIAAMATAALRHLAAASGI
Ga0311349_116226972	3300030294	Fen	DGTHVRTWADWPAPGSGGDGDDQRLQIRDDAGLAGALSLVAVDRVMARYGRPLERGIAPDGESLRCGRYRLRRLRFHAVVDVEARDYLVWEAPDAEPVACIAAMATAALRHLAAASGI
Ga0308200_10767791	3300030905	Soil	GRHVRTWAASDGERIHITDEDGSSGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGSYRLRRLRYHAVVDAEGRDYLVWERPDGEPVACLAAMATAALRYLTLRLAAERPQESEA
Ga0308197_104673851	3300031093	Soil	VLLLDERIGVDGKHVRTWATSDGQRIRITDGEGPTGATGALSFVAVDRVMCRYGRPLDHGIALEGDSLVCGRYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACIAAMATAALRYLTLRLAAERPQESEA
Ga0308187_101669982	3300031114	Soil	RITADGRHVRTWAASDGQRIQITDDDGPSGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGGYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAAERPQESE
Ga0307496_100026272	3300031200	Soil	VLLLDERIDAEGGHARTWATSDGERLRIRDDDGTTGELPLTAVHQVMCRYGRPLEQGISLEGDSLTCGIYQLRRLRYCAAVDAEGRDYLVWVHPGDEPIACIATTIAAALRFLVARSAPGSPSGI
Ga0307496_101360171	3300031200	Soil	DSPGEIPCVEVVEAQVLLLDERIKADGVRARTWATSEGDRLWIHDDDGTARELSLVAVDRVMCRYGRPLEHGIALEGDSLTCGSYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMVTAALRYLTLRLAGERPQESEA
Ga0302323_1012096392	3300031232	Fen	MPRVLLLDERILADGSHARSWASLVGDRVRIHDDEGADGQLSIAALDRVMCRYGRPLDAEIALVGEQLDLPGGYRLRRLRYHAAVDATGRDYLVWERPDGEPLAAVGTMVAAAFRYLVMRLAAERPQESEA
Ga0302323_1030404451	3300031232	Fen	RITADGNHARTWASWSISDGERLQIRDDDGSTGALSLVAVDRVMRRYGRPLDQRVALDGQSLRCAHYRLSRLRHHAVVDAEARDYLVWQAPDDEPVACIAATATAVLRHLIARLSGI
Ga0265332_100303322	3300031238	Rhizosphere	VLLLDERIRPDGSHARTWATCNADHVRITDDDGTSGELPVTVVDQVMRRYGRPLDPAIVIEGDSLACGTHQLRRLRYHTVVDAEARDYLVWERIHSEPVCEPLVCVAATVTAALRFLVTRLHESSIRNLR
Ga0265328_102580211	3300031239	Rhizosphere	VLLLDERIRPDGSHARTWATCNADHVRITDDDGTSGELPVTVVDQVMRRYGRPLDPAIVIEGDSLACGTHQLRRLRYHTVVDAEARDYLVWERIHSEPVCEPLVCVAATVTAALRFLVTRLHESSI
Ga0308194_102892831	3300031421	Soil	VLLLDERIRADGKHVRTWAASDGQRIQITDDDGASGALSLVAVDRVMCRYGRPLDYGIALEGDSLVCGSYRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAAERPQESEA
Ga0307509_10000029114	3300031507	Ectomycorrhiza	VLLLDERIKADGTHARTWAAWPADEGDASDRLQIRDSDGLAGALSLVAVDRVMNRYGRPLERDVAQAGESMRCGRYRLRRLRFHAVVDAEARDYLVWEAPDAEPLACVAATATAALRHLVIRLAATRQESEAP
Ga0307509_100113705	3300031507	Ectomycorrhiza	MLLLDERIQADGAHSCTWATSDGDRVQIRDDSGASGELAVDVVDHVMRRYGRPLDDDIAIDGDALRCGRYTLRRLHHHALVDAEGRDYLVWQRPGEEPLVCVAATVTAALRFLMDKFSRGAASGI
Ga0307509_100761042	3300031507	Ectomycorrhiza	MLLLDERIKPDGTHARTWAEYDGERVHITDEDGATGALSVLAVDRVMCRYGRPLEHGIALDGDALMCGQFRLHMLRYHAVVDAEARDYLVWVRPDEEPLACVATMVTAALRFLMMRLAGERPQESEA
Ga0307508_107489211	3300031616	Ectomycorrhiza	VLLLDERIKADGTHVRTWASSEGTRLRISDDDGSSGELSLVAVDRVMCRYGRPLDHGIALEGDSLVCGGFRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLTAERPQESEA
Ga0307508_108526271	3300031616	Ectomycorrhiza	VLLLDERIKADGTHARTWATSAGDRLQISDDDGATGELSLVAVDRVMCRYGRPLDHGIALEGDSLVCGRFRLRRLRYHAVVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRL
Ga0307476_100261656	3300031715	Hardwood Forest Soil	VLLLDERIRSDGSHARTWATSDGDRVQIADENGPIGELSVLAVDQVMRRYGRPLDPAIALEGGSLTCGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVERWREQSIRNLR
Ga0307516_100087848	3300031730	Ectomycorrhiza	MLLLDERITADGNHARTWASWSINDGERLQIRDDDGPIGAISLVAVDRVMRRYGRPLDPDVAPDGQSLRCAHYRLSRLRHHAVVDAEARDYLVWQALDGEPVACVAATATAALRHLVARISGI
Ga0307516_100326442	3300031730	Ectomycorrhiza	VLLLDERIKADGTHVRTWAAWLDGEVGGDPGRDTGRDDPQLQPRLQIRDDDGATGALPLVAVDRVMTRYGRPLDRDVVLEGESIRCGRYRLRRLRFHAVVDAEARDYLVWEAPDAEPLACVAAMATAALRHLAARLAAVRQESEA
Ga0302322_1003442753	3300031902	Fen	RLRISDDDGLAGELSLVAVDRVMCRYGRPLEHGVALEGDSLVCGEGGAYRLRRLRYHASVDAEGRDYLVWERPDGEPLACVATMATAALRYLTLRLIGERSQESEA
Ga0310891_103825231	3300031913	Soil	MLLLDERIRADGAHACTWASCDDERVQIRDDDGASGELALGVVDQVMQRYGRPIDDGIALDGESLRCGQYTLRRLRHRAAVDAEGRDYLVWERPGHVPLVCM
Ga0308176_125484061	3300031996	Soil	MLLLDERIRADGAHSRTWATSDGERVQIRDDDGASGELAVDVVDHVMRRYGRALDGAIANDGEALRCGRYTLRRLHHHALVDAEGRDYLVWERPGEEPLACVAATATAALRFLMNKFSKGATSGI
Ga0307415_1001650511	3300032126	Rhizosphere	MRAVLLLDERIRADGTLARSWAALVGERVRISDDEGAAGELSIAALDRVMCRYGRPLEGSIALDGEALELPGGYRLRRLRYHAPVDATGRDYLVWERPGPGPDNEPLAVVAAMATAALRYLMLRLADERPQESEG
Ga0307471_1001365323	3300032180	Hardwood Forest Soil	VLLLDERIRSDGSHVRTWATYDGDRVQIFDDDIPVGELSVVAVDQVMRRYGRPLDPAIALEGDSLTCGTCKLRHLRHHARVDAEGRDYLVWERPDDEPLVCVAATVTAALRFLVVRWREQSIRNLR
Ga0373902_116237_80_472	3300034099	Sediment Slurry	VRPVLLLDERIKADGTHARTWAASEGDRLRLSDDDGSVGELSLVAVDRVMCRYGRPLDHGIALVGDSLLCGKYRLRRLRFHAVVDAEGRDYLVWERPDEEPLACVAAMVTAALRYLTLRLADERPQESET
Ga0370494_096954_148_531	3300034130	Untreated Peat Soil	VLLLDERIKADGTHARTWATAAGERLQISDDDGATGELSLVAVDRVMCRYGRPLDHGVALEGDSLICGRYRLRRLRYRAAVDAEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLAGERPQESEA
Ga0372943_0020642_2409_2825	3300034268	Soil	MEDHHEPEVGNSLVLLLDERITPDGTHARTWASYDGQRVQIRDEAGSCGELSPIAIDRVMCRYGRLLDCDIALDGDSLPCGTFTLRRLRHHAAIDAEARDYLVWERPGDESVVCLATTATAVLRFLVARLSRATPSGI
Ga0370545_013268_3_347	3300034643	Soil	HARTWASSEGTRLRISDEDGTSGELSLVAVDRVMCRYGRPLDHGIALEGDSLVCGSFRLRRLRYHAVVDTEGRDYLVWERPDGEPLACVAAMATAALRYLTLRLTAERPQESEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080112

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences