NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080083

Metagenome / Metatranscriptome Family F080083

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080083
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 52 residues
Representative Sequence MKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKPIYTGRGTL
Number of Associated Samples 83
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 73.91 %
% of genes near scaffold ends (potentially truncated) 24.35 %
% of genes from short scaffolds (< 2000 bps) 78.26 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (73.913 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(27.826 % of family members)
Environment Ontology (ENVO) Unclassified
(64.348 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(68.696 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 32.50%    β-sheet: 0.00%    Coil/Unstructured: 67.50%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00011HSP20 2.61
PF06945DUF1289 1.74
PF03237Terminase_6N 1.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 2.61
COG3313Predicted Fe-S protein YdhL, DUF1289 familyGeneral function prediction only [R] 1.74


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A73.91 %
All OrganismsrootAll Organisms26.09 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300006400|Ga0075503_1601679Not Available2092Open in IMG/M
3300006402|Ga0075511_1594697Not Available575Open in IMG/M
3300006802|Ga0070749_10036692All Organisms → Viruses → Predicted Viral3028Open in IMG/M
3300006810|Ga0070754_10123553Not Available1259Open in IMG/M
3300006916|Ga0070750_10038342Not Available2362Open in IMG/M
3300006916|Ga0070750_10039248All Organisms → cellular organisms → Bacteria2329Open in IMG/M
3300006916|Ga0070750_10147865Not Available1064Open in IMG/M
3300006920|Ga0070748_1082540All Organisms → Viruses → Predicted Viral1240Open in IMG/M
3300007276|Ga0070747_1309030Not Available543Open in IMG/M
3300007639|Ga0102865_1220963Not Available565Open in IMG/M
3300007647|Ga0102855_1028322All Organisms → Viruses → Predicted Viral1541Open in IMG/M
3300007725|Ga0102951_1054252All Organisms → Viruses → Predicted Viral1174Open in IMG/M
3300007778|Ga0102954_1063954Not Available1022Open in IMG/M
3300009000|Ga0102960_1185195Not Available745Open in IMG/M
3300009000|Ga0102960_1271634Not Available600Open in IMG/M
3300009027|Ga0102957_1225240Not Available675Open in IMG/M
3300009058|Ga0102854_1178981Not Available607Open in IMG/M
3300009172|Ga0114995_10229712All Organisms → Viruses1027Open in IMG/M
3300009172|Ga0114995_10381105Not Available774Open in IMG/M
3300009172|Ga0114995_10596294Not Available604Open in IMG/M
3300009172|Ga0114995_10611610Not Available595Open in IMG/M
3300009420|Ga0114994_10056618All Organisms → Viruses → Predicted Viral2697Open in IMG/M
3300009420|Ga0114994_10638787Not Available697Open in IMG/M
3300009422|Ga0114998_10288786Not Available769Open in IMG/M
3300009425|Ga0114997_10106368All Organisms → Viruses1706Open in IMG/M
3300009505|Ga0115564_10118819All Organisms → Viruses → Predicted Viral1451Open in IMG/M
3300009512|Ga0115003_10173589All Organisms → Viruses → Predicted Viral1303Open in IMG/M
3300009512|Ga0115003_10726752Not Available578Open in IMG/M
3300009512|Ga0115003_10877818Not Available521Open in IMG/M
3300009526|Ga0115004_10378830Not Available838Open in IMG/M
3300009526|Ga0115004_10819789Not Available554Open in IMG/M
3300009526|Ga0115004_10928889Not Available520Open in IMG/M
3300009550|Ga0115013_10550268Not Available762Open in IMG/M
3300009593|Ga0115011_10228652Not Available1386Open in IMG/M
3300009593|Ga0115011_11881800Not Available542Open in IMG/M
3300009677|Ga0115104_10685848All Organisms → Viruses → Predicted Viral1443Open in IMG/M
3300009679|Ga0115105_10711684Not Available898Open in IMG/M
3300009785|Ga0115001_10775499Not Available579Open in IMG/M
3300009785|Ga0115001_10946560Not Available517Open in IMG/M
3300010296|Ga0129348_1038647Not Available1733Open in IMG/M
3300010296|Ga0129348_1096133Not Available1046Open in IMG/M
3300010297|Ga0129345_1103494Not Available1053Open in IMG/M
3300010297|Ga0129345_1325407Not Available530Open in IMG/M
3300010318|Ga0136656_1090634Not Available1077Open in IMG/M
3300012919|Ga0160422_10397149Not Available859Open in IMG/M
3300012920|Ga0160423_10066099All Organisms → Viruses → Predicted Viral2594Open in IMG/M
3300012920|Ga0160423_10998350Not Available560Open in IMG/M
3300012952|Ga0163180_11443336Not Available573Open in IMG/M
3300017818|Ga0181565_10780395Not Available602Open in IMG/M
3300017824|Ga0181552_10371692Not Available690Open in IMG/M
3300017951|Ga0181577_10010498Not Available6927Open in IMG/M
3300018036|Ga0181600_10498103Not Available578Open in IMG/M
3300018036|Ga0181600_10587648Not Available521Open in IMG/M
3300019459|Ga0181562_10478096Not Available593Open in IMG/M
3300019703|Ga0194021_1000148Not Available3943Open in IMG/M
3300019730|Ga0194001_1014419Not Available834Open in IMG/M
3300019747|Ga0193978_1003683Not Available1446Open in IMG/M
3300019749|Ga0193983_1000356Not Available3517Open in IMG/M
3300020165|Ga0206125_10134105All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.1011Open in IMG/M
3300021185|Ga0206682_10082202All Organisms → Viruses → Predicted Viral1644Open in IMG/M
3300021957|Ga0222717_10001945Not Available16415Open in IMG/M
3300021957|Ga0222717_10192288Not Available1216Open in IMG/M
3300021957|Ga0222717_10398072Not Available762Open in IMG/M
3300021958|Ga0222718_10021215Not Available4510Open in IMG/M
3300021958|Ga0222718_10021999Not Available4404Open in IMG/M
3300021958|Ga0222718_10052992All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2564Open in IMG/M
3300021958|Ga0222718_10105699Not Available1652Open in IMG/M
3300021958|Ga0222718_10245125Not Available954Open in IMG/M
3300021960|Ga0222715_10455370All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.688Open in IMG/M
3300021964|Ga0222719_10779806Not Available528Open in IMG/M
3300023702|Ga0232119_1005255All Organisms → Viruses → Predicted Viral1979Open in IMG/M
3300025645|Ga0208643_1001312Not Available14115Open in IMG/M
3300025671|Ga0208898_1129501Not Available714Open in IMG/M
3300025674|Ga0208162_1034919All Organisms → Viruses → Predicted Viral1802Open in IMG/M
3300026183|Ga0209932_1049543All Organisms → Viruses → Predicted Viral1014Open in IMG/M
3300026504|Ga0247587_1135373Not Available606Open in IMG/M
3300027687|Ga0209710_1016403Not Available3998Open in IMG/M
3300027687|Ga0209710_1095728Not Available1186Open in IMG/M
3300027687|Ga0209710_1212131Not Available652Open in IMG/M
3300027687|Ga0209710_1215854Not Available643Open in IMG/M
3300027752|Ga0209192_10295791Not Available585Open in IMG/M
3300027791|Ga0209830_10464838Not Available525Open in IMG/M
3300027791|Ga0209830_10495460Not Available501Open in IMG/M
3300027813|Ga0209090_10185202All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300027859|Ga0209503_10356717Not Available717Open in IMG/M
3300027906|Ga0209404_11014579Not Available569Open in IMG/M
3300027906|Ga0209404_11032435Not Available564Open in IMG/M
3300028137|Ga0256412_1172742Not Available798Open in IMG/M
3300028338|Ga0247567_1059523Not Available955Open in IMG/M
3300031140|Ga0308024_1016510All Organisms → Viruses → Predicted Viral2145Open in IMG/M
3300031140|Ga0308024_1067868Not Available918Open in IMG/M
3300031143|Ga0308025_1028524Not Available2201Open in IMG/M
3300031167|Ga0308023_1019860Not Available1373Open in IMG/M
3300031175|Ga0308020_1217012Not Available579Open in IMG/M
3300031510|Ga0308010_1021409Not Available2790Open in IMG/M
3300031510|Ga0308010_1128171All Organisms → Viruses963Open in IMG/M
3300031542|Ga0308149_1022724Not Available785Open in IMG/M
3300031565|Ga0307379_11291397Not Available598Open in IMG/M
3300031579|Ga0308134_1004215Not Available3082Open in IMG/M
3300031598|Ga0308019_10087163Not Available1286Open in IMG/M
3300031599|Ga0308007_10007880All Organisms → Viruses → Predicted Viral4289Open in IMG/M
3300031599|Ga0308007_10135274Not Available888Open in IMG/M
3300031612|Ga0308009_10119118All Organisms → Viruses1002Open in IMG/M
3300031629|Ga0307985_10008358Not Available5343Open in IMG/M
3300031644|Ga0308001_10181885Not Available844Open in IMG/M
3300031647|Ga0308012_10160111Not Available885Open in IMG/M
3300031687|Ga0308008_1031359All Organisms → Viruses → Predicted Viral1309Open in IMG/M
3300031696|Ga0307995_1004260Not Available7741Open in IMG/M
3300031703|Ga0308002_1055422Not Available893Open in IMG/M
3300031773|Ga0315332_10014876All Organisms → Viruses → Predicted Viral4687Open in IMG/M
3300031774|Ga0315331_10064501All Organisms → Viruses → Predicted Viral2716Open in IMG/M
3300031774|Ga0315331_10182204All Organisms → Viruses → Predicted Viral1563Open in IMG/M
3300031775|Ga0315326_10484486All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.797Open in IMG/M
3300032011|Ga0315316_11234955Not Available599Open in IMG/M
3300032073|Ga0315315_10058387All Organisms → Viruses → Predicted Viral3572Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine27.83%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine14.78%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous10.43%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water8.70%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater6.09%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh5.22%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient4.35%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment3.48%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.48%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.48%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.61%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.74%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water1.74%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.87%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater0.87%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.87%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.87%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300006400Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006402Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007639Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02EnvironmentalOpen in IMG/M
3300007647Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02EnvironmentalOpen in IMG/M
3300007725Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MGEnvironmentalOpen in IMG/M
3300007778Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300009058Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009425Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009677Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009679Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019459Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019703Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_7-8_MGEnvironmentalOpen in IMG/M
3300019730Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_7-8_MGEnvironmentalOpen in IMG/M
3300019747Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_5-6_MGEnvironmentalOpen in IMG/M
3300019749Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_4-5_MGEnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300023702Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 82R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026504Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 46R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027813Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)EnvironmentalOpen in IMG/M
3300027859Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028137Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028338Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 15R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031140Marine microbial communities from water near the shore, Antarctic Ocean - #420EnvironmentalOpen in IMG/M
3300031143Marine microbial communities from water near the shore, Antarctic Ocean - #422EnvironmentalOpen in IMG/M
3300031167Marine microbial communities from water near the shore, Antarctic Ocean - #418EnvironmentalOpen in IMG/M
3300031175Marine microbial communities from water near the shore, Antarctic Ocean - #349EnvironmentalOpen in IMG/M
3300031510Marine microbial communities from water near the shore, Antarctic Ocean - #129EnvironmentalOpen in IMG/M
3300031542Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_331_5m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031579Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1120_Surface (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031598Marine microbial communities from water near the shore, Antarctic Ocean - #284EnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031612Marine microbial communities from water near the shore, Antarctic Ocean - #127EnvironmentalOpen in IMG/M
3300031629Marine microbial communities from Ellis Fjord, Antarctic Ocean - #80EnvironmentalOpen in IMG/M
3300031644Marine microbial communities from water near the shore, Antarctic Ocean - #5EnvironmentalOpen in IMG/M
3300031647Marine microbial communities from water near the shore, Antarctic Ocean - #179EnvironmentalOpen in IMG/M
3300031687Marine microbial communities from water near the shore, Antarctic Ocean - #125EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031703Marine microbial communities from water near the shore, Antarctic Ocean - #34EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031775Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315EnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0075503_160167923300006400AqueousMKTTATRYIQNVTKSSPVQNKVKRKAELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0075511_159469723300006402AqueousMKTTATRYIQNVTQSSPAKNKVKRKAELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0070749_1003669263300006802AqueousMKTTATRYIQNVTQSSPAKNKTKRKAELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0070754_1012355323300006810AqueousMIKPTATRFIQNVTQSSATNNKNKRKAELSKPGKYDQKVMENSKSIYTGRGTL*
Ga0070750_1003834223300006916AqueousMKTSATRYIQNVTNSSPAKNKVKRKAELSKPGKYEKKVMENSKAIYTGRGTL*
Ga0070750_1003924863300006916AqueousMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYDQKVMETSKAIYTGRGTL*
Ga0070750_1014786523300006916AqueousMKTTATRYIQNVTKSSPVQNKVKRKTELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0070748_108254043300006920AqueousMKTTATRFIQNVTKSSPTNNKTKRKAELSKPGKYEQKVMENSKPIYSGRGTL*
Ga0070747_130903013300007276AqueousMKTTATRFIQNVTKSNPTNNKNKRKAELSKPGKYEQKVMENSKPIYSGRGTL*
Ga0102865_122096313300007639EstuarineMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYDQKVMENSKSIYTGRGTL*
Ga0102855_102832223300007647EstuarineMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYDQKVMENSKAIYTGRGTL*
Ga0102951_105425253300007725WaterMEVLTEQESQMKTSATRFIQNVTKSSPTNNKNKRKTELSQPGKYEKKVMEASKPIYTGRG
Ga0102954_106395423300007778WaterMLEQESQMKVTATRFIQNVTKSSPTNNKNKRKTELSQPGKYEKKVMEASKPIYTGRGTL*
Ga0102960_118519533300009000Pond WaterMKTTATRYIQNVTHSSQAKNKVKRKAELSKPGKYEK
Ga0102960_127163413300009000Pond WaterQMKTSATRYIQNVTKSSPVKNKTKRKTELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0102957_122524013300009027Pond WaterMEVLTEQESQMKTSATRFIQNVTKSSPTNNKNKRKTELSQPGKYEKKVMEASKPIYTGRGTL*
Ga0102854_117898123300009058EstuarineMKTSATRYIQSVTKSSPTNNKNKRKTELSKPGKYEQKVMENSKAIYTGRGTL*
Ga0114995_1022971233300009172MarineMKTPTATRFIQKVTRSNPTNNKDKRKAELSTPGTFDQKVMENAKKLYTGSGIV*
Ga0114995_1038110513300009172MarineMKTPTATRFIQKVTRSNPTNNKDKRKAELSTPGKYDQKVMENTKNVYTGRGTL*
Ga0114995_1059629423300009172MarineMKTTATRYIQKVTKSNPTNNKDKRKAELSTPGKYDQKVMENTKNVYTGRGTL*
Ga0114995_1061161023300009172MarineMIKPTATRFIQKVTKSNPTNNKDKRKAELSTPGKFEQKVMENSKKLYTGRGTV*
Ga0114994_1005661823300009420MarineMKTTATRFIQRVTKSTPTKEKAKRKAELSAPGKYNQKVMDNSKSLYTGRGTL*
Ga0114994_1063878713300009420MarineEQESQMKTTATRFIQKVTKSNPTKEKTKRKAELSTPGKYDQKVMENSKSVYTGRGTL*
Ga0114998_1028878613300009422MarineMKTTATRYIQKVTKSNPTNNKDKRKAELSTPGKYEQKVMENSKAIYTGRGTL*
Ga0114997_1010636823300009425MarineMKTTATRFIQKVTRSSPTKEKSKRKAELSTPGKYDQKVMESSKSVYTGRGTI*
Ga0115564_1011881913300009505Pelagic MarineKKEQESQMIKPTATRYIQKVTQSSPVKNKVKRKTELSTPGKYEQKVMENSEAIYTGRGTI
Ga0115003_1017358943300009512MarineMIKPTATRFIQKVTKSNPTNNKDKRKAELSTPGKYEQKVMENSKKLYTGRGTV*
Ga0115003_1072675223300009512MarineMKTTATRFIQKVTKSNPTKEKTKRKAELSTPGKYDQKVMENSKSVYTGRGTL*
Ga0115003_1087781813300009512MarineATRFIQKVTRSNPTNNKDKRKAELSTPGKYDKKVMETSKAIYTGRGTL*
Ga0115004_1037883013300009526MarineATRFIQKVTKSNPTNNKDKRKAELSTPGKYDQKVMENSKKLYTGRGTV*
Ga0115004_1081978913300009526MarineESQMKTPTATRFIQKVTRSNPTNNKDKRKAELSTPGTFDQKVMENAKKLYTGSGIV*
Ga0115004_1092888923300009526MarineVTKSNPTNNKDKRKTELSTPGKFEQKVMENSKKLYTGRGTV*
Ga0115013_1055026823300009550MarineMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKAIYTGRGTL*
Ga0115011_1022865243300009593MarineMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKSIYTGRGTL*
Ga0115011_1188180013300009593MarineVTKSSPTNNKNKRKAELSKPGKYEQKVMETSKSIYTGRGTL*
Ga0115104_1068584813300009677MarineMKTTATRFIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKPIYSGRGTL*
Ga0115105_1071168423300009679MarineMKTSATRYIQSVTKSSPTNNKNKRKADLSKPGKYEKAVMETSKSIYTGRGTL*
Ga0115001_1077549913300009785MarinePTATRFIQKVTRSNPTNNKDKRKAELSTPGKYDKKVMENTKNVYTGRGTL*
Ga0115001_1094656023300009785MarineMKATRFIQNVTPIQPAKQKDKRKAELSQPGKYDKNVMKNTKDVYTGRGTL*
Ga0129348_103864723300010296Freshwater To Marine Saline GradientVTNSSPAKNKVKRKAELSKPGKYEKKVMENSKAIYTGRGTL*
Ga0129348_109613333300010296Freshwater To Marine Saline GradientMKTTATRYIQNITKSSPVQNKVKRKAELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0129345_110349423300010297Freshwater To Marine Saline GradientMKITATRYIQNVTKSSPVQNKVKRKTELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0129345_132540723300010297Freshwater To Marine Saline GradientMKTTATRYIQNVTKSSPVQNKVKRKTELSKPGKYEKKVMEASKPIYT
Ga0136656_109063433300010318Freshwater To Marine Saline GradientMKITATRYIQNVTKSSPVQNKVKRKAELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0160422_1039714913300012919SeawaterTSATRYIQNVTNNSPVKTKVKRKVELSKPGKYEQKVMENSKPIYTGRGTL*
Ga0160423_1006609923300012920Surface SeawaterMKTSATRYIQNVTNSSPVKNKVKRKAELSKPGKYEQKVMENSKPIYTGRGTL*
Ga0160423_1099835023300012920Surface SeawaterMKTSATRYIQSVTKSSPTNNKNKRKAELSKPGKYEQKVMETSKSIYTGRGTI*
Ga0163180_1144333623300012952SeawaterMKTSATRYIQNVTKSNPVKNKVKRKAELSKPGKYEKKVMEASKPIYTGRGTL*
Ga0181565_1078039523300017818Salt MarshMKTSATRYIQNVTQSSPVKNKAKRKAELSKPGKYEKKVMESSK
Ga0181552_1037169233300017824Salt MarshMKTTATRYIQNVTKSSPVQNKVKRKTELSKPGKYEKKVMEASKPIYTGRGTL
Ga0181577_1001049883300017951Salt MarshMKTSATRYIQNVTQSSPVKNKAKRKAELSKPGKYEKKVMESSKPIYTGRGTI
Ga0181600_1049810323300018036Salt MarshMKTTATRYIQNVTKSSPVQNKVKRKVELSKPGKYEKKVMEASKPIYTGRGTL
Ga0181600_1058764823300018036Salt MarshMKTTATRYIQNVTKSSPVQNKVKRKAELSKPGKYEKKVMEASKPIYTGRGTL
Ga0181562_1047809633300019459Salt MarshMKTTATRYIQNVTKSSPVQNKVKRKTELSKPGKYEKKVMEASKPIYTG
Ga0194021_100014853300019703SedimentMKTSATRYIQNVTNSSPAKNKVKRKAELSKPGKYEKKVMENSKDIYTGRGTL
Ga0194001_101441923300019730SedimentMKTSATRYIQNVTNSSPAKNKVKRKAELSKPGKYEKKAMENSKAIYTGRGTL
Ga0193978_100368313300019747SedimentQESQMKTSATRYIQNVTNSSPAKNKVKRKAELSKPGKYEKKAMENSKAIYTGRGTL
Ga0193983_100035613300019749SedimentMKTSATRYIQNVTNSSPAKNKVKRKAELSKPGKYEKKVMENSKAIYTGRGTL
Ga0206125_1013410523300020165SeawaterMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYDQKVMETSKAIYTGRGTL
Ga0206682_1008220223300021185SeawaterMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYDQKVMENSKAIYTGRGTL
Ga0222717_1000194573300021957Estuarine WaterMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKAIYTGRGTL
Ga0222717_1019228823300021957Estuarine WaterMKTTATRYIQNVTQSSPAKNKVKRKTELSKPGKYEKKVMEASKPIYTGRGTL
Ga0222717_1039807223300021957Estuarine WaterMKVTATRFIQNVTKSSPTNNKNKRKTELSQPGKYEKKVMEASKPIYTGRGTL
Ga0222718_1002121533300021958Estuarine WaterMKTSATRYIQNVTQSSPVKNKTKRKTELSQPGKYEKKVMESSKPIYTGRGTI
Ga0222718_1002199923300021958Estuarine WaterMKTTATRYIQNVTQSSPAKNKVKRKAELSKPGKYEKKVMEASKPIYTGRGTL
Ga0222718_1005299273300021958Estuarine WaterMKTSATRYIQNVTQSSPVKNKTKRKTELSKPGKYEKKVMEASKPIYTGRGTL
Ga0222718_1010569923300021958Estuarine WaterRRTRSTRPHLKEQESQMIKPTATRFIQKITKSNPTNNKNKRKAELSKPGKYEQKVMENSKAIYTGRGTL
Ga0222718_1024512523300021958Estuarine WaterMLEQESQMKVTATRFIQNVTKSSPTNNKNKRKTELSQPGKYEKKVMEASKPIYTGRGTL
Ga0222715_1045537033300021960Estuarine WaterMKTSATRYIQNVTQSSPVKNKTKRKTELSQPGKYEKKVMEASKPIYTGRGTL
Ga0222719_1077980623300021964Estuarine WaterMIKPTATRFIQKITKSNPTNNKNKRKAELSKPGKYEQKVMENSKAIYTGRGTL
Ga0232119_100525523300023702SeawaterMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKPIYTGRGTL
Ga0208643_1001312123300025645AqueousMKTTATRFIQNVTKSSPTNNKTKRKAELSKPGKYEQKVMENSKPIYSGRGTL
Ga0208898_112950123300025671AqueousMKTTATRYIQNVTQSSPAKNKTKRKAELSKPGKYEKKVMEASKPIYTGRGTL
Ga0208162_103491923300025674AqueousMKITATRYIQNVTKSSPVQNKVKRKTELSKPGKYEKKVMEASKPIYTGRGTL
Ga0209932_104954323300026183Pond WaterMKVTATRFIQNVTKSSPTKNKTKRKTELSQPGKYEKKVMEASKPIYTGRGTL
Ga0247587_113537313300026504SeawaterVEVLTEQESQMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYDQKVMENSKAIYTGRGTL
Ga0209710_101640323300027687MarineMKTPTATRFIQKVTRSNPTNNKDKRKAELSTPGTFDQKVMENAKKLYTGSGIV
Ga0209710_109572823300027687MarineMKTPTATRFIQKVTRSNPTNNKDKRKAELSTPGKYDQKVMENTKNVYTGRGTL
Ga0209710_121213123300027687MarineMKTPTATRFIQKVTRSNPTNNKDKRKAELSTPGKYDKKVMENTKNVYTGRGTL
Ga0209710_121585423300027687MarineMIKPTATRFIQKVTKSNPTNNKDKRKAELSTPGKFEQKVMENSKKLYTGRGTV
Ga0209192_1029579113300027752MarineIEQESQMKTTATRYIQKVTKSNPTNNKDKRKAELSTPGKYDQKVMENTKNVYTGRGTL
Ga0209830_1046483823300027791MarineVTKSNPTNNKDKRKTELSTPGKFEQKVMENSKKLYTGRGTV
Ga0209830_1049546023300027791MarineIKPTATRFIQKVTKSNPTNNKDKRKAELSTPGKYDQKVMENSKKLYTGRGTV
Ga0209090_1018520223300027813MarineMKTTATRFIQRVTKSTPTKEKAKRKAELSAPGKYNQKVMDNSKSLYTGRGTL
Ga0209503_1035671713300027859MarineMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKAIYTGR
Ga0209404_1101457923300027906MarineMKTSATRYIQSVTKSSPTNNKNKRKAELSKPGKYEQKVMETSKSIYTGRGTL
Ga0209404_1103243513300027906MarineMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKSIYTGRGTL
Ga0256412_117274213300028137SeawaterKEKVEVLTEQESQMKTSATRYIQNVTKSSPTNNKNKRKAELSKPGKYEQKVMENSKPIYTGRGTL
Ga0247567_105952313300028338SeawaterATRYIQNVTKSSPTNNKNKRKAELSKPGKYDQKVMENSKAIYTGRGTL
Ga0308024_101651033300031140MarineMNITPNATRYIQKVTKSTPVKEKVKRKANISTPGKYDQRIMDAAKIIYTGRGTL
Ga0308024_106786823300031140MarineMKTTATRFIQKVTRSNPTKNKDKRKSELSTPGKFDQKVMENAKNVYTGRGTL
Ga0308025_102852423300031143MarineMNITPNATRYIQKVTKSTPVKEKVKRKANVSTPGKYDQRIMDDTKSIYTGRGTI
Ga0308023_101986033300031167MarineMNITPNATRYIQKVTKSTPVKEKVKRKANVSTPGKYDQRIMDASKSIYTGRGTI
Ga0308020_121701223300031175MarineVVEQESHMKITPTRFIQKVTKSTPVKEKAKRKADLSTPGKYEQKAMDTSKSIYTGRGTL
Ga0308010_102140923300031510MarineMKITPTRFIQKVTKSTPVKEKAKRKADLSTPGKYEQKAMDTSKSIYTGRGTL
Ga0308010_112817123300031510MarineMNITPNATRYIQKVTKSTPVKEKVKRKANVSTPGKYDQRIMDAAKSIYTGRGTL
Ga0308149_102272433300031542MarineMKTTATRFIQKVTKSNPTNNKDKRKAELSTPGKYDQKVMDNSKAIYTGRGTL
Ga0307379_1129139723300031565SoilRFIQKVTRSNPTNNKDKRKAELSTPGKFEQKVMENTKSVYTGRGTL
Ga0308134_100421563300031579MarineMKTPTATRFIQKVTRSNPTNNKDKRKAELSTPGKYDKKVMETSKAIYTGRGTL
Ga0308019_1008716323300031598MarineMKITPTRFIQKVTKSTPVKEKAKRKADLSTPGKYEQKVMENSKSIYTGRGTL
Ga0308007_1000788023300031599MarineVVEQESHMNITPNATRYIQKVTKSTPVKEKVKRKANISTPGKYDQRIMDAAKSIYTGRGT
Ga0308007_1013527423300031599MarineHMKTTPNATRFIQKVTKSTPTKEKAKRKADLSTPGRYEQKAMDTSKSIYTGRGTL
Ga0308009_1011911823300031612MarineVVEQESHMNITPNATRYIQKVTKSTPVKEKVKRKANISTPGKYDQRIMDAAKIIYTGRGT
Ga0307985_1000835873300031629MarineMKTPMATRFIQKVTKSNPTNNKDKRKAGLSTPGKYDQKVMDNSKSIYTGRGTI
Ga0308001_1018188523300031644MarineVVEQESHMKTTPNATRFIQKVTKSTPTKEKAKRKADLSTPGRYEQKAMDTSKSIYTGRGT
Ga0308012_1016011123300031647MarinePNATRYIQKVTKSTPVKEKVKRKANVSTPGKYDQRIMDDTKSIYTGRGTI
Ga0308008_103135923300031687MarineMKTTPNATRFIQKVTKSTPTKEKAKRKADLSTPGRYEQKAMDTSKSIYTGRGTL
Ga0307995_100426073300031696MarineVVEQESHMNITPNATRYIQKVTKSTPVKEKVKRKANVSTPGKYDQRIMDASKSIYTGRGT
Ga0308002_105542213300031703MarineMKITPTRFIQKVTKSTPVKEKAKRKANLSTPGKYEQKAMDTSKSIYTGRGTL
Ga0315332_1001487673300031773SeawaterMKTSATRYIQNVTKSSPTNNKNKRKTELSKPGKYEQKVMENSKSIYTGRGTL
Ga0315331_1006450123300031774SeawaterMKTSATRYIQSVTKSSPTNNKNKRKTELSKPGKYEKKVMETSKSIYTGRGTL
Ga0315331_1018220423300031774SeawaterTSATRYIQSVTKSSPTNNKNKRKADLSKPGKYEQKVMENSKAIYTGRGTL
Ga0315326_1048448613300031775SeawaterMKTSATRYIQSVTKSSPTNNKNKRKTELSKPGKYEKKVMETSKS
Ga0315316_1123495523300032011SeawaterMKTSATRYIQSVTKSSPTNNKNKRKAELSKPGKYEKKVMETSKSIYTGRGTL
Ga0315315_1005838763300032073SeawaterMKTSATRYIQSVTKSSPTNNKNKRKADLSKPGKYEQKVMENSKAIYTGRGTL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.