NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080072

Metagenome / Metatranscriptome Family F080072

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080072
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 93 residues
Representative Sequence LDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKEPSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAA
Number of Associated Samples 110
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 17.39 %
% of genes near scaffold ends (potentially truncated) 29.57 %
% of genes from short scaffolds (< 2000 bps) 83.48 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(22.609 % of family members)
Environment Ontology (ENVO) Unclassified
(49.565 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(89.565 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.23%    β-sheet: 3.19%    Coil/Unstructured: 59.57%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF13664DUF4149 22.61
PF00106adh_short 6.09
PF07719TPR_2 1.74
PF00497SBP_bac_3 0.87
PF02776TPP_enzyme_N 0.87
PF07364DUF1485 0.87
PF13432TPR_16 0.87
PF01564Spermine_synth 0.87
PF00701DHDPS 0.87
PF02894GFO_IDH_MocA_C 0.87
PF02775TPP_enzyme_C 0.87
PF02515CoA_transf_3 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG03294-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyaseCell wall/membrane/envelope biogenesis [M] 1.74
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.87
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.87
COG5476Microcystin degradation protein MlrC, contains DUF1485 domainGeneral function prediction only [R] 0.87

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000224|SI34jun09_10mDRAFT_1040571All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300001353|JGI20159J14440_10024243All Organisms → cellular organisms → Bacteria → Proteobacteria2752Open in IMG/M
3300001355|JGI20158J14315_10016051All Organisms → cellular organisms → Bacteria → Proteobacteria3982Open in IMG/M
3300001936|GOS2220_1006410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1553Open in IMG/M
3300001941|GOS2219_1021393All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300001943|GOS2226_1031768All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1762Open in IMG/M
3300001952|GOS2224_1009968All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3815Open in IMG/M
3300003216|JGI26079J46598_1026122All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1398Open in IMG/M
3300003409|JGI26088J50261_1001274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria13804Open in IMG/M
3300003427|JGI26084J50262_1029257All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1555Open in IMG/M
3300003583|JGI26253J51717_1013614All Organisms → cellular organisms → Bacteria → Proteobacteria2121Open in IMG/M
3300003592|JGI26246J51724_1057561All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300003617|JGI26082J51739_10103274All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300003621|JGI26083J51738_10034787All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1386Open in IMG/M
3300004369|Ga0065726_12046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria27846Open in IMG/M
3300005748|Ga0076925_1018698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1801Open in IMG/M
3300005837|Ga0078893_10767074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.782Open in IMG/M
3300006027|Ga0075462_10012052All Organisms → cellular organisms → Bacteria → Proteobacteria2793Open in IMG/M
3300006404|Ga0075515_10522289All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300006637|Ga0075461_10000769All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria9435Open in IMG/M
3300006870|Ga0075479_10068533All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300007234|Ga0075460_10011057All Organisms → cellular organisms → Bacteria → Proteobacteria3597Open in IMG/M
3300007647|Ga0102855_1169166All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300007863|Ga0105744_1065487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.896Open in IMG/M
3300007954|Ga0105739_1072455All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300009003|Ga0102813_1219287All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300009054|Ga0102826_1097320All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300009071|Ga0115566_10335014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.885Open in IMG/M
3300009193|Ga0115551_1147251All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300009193|Ga0115551_1208442All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300009440|Ga0115561_1372752All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300009447|Ga0115560_1240304All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300009496|Ga0115570_10132450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1183Open in IMG/M
3300009496|Ga0115570_10278433All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300009496|Ga0115570_10449889All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300009507|Ga0115572_10491569All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300009508|Ga0115567_10951056All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300016724|Ga0182048_1180493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1850Open in IMG/M
3300016745|Ga0182093_1635718All Organisms → cellular organisms → Bacteria → Proteobacteria2158Open in IMG/M
3300016749|Ga0182053_1139379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.753Open in IMG/M
3300016791|Ga0182095_1319382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1367Open in IMG/M
3300017824|Ga0181552_10352053All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300017824|Ga0181552_10508553All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300017956|Ga0181580_10042229All Organisms → cellular organisms → Bacteria → Proteobacteria3484Open in IMG/M
3300018036|Ga0181600_10180166All Organisms → cellular organisms → Bacteria1146Open in IMG/M
3300018041|Ga0181601_10618972All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300018410|Ga0181561_10314107All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300018413|Ga0181560_10493584All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300018415|Ga0181559_10671857All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300018416|Ga0181553_10653170All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300018426|Ga0181566_10963519All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300018876|Ga0181564_10431065All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300020051|Ga0181555_1154461All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300020055|Ga0181575_10157920All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300020165|Ga0206125_10067386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1638Open in IMG/M
3300020177|Ga0181596_10065223All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.2026Open in IMG/M
3300020189|Ga0181578_10103313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1599Open in IMG/M
3300020385|Ga0211677_10020266All Organisms → cellular organisms → Bacteria → Proteobacteria3345Open in IMG/M
3300020438|Ga0211576_10169654All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300021085|Ga0206677_10072630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1701Open in IMG/M
3300021185|Ga0206682_10399940All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300021958|Ga0222718_10085526All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1890Open in IMG/M
3300022909|Ga0255755_1115077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1146Open in IMG/M
(restricted) 3300022920|Ga0233426_10003855All Organisms → cellular organisms → Bacteria → Proteobacteria11552Open in IMG/M
(restricted) 3300022920|Ga0233426_10330246All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300022923|Ga0255783_10256239All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300022925|Ga0255773_10142301All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1176Open in IMG/M
3300022935|Ga0255780_10435138All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300023081|Ga0255764_10252647All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300023170|Ga0255761_10175834All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300023709|Ga0232122_1041307All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300024230|Ga0228638_1016223All Organisms → cellular organisms → Bacteria → Proteobacteria2330Open in IMG/M
(restricted) 3300024264|Ga0233444_10291376All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300024292|Ga0228630_1109481All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300024293|Ga0228651_1076037All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300024318|Ga0233400_1032289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1412Open in IMG/M
3300024320|Ga0233398_1110662All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300024321|Ga0228626_1089471All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300024322|Ga0228656_1050999All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300024334|Ga0228671_1131044All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300024348|Ga0244776_10600027All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300024417|Ga0228650_1027450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1717Open in IMG/M
3300025608|Ga0209654_1000582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria34507Open in IMG/M
3300025626|Ga0209716_1074182All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300025641|Ga0209833_1167041All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300025653|Ga0208428_1050824All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1260Open in IMG/M
3300025680|Ga0209306_1124349All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300025694|Ga0209406_1099821All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300025701|Ga0209771_1057972All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1400Open in IMG/M
3300025709|Ga0209044_1235851All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300025712|Ga0209305_1141692All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300025830|Ga0209832_1225916All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300025876|Ga0209223_10011642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6819Open in IMG/M
3300025886|Ga0209632_10380923All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300025897|Ga0209425_10393673All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300026130|Ga0209961_1030378All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1152Open in IMG/M
3300026183|Ga0209932_1006116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3356Open in IMG/M
3300026187|Ga0209929_1006369All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3976Open in IMG/M
3300026447|Ga0247607_1018702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1145Open in IMG/M
3300026511|Ga0233395_1040329All Organisms → cellular organisms → Bacteria → Proteobacteria1435Open in IMG/M
3300026513|Ga0247590_1060937All Organisms → cellular organisms → Bacteria974Open in IMG/M
3300026517|Ga0228607_1038564All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1227Open in IMG/M
3300027757|Ga0208671_10069019All Organisms → cellular organisms → Bacteria1305Open in IMG/M
3300028132|Ga0228649_1107512All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300028133|Ga0228609_1183120All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300028279|Ga0228613_1062803All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300028282|Ga0256413_1241306All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300028297|Ga0228617_1086445All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300028414|Ga0228627_1115246All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300031621|Ga0302114_10184415All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300031766|Ga0315322_10760870All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300031774|Ga0315331_10164919All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → unclassified Candidatus Puniceispirillum → Candidatus Puniceispirillum sp.1652Open in IMG/M
3300031851|Ga0315320_10457767All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300032047|Ga0315330_10188522All Organisms → cellular organisms → Bacteria1338Open in IMG/M
3300032073|Ga0315315_10764489All Organisms → cellular organisms → Bacteria881Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh22.61%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater16.52%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine13.91%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine13.04%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater6.09%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.22%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine4.35%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine4.35%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.61%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water1.74%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine1.74%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.74%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.87%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.87%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.87%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.87%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.87%
WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water0.87%
SalineEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline0.87%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000224Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 10mEnvironmentalOpen in IMG/M
3300001353Pelagic Microbial community sample from North Sea - COGITO 998_met_09EnvironmentalOpen in IMG/M
3300001355Pelagic Microbial community sample from North Sea - COGITO 998_met_08EnvironmentalOpen in IMG/M
3300001936Marine microbial communities from Halifax, Nova Scotia, Canada - GS004EnvironmentalOpen in IMG/M
3300001941Marine microbial communities from Browns Bank, Gulf of Maine - GS003EnvironmentalOpen in IMG/M
3300001943Marine microbial communities from Cape May, New Jersey, USA - GS010EnvironmentalOpen in IMG/M
3300001952Marine microbial communities from Newport Harbor, Rhode Island, USA - GS008EnvironmentalOpen in IMG/M
3300003216Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNAEnvironmentalOpen in IMG/M
3300003409Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNAEnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300003583Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_100m_DNAEnvironmentalOpen in IMG/M
3300003592Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNAEnvironmentalOpen in IMG/M
3300003617Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNAEnvironmentalOpen in IMG/M
3300003621Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNAEnvironmentalOpen in IMG/M
3300004369Saline microbial communities from the South Caspian sea - cas-15EnvironmentalOpen in IMG/M
3300005748Seawater microbial communities from Vineyard Sound, MA, USA - control T7EnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006404Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006870Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007647Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02EnvironmentalOpen in IMG/M
3300007863Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459B_0.2umEnvironmentalOpen in IMG/M
3300007954Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2umEnvironmentalOpen in IMG/M
3300009003Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725EnvironmentalOpen in IMG/M
3300009054Estuarine microbial communities from the Columbia River estuary - metaG S.737EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009440Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512EnvironmentalOpen in IMG/M
3300009447Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509EnvironmentalOpen in IMG/M
3300009496Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009508Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412EnvironmentalOpen in IMG/M
3300016724Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011507AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016745Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016749Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016791Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018426Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020051Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020177Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020189Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020385Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300022909Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaGEnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300022923Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaGEnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300022935Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaGEnvironmentalOpen in IMG/M
3300023081Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaGEnvironmentalOpen in IMG/M
3300023170Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaGEnvironmentalOpen in IMG/M
3300023709Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024230Seawater microbial communities from Monterey Bay, California, United States - 48DEnvironmentalOpen in IMG/M
3300024264 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_10_MGEnvironmentalOpen in IMG/M
3300024292Seawater microbial communities from Monterey Bay, California, United States - 37DEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024318Seawater microbial communities from Monterey Bay, California, United States - 46DEnvironmentalOpen in IMG/M
3300024320Seawater microbial communities from Monterey Bay, California, United States - 38DEnvironmentalOpen in IMG/M
3300024321Seawater microbial communities from Monterey Bay, California, United States - 31DEnvironmentalOpen in IMG/M
3300024322Seawater microbial communities from Monterey Bay, California, United States - 68DEnvironmentalOpen in IMG/M
3300024334Seawater microbial communities from Monterey Bay, California, United States - 89DEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024417Seawater microbial communities from Monterey Bay, California, United States - 62DEnvironmentalOpen in IMG/M
3300025608Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025641Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025680Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)EnvironmentalOpen in IMG/M
3300025694Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)EnvironmentalOpen in IMG/M
3300025701Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025709Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_130m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025712Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300026130Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026183Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300026447Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 125R_r (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026511Seawater microbial communities from Monterey Bay, California, United States - 27DEnvironmentalOpen in IMG/M
3300026513Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 51R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026517Seawater microbial communities from Monterey Bay, California, United States - 8DEnvironmentalOpen in IMG/M
3300027757Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)EnvironmentalOpen in IMG/M
3300028132Seawater microbial communities from Monterey Bay, California, United States - 61DEnvironmentalOpen in IMG/M
3300028133Seawater microbial communities from Monterey Bay, California, United States - 10DEnvironmentalOpen in IMG/M
3300028279Seawater microbial communities from Monterey Bay, California, United States - 14DEnvironmentalOpen in IMG/M
3300028282Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028297Seawater microbial communities from Monterey Bay, California, United States - 18DEnvironmentalOpen in IMG/M
3300028414Seawater microbial communities from Monterey Bay, California, United States - 33DEnvironmentalOpen in IMG/M
3300031621Marine microbial communities from Western Arctic Ocean, Canada - AG5_SurfaceEnvironmentalOpen in IMG/M
3300031766Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515EnvironmentalOpen in IMG/M
3300031774Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300032047Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915EnvironmentalOpen in IMG/M
3300032073Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SI34jun09_10mDRAFT_104057113300000224MarineRQSNDNLLPIRPRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALANKIGLDADYKL*
JGI20159J14440_1002424353300001353Pelagic MarineLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDADYKL*
JGI20158J14315_1001605173300001355Pelagic MarineLRVFLCDXYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDADYKL*
GOS2220_100641033300001936MarineLDAAAAHQLNDNFLPIRPRSNLRVFLCDKDGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPYRSKSSPDMLSVFALAGRIGFDAAYKL*
GOS2219_102139313300001941MarineAAARQLNDNPLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL*
GOS2226_103176833300001943MarineLDAAAVRQSNDNLLPIRLRSNLHVFLCDSSGVIEPSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLGADYKL*
GOS2224_100996853300001952MarineLDAAAARQLNDNFLPIRPRSNLRVFLCDKDGAKEPSHQFFRLSTLESNDVLIAQHWQESNEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
JGI26079J46598_102612233300003216MarineLDAAAVRRSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
JGI26088J50261_100127463300003409MarineMRQSNDNLLPIRLRSNLHVFLCDRYXVXEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
JGI26084J50262_102925723300003427MarineMRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
JGI26253J51717_101361443300003583MarineLRVFLCDKDGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAA*
JGI26246J51724_105756133300003592MarineAAAHQLNDNLLPIRPRSNLRVFLCDKDGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAA*
JGI26082J51739_1010327423300003617MarineLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAA*
JGI26083J51738_1003478723300003621MarineMRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALAXKIGLDADYKL*
Ga0065726_12046163300004369SalineLDAAAAHQLNDNLLPIRPRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKSGKSDHPYCSNSSPEMLSVFPFASKIGLGAAYKI*
Ga0076925_101869833300005748MarineVRQSNDNFLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
Ga0078893_1076707413300005837Marine Surface WaterMRQSNDNLLPIQLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALA
Ga0075462_1001205243300006027AqueousVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
Ga0075515_1052228913300006404AqueousLDAAAAHQLNDNLLPIRPRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
Ga0075461_1000076913300006637AqueousLDAAAAHQLNDNLLPIRPRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKSGKSDHPYCSNSSPEMLSVFPFASKIGLCAAYKI*
Ga0075479_1006853313300006870AqueousVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFHLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
Ga0075460_1001105773300007234AqueousLDAAAAHQLNDNLLPIRPRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSDHPCRSNSSPEMLSVFALAGRIGLDAA*
Ga0102855_116916613300007647EstuarineLDAAAARQLNDNLLPIPLQSNLHVFLCDKHGAKESSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSRHPCLLNSSPEMLSVFALAGRIGLGASTSYDAFQPL*
Ga0105744_106548713300007863Estuary WaterLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKELSHQFFCLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLPPEMLSVFALASKIGLDADYKL*
Ga0105739_107245523300007954Estuary WaterLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKESSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSRHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQLL*
Ga0102813_121928723300009003EstuarineLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKEPSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAA*
Ga0102826_109732013300009054EstuarineLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKELSHQFFCLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
Ga0115566_1033501423300009071Pelagic MarineLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL*
Ga0115551_114725133300009193Pelagic MarineLDAAAAHQLNDNLLPIRPRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDADYKL*
Ga0115551_120844223300009193Pelagic MarineLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDNVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL*
Ga0115561_137275213300009440Pelagic MarineLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDNVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL*
Ga0115560_124030413300009447Pelagic MarineIPLRSNLHVFLCDKYGAKASSHQFFHLLVLESSDVLIVQHWQEWTGDKVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDVFQPL*
Ga0115570_1013245033300009496Pelagic MarineLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCLLNSSPEILSVFVLAGRIGLDASTSYDAFKPL*
Ga0115570_1027843323300009496Pelagic MarineWQFLDAAAVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL*
Ga0115570_1044988913300009496Pelagic MarineLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSGHPCLLNSSPEMLSVFALAGRIGLDADYKL*
Ga0115572_1049156913300009507Pelagic MarineLDAAAARQTNDNLLPIRLRSSLHVFLCDKYGAKEPSHPFFRLSALESNDVLIVQHWQESPEGIVGKLGNPFRSNSSPEMLSVFALASKIGLDADYKL*
Ga0115567_1095105623300009508Pelagic MarineFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQEWTEDKAGKLGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL*
Ga0182048_118049323300016724Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKEGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0182093_163571843300016745Salt MarshLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0182053_113937923300016749Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADY
Ga0182095_131938223300016791Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0181552_1035205323300017824Salt MarshLNDNFLPILPRSNLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGYPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0181552_1050855323300017824Salt MarshWQFLDAAAVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFHLLVLESNDVLIAQHWQESTEDKEGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0181580_1004222943300017956Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0181600_1018016643300018036Salt MarshWQFLDAAAVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFHLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0181601_1061897213300018041Salt MarshLRVFLSDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKACKSGHPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0181561_1031410723300018410Salt MarshLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0181560_1049358413300018413Salt MarshPRSNLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0181559_1067185713300018415Salt MarshPRSNLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGYPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0181553_1065317013300018416Salt MarshRSNLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGYPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0181566_1096351923300018426Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPPHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0181564_1043106523300018876Salt MarshLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGHSCRSKSSPEMLSVFALAGRIGFDTAYKL
Ga0181555_115446133300020051Salt MarshWQFLDAAAVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0181575_1015792033300020055Salt MarshFLDAAAVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0206125_1006738633300020165SeawaterVRRSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0181596_1006522323300020177Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFHLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0181578_1010331333300020189Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFLLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0211677_1002026643300020385MarineLDAAAARQLNDNFLPIRLRSNLHVFLCDKYGAKELSHQFFCLLVLESNGVLIAQHWQEATEDKAGKWGHPCLLNLSPEMLSVFALAGRMGLDASTSYDAFQPL
Ga0211576_1016965413300020438MarineWQFLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKELSHQFFCLLVLESNDVLIAQHWQEATEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0206677_1007263013300021085SeawaterLRSNLHVFLCDKHGAKESSHQFFRLLVLESNDVLIAQHWQEWNGDKAGKLGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0206682_1039994013300021185SeawaterNDNLLPIRLRSNLHVFLCDKYGAKELSHQFFCLLVLESNDVLIAQHWQEATEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0222718_1008552633300021958Estuarine WaterMRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0255755_111507723300022909Salt MarshLDAAAAHQLNDNFLPILPRSNLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCRSKSSPEMLSVFALAGRIGFDAAYKL
(restricted) Ga0233426_1000385543300022920SeawaterLDAAAARQLNDDLLPIRLRSNLHVFLCDKYGAKELSHQFFCLLVLESNDVLIAQHWQEATEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
(restricted) Ga0233426_1033024623300022920SeawaterLDAAAVRQSNDNLLPIRPRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQKSTEDKAGKSDHPYRSNLSPDMLSVFALASKIGLDAD
Ga0255783_1025623923300022923Salt MarshLDAAAAHQLNDNFLPIRPRSNLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCRSKSSPEMLSVFALAGRIGFDAAYKL
Ga0255773_1014230133300022925Salt MarshVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFHLLVLESNDVLIAQHWQESTEDKEGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0255780_1043513813300022935Salt MarshAAVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0255764_1025264733300023081Salt MarshNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0255761_1017583413300023170Salt MarshDAAAAHQLNDNFLPILPRSNLRVFLCDRYGVKEPIHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0232122_104130733300023709Salt MarshLDAAAVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFHLLVLESNDVLIAQHWQESTEDKEGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0228638_101622333300024230SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDALIAQHWQESTEDKAGKSGHPCLLNSSPQILSVFALAGRIGLDASTSYDAFKPL
(restricted) Ga0233444_1029137613300024264SeawaterLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESNDVLILQHWQEWTGDKVGKSGHPCLLNPSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0228630_110948123300024292SeawaterLDAAAARQLNDNLLPIRLRSNLRVFLCGKYGAKERFHQFFPLLVLESNDVLIAQHWQESTEDKAGKSGHPCLLNSSPEILSVFVLAGRIGLDA
Ga0228651_107603713300024293SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDVLIAQHWQELTEDKAGKLGHPCLLNSSPEILSVFALAGRIGLDASTSYDAFKPL
Ga0233400_103228923300024318SeawaterLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKELSHQFFCLLVLESNDVLIAQHWQEATEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0233398_111066213300024320SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDVLIAQHWQEWNGDKAGKLGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0228626_108947113300024321SeawaterLDAAAARQLNDNLLPILLRSNLHVFLCDKHGAKESSHQFFRLLVLESNDVLIAQHWQEWNGDKAGKLGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0228656_105099913300024322SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPFLLNSSPQILSVFALAGRIGLDASTSYDAFKPL
Ga0228671_113104413300024334SeawaterLDAAAARQLNDNLLPIRLRSNLHVFLCDKHGAKESSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0244776_1060002723300024348EstuarineLRVFLCDKYGAKELSHQFFCLLVLESNDVLIAQHWQEATEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0228650_102745013300024417SeawaterLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKESSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSRHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0209654_1000582153300025608MarineMRQSNDNLLPIRLRSNLHVFLCDRYGVLEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0209716_107418223300025626Pelagic MarineLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAA
Ga0209833_116704113300025641Pelagic MarineLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSGHPCLLNSSPEMLSVFALAGRIGL
Ga0208428_105082443300025653AqueousLHVFLCDRYGVIEPPHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0209306_112434913300025680Pelagic MarineLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0209406_109982123300025694Pelagic MarineLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0209771_105797243300025701MarineRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAA
Ga0209044_123585113300025709MarineLDAAAARQLNDNLLPIPLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNSSPEMLSVLTFASKTGLDAPYKL
Ga0209305_114169213300025712Pelagic MarineLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKASSHQFFRLLVLESSDVLIVQHWQEWTGDNVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0209832_122591613300025830Pelagic MarineVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0209223_1001164283300025876Pelagic MarineLDAAAAHQLNDNLLPIRPRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKSGKSDHPYRSNLSPEMLSVFALAGRIGLDADYKL
Ga0209632_1038092313300025886Pelagic MarineLNDNLLPVRPRSNLRVFLCDKYGAKEPFHQFFRLSTLESNDVLIAQHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDADYKL
Ga0209425_1039367323300025897Pelagic MarineLDAVAARQLNDNLLPIRLRSNLRVFLCDKYGAKEPFHRFFRLSALESNDVLIAQHWQELTEDKAGKSGHPCRSNSSPEMLSVFAFAGRIDLDGAYKL
Ga0209961_103037823300026130WaterVRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKARKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0209932_100611663300026183Pond WaterHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0209929_100636963300026187Pond WaterWQFLDAAAMRQSNDNLLPIRLRSNLHVFLCDRYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0247607_101870233300026447SeawaterLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKERSHQFFRLLVLESNDVLIAQHWQEWNGDKAGKLGHPCLLNSSPEMLSVFALASKIGLDAAYKL
Ga0233395_104032913300026511SeawaterLDAAAARQLNDNLLPIRLRSNLHVFLCDKYGAKELSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0247590_106093713300026513SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLALESNDALIAQHWQESTEDKAGKSGHPCLLNSSPEMLSVFALAGRIGLVASTSYDAFQPL
Ga0228607_103856413300026517SeawaterLDAAAACQLNDNLLPIRLRSNLHVFLCGKYDAKERFHQFFRLLVLESNDVLIAQHWQEWTEDKAGKLGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFKPL
Ga0208671_1006901923300027757EstuarineVRRSNDNLLPIRLRSNLHVFLCERYGVIEPSHRFFRLLVLESNDVLIAQHWQESTEDKAGKSDHPYRSNLSPEMLSVFALASKIGLDADYKL
Ga0228649_110751223300028132SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQLL
Ga0228609_118312013300028133SeawaterLNDNLLPIPLRSNLHVFLCDKYGAKESSHQFFRLLVLESNDVLIAQHWQEWTEDKAGKLGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0228613_106280323300028279SeawaterLDAAAACQLNDNLLPIRLRSNLHVFLCDKYGAKESSHQFFRLLVLESNDVLIAQHWQEWNGDKAGKLGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0256413_124130613300028282SeawaterLDVAAACQLNDSLLPIRLRSNLRVFLYDRYDAKEPSHLFFRLSALGSNDVLIARHWQESTEDKAGKSGHPCRSNSSPEMLSVFALAGRIGLDAAYKL
Ga0228617_108644513300028297SeawaterLDAAAACQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLALESNDALIAQHWQESTEDKAGKSGHPCLLNSSPQILSVFALAGRIGLDASTSYDAFKPL
Ga0228627_111524613300028414SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFSRLLVLESNDALIAQHWQESTEDKAGKSGHPFLLNSSPQILSVFALAGRIGLDASTSYDAFRPL
Ga0302114_1018441523300031621MarineLNDNLLPVRLRSNLRVFLCDKYGAKELFHQFFHLSALGSNDVSIAQHWQESIEDKVGKSGHPCRSNSSPNMLSVFAFAGRIGLDAAYKL
Ga0315322_1076087013300031766SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDVLIAQHWQEATEDKAGKSGHPCLLNLSPEMLSVFALAGRIGLDASTSYDAFQPL
Ga0315331_1016491933300031774SeawaterLDAAAARQLNDNLLPIPLRSNLHVFLCDKYGAKESSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSRHPCLLNSSPEMLSVFALAGRIGLGASTSYDAFQPL
Ga0315320_1045776723300031851SeawaterLDAAAARQLNDNLLPIRLRSNLHVFPCDKYGAKESSHQFFRLLVLESNDALIAQHWQESTEDKAGKSGHPFLLNSSPQILSVFALAGRIGLDASTSYDAFKPL
Ga0315330_1018852223300032047SeawaterLHVFPCDKYGAKESSHQFFRLLVLESSDVLIVQHWQEWTGDKVGKSGHPCLLNSSPEMLSVFALAGRIGLDASTSYDAFEPL
Ga0315315_1076448913300032073SeawaterVFLCGKYGVKGRSHQFFRLLVLESNDVLIAQHWQESTEDKAGKSGHPFLLNSSPQILSVFALAGRIGLDASTSYDAFKPL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.