Metagenome / Metatranscriptome Family F080044

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	62 residues
Representative Sequence	MPNLNEFLNKKIEQKEYNLENLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ
Number of Associated Samples	70
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	76.52 %
% of genes near scaffold ends (potentially truncated)	15.65 %
% of genes from short scaffolds (< 2000 bps)	68.70 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (80.870 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (20.870 % of family members)
Environment Ontology (ENVO)	Unclassified (42.609 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (60.870 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.44% β-sheet: 22.22% Coil/Unstructured: 73.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00154	RecA	29.57
PF07235	DUF1427	13.04
PF00436	SSB	5.22
PF12705	PDDEXK_1	5.22
PF03819	MazG	3.48
PF00565	SNase	2.61
PF02075	RuvC	1.74
PF01930	Cas_Cas4	1.74
PF03796	DnaB_C	0.87
PF05050	Methyltransf_21	0.87
PF01391	Collagen	0.87
PF13384	HTH_23	0.87
PF02467	Whib	0.87
PF13640	2OG-FeII_Oxy_3	0.87
PF13385	Laminin_G_3	0.87
PF13884	Peptidase_S74	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	29.57
COG4317	Xanthosine utilization system component, XapX domain	Nucleotide transport and metabolism [F]	13.04
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	5.22
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	5.22
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	1.74
COG1468	CRISPR/Cas system-associated exonuclease Cas4, RecB family	Defense mechanisms [V]	1.74
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.87
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.09 %
Unclassified	root	N/A	13.91 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	84.35 %
Unclassified	root	N/A	13.91 %
cellular organisms	root	All Organisms → cellular organisms	1.74 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	80.87 %
Unclassified	root	N/A	13.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	80.87 %
Unclassified	root	N/A	13.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	80.87 %
Unclassified	root	N/A	13.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	80.87 %
Unclassified	root	N/A	13.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	66.09 %
Unclassified	root	N/A	13.91 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	6.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	66.09 %
Unclassified	root	N/A	13.91 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	6.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	66.09 %
Unclassified	root	N/A	13.91 %
Samistivirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus	6.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	66.09 %
Unclassified	root	N/A	13.91 %
Streptomyces virus Jay2Jay	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay	6.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	66.09 %
Unclassified	root	N/A	13.91 %
Streptomyces phage Jay2Jay	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	6.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002161\|JGI24766J26685_10144361	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M
3300002835\|B570J40625_100084832	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4054	Open in IMG/M
3300002835\|B570J40625_101463434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300003413\|JGI25922J50271_10000004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	81537	Open in IMG/M
3300003430\|JGI25921J50272_10021401	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1733	Open in IMG/M
3300004112\|Ga0065166_10434820	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	551	Open in IMG/M
3300004125\|Ga0066182_10047038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	961	Open in IMG/M
3300005517\|Ga0070374_10287150	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	836	Open in IMG/M
3300005527\|Ga0068876_10667808	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	558	Open in IMG/M
3300005662\|Ga0078894_10009182	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7720	Open in IMG/M
3300005662\|Ga0078894_10371923	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1293	Open in IMG/M
3300005662\|Ga0078894_10588222	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	992	Open in IMG/M
3300005662\|Ga0078894_10613791	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	967	Open in IMG/M
3300005662\|Ga0078894_10622463	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	959	Open in IMG/M
3300005662\|Ga0078894_10647482	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	937	Open in IMG/M
3300005662\|Ga0078894_10698683	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	895	Open in IMG/M
3300005662\|Ga0078894_10702582	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	892	Open in IMG/M
3300005662\|Ga0078894_10718534	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	880	Open in IMG/M
3300005662\|Ga0078894_10848897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	795	Open in IMG/M
3300005662\|Ga0078894_10883711	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	776	Open in IMG/M
3300005941\|Ga0070743_10002108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7531	Open in IMG/M
3300006484\|Ga0070744_10044048	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1310	Open in IMG/M
3300007547\|Ga0102875_1070841	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1128	Open in IMG/M
3300007551\|Ga0102881_1021705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1807	Open in IMG/M
3300007560\|Ga0102913_1312055	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	502	Open in IMG/M
3300007585\|Ga0102916_1052612	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1066	Open in IMG/M
3300007597\|Ga0102919_1070256	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1096	Open in IMG/M
3300007603\|Ga0102921_1296245	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	577	Open in IMG/M
3300007624\|Ga0102878_1017439	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2295	Open in IMG/M
3300007624\|Ga0102878_1048710	Not Available	1295	Open in IMG/M
3300007625\|Ga0102870_1123446	Not Available	750	Open in IMG/M
3300007692\|Ga0102823_1012917	Not Available	2389	Open in IMG/M
3300008052\|Ga0102893_1022300	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1942	Open in IMG/M
3300008107\|Ga0114340_1000680	Not Available	22424	Open in IMG/M
3300008107\|Ga0114340_1002788	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10048	Open in IMG/M
3300008107\|Ga0114340_1003421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8882	Open in IMG/M
3300008107\|Ga0114340_1005474	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7364	Open in IMG/M
3300008107\|Ga0114340_1006502	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6105	Open in IMG/M
3300008107\|Ga0114340_1045309	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1949	Open in IMG/M
3300008107\|Ga0114340_1088434	All Organisms → Viruses → Predicted Viral	1263	Open in IMG/M
3300008107\|Ga0114340_1134404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	935	Open in IMG/M
3300008107\|Ga0114340_1151917	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	852	Open in IMG/M
3300008107\|Ga0114340_1247656	Not Available	548	Open in IMG/M
3300008107\|Ga0114340_1255370	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	533	Open in IMG/M
3300008110\|Ga0114343_1003781	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10052	Open in IMG/M
3300008110\|Ga0114343_1120657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	878	Open in IMG/M
3300008110\|Ga0114343_1147177	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	755	Open in IMG/M
3300008113\|Ga0114346_1182597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	858	Open in IMG/M
3300008116\|Ga0114350_1000359	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	75916	Open in IMG/M
3300008120\|Ga0114355_1226320	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	571	Open in IMG/M
3300008261\|Ga0114336_1048637	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2211	Open in IMG/M
3300008962\|Ga0104242_1005383	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2343	Open in IMG/M
3300008962\|Ga0104242_1051033	Not Available	697	Open in IMG/M
3300008962\|Ga0104242_1052381	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	687	Open in IMG/M
3300009059\|Ga0102830_1034443	Not Available	1561	Open in IMG/M
3300009158\|Ga0114977_10614469	Not Available	585	Open in IMG/M
3300009194\|Ga0114983_1069840	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	800	Open in IMG/M
3300009419\|Ga0114982_1008682	All Organisms → Viruses → Predicted Viral	3661	Open in IMG/M
3300009419\|Ga0114982_1021150	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300009419\|Ga0114982_1057583	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1220	Open in IMG/M
3300010354\|Ga0129333_10000063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	63004	Open in IMG/M
3300012663\|Ga0157203_1001128	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6774	Open in IMG/M
3300012665\|Ga0157210_1002396	All Organisms → cellular organisms → Bacteria	4880	Open in IMG/M
3300012665\|Ga0157210_1007483	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2061	Open in IMG/M
3300013004\|Ga0164293_10000168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	45886	Open in IMG/M
3300013004\|Ga0164293_10249824	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1253	Open in IMG/M
3300013004\|Ga0164293_10256980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1230	Open in IMG/M
3300020141\|Ga0211732_1223779	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	664	Open in IMG/M
3300020159\|Ga0211734_10945710	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1873	Open in IMG/M
3300020172\|Ga0211729_11157214	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3984	Open in IMG/M
3300020205\|Ga0211731_11057454	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15337	Open in IMG/M
3300020205\|Ga0211731_11104410	Not Available	885	Open in IMG/M
3300020487\|Ga0208200_101480	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	1983	Open in IMG/M
3300020487\|Ga0208200_112208	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	692	Open in IMG/M
3300020541\|Ga0208359_1039959	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	709	Open in IMG/M
3300020546\|Ga0208853_1055975	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	609	Open in IMG/M
3300021438\|Ga0213920_1013216	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	2288	Open in IMG/M
3300021961\|Ga0222714_10142851	Not Available	1447	Open in IMG/M
3300021961\|Ga0222714_10247186	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1003	Open in IMG/M
3300021963\|Ga0222712_10000980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	36409	Open in IMG/M
3300024343\|Ga0244777_10000080	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	71570	Open in IMG/M
3300024343\|Ga0244777_10308959	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	997	Open in IMG/M
3300024346\|Ga0244775_10576369	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	915	Open in IMG/M
3300024346\|Ga0244775_10738010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	791	Open in IMG/M
3300024346\|Ga0244775_11171604	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	600	Open in IMG/M
3300027127\|Ga0255071_1064381	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522	Open in IMG/M
3300027197\|Ga0208922_1008039	Not Available	2087	Open in IMG/M
3300027224\|Ga0208164_1028546	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	1032	Open in IMG/M
3300027247\|Ga0208679_1043636	Not Available	860	Open in IMG/M
3300027518\|Ga0208787_1154283	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	511	Open in IMG/M
3300027563\|Ga0209552_1135475	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	641	Open in IMG/M
3300027689\|Ga0209551_1070270	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	1148	Open in IMG/M
3300027710\|Ga0209599_10000189	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	43138	Open in IMG/M
3300027710\|Ga0209599_10007571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	3525	Open in IMG/M
3300027710\|Ga0209599_10018094	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	2017	Open in IMG/M
3300027759\|Ga0209296_1002705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12510	Open in IMG/M
3300027769\|Ga0209770_10000025	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	91481	Open in IMG/M
3300027769\|Ga0209770_10243397	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	699	Open in IMG/M
3300027805\|Ga0209229_10123741	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1166	Open in IMG/M
3300027805\|Ga0209229_10136003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1108	Open in IMG/M
3300027805\|Ga0209229_10290348	Not Available	722	Open in IMG/M
3300027816\|Ga0209990_10317877	Not Available	694	Open in IMG/M
3300027892\|Ga0209550_10395888	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	856	Open in IMG/M
3300027892\|Ga0209550_10561571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → Samistivirus → Streptomyces virus Jay2Jay → Streptomyces phage Jay2Jay	675	Open in IMG/M
3300031758\|Ga0315907_10007044	Not Available	11780	Open in IMG/M
3300031758\|Ga0315907_10007531	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11339	Open in IMG/M
3300031857\|Ga0315909_10857459	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	566	Open in IMG/M
3300032116\|Ga0315903_11236987	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M
3300033816\|Ga0334980_0148358	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	960	Open in IMG/M
3300033978\|Ga0334977_0132564	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1305	Open in IMG/M
3300034066\|Ga0335019_0185852	All Organisms → Viruses	1351	Open in IMG/M
3300034101\|Ga0335027_0005386	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11251	Open in IMG/M
3300034101\|Ga0335027_0375426	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	931	Open in IMG/M
3300034102\|Ga0335029_0300663	All Organisms → Viruses	1012	Open in IMG/M
3300034280\|Ga0334997_0475917	Not Available	783	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.04%
Terrestrial	Environmental → Terrestrial	6.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	70.43%
Marine	Environmental → Aquatic → Marine	22.61%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	6.96%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	33.04%
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.57%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.48%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.61%
River	Environmental → Aquatic → Freshwater → River	0.87%
Creek	Environmental → Aquatic → Freshwater → Creek	0.87%
Coastal	Environmental → Aquatic → Marine → Coastal	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	33.04%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	24.35%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	14.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	6.96%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.22%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	20.87%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	15.65%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	14.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.70%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	6.96%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.22%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.35%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	3.48%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.48%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	2.61%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.61%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.74%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.87%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002161	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007551	Estuarine microbial communities from the Columbia River estuary - metaG 1549B-3	Environmental	Open in IMG/M
3300007560	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007692	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020487	Freshwater microbial communities from Lake Mendota, WI - 13AUG2008 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020541	Freshwater microbial communities from Lake Mendota, WI - 26AUG2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020546	Freshwater microbial communities from Lake Mendota, WI - 03OCT2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027127	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8h	Environmental	Open in IMG/M
3300027197	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743 (SPAdes)	Environmental	Open in IMG/M
3300027224	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02 (SPAdes)	Environmental	Open in IMG/M
3300027247	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02 (SPAdes)	Environmental	Open in IMG/M
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24766J26685_101443611	3300002161	Freshwater And Sediment	DLNEFLNKKSEEKPYELEHLNGVRACSKCDEDVSGAYWDPVELVMSWRCSKAHETTFRVN
B570J40625_10008483210	3300002835	Freshwater	MPNLNEFLNESKEDIKHYELENLPGVRACSKCDEDVSGAKWDPIDLVMSWRCSKGHETIFKVQ*
B570J40625_1014634342	3300002835	Freshwater	FVRRLMPNLDEFLNKDIKQKEYELERIPGLKACAKCDEDVNGATWDPIELVMSWTCSKGHNTIFKVN*
JGI25922J50271_1000000427	3300003413	Freshwater Lake	MPNLNEFFNKKIEQKEYELERLPGLRACNTCDEDVNGASWDPIELVMSWRCSKGHETVFKVQ*
JGI25921J50272_100214012	3300003430	Freshwater Lake	VPDLNEFLKNQPKIEQQDYELEYLNGVRACKTCDRDVSGAYWDPIELVMSWKCSEGHDTTFKVQ*
Ga0065166_104348201	3300004112	Freshwater Lake	VPNLDEFLNKNIEQKEYELEKLNGLRACSKCDEDVNGATWDPIELVMSWKCSKGHETIFKVQ*
Ga0066182_100470382	3300004125	Freshwater Lake	MPNLNEFLNKKDKQKEYSLERLPGLRACNTCDEDVNGALWDPIELVMSWRCSKGHETTFKVQ*
Ga0070374_102871503	3300005517	Freshwater Lake	NLNEFLNKKDKQKEYSLERLPGLRACNTCDEDVNGALWDPIELVMSWRCSKGHETTFKVQ
Ga0068876_106678082	3300005527	Freshwater Lake	MPSLDDFLKENKEDIKHYDLEDLPGVRACSKCDEDVNGAKWDPIDLVMSWRCSKGHETIFKVQ*
Ga0078894_1000918212	3300005662	Freshwater Lake	VPNLNEFLNNKQENSKPYELEQLSGIRACIKCDEDVSGALWDPIELVMSWRCSKGHETTFKVG*
Ga0078894_103719232	3300005662	Freshwater Lake	MPNLNEFLNQKIDQKEYELEKLPGVRACNTCDEDVNGATWDPIDLVMSWRCSKGHETIFKVK*
Ga0078894_105882222	3300005662	Freshwater Lake	MPNLNEFLNKKIEQKEYNLERLPGIRACNACDEDVNGATWDPIELVMSWRCSKNHETIFKVQ*
Ga0078894_106137912	3300005662	Freshwater Lake	MPNLDEFLNKDIKQKEYELERIPGLKACATCDEDVNGATWDPIELVMSWTCSKGHNTIFKVN*
Ga0078894_106224632	3300005662	Freshwater Lake	MPNLDEFLNKDIKQKEYELERIPGLKACAKCDEDVNGATWDPIELVMSWTCSKGHNTIFKVN*
Ga0078894_106474822	3300005662	Freshwater Lake	VPDLNEFLNSQPKIEQQDYELEYLNGVRACKTCDRDVAGAYWDPIELVMSWKCSEGHDTTFKVQ*
Ga0078894_106986832	3300005662	Freshwater Lake	MPNLNEFLNKKIDQKEYDLERLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETVFKVQ*
Ga0078894_107025822	3300005662	Freshwater Lake	MPNLDEFLNKKIDQKEYNLEKLPGLRACNTCDEDVNGATWDPVELVMSWRCSKGHETIFKVQ*
Ga0078894_107185341	3300005662	Freshwater Lake	MPNLNEFLNKKIEQKEYSLEKLPGLRACNTCDEDVNGAMWDPIELVMSWRCSKGHETTFKVQ*
Ga0078894_108488972	3300005662	Freshwater Lake	MPNLNEFFNQKIDQKEYDLEKIPGLRACDKCDENVNGATWDPIELVMSWRCSKGHETVFKVK*
Ga0078894_108837112	3300005662	Freshwater Lake	MPNLNEFLNKKIEQKEYDLEKLPGLRACNTCDEDVNGADWDPIELVMSWRCSKGHETIFKVQ*
Ga0070743_1000210810	3300005941	Estuarine	MPNLDEFLNKKIEQKEYQLERLPGLRACNTCDEDVSGALWDPIELVMSWKCSKGHETIFKIQ*
Ga0070744_100440482	3300006484	Estuarine	MPNLDEFLNKNIQQKEYELERIPGMKACGTCDEDVNGATWDPVELVMSWTCSKGHDTIFKVN*
Ga0102875_10708412	3300007547	Estuarine	MPNLNEFFDKKIEQKEYSLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ*
Ga0102881_10217051	3300007551	Estuarine	MPNLNEFLNKKIEQKEYNLENLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ*
Ga0102913_13120552	3300007560	Estuarine	MPNLNEFFDKKIEQKEYSLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGH*
Ga0102916_10526123	3300007585	Estuarine	MPNLNEFLNKKIEQKEYELERLPGLRACNTCDEDVNGATWDPIELVMCWRCSKGHETIFKVQ*
Ga0102919_10702564	3300007597	Estuarine	MPNLDEFLKPKPELKEYNLEKLSGLRACSTCDEDVNGAFWDPIELVMSWRCSNGHETIFKVQ*
Ga0102921_12962451	3300007603	Estuarine	MPNLNEFLNKKIEQKEYQLERLPGLRACNTCDEDVSGALWDPIELVMSWKCSKGHETIFKIQ*
Ga0102878_10174391	3300007624	Estuarine	NEFFDKKIEQKEYSLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ*
Ga0102878_10487101	3300007624	Estuarine	MPNLDEFLNKKIDQKEYNLEKLPGLRACNTCDEDVSGALWDPIELVMSWKCSKGHETIFKIQ
Ga0102870_11234461	3300007625	Estuarine	MPNLDEFLNKKIEQKEYQLERLPGLRACNTCYEDVSGALWDPIELVMSWKCS*
Ga0102823_10129175	3300007692	Estuarine	MPNLDEFLNKKIEQKEYQLERLPGLRACNTCDEDVSGALWDPIELVMSWKCSKGHETIFKVQ*
Ga0102893_10223006	3300008052	Estuarine	EQKEYSLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ*
Ga0114340_100068053	3300008107	Freshwater, Plankton	MPDLNEFLNKKSEEKPYELEHLNGVRACSKCDEDVSGAYWDPVELVMSWRCSKAHETTFRVN*
Ga0114340_100278818	3300008107	Freshwater, Plankton	MPNLNEFLNSKIKEESKGYELEKLTGVRACSKCDEDVSGAFWDPIELVMSWRCSKNHETIFRIQ*
Ga0114340_10034212	3300008107	Freshwater, Plankton	MPNLNEFLNKKIEQKEYELERLPGLRACNTCDEDVNGASWDPIELVMSWRCSKGHETVFKVQ*
Ga0114340_100547416	3300008107	Freshwater, Plankton	VPNLNEFFNKDIEQKDYSLEKLPGLRACNKCDEDVNGATWDPIELVMSWRCSKGHETVFKVQ*
Ga0114340_10065026	3300008107	Freshwater, Plankton	MPNLDEFLNPKIEEKEYNLEVLQGIRACKTCDEDVSGAYWDPVDLVMSWRCSKGHETIFKVQ*
Ga0114340_10453092	3300008107	Freshwater, Plankton	MPNLNEFLNAKIKEESKGYELEHLNGVRGCAKCDENVSGASWDPIELVMSWKCSKEHVTTFKVQ*
Ga0114340_10884343	3300008107	Freshwater, Plankton	VPDLDEFLNKKIKQKEYDLEKLNGIRACNKCDEDVNGATWDPIELVMSWKCSKGHETIFKVQ*
Ga0114340_11344042	3300008107	Freshwater, Plankton	MPNLDEFLKPQIEHKEYNLEKLPGLRACNTCDEDVNGALWDPIELVMSWRCSKGHETVFKVQ*
Ga0114340_11519173	3300008107	Freshwater, Plankton	LNQKIDQKEYELEKLPGVRACNTCDEDVNGATWDPIDLVMSWRCFKGHETIFKVK*
Ga0114340_12476561	3300008107	Freshwater, Plankton	MPNLNEFLNKKPEKFKPYELEKLSGVRACIKCDEDVNGALWDPVELVMSWRCSKGHETTFKVG*
Ga0114340_12553701	3300008107	Freshwater, Plankton	MPDLNEFLNKKIEQKEYELEKLPGLRACKTCDEDVNGAMWDPIDLVMSWRCSKGHETVFKVQ*
Ga0114343_100378121	3300008110	Freshwater, Plankton	MPNLNEFLNSKIKEESKGYELETLTGVRACSKCDEDVSGAFWDPIELVMSWRCSKNHETIFRIQ*
Ga0114343_11206575	3300008110	Freshwater, Plankton	MPNLNEFLNKEIKQKDYELENLPGVRACNTCDEDVNGAAWDPIELVMSWRCSKGHETVFKVQ*
Ga0114343_11471772	3300008110	Freshwater, Plankton	MPNLNEFLNKEIKQKDYDLENLPGVRACNTCDEDVSGATWDPIDLVMSWRCSKGHETVFKVQ*
Ga0114346_11825975	3300008113	Freshwater, Plankton	PNLNEFLNKEIKQKDYELENLPGVRACNTCDEDVNGAAWDPIELVMSWRCSKGHETVFKVQ*
Ga0114350_100035959	3300008116	Freshwater, Plankton	MPNLDEFLNPKIEEKEYNIEVLQGIRACKTCDEDVSGAYWDPVDLVMSWRCSKGHETIFKVQ*
Ga0114355_12263202	3300008120	Freshwater, Plankton	IFVPNLDEFLNKNIEQKKYELEKLNGIRACSRCDEDVNGATWDPIELVMSWKCSKGHETIFKVQ*
Ga0114336_10486371	3300008261	Freshwater, Plankton	PKIEQQDYELEYLNGVRACKTCDRDVSGAYWDPIELVMSWKCSEGHDTTFKVQ*
Ga0104242_10053838	3300008962	Freshwater	MPNLNEFLTPKIQQKEYNLEALPGVRACNTCDEDVSGALWDPIDLVMSWRCSKGHETIFKVQ*
Ga0104242_10510332	3300008962	Freshwater	MPSLNEFFDKKIEQKEYNLESIPGIRACNKCDEDVSGATWDPIELVMSWKCSRGHETIFKVQ*
Ga0104242_10523813	3300008962	Freshwater	MPNLNEFLNKKIEQKEYSLEKLPGLRACNTCDEDVNGAVWDPIELVMSWRCSKGHETIFKVQ*
Ga0102830_10344432	3300009059	Estuarine	MPNLDEFLNKKIDQKEYNLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ*
Ga0114977_106144691	3300009158	Freshwater Lake	VPNLNEFLNNKQENSKPYELEQLSGIRACIKCDEDVSGAFWDPIELLMSWRCSKGHETTFKVG*
Ga0114983_10698402	3300009194	Deep Subsurface	MPNLDEFLNEDKEEIKHYDLEDLPGVRACSKCDEDVSGAKGDPIDLVMSWRCSKGHETIFKVQ*
Ga0114982_10086822	3300009419	Deep Subsurface	MPNLDEFLNEDKEEIKHYDLEDLPGVRACSKCDEDVSGAKWDPIDLVMSWRCSKGHETIFKVQ*
Ga0114982_10211502	3300009419	Deep Subsurface	MPNLNEFLNKKIEQKEYNLERLPGIRACNTCDEDVNGATWDPIELVMSWRCSKNHETIFKVQ*
Ga0114982_10575834	3300009419	Deep Subsurface	MPNLNEFLNTKIKEESKGYELEQLSGVRACSKCDEDVRGALWDPIELVMSWKCSKDHTTTFRVQ*
Ga0129333_1000006333	3300010354	Freshwater To Marine Saline Gradient	MPDLSEFLNNNNPKDYDLEDLPGIRACLKCDEDVNGAKWDPVELLMYWKCSKGHETIHRMS*
Ga0157203_100112813	3300012663	Freshwater	MPDLNEFLKPKIEIKDNNLEKLEGIRACNKCDEDVSGALWDPIDLVMSWKCSKGHETLFRVN*
Ga0157210_10023961	3300012665	Freshwater	MPDLNEFLNPKIESKDYNLEKLEGLRACSKCDEDVSGALWDPIDLVMSWRCSKGHETIYKVN*
Ga0157210_10074832	3300012665	Freshwater	MPDLNEFLNPKIESKDYNLEKIEGLRACNKCDEDVSGALWDPIDLVMSWRCSKGHETIYKVN*
Ga0164293_1000016848	3300013004	Freshwater	MPNLNEFLNKEIKQKDYELENLPGVRACNTCDEDVNGAAWDPIELVMSWRCSRGHETVFKVQ*
Ga0164293_102498242	3300013004	Freshwater	MPNLNEFLNENKKDIKHYELENLPGVRACSKCDEDVNGAKWDPIDLVMSWRCSKGHETIFKVQ*
Ga0164293_102569803	3300013004	Freshwater	MPNLDEFLNKNIQQKEYELEPIPGMKACGTCDEDVNGATWDPIELVMSWTCSKGHNTIFKVN*
Ga0211732_12237793	3300020141	Freshwater	MPDLNEFLKPKIEIKDYNLEKLEGIRACNKCDEDVSGALWDPIDLVMSWKCSQGHETLFKVN
Ga0211734_109457104	3300020159	Freshwater	MPNLNEFLNKNKEDIKHYELENLPGVRACSKCDEDVSGAKWDPIDLVMSWRCSKGHETIFKVQ
Ga0211729_111572149	3300020172	Freshwater	MPNLNEFLSNESKEVKDKPYELETLSGVRACIKCDEDVSGAYWDPIELVMSWRCSKGHETTFKVG
Ga0211731_1105745427	3300020205	Freshwater	MPDLNEFLKPKIEIKEDNLEKLEGIRACNKCDEDVSGALWDPIDLVMSWKCSQGHETLFKVN
Ga0211731_111044101	3300020205	Freshwater	MPDLNEFLKPKIEIKDYNLEKLEGIRACNKCDEDVSGALWDPIDLVMSWKCSQGHETLF
Ga0208200_1014806	3300020487	Freshwater	MPNLNEFLNESKEDIKHYELENLPGVRACSKCDEDVSGAKWDPIDLVMSWRCSKGHETIFKVQ
Ga0208200_1122081	3300020487	Freshwater	MPNINDFLKENKSKDYNLEEIAGVRACSKCDEDVKGAKWDPVDLVMSWRCSKGHNTIFKV
Ga0208359_10399592	3300020541	Freshwater	VPNLNEFLNDKQENSKPYELEQLSGIRACIKCDEDVSGAFWDPIELVMSWRCSKGHETTFKVG
Ga0208853_10559752	3300020546	Freshwater	MPNLNEFLNENKEDIKHYELENLPGVRACSKCDEDVSGAKWDPIDLVMSWRCSKGHETIFKVQ
Ga0213920_10132166	3300021438	Freshwater	MPNLNEFLNKKPEKIKPYDLEKISGVRACIKCDEDVNGALWDPIELVMSWRCSKGHETTFKVN
Ga0222714_101428513	3300021961	Estuarine Water	VPNLDEFLNKNIEQKEYELEKLNGLRACSKCDEDVNGATWDPIELVMSWKCSKGHETIFKVQ
Ga0222714_102471861	3300021961	Estuarine Water	MPNLNEFLNKKIEQKEYNLENLPGLRACNTCDEDVNGATWDPIDLVMSWRCSKGHETIFKVQ
Ga0222712_100009805	3300021963	Estuarine Water	MPNLDEFLKPKPELKEYNLEKLSGLRACSTCDEDVNGAFWDPVELVMSWRCSNGHETIFKVQ
Ga0244777_1000008047	3300024343	Estuarine	MPNLNEFFDKKIEQKEYSLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ
Ga0244777_103089592	3300024343	Estuarine	MPNLDEFLNKKIEQKEYQLERLPGLRACNTCDEDVSGALWDPIELVMSWKCSKGHETIFKIQ
Ga0244775_105763692	3300024346	Estuarine	MPDLNEFLNPKIETKDYNLEKLGGIRACNKCDEDVSGALWDPIELVMSWKCSKGHDTIFKVN
Ga0244775_107380102	3300024346	Estuarine	MPNLDEFLNKKIDQKEYNLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ
Ga0244775_111716042	3300024346	Estuarine	MPNLNEFLNKKIDQKEYNLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ
Ga0255071_10643812	3300027127	Freshwater	MPDLNEFLNPKIEAKEYNLEKLEGLRACNKCDEDVSGALWDPIELVMSWRCSKGHETIFKVQ
Ga0208922_10080395	3300027197	Estuarine	MPNLDEFLNKKIEQKEYQLERLPGLRACNTCDEDVSGALWDPIELVMSWKCSKG
Ga0208164_10285462	3300027224	Estuarine	MPNLDEFLKPKPELKEYNLEKLSGLRACSTCDEDVNGAFWDPIELVMSWRCSNGHETIFKVQ
Ga0208679_10436362	3300027247	Estuarine	MPNLNEFFDKKIEQKEYSLEKLPGLRACNTCDEDVNGATWDPIELVMSWRCSK
Ga0208787_11542832	3300027518	Deep Subsurface	MPNLDEFLNPKIDQKEYDLEKIPGLRACDKCDENVNGATWDPVELVMSWRCSKGHETVFKVK
Ga0209552_11354752	3300027563	Freshwater Lake	MPNLNEFLNKKDKQKEYSLERLPGLRACNTCDEDVNGALWDPIELVMSWRCSKGHETTFRVQ
Ga0209551_10702702	3300027689	Freshwater Lake	MPNLNEFLNKKIEQKEYELERLPGLRACNTCDEDVNGASWDPIELVMSWRCSKGHETVFKVQ
Ga0209599_1000018957	3300027710	Deep Subsurface	MPNLDEFLNEDKEEIKHYDLEDLPGVRACSKCDEDVSGAKWDPIDLVMSWRCSKGHETIFKVQ
Ga0209599_100075715	3300027710	Deep Subsurface	MPNLNEFLNKKIEQKEYNLERLPGIRACNTCDEDVNGATWDPIELVMSWRCSKNHETIFKVQ
Ga0209599_100180945	3300027710	Deep Subsurface	MPNLNEFLNTKIKEESKGYELEQLSGVRACSKCDEDVRGALWDPIELVMSWKCSKDHTTTFRVQ
Ga0209296_10027052	3300027759	Freshwater Lake	VPNLNEFLNNKQENSKPYELEQLSGIRACIKCDEDVSGAFWDPIELLMSWRCSKGHETTFKVG
Ga0209770_1000002529	3300027769	Freshwater Lake	MPNLNEFFNKKIEQKEYELERLPGLRACNTCDEDVNGASWDPIELVMSWRCSKGHETVFKVQ
Ga0209770_102433972	3300027769	Freshwater Lake	MPNLNEFLNKKIEQKEYDLEKLPGLRACNTCDEDVNGADWDPIELVMSWRCSKGHETIFKVQ
Ga0209229_101237412	3300027805	Freshwater And Sediment	MPNLNEFFDKKPEEVKEKPYELEYLNGVRACSKCDEDVTGAYWDPIELFMSWKCSKGHDTVFRVV
Ga0209229_101360033	3300027805	Freshwater And Sediment	VPNLNEFLNNGIDQKDYNLEKLPGLRACNKCDEDVNGATWDPIELVMSWRCSKGHETIFKVQ
Ga0209229_102903482	3300027805	Freshwater And Sediment	MPDLNEFLNKKSEEKPYELEYLNGVRACSKCDEDVSGAHWDPVELVMSWRCSKAHETTFRVN
Ga0209990_103178771	3300027816	Freshwater Lake	MPSLDDFLKENKEDIKHYDLEDLPGVRACSKCDEDVNGAKWDPIDLVMSWRCSKGHETIF
Ga0209550_103958883	3300027892	Freshwater Lake	NKKIEQKEYELERLPGLRACNTCDEDVNGASWDPIELVMSWRCSKGHETVFKVQ
Ga0209550_105615713	3300027892	Freshwater Lake	LNEFLNKKDKQKEYSLERLPGLRACNTCDEDVNGALWDPIELVMSWRCSKGHETTFKVQ
Ga0315907_1000704422	3300031758	Freshwater	MPSLDDFLKENKEDIKHYDLEDLPGVRACSKCDEDVNGAKWDPIDLVMSWRCSKGHETIFKVQ
Ga0315907_1000753122	3300031758	Freshwater	MPNLDEFLNPKIEEKEYNIEVLQGIRACKTCDEDVSGAYWDPVDLVMSWRCSKGHETIFKVQ
Ga0315909_108574592	3300031857	Freshwater	VPDLDEFLNKKIKQKEYDLEKLNGIRACNKCDEDVNGATWDPIELVMSWKCSKGHETIFKVQ
Ga0315903_112369871	3300032116	Freshwater	YQNYRRIFVPNLDEFLNKNIEQKEYELEKLNGLRACSKCDEDVNGATWDPIELVMSWKCSKGHETIFKVQ
Ga0334980_0148358_319_507	3300033816	Freshwater	MPDLNEFLNEKIDQKEYDLEKLPGVRACNTCDEDVNGATWDPIELVMSWKCSRGHETMFKVR
Ga0334977_0132564_533_721	3300033978	Freshwater	MPNLNEFLNKEIKQKDYELENLPGVRACNTCDEDVNGAAWDPIELVMSWRCSRGHETVFKVQ
Ga0335019_0185852_259_450	3300034066	Freshwater	MPNLNEFLNESKENIKHYELENLPGVRACSKCDEDVSGAKWDPIDLVMSWRCSKGHETIFKVQ
Ga0335027_0005386_1765_1959	3300034101	Freshwater	MPNLNEFLNSKIKEEPKGYELEKLAGVRACSKCDEDVSGASWDPIKLVMSWICSKNHETVFRIQ
Ga0335027_0375426_679_870	3300034101	Freshwater	MPNLNEFLNENKKDIKHYELENLPGVRACSKCDEDVNGAKWDPIDLVMSWRCSKGHETIFKVQ
Ga0335029_0300663_397_585	3300034102	Freshwater	MPNLDEFLNKDIKQKEYELERIPGLKACATCDEDVNGATWDPIELVMSWTCSKGHNTIFKVN
Ga0334997_0475917_541_732	3300034280	Freshwater	VPNLNEFLNNKQENSKPYELEQLSGIRACIKCDEDVSGAFWDPVELVMSWRCSKGHETTFKVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences