Metagenome / Metatranscriptome Family F080026

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080026
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	97 residues
Representative Sequence	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLE
Number of Associated Samples	79
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.52 %
% of genes near scaffold ends (potentially truncated)	31.30 %
% of genes from short scaffolds (< 2000 bps)	68.70 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.870 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (31.304 % of family members)
Environment Ontology (ENVO)	Unclassified (55.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (70.435 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.39% β-sheet: 1.61% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01464	SLT	8.70
PF02867	Ribonuc_red_lgC	5.22
PF13640	2OG-FeII_Oxy_3	2.61
PF00535	Glycos_transf_2	0.87
PF06067	DUF932	0.87
PF02467	Whib	0.87
PF00296	Bac_luciferase	0.87
PF00534	Glycos_transf_1	0.87
PF13385	Laminin_G_3	0.87
PF04586	Peptidase_S78	0.87
PF11397	GlcNAc	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	5.22
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.87
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
All Organisms	root	All Organisms	39.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Viruses	superkingdom	All Organisms → Viruses	38.26 %
cellular organisms	root	All Organisms → cellular organisms	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	38.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	38.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	38.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	38.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	33.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000736\|JGI12547J11936_1001223	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7251	Open in IMG/M
3300000929\|NpDRAFT_10155090	Not Available	520	Open in IMG/M
3300000929\|NpDRAFT_10318499	Not Available	515	Open in IMG/M
3300002835\|B570J40625_100000179	Not Available	98877	Open in IMG/M
3300003413\|JGI25922J50271_10000126	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21559	Open in IMG/M
3300003413\|JGI25922J50271_10056335	Not Available	873	Open in IMG/M
3300003430\|JGI25921J50272_10021893	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1704	Open in IMG/M
3300003430\|JGI25921J50272_10108505	Not Available	586	Open in IMG/M
3300003490\|JGI25926J51410_1055473	Not Available	678	Open in IMG/M
3300003493\|JGI25923J51411_1026331	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1146	Open in IMG/M
3300004096\|Ga0066177_10110297	Not Available	1062	Open in IMG/M
3300004096\|Ga0066177_10368546	Not Available	620	Open in IMG/M
3300004112\|Ga0065166_10285524	Not Available	671	Open in IMG/M
3300004112\|Ga0065166_10346618	Not Available	613	Open in IMG/M
3300004112\|Ga0065166_10383009	Not Available	585	Open in IMG/M
3300004125\|Ga0066182_10078487	Not Available	771	Open in IMG/M
3300005517\|Ga0070374_10106622	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1460	Open in IMG/M
3300005517\|Ga0070374_10189311	Not Available	1061	Open in IMG/M
3300005517\|Ga0070374_10190375	Not Available	1058	Open in IMG/M
3300005662\|Ga0078894_10450680	Not Available	1159	Open in IMG/M
3300005662\|Ga0078894_10544829	Not Available	1038	Open in IMG/M
3300005662\|Ga0078894_10678158	Not Available	911	Open in IMG/M
3300005662\|Ga0078894_10897801	Not Available	769	Open in IMG/M
3300005662\|Ga0078894_10948919	Not Available	743	Open in IMG/M
3300005662\|Ga0078894_11102752	Not Available	677	Open in IMG/M
3300005662\|Ga0078894_11137274	Not Available	665	Open in IMG/M
3300005662\|Ga0078894_11248238	Not Available	627	Open in IMG/M
3300005805\|Ga0079957_1069283	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2046	Open in IMG/M
3300005941\|Ga0070743_10044434	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1519	Open in IMG/M
3300005941\|Ga0070743_10228584	Not Available	607	Open in IMG/M
3300005942\|Ga0070742_10002085	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5183	Open in IMG/M
3300006484\|Ga0070744_10149341	Not Available	670	Open in IMG/M
3300007545\|Ga0102873_1022993	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1919	Open in IMG/M
3300007546\|Ga0102874_1022775	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2049	Open in IMG/M
3300007547\|Ga0102875_1107337	Not Available	889	Open in IMG/M
3300007548\|Ga0102877_1053250	Not Available	1170	Open in IMG/M
3300007590\|Ga0102917_1027042	Not Available	1992	Open in IMG/M
3300007600\|Ga0102920_1069105	Not Available	1112	Open in IMG/M
3300007617\|Ga0102897_1002601	Not Available	5809	Open in IMG/M
3300007621\|Ga0102872_1025567	Not Available	1621	Open in IMG/M
3300007658\|Ga0102898_1018496	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1548	Open in IMG/M
3300007992\|Ga0105748_10267653	Not Available	720	Open in IMG/M
3300008055\|Ga0108970_10363367	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5325	Open in IMG/M
3300008055\|Ga0108970_10552232	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2892	Open in IMG/M
3300008107\|Ga0114340_1020571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5120	Open in IMG/M
3300008107\|Ga0114340_1021029	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5368	Open in IMG/M
3300008107\|Ga0114340_1022525	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4026	Open in IMG/M
3300008107\|Ga0114340_1150720	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1517	Open in IMG/M
3300008110\|Ga0114343_1010968	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4990	Open in IMG/M
3300008110\|Ga0114343_1128812	Not Available	837	Open in IMG/M
3300008261\|Ga0114336_1038274	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2586	Open in IMG/M
3300008261\|Ga0114336_1090042	Not Available	2686	Open in IMG/M
3300008261\|Ga0114336_1108639	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1291	Open in IMG/M
3300008261\|Ga0114336_1224037	Not Available	771	Open in IMG/M
3300008261\|Ga0114336_1323836	Not Available	567	Open in IMG/M
3300008996\|Ga0102831_1067028	Not Available	1198	Open in IMG/M
3300009059\|Ga0102830_1026582	Not Available	1799	Open in IMG/M
3300009079\|Ga0102814_10712458	Not Available	552	Open in IMG/M
3300009155\|Ga0114968_10007961	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7748	Open in IMG/M
3300009183\|Ga0114974_10435504	Not Available	745	Open in IMG/M
3300012000\|Ga0119951_1062062	Not Available	1011	Open in IMG/M
3300012706\|Ga0157627_1213251	Not Available	749	Open in IMG/M
3300012707\|Ga0157623_1000543	Not Available	717	Open in IMG/M
3300012709\|Ga0157608_1117504	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1493	Open in IMG/M
3300012714\|Ga0157601_1088594	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1419	Open in IMG/M
3300013087\|Ga0163212_1146158	Not Available	748	Open in IMG/M
3300020159\|Ga0211734_11071408	Not Available	645	Open in IMG/M
3300020161\|Ga0211726_10418611	Not Available	1173	Open in IMG/M
3300020172\|Ga0211729_10570845	Not Available	840	Open in IMG/M
3300020172\|Ga0211729_10645466	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4919	Open in IMG/M
3300020172\|Ga0211729_11154703	Not Available	675	Open in IMG/M
3300020526\|Ga0208085_1030320	Not Available	709	Open in IMG/M
3300020560\|Ga0208852_1000106	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	21261	Open in IMG/M
3300020574\|Ga0208221_1000023	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	17325	Open in IMG/M
3300021091\|Ga0194133_10076135	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2698	Open in IMG/M
3300021963\|Ga0222712_10488961	Not Available	730	Open in IMG/M
3300022752\|Ga0214917_10000099	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	95645	Open in IMG/M
3300024343\|Ga0244777_10000910	Not Available	22200	Open in IMG/M
3300024343\|Ga0244777_10172436	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1394	Open in IMG/M
3300024346\|Ga0244775_10005316	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13077	Open in IMG/M
3300024346\|Ga0244775_10120649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2222	Open in IMG/M
3300024352\|Ga0255142_1026366	Not Available	923	Open in IMG/M
3300024574\|Ga0255275_1198853	Not Available	532	Open in IMG/M
3300024857\|Ga0256339_1070467	Not Available	731	Open in IMG/M
3300025283\|Ga0208048_1079455	Not Available	720	Open in IMG/M
3300026455\|Ga0255155_1087455	Not Available	505	Open in IMG/M
3300026478\|Ga0255156_1003000	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3607	Open in IMG/M
3300027127\|Ga0255071_1040055	Not Available	690	Open in IMG/M
3300027131\|Ga0255066_1001345	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4396	Open in IMG/M
3300027155\|Ga0255081_1030669	Not Available	1185	Open in IMG/M
3300027156\|Ga0255078_1018565	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1554	Open in IMG/M
3300027188\|Ga0208921_1006547	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1918	Open in IMG/M
3300027218\|Ga0208165_1013198	Not Available	1250	Open in IMG/M
3300027508\|Ga0255072_1105466	Not Available	554	Open in IMG/M
3300027525\|Ga0208437_1031013	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1324	Open in IMG/M
3300027563\|Ga0209552_1018527	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2097	Open in IMG/M
3300027581\|Ga0209651_1147389	Not Available	639	Open in IMG/M
3300027601\|Ga0255079_1007778	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2668	Open in IMG/M
3300027644\|Ga0209356_1223485	Not Available	502	Open in IMG/M
3300027689\|Ga0209551_1020583	All Organisms → cellular organisms → Bacteria → Proteobacteria	2239	Open in IMG/M
3300027710\|Ga0209599_10000195	Not Available	42819	Open in IMG/M
3300027769\|Ga0209770_10012652	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3797	Open in IMG/M
3300027769\|Ga0209770_10371828	Not Available	533	Open in IMG/M
3300027892\|Ga0209550_10042675	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3737	Open in IMG/M
3300027892\|Ga0209550_10063680	Not Available	2905	Open in IMG/M
3300027892\|Ga0209550_10193932	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1394	Open in IMG/M
3300027892\|Ga0209550_10326412	Not Available	976	Open in IMG/M
3300027892\|Ga0209550_10412866	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	832	Open in IMG/M
3300027892\|Ga0209550_10472526	Not Available	759	Open in IMG/M
3300027892\|Ga0209550_10490420	Not Available	740	Open in IMG/M
3300027963\|Ga0209400_1002045	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15592	Open in IMG/M
3300031963\|Ga0315901_10626562	Not Available	811	Open in IMG/M
3300032116\|Ga0315903_10060000	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3814	Open in IMG/M
3300033996\|Ga0334979_0000258	Not Available	41726	Open in IMG/M
3300034061\|Ga0334987_0270837	Not Available	1144	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.26%
Host-Associated	Host-Associated	1.74%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.39%
Plants	Host-Associated → Plants	1.74%
Terrestrial	Environmental → Terrestrial	0.87%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	73.91%
Marine	Environmental → Aquatic → Marine	23.48%
Leaf	Host-Associated → Plants → Leaf	1.74%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.87%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	35.65%
Lake	Environmental → Aquatic → Freshwater → Lake	26.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.78%
River	Environmental → Aquatic → Freshwater → River	9.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.74%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.74%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.74%
Coastal	Environmental → Aquatic → Marine → Coastal	0.87%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	32.17%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	26.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	14.78%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	9.57%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.09%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	31.30%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	14.78%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	9.57%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	9.57%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.22%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	5.22%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.61%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.61%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.74%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	1.74%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.74%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater And Sediment	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.87%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.87%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.87%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.87%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000736	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB epilimnion July 2011	Environmental	Open in IMG/M
3300000929	Marine plume microbial communities from the Columbia River - 15 PSU	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003493	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN	Environmental	Open in IMG/M
3300004096	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004125	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (version 2)	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300005942	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.757	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007658	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012706	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012707	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES154 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012709	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES134 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012714	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES125 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020526	Freshwater microbial communities from Lake Mendota, WI - 21JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020560	Freshwater microbial communities from Lake Mendota, WI - 18JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024352	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0h	Environmental	Open in IMG/M
3300024574	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024857	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025283	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)	Environmental	Open in IMG/M
3300026455	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8h	Environmental	Open in IMG/M
3300026478	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027127	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepC_8h	Environmental	Open in IMG/M
3300027131	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_8h	Environmental	Open in IMG/M
3300027155	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepA_8h	Environmental	Open in IMG/M
3300027156	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepA_8h	Environmental	Open in IMG/M
3300027188	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709 (SPAdes)	Environmental	Open in IMG/M
3300027218	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3 (SPAdes)	Environmental	Open in IMG/M
3300027508	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027525	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027581	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)	Environmental	Open in IMG/M
3300027601	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepB_8h	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12547J11936_10012236	3300000736	Freshwater And Sediment	MSYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQKAHARCVDLMFLLGEITNLPEYLTYLGNNPETKQDPYGWIVAYPEAEKIVEKTVDLENNV*
NpDRAFT_101550901	3300000929	Freshwater And Marine	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTSHNPAHQRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEAIVEKTDEKAVDL
NpDRAFT_103184991	3300000929	Freshwater And Marine	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEEKKVDPYGWILAYP
B570J40625_10000017990	3300002835	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLENNV*
JGI25922J50271_1000012627	3300003413	Freshwater Lake	MKLMAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYRCHTPTQKPHQRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVQGELNNDTKVVDLE*
JGI25922J50271_100563351	3300003413	Freshwater Lake	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTHQKAHARCVDLMFLLGEITNLPEYLTYLGNNPETKQDPYGWIVAYPEAEKIIEKTVDLENNV*
JGI25921J50272_100218931	3300003430	Freshwater Lake	MAYSQEQMDLAHKIVFRLMEILKVCPNVDDKYKCHTTHMVSHKRCVDLMVLLAEITNLPEYLVFLGNNPETQKDPFGWIVAYPPAGEISEKVVDLE*
JGI25921J50272_101085052	3300003430	Freshwater Lake	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDLMVLLAEITNLPEYLVYLGNNDETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE*
JGI25926J51410_10554733	3300003490	Freshwater Lake	MAYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTTHQKAHQRCVDLMVLLAEITNLPEYLEYLGNNSETNQDPYGFIVSYPAAESIVKH
JGI25923J51411_10263315	3300003493	Freshwater Lake	MEFAHKVVFRLIEILKVCPNVDEKSKCHTVHMHTHKRCLDLMVLLAEITNLPEYLEYLGNNPETNKDPYGFIVAYPPAEEIIEKTVDLE
Ga0066177_101102971	3300004096	Freshwater Lake	MTYSQEQMEMAHKIVFRLMEILKVCPHVDEKYRCHTTHQKAHQRCVDLMVLLAEITNLPEYITFLQNNPETKTDPFGWIVEYPPAETIIEKVVDLEEGYDYNKDV*
Ga0066177_103685461	3300004096	Freshwater Lake	MTYSQEQMDFAHKVVFRLMEILKVCPNVDDTYKCHTAHQKAHARCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPAAEKIVEKTVDLENNV*
Ga0065166_102855241	3300004112	Freshwater Lake	MAYSQEQMDFAHKIVFRLMEILKVCPNVDEKYRCHTTNQKPHARCIDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALNNSEKAVDLE*
Ga0065166_103466182	3300004112	Freshwater Lake	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTSHKPAHQRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEAIVEKTDEKAVDLE*
Ga0065166_103830092	3300004112	Freshwater Lake	MAYSQEQMEFAHKVVFRLMEILKVCPNVDEKYKCHTAHQASHTRCVHLMFLLAEITNLPEYLEYLGNNNETSSDPYGWITSYPASDEIYQSTENKDEKQLT*
Ga0066182_100784873	3300004125	Freshwater Lake	MEFAHKVVFRLIEILKVCPNVDEKSKCHTVHMHTHKRCLDLMVLLAEITNLPEYLEYLGNNPETNKDPYGFIVAYPPAKEIIEKTVD
Ga0070374_101066225	3300005517	Freshwater Lake	MRLVVYSQEQMEFAHKVVFRLIEILKVCPNVDEKSKCHTVHMHTHKRCLDLMVLLAEITNLPEYLEYLGNNPETNKDPYGFIVAYPPAKEIIEKTVDLE*
Ga0070374_101893112	3300005517	Freshwater Lake	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYRCHTPTQKPHQRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVQGELNNDTKVVDLE*
Ga0070374_101903754	3300005517	Freshwater Lake	MAYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTTHQKAHQRCVDLMVLLAEITNLPEYLEYLGNNSETNQDPYGFIVSYPAAESIVKHEIDKNEELIDIHGKVVDLE*
Ga0078894_104506801	3300005662	Freshwater Lake	MAYSKDQMEFAHKVVFRLMEILKVCPNVDEKYKCHTSHLPAHKRCVDLMVLLAEITNLPEYLEYLGNNPETNQDPYGWIVAYPPAAEIVEKTVDLEEEDSYNETV*
Ga0078894_105448292	3300005662	Freshwater Lake	MAYSQEQMEFAHKVVFRLMEILKVCPNVDEKYKCNTPDRAPHKRCIDIMVLLAEITNLPEYLEYLGNNPETTQDPYGWIVAYPPAGEIVEKVVDLE*
Ga0078894_106781582	3300005662	Freshwater Lake	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTINQKAHARCVDLMVLLAEITNLPEYLVYLGNNPETNVDPYGWITEYPAAEKIVEKTVDLENNV*
Ga0078894_108978011	3300005662	Freshwater Lake	MTYSQEQMELAHKIVFRLMEILKVCPHVDEKYRCNTTHQKAHQRCVDLMVLLAEITNLPEYLVYLGNNSETKTDPYGWIVEYPSAEEIIEKTVDLEEEDDYNKNV*
Ga0078894_109489192	3300005662	Freshwater Lake	MAYSQDQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQAAHKRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEAINEKAVDLE*
Ga0078894_111027523	3300005662	Freshwater Lake	MAYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTPNREPHKRCVDLMVLLAEITNLPEYLEYLGNNPETNQDPYGWIISYPPAKEIVEKAVDLE*
Ga0078894_111372741	3300005662	Freshwater Lake	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTSHQKAHARCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWIVAYPPAEKIVEKTVDLENNV*
Ga0078894_112482382	3300005662	Freshwater Lake	MAYSQEQMEFAHKVVFRLMEILKVCPNVDEKYKCHTVNRAPHKRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEEIVQK*
Ga0079957_10692836	3300005805	Lake	MAYSQDQMEFAHMVVFRLKEILEVCPNVDEKSTCWTVHEKAHQRCYDLMVLLAEITNLPEYLEFLGNHPETKVNPYGFITALPPAKRFKEDPETDIDFVQDIVDLEQ*
Ga0070743_100444341	3300005941	Estuarine	MDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALSNNEKVVDLE*
Ga0070743_102285841	3300005941	Estuarine	IYSRGKGIMSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTNQKAHARCVDLMVLLAEITNLPEYLVYLGNNPDTNADPYGWITEYPAAEKIVEKTVDLENNV*
Ga0070742_100020854	3300005942	Estuarine	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALSNNEKVVDLE*
Ga0070744_101493411	3300006484	Estuarine	LKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALSNNEKVVDLE*
Ga0102873_10229931	3300007545	Estuarine	MEFAHKVVFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDIIAKTVDLE*
Ga0102874_10227756	3300007546	Estuarine	MAYSQDQMEFAHKVVFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDIIAKTVDLE*
Ga0102875_11073371	3300007547	Estuarine	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAI
Ga0102877_10532501	3300007548	Estuarine	QEQMDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALSNNEKVVDLE*
Ga0102917_10270427	3300007590	Estuarine	AYSQDQMEFAHKVVFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDIIAKTVDLE*
Ga0102920_10691053	3300007600	Estuarine	VFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDIIAKTVDLE*
Ga0102897_10026011	3300007617	Estuarine	RMRLMAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDIIAKTVDLE*
Ga0102872_10255671	3300007621	Estuarine	EILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALSNNEKVVDLE*
Ga0102898_10184965	3300007658	Estuarine	MAYSQDQMEFAHKVVFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDII
Ga0105748_102676534	3300007992	Estuary Water	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPS
Ga0108970_103633672	3300008055	Estuary	MAYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDLMVLLAEITNLPEYLVYLGNNDETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE*
Ga0108970_105522325	3300008055	Estuary	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTNQKAHARCVDLMVLLAEITNLPEYLVYLGNNPDTNADPYGWITEYPAAEKIVEKTVDLENNV*
Ga0114340_10205713	3300008107	Freshwater, Plankton	MAYSQEQMDFAHKVVVRLMEILKVCPNVDNKYRCNTTHQKVHQRCIDLMVLLAEITNLPEYLQYLGNNPETKSDPYGFILAYPPAESIVKHEIDREEELLDLHGKVVDLE*
Ga0114340_10210297	3300008107	Freshwater, Plankton	MAYSQDQMEFAHMVAFRLKEILEVCPNVDEKSTCWTVHEKAHQRCYDLMVLLAEITNLPEYLEFLGNHPETKVNPYGFITALPPAKRFKEDPETDIDFVQDIVDLEQ*
Ga0114340_10225259	3300008107	Freshwater, Plankton	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTSHQKAHARCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWIVSYPPAEKIVEKTVDLENNV*
Ga0114340_11507203	3300008107	Freshwater, Plankton	MEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQAAHKRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEAINEKAVDLE*
Ga0114343_101096814	3300008110	Freshwater, Plankton	MDFAHKVVVRLMEILKVCPNVDDKYRCHTPTQKPHQRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVQGE*
Ga0114343_11288121	3300008110	Freshwater, Plankton	YSQEQMDFAHKVVFRLMEILKVCPNVDDTYKCHTAHQKAHARCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPAAEKIVKKTVDLENNV*
Ga0114336_10382745	3300008261	Freshwater, Plankton	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQAAHKRCVDLMVLLAEITNLPEYLVYLGNNSETQQDPFGWIVAYPPAENITEKAVDLE*
Ga0114336_10900426	3300008261	Freshwater, Plankton	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHARCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLENNV*
Ga0114336_11086395	3300008261	Freshwater, Plankton	MSYSQEQMEFAHKVVFRLMEILKVCPNVDDKYKCHTTHQKAHARCVDLMVLLAEITNLPEYLIYLGNNPETKQDPYGWITAYPEAEKIVEKVVDLENNV*
Ga0114336_12240371	3300008261	Freshwater, Plankton	MAYSQEQMDFAHKIVFRLMEILKVCPNVDEKYRCHTTNQKPHARCIDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALKNSEKAVDLE*
Ga0114336_13238362	3300008261	Freshwater, Plankton	MKLMTYSQEQMEMAHKIVFRLMEILKVCPHVDEKYRCHTTHQKAHQRCVDLMVLLAEITNLPEYITFLQNNPETKTDPFGWIVEYPPAETIIEKVVDLEKGYDYNKDV*
Ga0102831_10670283	3300008996	Estuarine	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTSHKPAHQRCVDLMFLLAEITNLPEYLEYLGNNPETSQDPYGWIIAYPPAEAIVEKTDEKAVDLE*
Ga0102830_10265821	3300009059	Estuarine	MEFAHKIVFRIMEILKVCPNVDDKYKCHTSHKPAHQRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEAIVEKTDEKAVDLE*
Ga0102814_107124581	3300009079	Estuarine	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTSHKPAHQSCVDLMFLLAEITNLPEYLEYLGNNPDTNQDPYGWIIAYPPAEAIVEKTDEKAVDLE*
Ga0114968_100079617	3300009155	Freshwater Lake	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDIMVLLAEITNLPEYLVYLANNNETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE*
Ga0114974_104355042	3300009183	Freshwater Lake	MSYSQEQMDFAHKVVFRLMEILKVCPNVDNKYKCHTSHLDSHKRCVDLMVLLAEITNLPEYLVYLGNNPETNQDPYGWIIEYPNAEDIVEKTVDLE*
Ga0119951_10620621	3300012000	Freshwater	MEFAHKIVFRLMEILKICPNVDDRYKCHTTHQSAHKRCVDLMFLLAEITNLPEYLTYLGNNPETNQDPYGWIIAYPPAENIVEKTVDLE*
Ga0157627_12132511	3300012706	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKT
Ga0157623_10005434	3300012707	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEK
Ga0157608_11175045	3300012709	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLSEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLENNV*
Ga0157601_10885945	3300012714	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLE
Ga0163212_11461581	3300013087	Freshwater	MQYSQEQMEFAHLVVFRLKEILQQCPSVDPDICACLTVHQKSHARCYTLMVLLAEITNLPEYLTYLGNHPDTKTNPYGFITQFPPAREIVRETVDLENEV*
Ga0211734_110714082	3300020159	Freshwater	MSYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTSHQKAHARCVDLMVLLAEITNLPEYLVYLGNNPETSKDPYGWILAYPPSEKIVEEMVDIENNV
Ga0211726_104186111	3300020161	Freshwater	MAYSQEQMDFAHKIVFRLMEILKVCPNVDEKYKCHTTNQKPHARCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALNNSEKAVDLE
Ga0211729_105708451	3300020172	Freshwater	MAYSQEQMEIAHKIVFRLMEILKVCPNVDEKYKCHTTHMFTHKRCVDLMVLLAEITNLPEYLEYLGNNPDTSKDPYGFIVSYPPAEAIVESVSKNDEKVV
Ga0211729_106454664	3300020172	Freshwater	MSYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTSHQKAHTRCVDLMVLLAEITNLPEYLVYLGNNPETNQDPYGWILAYPPSEKILEEMVDIENNV
Ga0211729_111547032	3300020172	Freshwater	MSFSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTHQKPHKRCVDLMVLLAEITNLTEYLEYLGNNPETNKDPYGFIVSYPPAEAIVNHEIDKSEELIDIYGKVVDLE
Ga0208085_10303204	3300020526	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWIT
Ga0208852_100010651	3300020560	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLENNV
Ga0208221_10000231	3300020574	Freshwater	QEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLENNV
Ga0194133_100761358	3300021091	Freshwater Lake	MQYSQEQMEFAHLVVFRLKEILQQCPSVDPAICACLTVHQKSHARCFSLMVLLAEITNLPEYLTYLGNHPDTKTNPYGFITQFPPAREIVKETVDLENEV
Ga0222712_104889612	3300021963	Estuarine Water	VSYSPEQMEMAHKIVFRLMEILKVCPNVDERYKCHTAHQKSHVRCMDLMVLLAEITNLPEYLIYLGNNPQTSQDPYGWITEYPDAEDIVEKTVDLE
Ga0214917_10000099137	3300022752	Freshwater	MAYTQDQMEFAHMVVFRLKEILKVCPNVDDNYSCMTISQKAHQRCYDLMVLLAEITNLPEYLQYLGNHPDTKTNPYGYITQLPPARKIVEETVDLENEV
Ga0244777_1000091031	3300024343	Estuarine	MAYSQDQMEFAHKVVFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDIIAKTVDLE
Ga0244777_101724361	3300024343	Estuarine	MDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALSNNEKVVDLE
Ga0244775_100053168	3300024346	Estuarine	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALSNNEKVVDLE
Ga0244775_101206491	3300024346	Estuarine	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTSHKPAHQRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEAIVEKTDEKAVDLE
Ga0255142_10263661	3300024352	Freshwater	MTYTQEQMEFAHLVVFRLKEILLECPNVDEKKLSCMTVNQKAHTRCYSLMVLLAEITNLPEYLTFLGNHPETKTDPYGWITSYPPA
Ga0255275_11988532	3300024574	Freshwater	MTYTQEQMEFAHLVVFRLKEILLECPNVDEKKLSCMTVNQKAHTRCYSLMVLLAEITNLPEYLTFLGNHPETKTDPYGWITSYPPAQKIVDE
Ga0256339_10704674	3300024857	Freshwater	MTYTQEQMEFAHLVVFRLKEILLECPNVDEKKLSCMTVNQKAHTRCYSLMVLLAEITNLPEYLTFLGNHPETKTDPYGWITSYP
Ga0208048_10794551	3300025283	Freshwater	MQYSQEQMEFAHLVVFRLKEILQQCPSVDPDICACLTVHQKSHARCYTLMVLLAEITNLPEYLTYLGNHPDTKTNPYGFITQFPPAREIVRETVDLENEV
Ga0255155_10874552	3300026455	Freshwater	MTYTQEQMEFAHLVVFRLKEILLECPNVDEKKLSCMTVNQKAHTRCYSLMVLLAEITNLPEYLTFLGNHPETKTDPYGWITSYPP
Ga0255156_10030001	3300026478	Freshwater	MTYTQEQMEFAHLVVFRLKEILLECPNVDEKKLSCMTVNQKAHTRCYSLMVLLAEITNLPEYLTFLGNHPETKTDPYGWITSYPPAQKIVDEDVDLENEI
Ga0255071_10400552	3300027127	Freshwater	MDFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDLMVLLAEITNLPEYLVYLGNNDETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE
Ga0255066_10013456	3300027131	Freshwater	MAYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDLMVLLAEITNLPEYLVYLGNNDETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE
Ga0255081_10306692	3300027155	Freshwater	QEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTNQKAHARCVDLMVLLAEITNLPEYLVYLGNNPDTNADPYGWITEYPAAEKIVEKTVDLENNV
Ga0255078_10185651	3300027156	Freshwater	QEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDLMVLLAEITNLPEYLVYLGNNDETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE
Ga0208921_10065471	3300027188	Estuarine	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGS
Ga0208165_10131981	3300027218	Estuarine	AYSQDQMEFAHKVVFRLMEILKVCPNVDDKYKCHTTHQAPHRRCVDLMVLLAEITNLPEYLEYLGNNPETNKDPYGWIIEYPPAEDIIAKTVDLE
Ga0255072_11054662	3300027508	Freshwater	MAYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDLMVLLAEITNLPEYLVYLGNNDETNKDPYGWIVAYPPAEAIVVEESNNTE
Ga0208437_10310131	3300027525	Estuarine	MDFAHKVVVRLMEILKVCPNVDDKYVCHTSTQKAHTRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYP
Ga0209552_10185271	3300027563	Freshwater Lake	MRLVVYSQEQMEFAHKVVFRLIEILKVCPNVDEKSKCHTVHMHTHKRCLDLMVLLAEITNLPEYLEYLGNNPETNKDPYGFIVAYPPAKEIIEKTVDLE
Ga0209651_11473891	3300027581	Freshwater Lake	MAYSQEQMDFAHKIVFRLMEILKVCPNVDDKYKCHTTHQKAHQRCVDLMVLLAEITNLPEYLEYLGNNSETNQDPYGFIVSYPAAESIVKHEIDKNEELIDIHGKVVDLE
Ga0255079_10077785	3300027601	Freshwater	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTNQKAHARCVDLMVLLAEITNLPEYLVYLGNNPDTNADPYGWITEYPDAEKIVEKTVDLENNV
Ga0209356_12234851	3300027644	Freshwater Lake	VSYSPEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTHQGAHRRCVDLMILLAEITNLPEYLEYLGNNPETNKDPYGFIVAYPSAEAIVKTIENNNEKVVDLE
Ga0209551_10205832	3300027689	Freshwater Lake	MTYSQEQMEMAHKIVFRLMEILKVCPHVDEKYRCHTTHQKAHQRCVDLMVLLAEITNLPEYITFLQNNPETKTDPFGWIVEYPPAETIIEKVVDLEEGYDYNKDV
Ga0209599_1000019510	3300027710	Deep Subsurface	MKLMAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYRCHTPTQKPHQRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVQGELNNDTKVVDLE
Ga0209770_100126522	3300027769	Freshwater Lake	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTTHQKAHARCVDLMFLLGEITNLPEYLTYLGNNPETKQDPYGWIVAYPEAEKIIEKTVDLENNV
Ga0209770_103718281	3300027769	Freshwater Lake	MAYSQEQMEFAHKVVFRLMEILKVCPNVDDKYKCHTSHKPAHQRCVDLMFLLAEITNLPEYLEYLGNNPETNQDPYGWIIAYPPAEAIVEKTDEKAVDLE
Ga0209550_100426755	3300027892	Freshwater Lake	MTYSQEQMDFAHKVVFRLMEILKVCPNVDDTYKCHTAHQKAHARCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPAAEKIVKKTVDLENNV
Ga0209550_100636804	3300027892	Freshwater Lake	MAYSQEQMDFAHKVVVRLMEILKVCPNVDDKYRCHTPTQKPHQRCVDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVQGELNNDTKVVDLE
Ga0209550_101939321	3300027892	Freshwater Lake	MSYSQEQMDFAHKVVFRLMEILKVCPNVDDKYKCHTAHEKAHARCLDLMVLLAEITNLPEYLMYLGNNPETKVDPYGWIISYPGSEKIVGEMVDIENNV
Ga0209550_103264121	3300027892	Freshwater Lake	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDLMVLLAEITNLPEYLVYLGNNDETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE
Ga0209550_104128661	3300027892	Freshwater Lake	MAYSQEQMEFAHKVVFRLMEILKVCPNVDDKYKCHTPNREPHKRCVDLMVLLAEITNLPEYLEYLGNNPETNQDPYGWIISYP
Ga0209550_104725263	3300027892	Freshwater Lake	MAYSQEQMDFAHKIVFRLMEILKVCPNVDEKYRCHTTNQKPHARCIDLMVLLAEITNLPEYLVYLGNNEETKVDPYGWILAYPPAEAIVEGALNNSEKAVDLE
Ga0209550_104904203	3300027892	Freshwater Lake	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTSHKPAHQRCVDLMFLLAEITNLPEYLEYLGNNPETNKDPYGWIIAYPPAETIAEKIDEKAVDLE
Ga0209400_100204519	3300027963	Freshwater Lake	MAYSQEQMEFAHKIVFRLMEILKVCPNVDDKYKCHTTHQPAHKRCVDIMVLLAEITNLPEYLVYLANNNETNKDPYGWIVAYPPAEAIVVEESNNTEKAVDLE
Ga0315901_106265624	3300031963	Freshwater	MAYSQDQMEFAHMVAFRLKEILEVCPNVDEKSTCWTVHEKAHQRCYDLMVLLAEITNLPEYLEFLGNHPETKVNPYGFITALPPAKRFKEDPETDI
Ga0315903_1006000014	3300032116	Freshwater	EFAHMVAFRLKEILEVCPNVDEKSTCWTVHEKAHQRCYDLMVLLAEITNLPEYLEFLGNHPETKVNPYGFITALPPAKRFKEDPETDIDFVQDIVDLEQ
Ga0334979_0000258_1783_2061	3300033996	Freshwater	MDFAHKVVFRLMEILKVCPNVDDKYKCHTAHQKAHTRCVDLMVLLAEITNLPEYLTYLGNNPETNKDPYGWITEYPVAEKIVEKTVDLENNV
Ga0334987_0270837_20_298	3300034061	Freshwater	MDFAHKVVFRLMEILKVCPNVDDKYKCHTTNQKAHARCVDLMVLLAEITNLPEYLVYLGNNPETNVDPYGWITEYPAAEKIVEKTVDLENNV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080026

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences