Metagenome / Metatranscriptome Family F080015

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080015
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	77 residues
Representative Sequence	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Number of Associated Samples	101
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.46 %
% of genes near scaffold ends (potentially truncated)	27.83 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.652 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (46.087 % of family members)
Environment Ontology (ENVO)	Unclassified (45.217 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.739 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.87% β-sheet: 16.04% Coil/Unstructured: 65.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
d.391.1.1: POlypeptide TRansport Associated (PORTRA) domain-like	d2qdfa2	2qdf	0.63
d.391.1.0: POlypeptide TRansport Associated (PORTRA) domain-like	d6j09a2	6j09	0.63
d.391.1.1: POlypeptide TRansport Associated (PORTRA) domain-like	d2qdfa2	2qdf	0.63
d.391.1.0: POlypeptide TRansport Associated (PORTRA) domain-like	d6j09a2	6j09	0.63
d.391.1.0: POlypeptide TRansport Associated (PORTRA) domain-like	d6j09a4	6j09	0.61
d.39.1.1: DLC	d7k3ka_	7k3k	0.61
d.391.1.0: POlypeptide TRansport Associated (PORTRA) domain-like	d6j09a4	6j09	0.61
d.39.1.1: DLC	d7k3ka_	7k3k	0.61
d.391.1.0: POlypeptide TRansport Associated (PORTRA) domain-like	d4xgab2	4xga	0.6
d.391.1.0: POlypeptide TRansport Associated (PORTRA) domain-like	d4xgab2	4xga	0.6

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF04266	ASCH	4.35
PF01494	FAD_binding_3	3.48
PF13662	Toprim_4	1.74
PF02782	FGGY_C	0.87
PF01436	NHL	0.87
PF02607	B12-binding_2	0.87
PF03176	MMPL	0.87
PF12679	ABC2_membrane_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	6.96
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	4.35
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	4.35
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	4.35
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	3.48
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	3.48
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	3.48
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.87
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.04 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	91.30 %
Unclassified	root	N/A	4.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	88.70 %
Unclassified	root	N/A	4.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	88.70 %
Unclassified	root	N/A	4.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_33887_len_808_cov_56_679455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	858	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig187748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	556	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101806722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2026	Open in IMG/M
3300000956\|JGI10216J12902_102918939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3683	Open in IMG/M
3300000956\|JGI10216J12902_113983839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2852	Open in IMG/M
3300001535\|A3PFW1_10138389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2182	Open in IMG/M
3300001537\|A2065W1_11284769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300001538\|A10PFW1_10086134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300004114\|Ga0062593_101009666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	854	Open in IMG/M
3300004114\|Ga0062593_102774327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	559	Open in IMG/M
3300004156\|Ga0062589_102169556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300004157\|Ga0062590_100658093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	934	Open in IMG/M
3300004463\|Ga0063356_103237445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300005328\|Ga0070676_11271295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300005333\|Ga0070677_10393609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	728	Open in IMG/M
3300005355\|Ga0070671_101875939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	533	Open in IMG/M
3300005367\|Ga0070667_102341004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300005436\|Ga0070713_100413292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1262	Open in IMG/M
3300005535\|Ga0070684_101692635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300005548\|Ga0070665_100939868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	877	Open in IMG/M
3300005617\|Ga0068859_101647034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	709	Open in IMG/M
3300005841\|Ga0068863_101027694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	827	Open in IMG/M
3300005842\|Ga0068858_101887223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	590	Open in IMG/M
3300006575\|Ga0074053_11201004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	893	Open in IMG/M
3300006606\|Ga0074062_12879553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1090	Open in IMG/M
3300006881\|Ga0068865_101393739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300009098\|Ga0105245_11104266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	839	Open in IMG/M
3300009156\|Ga0111538_12684584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300009551\|Ga0105238_11225915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300010147\|Ga0126319_1073398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	668	Open in IMG/M
3300010147\|Ga0126319_1159537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300010147\|Ga0126319_1251655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300010154\|Ga0127503_10203250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300010154\|Ga0127503_10352602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300010397\|Ga0134124_10756654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	967	Open in IMG/M
3300010399\|Ga0134127_12334025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300011444\|Ga0137463_1048368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1581	Open in IMG/M
3300011444\|Ga0137463_1343332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300012008\|Ga0120174_1003679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5967	Open in IMG/M
3300012019\|Ga0120139_1101852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	722	Open in IMG/M
3300012212\|Ga0150985_105453235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1078	Open in IMG/M
3300012469\|Ga0150984_115368927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300012882\|Ga0157304_1116561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	505	Open in IMG/M
3300012883\|Ga0157281_1110376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300012891\|Ga0157305_10166409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	606	Open in IMG/M
3300012895\|Ga0157309_10352038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	513	Open in IMG/M
3300012896\|Ga0157303_10192005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300012897\|Ga0157285_10053421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	993	Open in IMG/M
3300012898\|Ga0157293_10038652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1005	Open in IMG/M
3300012900\|Ga0157292_10408008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	516	Open in IMG/M
3300012901\|Ga0157288_10015614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1364	Open in IMG/M
3300012903\|Ga0157289_10208374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300012906\|Ga0157295_10013129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1517	Open in IMG/M
3300012908\|Ga0157286_10257917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	618	Open in IMG/M
3300012911\|Ga0157301_10363976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300012911\|Ga0157301_10448559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300012916\|Ga0157310_10188978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	740	Open in IMG/M
3300012951\|Ga0164300_10676394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	621	Open in IMG/M
3300012955\|Ga0164298_11191173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300012957\|Ga0164303_10119910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1340	Open in IMG/M
3300012958\|Ga0164299_10891000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300012960\|Ga0164301_10514856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	866	Open in IMG/M
3300012987\|Ga0164307_10042753	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300013102\|Ga0157371_10640660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	793	Open in IMG/M
3300013501\|Ga0120154_1102161	All Organisms → cellular organisms → Bacteria → Terrabacteria group	655	Open in IMG/M
3300013503\|Ga0120127_10168347	Not Available	532	Open in IMG/M
3300014056\|Ga0120125_1193900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300015077\|Ga0173483_10218032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	889	Open in IMG/M
3300015077\|Ga0173483_10684436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300015085\|Ga0167632_1000056	All Organisms → cellular organisms → Bacteria	25671	Open in IMG/M
3300015190\|Ga0167651_1008833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2295	Open in IMG/M
3300015192\|Ga0167646_1002752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5908	Open in IMG/M
3300015371\|Ga0132258_12593688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1266	Open in IMG/M
3300015371\|Ga0132258_13992233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1001	Open in IMG/M
3300018072\|Ga0184635_10233816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M
3300018432\|Ga0190275_13476014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300018466\|Ga0190268_11795913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300018469\|Ga0190270_10130183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2000	Open in IMG/M
3300018476\|Ga0190274_12830063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300019356\|Ga0173481_10234092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	817	Open in IMG/M
3300019361\|Ga0173482_10204443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	811	Open in IMG/M
3300020005\|Ga0193697_1138264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300020021\|Ga0193726_1353880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300022880\|Ga0247792_1153943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300022886\|Ga0247746_1155333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300022898\|Ga0247745_1010569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1238	Open in IMG/M
3300023072\|Ga0247799_1102964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	515	Open in IMG/M
3300025907\|Ga0207645_11031610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	556	Open in IMG/M
3300025915\|Ga0207693_11472679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300026088\|Ga0207641_12031251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300028380\|Ga0268265_10946754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	848	Open in IMG/M
3300028708\|Ga0307295_10071571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	913	Open in IMG/M
3300028708\|Ga0307295_10217185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300028712\|Ga0307285_10049695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1044	Open in IMG/M
3300028719\|Ga0307301_10254190	Not Available	574	Open in IMG/M
3300028720\|Ga0307317_10078427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1082	Open in IMG/M
3300028755\|Ga0307316_10077887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1139	Open in IMG/M
3300028771\|Ga0307320_10288233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	651	Open in IMG/M
3300028790\|Ga0307283_10032213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1172	Open in IMG/M
3300028802\|Ga0307503_10440469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	690	Open in IMG/M
3300028803\|Ga0307281_10002307	All Organisms → cellular organisms → Bacteria	5292	Open in IMG/M
3300028803\|Ga0307281_10044046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1384	Open in IMG/M
3300028814\|Ga0307302_10475422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300028819\|Ga0307296_10055502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2095	Open in IMG/M
3300028819\|Ga0307296_10452012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300030903\|Ga0308206_1103954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	640	Open in IMG/M
3300031058\|Ga0308189_10474080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300031091\|Ga0308201_10381474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300031093\|Ga0308197_10360990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	556	Open in IMG/M
3300031114\|Ga0308187_10390477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	547	Open in IMG/M
3300031366\|Ga0307506_10110679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	914	Open in IMG/M
3300032180\|Ga0307471_102959789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.74%
Host-Associated	Host-Associated	18.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.78%
Plants	Host-Associated → Plants	18.26%
Aquatic	Environmental → Aquatic	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.70%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Sediment	Environmental → Aquatic → Sediment	2.61%
Floodplain	Environmental → Terrestrial → Floodplain	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.09%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Loam	Environmental → Terrestrial → Soil → Loam	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.09%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	46.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.96%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	4.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.48%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.61%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_01595200	2088090008	Soil	LSTTLVLNPREDTSFVALAEAIVAEGVDSPGELEGKLRPHYPSVVVRARELEGETFTIWYVYRDGHWIPGPAGAPKGG
KansclcFeb2_12230480	2124908045	Soil	MSTTLVVNPRDDRPFVALAESLVADGARSPDELQTRLREEYPEAVVRARELDGEAFTIWYVYRDGHWVSGAREPRGAGHGGL
INPhiseqgaiiFebDRAFT_1018067223	3300000364	Soil	MSTTLVVNPRNDTPFVALAERLVADGVRSPDDLQQRLRRQYPEAVVRARELDGEAFTIWYVYRDGHWVAGSLEQPEGG*
JGI10216J12902_1029189395	3300000956	Soil	MSTTLVVNPRHDTPFVALAEGLVADGVRSPEELQDRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVPGYPEPPKGG*
JGI10216J12902_1139838393	3300000956	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSTDDLQRQLRREYPLAVVRARELDGEAFTIWYVYRDGHWVSGSTGQPRGG*
A3PFW1_101383891	3300001535	Permafrost	STTLVLNPRDDVGFVARAEALASDGIDTPLELQERLRRDYPDAVVRARELTGEAFTIWYVYRDGHWIPGLAGAPEGG*
A2065W1_112847692	3300001537	Permafrost	VSTTLVLNPRDDVGFVALAEALASDGIDSPLELQERLRRDYPDAVVRARELTGEAFTIWYVYRDGHWIPGLAGAPEGG*
A10PFW1_100861341	3300001538	Permafrost	LVLNPRDDVRFVALAESLASDGIDSPLELQERLRRDYPDAVVRARELTGEAFTIWYVYRDGHWVPGLGGVPAGG*
Ga0062593_1010096661	3300004114	Soil	MSTTLVVNPRDDTPFVAMAERLVSDGVRSPNELQERLRREYPEAVVRARELDGEAFTIWYVYRDGHWV
Ga0062593_1027743272	3300004114	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSAVQSEGG*
Ga0062589_1021695562	3300004156	Soil	MSTTLVVNPRDDTPFVTMAERLVADGVRSPNELQERLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSG
Ga0062590_1006580932	3300004157	Soil	MSTTLVVNPRDDTPFVTMAERLVADGVRSPNELQERLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGVRGEPQGG*
Ga0063356_1032374452	3300004463	Arabidopsis Thaliana Rhizosphere	MSTTLVVNPRDDTPFVAMAERLVSDGVRSPNELQERLRREYPEAVVRARELDGEAFTIWYVYRDGH
Ga0070676_112712951	3300005328	Miscanthus Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0070677_103936091	3300005333	Miscanthus Rhizosphere	MSTTLVVNPRDDTPFVTMAERLVADGVRSPNELQERLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGVRGEQGG*
Ga0070671_1018759392	3300005355	Switchgrass Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0070667_1023410042	3300005367	Switchgrass Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHW
Ga0070713_1004132922	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSITLVLNPRADAKFVALAEAIVADGIAAPLELQARLRQEYPGAIVRARELDGESQSIWYVYRDGHWIPAAGGPPEELHHA*
Ga0070684_1016926352	3300005535	Corn Rhizosphere	MPTTIVVNPRDDTPFAALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0070665_1009398682	3300005548	Switchgrass Rhizosphere	MSTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0068859_1016470341	3300005617	Switchgrass Rhizosphere	PTTIVVNPRDDTPFAALAEKLMADGARSTGELQDQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0068863_1010276942	3300005841	Switchgrass Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGRQSKGG*
Ga0068858_1018872231	3300005842	Switchgrass Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQ
Ga0074053_112010042	3300006575	Soil	MPTTIVVNPRDDTPFVALAEKLVADGARNTGELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0074062_128795532	3300006606	Soil	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQAQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0068865_1013937391	3300006881	Miscanthus Rhizosphere	TRERRMPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGRSKGG*
Ga0105245_111042661	3300009098	Miscanthus Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVTDGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0111538_126845841	3300009156	Populus Rhizosphere	MSTTLVVNPRDDTPFVAMAERLVADGVRSPNELQDRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVSGVRGEPQGG*
Ga0105238_112259153	3300009551	Corn Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQDQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVPGSGEQSKGG*
Ga0126319_10733983	3300010147	Soil	TRERRMPTTIVVNPRDDTPFVAMAERLVADGARSPGELQEQLRPEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSAVQSEGG*
Ga0126319_11595371	3300010147	Soil	DTRFVARAEAIVGDGIDAPYELQARLRVDYPGAIVRARELDGEAQSIWYVYRDGHWISAAAGPPEEKQRV*
Ga0126319_12516551	3300010147	Soil	AQGSGGMSATLVVNPRDDTPFVALAESLVADGVHSPDELQERLRREYPEAVVRARELDGEAFTIWYVYRDGHWVTGSRGRPKGG*
Ga0127503_102032501	3300010154	Soil	GTRERRMPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0127503_103526021	3300010154	Soil	AVPTTLVLNPRDDARFVALAEGMVADGVESPFDLQARLRQDYPNAVVRARDLDGEALSIWYVYRDGHWTPKQIGAAEDE*
Ga0134124_107566541	3300010397	Terrestrial Soil	ERRMPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0134127_123340251	3300010399	Terrestrial Soil	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0137463_10483684	3300011444	Soil	MSTTLVVNPRDDTPFVALAEGLVADGVHTPDELQERLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSEQSKGG*
Ga0137463_13433322	3300011444	Soil	MSTTLVVNPRGDTPFVALAERLVADGVHSPGELQERLRREYPEAVVRARELDGEAFTIWYVYRDGHWVTGSPEQPKGG*
Ga0120174_10036794	3300012008	Permafrost	VSTTLVLNPRDDVRFVALAESLASDGIDSPLELQERLRRDYPDAVVRARELTGEAFTIWYVYRDGHWVPGLGGVPAGG*
Ga0120139_11018522	3300012019	Permafrost	VSTTLVLNPRDDARFVALAEEIASAGTDTPLEFQERLRRDYPNAVVRARELTGEAFTIWYVYRDGHWIPSPDVQPEGG*
Ga0150985_1054532353	3300012212	Avena Fatua Rhizosphere	MSTTLVVNPRDDTPFVALAERVVAEGVRSPSELQHRLRQEYPDAVVRARELDGEAFTIWYVYRDGHWVTGSREQPEGG*
Ga0150984_1153689271	3300012469	Avena Fatua Rhizosphere	AQGSGAMSTTLVVNPRDDTPFVALAERVVAEGVRSPSELQHRLRQEYPDAVVRARELDGEAFTIWYVYRDGHWVTGSREQPEGG*
Ga0157304_11165612	3300012882	Soil	MPTTIVVNPRDDAPFVALAERLVGDGARSTGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0157281_11103762	3300012883	Soil	MPTSIVVNPRDDMPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0157305_101664092	3300012891	Soil	MPTTIVVNPRDDTPFAALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0157309_103520382	3300012895	Soil	MSTTIVVNPRDDTPFVALAEKLVADGARSTDELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0157303_101920051	3300012896	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSDGRPKGG*
Ga0157285_100534213	3300012897	Soil	MPTTIVVNPRDDTPFAALPEKIVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0157293_100386522	3300012898	Soil	MPTTIVVNPRDDTPFVALAEKLVADGARSTDELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0157292_104080082	3300012900	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVPGSGEQSKGG*
Ga0157288_100156142	3300012901	Soil	MSTTIVVNPRDDTPFVALAEKLVADGARSTDELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0157289_102083741	3300012903	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0157295_100131291	3300012906	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSEGG*
Ga0157286_102579172	3300012908	Soil	MPTTIVVNPRDDTPFVALAEKLVADGGRSTDELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0157301_103639761	3300012911	Soil	FVELAEKLVAGGARSTGELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0157301_104485591	3300012911	Soil	MPTTIVVNPRDDAPFVALAERLVADGVRSTGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG*
Ga0157310_101889781	3300012916	Soil	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRLEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSAVQSEGG*
Ga0164300_106763941	3300012951	Soil	MPTTIVVNPRDDAPFVALAERLVDDGARSTGELQEQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0164298_111911732	3300012955	Soil	MPTTIVVNPRDDAPFVALAERLVADGARSTGELQEELRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0164303_101199101	3300012957	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSG
Ga0164299_108910002	3300012958	Soil	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQGQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0164301_105148563	3300012960	Soil	MPTTIVVNPRDDAPFVALAERLVADGARSTGELQEQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0164307_100427533	3300012987	Soil	MPTTIVVNPRDDAPFVALAERLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0157371_106406601	3300013102	Corn Rhizosphere	DTPFVALAEKLVADGARSTGELQDQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVPGSGEQSKGG*
Ga0120154_11021611	3300013501	Permafrost	VALAEALASDGIDSPLELQERLRRDYPDAVVRARELTGEAFTIWYVYRDGHWIPGLAGAPEGG*
Ga0120127_101683471	3300013503	Permafrost	VSTTLVLNPRDDARFVALAEEIASTGTDTPLQFQERLRRDYPNAVVRARELTGEAFPIWYVYR
Ga0120125_11939002	3300014056	Permafrost	VSTTLVLNPRDDARFVALAEEIASTGADTPLAFQERLRHDYPNAVVRARELTGEAFTIWYVYRDGHWIPSPDAQPEGG*
Ga0173483_102180322	3300015077	Soil	MPTTIVVNPRDDMPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSDGRPKGG*
Ga0173483_106844362	3300015077	Soil	MSTTLVVNPRDDTPFVTMAERLVADGVRSPNELQERLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGVRG
Ga0167632_100005621	3300015085	Glacier Forefield Soil	LSTTLILNPRDDASFVALAEQFVSEGVATAAELQKRLQTAYPDVVVRARELTGEPFTIWYVYRDGHWISGPVGAPEGG*
Ga0167651_10088332	3300015190	Glacier Forefield Soil	MSTTLVLNPRHDPEFVTFAEAAMSAGVASPGELQEHLRHRYPHAVARARELNGEAFTIWYVYRDGHWIPGLVNAAGGG*
Ga0167646_10027525	3300015192	Glacier Forefield Soil	VSPTLVLNPRQDTDFVRLAESIVAEGIDSPGGLQERLRPTYPLAVVRARELTGEAFTIWYVYRDGHWIPGLSQAPEGG*
Ga0132258_125936882	3300015371	Arabidopsis Rhizosphere	MPTTIVVNPRDDTPFVALAESLVADGARSPDDLQRELRREDPDAVVRARELDGEAFTIWYVYRDGHWVSGSAGQPEGG*
Ga0132258_139922332	3300015371	Arabidopsis Rhizosphere	MPTTIVVNPRDDSPFVAMAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG*
Ga0184635_102338162	3300018072	Groundwater Sediment	MSTTLVVNPRDDTPFVRLAERLVADGVRSPSELQDRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGAEPKGG
Ga0190275_134760141	3300018432	Soil	MSTTLVVNPRDDRPFVALAERLVADGVRSPDELQTRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVSGAGGEPGGG
Ga0190268_117959131	3300018466	Soil	MSTTLVVNPRDDTPFVTMAERLVADGVRSPNELQEGLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGSGGEPKGG
Ga0190270_101301834	3300018469	Soil	MSTTLVVNPRDDTPFVTMAERLVADGVRSPNELQERLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGVRGEAQGG
Ga0190274_128300631	3300018476	Soil	NPRDDTPFVDLAERLVADGVRSPKELQDRLRREYPDAVVRARELDGEAFTIWYVYRDGHWVSGVRGEPQGG
Ga0173481_102340921	3300019356	Soil	MSTTIVVNPRDDTPFVALAEKLVADGARSTDELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Ga0173482_102044432	3300019361	Soil	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSAVQSEGG
Ga0193697_11382642	3300020005	Soil	MSTTLVVNPRDDTPFVALAERLVADGVRSPKELQDRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVPGSPDRPKGG
Ga0193726_13538802	3300020021	Soil	VSTTLVLNPRHDTAFVALAEALAMDGVGTPAELEARLRAHYPNVLVRARELADEPFTMWYVYRDGHWVPAPPRDRAGGSS
Ga0247792_11539431	3300022880	Soil	MSTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSSGQSKGG
Ga0247746_11553332	3300022886	Soil	MPTTIVVNPRDDTPFAALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Ga0247745_10105693	3300022898	Soil	MPTTIVVNPRDDTPFVALAERLVADGARSPGELQQQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSAVQSEGG
Ga0247799_11029641	3300023072	Soil	MPTTLVVNPRDDSPFVALAERLVADGVHSPAELQARLRQEYPETVVRARELDGEAFSIWYVYRDGHWVSASREGPKGG
Ga0207645_110316102	3300025907	Miscanthus Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Ga0207693_114726791	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	APVSITLVLNPRTDPKFVALAEAIVADGVAEPLELQARLRQEYPAAIVRARELDGEAQSVWYVYRDGHWIPAAGGPPEELHHA
Ga0207641_120312511	3300026088	Switchgrass Rhizosphere	MPTTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGRQSKGG
Ga0268265_109467543	3300028380	Switchgrass Rhizosphere	MPRTIVVNPRDDTPFVALAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Ga0307295_100715711	3300028708	Soil	MSTTLVVNPREDTPFVTLAERLVADGVRSPDELQDRLRREYPEAVVRARELDGEAFTIWYVYRDGHWVTGSPERPKGG
Ga0307295_102171852	3300028708	Soil	MPTTLVVNPRDDTPFVALAERLVADGVRSPAELQERLRPEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Ga0307285_100496952	3300028712	Soil	MPTTIVVNPRDDAPFVALAERLVADGVRSTGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVPGSGEQSKGG
Ga0307301_102541902	3300028719	Soil	VAPTLILNPRNDARFVAVAEAIVSEGVASPGKLQERLRRDYPEVVVRPRELTGEVLTVWYVYRDGYWTSSPEGTQKEADGV
Ga0307317_100784273	3300028720	Soil	MPTTLVVNPRDDTPFVALAERLVADGVRSPAELQERLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSAAPPEGG
Ga0307316_100778872	3300028755	Soil	MSTTLVVNPREDTPFVTLAERLVADGVRSPDELQDRLRREYPEAVVRARDLDGEAFTIWYVYRDGHWITGSQEQPKGG
Ga0307320_102631543	3300028771	Soil	VLAPTLILNPRHDGRFVAVAEATVSDGVSSPQELQARLRPQYPQVVVRARELTGEAFTIWYVYRDGHWVSSQEGHDKDG
Ga0307320_102882332	3300028771	Soil	MSTTLVVNPRDDTPFVALAERLVADGVRSPDELQDRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSPDRPKGG
Ga0307283_100322132	3300028790	Soil	VALAERLVADGVRSTGELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVPGSGEQSKGG
Ga0307503_104404691	3300028802	Soil	MPTTIVVNPRDDTPFVVLAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Ga0307281_100023074	3300028803	Soil	MSTTLVVNPRDDTPFVALAERLVADGVRSPNELQARLRREYPDAVVRARELDGEAFTIWYVYRDGHWVTGSPKHPKGG
Ga0307281_100440462	3300028803	Soil	MSTTLVVNPRDDTPFVALAERLVADGARSPDELQARLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSKGQPKGG
Ga0307281_101318032	3300028803	Soil	VPITLVLNPRDDPPFVGLAEAIVTEGIGAPAELQTRLRQAYPNAIVRARELDGEAQSIWYVYRDGHWIPAERGGARETDGG
Ga0307302_104754222	3300028814	Soil	MSTTLVVNPRGDTPFVALAERLVADGVRSPDELQDRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSPERPKGG
Ga0307296_100555024	3300028819	Soil	MSTTLVVNPRSDTPFVGLAERLMADGVRSPEDLQQRLRREYPEAVVRARELDGEAFTIWYVYRDGHWITGSREQPEGG
Ga0307296_104520122	3300028819	Soil	MPTTIVVNPRDDTPFVAMAERLVADGVRSTDELQQQLRREYPDAVVRARELDGEAFTIWYVYRDGHWVPGSGEQSKGG
Ga0308206_11039541	3300030903	Soil	RTQGSGVMSTTLVVNPRDDTPFVALAERLVADGVRSPDELQDRLRQEYPEAVVRARELDGEAFTIWYVYRDGHWVSGSPDRPKGG
Ga0308189_104740801	3300031058	Soil	RKGSGGMSTTLVVNPREDTPFVTLAERLVADGVRSPDELQDRLRREYPEAVVRARDLDGEAFTIWYVYRDGHWITGSQEQPKGG
Ga0308201_103814741	3300031091	Soil	SGGMSTTLVVNPREDTPFVTLAERLVADGVRSPDELQDRLRREYPEAVVRARDLDGEAFTIWYVYRDGHWITGSQEQPKGG
Ga0308197_103609901	3300031093	Soil	EDTPFVTLAERLVADGVRSPDELQDRLRREYPEAVVRARDLDGEAFTIWYVYRDGHWITGSQEQPKGG
Ga0308187_103904771	3300031114	Soil	CNLSRGGLDVGRVRAQGSGGMSTTLVVNPRDDTPFVALAEGLVADGVRSPSELQERLRREYPEAVVRARELDGEAFTIWYVYRDGHWVTGSPERPKGG
Ga0307506_101106792	3300031366	Soil	MPTTIVVNPRDDTPFVAFAEKLVADGARSTGELQEQLRREYPEAVVRARELDGEAFTIWYVYRDGHWVSGSGGQSKGG
Ga0307471_1029597892	3300032180	Hardwood Forest Soil	MPITLVLNPRADPKFVALAEGIVAGGVATPVEMQARLRQDYPGAIVRARELDGEAQSIWYVYRDGHWIPAAERPPQELHHA
Ga0364945_0104485_581_817	3300034115	Sediment	MAPTLILNPRQDARFVTAAEALIADGVESPRELQERLREHYPEVVVRPRELTGESFAVWYVYRDGHWISSPEGSKPGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080015

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences