Metagenome / Metatranscriptome Family F080014

Basic Information
Family ID	F080014
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	41 residues
Representative Sequence	PGFDVVGSPAELQAEVAGWPRKSTGNNASAKNDLALAA
Number of Associated Samples	103
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.83 %
% of genes near scaffold ends (potentially truncated)	93.04 %
% of genes from short scaffolds (< 2000 bps)	89.57 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Unclassified (64.348 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.043 % of family members)
Environment Ontology (ENVO)	Unclassified (25.217 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.826 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.30% β-sheet: 0.00% Coil/Unstructured: 69.70%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01668	SmpB	3.48
PF07883	Cupin_2	2.61
PF00211	Guanylate_cyc	1.74
PF00589	Phage_integrase	1.74
PF00561	Abhydrolase_1	1.74
PF01810	LysE	0.87
PF07366	SnoaL	0.87
PF01425	Amidase	0.87
PF01370	Epimerase	0.87
PF02899	Phage_int_SAM_1	0.87
PF07726	AAA_3	0.87
PF03704	BTAD	0.87
PF07676	PD40	0.87
PF03861	ANTAR	0.87
PF07731	Cu-oxidase_2	0.87
PF01643	Acyl-ACP_TE	0.87
PF01850	PIN	0.87
PF12728	HTH_17	0.87
PF04655	APH_6_hur	0.87
PF13302	Acetyltransf_3	0.87
PF07859	Abhydrolase_3	0.87
PF05977	MFS_3	0.87
PF12680	SnoaL_2	0.87
PF00293	NUDIX	0.87
PF05866	RusA	0.87
PF02494	HYR	0.87
PF00196	GerE	0.87
PF06441	EHN	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.74
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.87
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.87
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.87
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.87
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.87
COG3570	Streptomycin 6-kinase	Defense mechanisms [V]	0.87
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.87
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.87
COG3884	Acyl-ACP thioesterase	Lipid transport and metabolism [I]	0.87
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.87
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	0.87
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.87
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
All Organisms	root	All Organisms	35.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
cellular organisms	root	All Organisms → cellular organisms	35.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.91 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.35 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.43 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.87 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.87 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.87 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.87 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.87 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.87 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.87 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.87 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.87 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Spirurina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Ascaridomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Ascaridoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha → Ascaridoidea	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Toxocaridae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha → Ascaridoidea → Toxocaridae	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Toxocara	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha → Ascaridoidea → Toxocaridae → Toxocara	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.70 %
Toxocara canis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha → Ascaridoidea → Toxocaridae → Toxocara → Toxocara canis	0.87 %
Nocardioides sp. URHA0032	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	0.87 %
Chloroflexia bacterium SDU3-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	0.87 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.87 %
Actinobacteria bacterium RBG_16_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001205\|C688J13580_1030433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300001686\|C688J18823_10339543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300002568\|C688J35102_118393177	Not Available	555	Open in IMG/M
3300002568\|C688J35102_119980031	Not Available	834	Open in IMG/M
3300002915\|JGI25387J43893_1066312	Not Available	532	Open in IMG/M
3300004070\|Ga0055488_10220667	Not Available	519	Open in IMG/M
3300005171\|Ga0066677_10272979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300005175\|Ga0066673_10167992	Not Available	1232	Open in IMG/M
3300005176\|Ga0066679_10032112	All Organisms → cellular organisms → Bacteria	2904	Open in IMG/M
3300005179\|Ga0066684_11105059	Not Available	507	Open in IMG/M
3300005181\|Ga0066678_10939023	Not Available	564	Open in IMG/M
3300005181\|Ga0066678_10953228	Not Available	559	Open in IMG/M
3300005186\|Ga0066676_11007222	Not Available	554	Open in IMG/M
3300005332\|Ga0066388_101275990	Not Available	1264	Open in IMG/M
3300005333\|Ga0070677_10811786	Not Available	535	Open in IMG/M
3300005334\|Ga0068869_101343118	Not Available	631	Open in IMG/M
3300005364\|Ga0070673_102306378	Not Available	512	Open in IMG/M
3300005434\|Ga0070709_11074744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300005454\|Ga0066687_10649962	Not Available	627	Open in IMG/M
3300005455\|Ga0070663_101787138	Not Available	551	Open in IMG/M
3300005458\|Ga0070681_10219515	Not Available	1816	Open in IMG/M
3300005526\|Ga0073909_10008287	All Organisms → cellular organisms → Bacteria	3107	Open in IMG/M
3300005555\|Ga0066692_10406820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300005561\|Ga0066699_11270337	Not Available	505	Open in IMG/M
3300005563\|Ga0068855_101381229	Not Available	726	Open in IMG/M
3300005569\|Ga0066705_10080765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1898	Open in IMG/M
3300005576\|Ga0066708_10470314	Not Available	808	Open in IMG/M
3300005576\|Ga0066708_10605530	Not Available	701	Open in IMG/M
3300005587\|Ga0066654_10781116	Not Available	541	Open in IMG/M
3300005764\|Ga0066903_100426281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2200	Open in IMG/M
3300005764\|Ga0066903_101586323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1240	Open in IMG/M
3300005764\|Ga0066903_105567989	Not Available	663	Open in IMG/M
3300005844\|Ga0068862_102176079	Not Available	566	Open in IMG/M
3300005985\|Ga0081539_10027951	All Organisms → cellular organisms → Bacteria	3557	Open in IMG/M
3300006046\|Ga0066652_101730448	Not Available	568	Open in IMG/M
3300006576\|Ga0074047_10018406	Not Available	502	Open in IMG/M
3300006795\|Ga0075520_1148846	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300006796\|Ga0066665_10943227	Not Available	665	Open in IMG/M
3300006844\|Ga0075428_100392136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1488	Open in IMG/M
3300006846\|Ga0075430_100181551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1750	Open in IMG/M
3300006846\|Ga0075430_100859369	Not Available	747	Open in IMG/M
3300006871\|Ga0075434_100032131	All Organisms → cellular organisms → Bacteria	5175	Open in IMG/M
3300006876\|Ga0079217_10756133	Not Available	665	Open in IMG/M
3300006876\|Ga0079217_10923386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300006903\|Ga0075426_10032356	All Organisms → cellular organisms → Bacteria	3739	Open in IMG/M
3300006904\|Ga0075424_100935343	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300006954\|Ga0079219_10582595	Not Available	813	Open in IMG/M
3300006969\|Ga0075419_10025242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3681	Open in IMG/M
3300009094\|Ga0111539_12400767	Not Available	612	Open in IMG/M
3300009094\|Ga0111539_12852888	Not Available	560	Open in IMG/M
3300009137\|Ga0066709_104667404	Not Available	501	Open in IMG/M
3300009147\|Ga0114129_10119722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3626	Open in IMG/M
3300009147\|Ga0114129_12173406	Not Available	668	Open in IMG/M
3300009156\|Ga0111538_10466074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1601	Open in IMG/M
3300009553\|Ga0105249_12929993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300009807\|Ga0105061_1073832	Not Available	559	Open in IMG/M
3300009808\|Ga0105071_1064332	Not Available	615	Open in IMG/M
3300009817\|Ga0105062_1129470	Not Available	517	Open in IMG/M
3300009819\|Ga0105087_1085640	Not Available	568	Open in IMG/M
3300010060\|Ga0127425_106299	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha → Ascaridoidea → Toxocaridae → Toxocara → Toxocara canis	649	Open in IMG/M
3300010098\|Ga0127463_1040476	All Organisms → cellular organisms → Eukaryota → Opisthokonta	502	Open in IMG/M
3300010104\|Ga0127446_1018840	Not Available	504	Open in IMG/M
3300010371\|Ga0134125_11136471	Not Available	854	Open in IMG/M
3300010398\|Ga0126383_12110986	Not Available	650	Open in IMG/M
3300010403\|Ga0134123_12090556	Not Available	626	Open in IMG/M
3300012209\|Ga0137379_11765772	Not Available	514	Open in IMG/M
3300012211\|Ga0137377_10988238	Not Available	772	Open in IMG/M
3300012377\|Ga0134029_1107912	Not Available	528	Open in IMG/M
3300012397\|Ga0134056_1248286	Not Available	626	Open in IMG/M
3300012404\|Ga0134024_1068625	Not Available	539	Open in IMG/M
3300014325\|Ga0163163_13255558	Not Available	506	Open in IMG/M
3300014488\|Ga0182001_10096195	All Organisms → cellular organisms → Bacteria → Terrabacteria group	909	Open in IMG/M
3300014497\|Ga0182008_10337752	Not Available	796	Open in IMG/M
3300015359\|Ga0134085_10438305	Not Available	591	Open in IMG/M
3300015371\|Ga0132258_10273983	All Organisms → cellular organisms → Bacteria	4138	Open in IMG/M
3300015371\|Ga0132258_10890716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium SDU3-3	2247	Open in IMG/M
3300015371\|Ga0132258_12850586	Not Available	1203	Open in IMG/M
3300016404\|Ga0182037_10639223	Not Available	906	Open in IMG/M
3300017947\|Ga0187785_10132617	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300018028\|Ga0184608_10398646	Not Available	598	Open in IMG/M
3300018060\|Ga0187765_10181169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300018073\|Ga0184624_10068711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1472	Open in IMG/M
3300018422\|Ga0190265_10583425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_16_68_12	1236	Open in IMG/M
3300018422\|Ga0190265_11461340	Not Available	797	Open in IMG/M
3300018433\|Ga0066667_11148855	Not Available	674	Open in IMG/M
3300018466\|Ga0190268_11743441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300019249\|Ga0184648_1263179	Not Available	532	Open in IMG/M
3300019361\|Ga0173482_10398266	Not Available	639	Open in IMG/M
3300020059\|Ga0193745_1096145	Not Available	634	Open in IMG/M
3300020069\|Ga0197907_10158716	Not Available	541	Open in IMG/M
3300020075\|Ga0206349_1723916	Not Available	604	Open in IMG/M
3300025324\|Ga0209640_10026400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. URHA0032	5062	Open in IMG/M
3300025791\|Ga0210115_1041352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	998	Open in IMG/M
3300025935\|Ga0207709_10917417	Not Available	713	Open in IMG/M
3300026116\|Ga0207674_10754158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	939	Open in IMG/M
3300026221\|Ga0209848_1079631	Not Available	576	Open in IMG/M
3300026535\|Ga0256867_10344234	Not Available	521	Open in IMG/M
3300026550\|Ga0209474_10236958	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1136	Open in IMG/M
3300027332\|Ga0209861_1061707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300027636\|Ga0214469_1089237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	912	Open in IMG/M
3300027907\|Ga0207428_11000109	Not Available	588	Open in IMG/M
3300027961\|Ga0209853_1029576	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300028717\|Ga0307298_10076231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300028768\|Ga0307280_10005294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3341	Open in IMG/M
3300028787\|Ga0307323_10123352	Not Available	932	Open in IMG/M
3300028819\|Ga0307296_10329720	Not Available	833	Open in IMG/M
3300030635\|Ga0247627_10354449	Not Available	506	Open in IMG/M
3300030986\|Ga0308154_104630	Not Available	792	Open in IMG/M
3300030993\|Ga0308190_1161168	Not Available	541	Open in IMG/M
3300031091\|Ga0308201_10381860	Not Available	525	Open in IMG/M
3300031491\|Ga0314824_104096	Not Available	706	Open in IMG/M
3300031547\|Ga0310887_10950796	Not Available	546	Open in IMG/M
3300031716\|Ga0310813_12039120	Not Available	541	Open in IMG/M
3300031892\|Ga0310893_10202025	Not Available	802	Open in IMG/M
3300034676\|Ga0314801_175513	Not Available	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.65%
Host-Associated	Host-Associated	24.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.43%
Plants	Host-Associated → Plants	24.35%
Aquatic	Environmental → Aquatic	5.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.96%
Freshwater	Environmental → Aquatic → Freshwater	1.74%
Marine	Environmental → Aquatic → Marine	1.74%
Sediment	Environmental → Aquatic → Sediment	1.74%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.91%
Loam	Environmental → Terrestrial → Soil → Loam	11.30%
Sand	Environmental → Terrestrial → Soil → Sand	5.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.22%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.87%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.22%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.87%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300010060	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010098	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027332	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027636	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeq	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030635	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031491	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080014

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J13580_10304332	3300001205	Soil	VVGSPAELQAEVAGWPRKSTGNNASAKNDLALAA*
C688J18823_103395432	3300001686	Soil	VVDSPAELQAEVAGWPRKSTGKTVRAKTNLALAA*
C688J35102_1183931772	3300002568	Soil	GRHGFDVVGSPGELQAEVSGRPPKTTGTNASAENNLALAA*
C688J35102_1199800311	3300002568	Soil	RGRHGFDVVGSPAELQAEVSGRPRKTTGNQKVSAENKLALAA*
JGI25387J43893_10663121	3300002915	Grasslands Soil	MQLDIRGRPGFDVVGSPAELQAEVAGWPRKSTGKNASANDKLALAA*
Ga0055488_102206671	3300004070	Natural And Restored Wetlands	LWGRSGFDGVGSPEELQAEVPGGLVKQPGNNVSADRNELALAA*
Ga0066677_102729791	3300005171	Soil	HIRGRPGFDVVGSPAELQAEVAGRPRKTTGTNASAKTDLALAA*
Ga0066673_101679924	3300005175	Soil	TYGGDLVDVVGSPAELQAEVAGWPRKSTGKHVSAKNDLALAA*
Ga0066679_100321125	3300005176	Soil	IRGRSGLDVVDSPAELQAEVAGWPRKSTGTNASAKQNLALAA*
Ga0066684_111050592	3300005179	Soil	TYIRGRHGFDVVGSPGELQAEVSGGLQNNRKNNASAENNLALAA*
Ga0066678_109390233	3300005181	Soil	IEATMCAHIRGRSGFDVVDSPAELQAEVPGRPPKTTGTNASANDNLALAA*
Ga0066678_109532281	3300005181	Soil	NIRGRHGFDVVGSPGELQAEVSGRPPKTTGTNASADHDLALAA*
Ga0066676_110072222	3300005186	Soil	DIRGRPGFDVVGSPAELQAEVAGRPRKTTGTNASAKNELALAA*
Ga0066388_1012759902	3300005332	Tropical Forest Soil	GFDVVDSPVELQAEVPGRPRKTTGINVSAKNDHALALAA*
Ga0070677_108117861	3300005333	Miscanthus Rhizosphere	IRGRPGFDVVGSPVELQAEVPGRPRKTTGKRTNAKNELAIAA*
Ga0068869_1013431181	3300005334	Miscanthus Rhizosphere	WGRPGFDVVGSPEELQAEVPGRPRKTTGNKASAKNDLALAA*
Ga0070673_1023063782	3300005364	Switchgrass Rhizosphere	IRGRPGFDVVGSPAELQAEVPGRPRKTTGNKASAKNDLALAA*
Ga0070709_110747442	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IRGRPGFDVVGSPAELQAEVAGWPRKSTGNNASAKNDLALAA*
Ga0066687_106499621	3300005454	Soil	DIRGRPGFDVVGSPAELQAEVAGWPRKSTGKKASAKNDLALAA*
Ga0070663_1017871381	3300005455	Corn Rhizosphere	HTGATGLDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0070681_102195151	3300005458	Corn Rhizosphere	RPGIDVVDSPVEQRAEVAGRPRKTTGTNASAKNDLALAA*
Ga0073909_100082874	3300005526	Surface Soil	VVDSPAELQAEVAGWPRKSTGKTVRAKNNLALAA*
Ga0066692_104068202	3300005555	Soil	VVGSPAELQAEVAGWPRKSTGKQASAKNDLALAA*
Ga0066699_112703373	3300005561	Soil	IRGRHGFDVVGSPGELQAEVSGGLQNNRKNNASAENNLALAA*
Ga0068855_1013812292	3300005563	Corn Rhizosphere	PGIDVVDSPVEQRAEVAGRPRKTTGTNASAKNDLALAA*
Ga0066705_100807654	3300005569	Soil	VVDSPAELQAEVAGWPRKSTGTNASAKQNLALAA*
Ga0066708_104703142	3300005576	Soil	HTYGGDLVDVVGSPAELQAEVAGWPRKSTGKQSKCEDNLALAA*
Ga0066708_106055302	3300005576	Soil	DIRGRPGFDVVGSPAELQAEVAGWPRKSTGKNASANDKLALAA*
Ga0066654_107811161	3300005587	Soil	DIRGRPGFDVVDSPAELQAEVAGRPRKTTGNNASAKNELALAA*
Ga0066903_1004262811	3300005764	Tropical Forest Soil	VVGSPAELQAEVAGWPRKSTGKHVSAKNDLALAA*
Ga0066903_1015863231	3300005764	Tropical Forest Soil	LDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0066903_1055679892	3300005764	Tropical Forest Soil	DIRGRPGFDVVGSPAELRAEVAGWPRKSTGNNASAKNDLALAA*
Ga0068862_1021760791	3300005844	Switchgrass Rhizosphere	HNIRGRPGFDVVGSPVELQAEVPGRPRKTTGKRTNAKNELAIAA*
Ga0081539_100279514	3300005985	Tabebuia Heterophylla Rhizosphere	VVGSPAELQAEVAGWPRKSTGNKASAKNDLALAA*
Ga0066652_1017304481	3300006046	Soil	MQLDIRGRPGFDVVGSPAELQAEVAGWPRKSTGKNASANDKL
Ga0074047_100184061	3300006576	Soil	RPGFDVVGSPAEQRAEVAGWPRKSTGTKASANKNELALAA*
Ga0075520_11488461	3300006795	Arctic Peat Soil	GYTVDNTQRGRHGFDVVGSPVELQAEVSGRPRKTTGNNASADHNLALAA*
Ga0066665_109432271	3300006796	Soil	IRGRPGFDVVGSPAELQAEVAGWPRKSTGKQASAKNDLALAA*
Ga0075428_1003921361	3300006844	Populus Rhizosphere	GLDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0075430_1001815514	3300006846	Populus Rhizosphere	GRSGFDGVGSPEELQAEVPGWPRKTTGNNVSADRNELALAA*
Ga0075430_1008593693	3300006846	Populus Rhizosphere	PGLDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0075434_1000321311	3300006871	Populus Rhizosphere	AAKMQLDIRGRPGFDVVGSPAELQAEVAGWPRKSTGKNASANDKLALAA*
Ga0079217_107561333	3300006876	Agricultural Soil	FWGRPGFDVVGSPEELQAEVPGRPRKTTGNNVSADHKLALAA*
Ga0079217_109233861	3300006876	Agricultural Soil	RVRPGSYNSDFWGRSGFDGVGSPEELQAEVPGWPRKTTGNNVSADRNELALAA*
Ga0075426_100323561	3300006903	Populus Rhizosphere	DVVGSPAELQAEVAGWPRKSTGKNASANDKLALAA*
Ga0075424_1009353431	3300006904	Populus Rhizosphere	IRGRPGFDVVDSPAELQAEVAGRPRKTTGTNASAKNDLALAA*
Ga0079219_105825953	3300006954	Agricultural Soil	TYGGDLVDVVGSPAELQAEVAGWPRKSTGKNASANDKLALAA*
Ga0075419_100252423	3300006969	Populus Rhizosphere	VWGRSGFDGVGSPEELQAEVPGWPRKTTGNNVSADRNELALAA*
Ga0111539_124007672	3300009094	Populus Rhizosphere	DVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0111539_128528882	3300009094	Populus Rhizosphere	GYNADAWGRSGFDVVGSPGELQAEVPGWPRKTTGNNASANDELALAA*
Ga0066709_1046674041	3300009137	Grasslands Soil	HIRGRPGFDVVGSPAELQAEVAGWPRKSTGNKASAKNDLALAA*
Ga0114129_101197221	3300009147	Populus Rhizosphere	IRGRPGFDVVGSPAELQAEVAGWPRKSTGNKASAKNDLALAA*
Ga0114129_121734062	3300009147	Populus Rhizosphere	RPGLDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0111538_104660742	3300009156	Populus Rhizosphere	RPGFDVVGSPAELQAEVAGWPRKSTGKNASANDKLALAA*
Ga0105249_129299931	3300009553	Switchgrass Rhizosphere	NIRGRHGFDVVGSPAELQAEVSGRPRKTTGTNASAEHDLALVA*
Ga0105061_10738322	3300009807	Groundwater Sand	GFDGVGSPEELQAEVPGWPRKTTGNKASANKNELALAA*
Ga0105071_10643321	3300009808	Groundwater Sand	GYTLSLWGRSGFDGVGSPEELQAEVPGWPRKTTGNKASANKNELALAA*
Ga0105062_11294702	3300009817	Groundwater Sand	FNPWGRSGFDGVGSPEELQAEVPGRPRKTTGNKASANKNELVLAA*
Ga0105087_10856402	3300009819	Groundwater Sand	AILSVIWGRSGFDGVGSPEELQAEVPGWPRKTTGNKASANKNELALAA*
Ga0127425_1062991	3300010060	Grasslands Soil	GFDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0127463_10404762	3300010098	Grasslands Soil	DVVDSPAELQAEVPGRPPKTTGTNASANNNLALAA*
Ga0127446_10188402	3300010104	Grasslands Soil	FDVVGSPEELQAEVPGRPRKTTGNNASADNKLALAA*
Ga0134125_111364711	3300010371	Terrestrial Soil	GIDVVDSPVEQRAEVAGRPRKTTGTNASAKNDLALAA*
Ga0126383_121109862	3300010398	Tropical Forest Soil	DIRGRPGFDVVGSPAELQAEVAGWPRKSTGNKASAKNDLALAA*
Ga0134123_120905561	3300010403	Terrestrial Soil	VVDSPVEQRAEVAGRPRKTTGTNASAKNDLALAA*
Ga0137379_117657721	3300012209	Vadose Zone Soil	PGFDVVGSPAELQAEVAGWPRKSTGNNASAKNDLALAA*
Ga0137377_109882382	3300012211	Vadose Zone Soil	RGRPGFDVVGSPAELQAEVAGWPRKSTGKQASAKNDLALAA*
Ga0134029_11079121	3300012377	Grasslands Soil	RPGFDVVGSPAELQAEVAGWPRKSTGKQASAKNDLALAA*
Ga0134056_12482861	3300012397	Grasslands Soil	GFDVVGSPAELQAEVSGRPPKTTGTNASAKNDLALAA*
Ga0134024_10686251	3300012404	Grasslands Soil	FDVVGSPAELRAEVAGWPRKSTGNNASAKNDLALAA*
Ga0163163_132555581	3300014325	Switchgrass Rhizosphere	DVVGSPEELQAEVPGRPRKTTGNKASAKNDLALAA*
Ga0182001_100961951	3300014488	Soil	DVVGSPEELQAEVPGRPRKTTGNNASAKNDLALAA*
Ga0182008_103377522	3300014497	Rhizosphere	FDVVGSPEELQAEVPGRPRKTTGNKASAKNDLALAA*
Ga0134085_104383051	3300015359	Grasslands Soil	FWLWGRSGFDVVGSPEELQAEVPGRPRKTTGNNASADNKLALAA*
Ga0132258_102739831	3300015371	Arabidopsis Rhizosphere	ADIRGRPGFDVVGSPAELQAEVAGWPRKSTGNKASAKNDLALAA*
Ga0132258_108907161	3300015371	Arabidopsis Rhizosphere	PGLDVVGSPVEQRAEVAGRPRKTTGTNASAKNDLALAA*
Ga0132258_128505861	3300015371	Arabidopsis Rhizosphere	VVGSPAELRAEVAGWPRKSTGNNASAKNDLALAA*
Ga0182037_106392232	3300016404	Soil	PGFDVVGSPAELRAEVAGWPRKSTGTTASANKNELALAA
Ga0187785_101326172	3300017947	Tropical Peatland	DVVGSPAELRAEVAGWPRKSTGNNASAKNDLALAA
Ga0184608_103986461	3300018028	Groundwater Sediment	PGFDVVGSPAELQAEVSGRPPKTTGTNASADNELALAA
Ga0187765_101811693	3300018060	Tropical Peatland	FDVVGSPAELRAEVAGWPRKSTGNNASAKNDLALAA
Ga0184624_100687112	3300018073	Groundwater Sediment	GFDVVGSPEELQAEVPGRPRKSTGKQINAKNDLAIAA
Ga0190265_105834251	3300018422	Soil	GLDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA
Ga0190265_114613403	3300018422	Soil	GYTFSLWGRSGFDGVGSPEELQAEVPGRPRKTTGNNVSADRDNLALAA
Ga0066667_111488552	3300018433	Grasslands Soil	IRGRPGFDVVGSPAELQAEVAGWPRKSTGKQASAKNDLALAA
Ga0190268_117434412	3300018466	Soil	FDVVDSPAEQRAEVAGRPRKTTGKKASAKNDLALAA
Ga0184648_12631791	3300019249	Groundwater Sediment	SGLDVVGSPAELRAEVAGWPRKSTGTKASANKNQLALAA
Ga0173482_103982661	3300019361	Soil	RPGFDVVGSPAELQAEVAGWPRKSTGKNASANDKLALAA
Ga0193745_10961451	3300020059	Soil	RRYNSRNIRGRSGFDVVDSPAELQAEVAGWPRKSTGKTVRAKNNLALAA
Ga0197907_101587161	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	HGFDVVGSPVELQAEVSGRPRKTTGNNASAENNLALAA
Ga0206349_17239161	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	DVVDSPVEQRAEVAGRPRKTTGTNASAKNDLALAA
Ga0209640_100264001	3300025324	Soil	GLDVVGSPAELRAEVAGWPRKSTGTKASANKNDLALAA
Ga0210115_10413521	3300025791	Natural And Restored Wetlands	WRPGFDVVGSPEELQAEVPGRPRKTTGNNASAKNDLALAA
Ga0207709_109174172	3300025935	Miscanthus Rhizosphere	DVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA
Ga0207674_107541581	3300026116	Corn Rhizosphere	WGRPGFDVVGSPEELQAEVPGRPRKTTGNNASAKNDLALAA
Ga0209848_10796311	3300026221	Permafrost Soil	QQENIGGRHGFDVVGSPDELQAEVSGRPRKTTGTNASADHNLALAA
Ga0256867_103442341	3300026535	Soil	PPPGYTFKLWGRSGFDGVGSPEELQAEVPGWPRKTTGNNASADRNELALAA
Ga0209474_102369583	3300026550	Soil	HNIRGRPGFDVVGSPAELQAEVAGWPRKSTGNKASAKNDLALAA
Ga0209861_10617071	3300027332	Groundwater Sand	RLYFDAWGRSGLDGVGSPEELQAEVPGRPRKTTGNNVSADRNELALAA
Ga0214469_10892372	3300027636	Soil	TFRLWGRSGFDGVGSPEELQAEVPGWPRKTTGNNASADRNELALAA
Ga0207428_110001091	3300027907	Populus Rhizosphere	RGRPGFDVVGSPVEQRAEVAGRPRKSTGTKASAKNDLALAA
Ga0209853_10295763	3300027961	Groundwater Sand	GYTLSLWGRSGFDGVGSPEELQAEVPGRPRKTTGNNASAKPNELALAA
Ga0307298_100762311	3300028717	Soil	MLDALTHIRGRSGFDVVGSPVELRAEVAGWPRKSTGTKASANKNELALAA
Ga0307280_100052941	3300028768	Soil	GRSGFDVVDSPAELQAEVAGWPRKSTGKTVRAKNNLALAA
Ga0307323_101233523	3300028787	Soil	VYNFKFWGRSGFDVVGSPEELQAEVPGRPRKTTGNNASADNKLALAA
Ga0307296_103297202	3300028819	Soil	MLVALTHIRGRSGFDVVGSPAELRAEVAGWPRKSTGTKASANKNELAL
Ga0247627_103544491	3300030635	Soil	SEIDIRGRPGLDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA
Ga0308154_1046301	3300030986	Soil	FDVVGSPEELQAEVPGRPRKTTGNNASADNKLALAA
Ga0308190_11611681	3300030993	Soil	GFDVVGSPDELQAEVPGRPRKTTGNNASAKNDLALAA
Ga0308201_103818601	3300031091	Soil	GLVVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA
Ga0314824_1040961	3300031491	Soil	FDVVGSPAELQAEVPGRPRKTTGTNASAKNELALAA
Ga0310887_109507961	3300031547	Soil	RPGSYDSGVWGRSGFDGVGSPEELQAEVPGWPRKTTGNNVSADRNELALAA
Ga0310813_120391201	3300031716	Soil	GFDVVGSPAELQAEVAGWPRKSTGKHVSAKNDLALAA
Ga0310893_102020251	3300031892	Soil	PGLDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA
Ga0314801_175513_1_117	3300034676	Soil	PGFDVVGSPVELQAEVPGRPRKTTGKRTNAKNELAIAA

Hidden Markov Model


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