Metagenome Family F079942

Overview

Basic Information

• Family ID: F079942
• Family Type: Metagenome
• Number of Sequences: 115
• Average Sequence Length: 50 residues
• Representative Sequence: MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE
• Number of Associated Samples: 85
• Number of Associated Scaffolds: 115

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 90.99 %
• % of genes near scaffold ends (potentially truncated): 24.35 %
• % of genes from short scaffolds (< 2000 bps): 87.83 %
• Associated GOLD sequencing projects: 75
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (52.174 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (26.956 % of family members)
• Environment Ontology (ENVO): Unclassified (53.043 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (82.609 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 40.00%
  Coil/Unstructured: 60.00%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF11284	DUF3085	8.70
PF10926	DUF2800	1.74

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
All Organisms	root	All Organisms	47.83 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
cellular organisms	root	All Organisms → cellular organisms	36.52 %
Viruses	superkingdom	All Organisms → Viruses	11.30 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	3.48 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	3.48 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.48 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.96 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	3.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.61 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	1.74 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.87 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	5.22 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3.48 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.74 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.74 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.87 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.87 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	5.22 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3.48 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	2.61 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.74 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	1.74 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.74 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.87 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.87 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.87 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Thauera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera	5.22 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3.48 %
Natronocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella	2.61 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.74 %
Hydrogenophaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga	1.74 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.74 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	0.87 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.87 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	0.87 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
unclassified Thauera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera	5.22 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3.48 %
Natronocella acetinitrilica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella → Natronocella acetinitrilica	2.61 %
Hydrogenophaga aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	1.74 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.74 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.74 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.87 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	0.87 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.87 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Thauera sp. 27	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	5.22 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3.48 %
Natronocella acetinitrilica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella → Natronocella acetinitrilica	2.61 %
Hydrogenophaga aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	1.74 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.74 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.74 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	0.87 %
Maribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter	0.87 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.87 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Thauera sp. 27	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	5.22 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3.48 %
Natronocella acetinitrilica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella → Natronocella acetinitrilica	2.61 %
Hydrogenophaga aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	1.74 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.74 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.74 %
unclassified Maribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter	0.87 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	0.87 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.87 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.17 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	8.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Thauera sp. 27	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	5.22 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3.48 %
Natronocella acetinitrilica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella → Natronocella acetinitrilica	2.61 %
Hydrogenophaga aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	1.74 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1.74 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.74 %
Maribacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	0.87 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	0.87 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	0.87 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000116|DelMOSpr2010_c10128749	Not Available	901
3300000116|DelMOSpr2010_c10215724	Not Available	605
3300000947|BBAY92_10088208	All Organisms → cellular organisms → Bacteria	828
3300001460|JGI24003J15210_10154384	Not Available	583
3300001460|JGI24003J15210_10169257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella → Natronocella acetinitrilica	540
3300001472|JGI24004J15324_10145177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella → Natronocella acetinitrilica	554
3300001748|JGI11772J19994_1048107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	509
3300005512|Ga0074648_1059949	All Organisms → cellular organisms → Bacteria → Proteobacteria	1570
3300005512|Ga0074648_1086259	All Organisms → cellular organisms → Bacteria	1156
3300005613|Ga0074649_1040109	Not Available	2179
3300006025|Ga0075474_10040266	Not Available	1609
3300006025|Ga0075474_10080855	All Organisms → cellular organisms → Bacteria	1065
3300006025|Ga0075474_10154807	Not Available	718
3300006026|Ga0075478_10083333	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1028
3300006026|Ga0075478_10175377	Not Available	661
3300006027|Ga0075462_10045111	All Organisms → cellular organisms → Bacteria → FCB group	1406
3300006735|Ga0098038_1141653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	805
3300006810|Ga0070754_10456069	Not Available	554
3300006920|Ga0070748_1054777	All Organisms → Viruses → Predicted Viral	1577
3300006920|Ga0070748_1372439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	501
3300007234|Ga0075460_10179501	All Organisms → cellular organisms → Bacteria	727
3300007234|Ga0075460_10230608	Not Available	622
3300007234|Ga0075460_10251851	Not Available	588
3300007276|Ga0070747_1327129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Natronocella → Natronocella acetinitrilica	525
3300007538|Ga0099851_1114685	Not Available	1020
3300007539|Ga0099849_1285082	All Organisms → cellular organisms → Bacteria → Proteobacteria	599
3300007540|Ga0099847_1092983	Not Available	922
3300007540|Ga0099847_1110813	Not Available	831
3300007725|Ga0102951_1038747	All Organisms → Viruses → Predicted Viral	1436
3300007778|Ga0102954_1011083	Not Available	2529
3300008012|Ga0075480_10324296	Not Available	775
3300009000|Ga0102960_1047941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1575
3300009000|Ga0102960_1086717	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1143
3300009000|Ga0102960_1310959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	556
3300009001|Ga0102963_1250839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	700
3300009074|Ga0115549_1013523	Not Available	3462
3300009149|Ga0114918_10348653	Not Available	817
3300009193|Ga0115551_1382431	Not Available	607
3300009472|Ga0115554_1160639	Not Available	926
3300010296|Ga0129348_1274650	Not Available	564
3300010297|Ga0129345_1118550	All Organisms → cellular organisms → Bacteria → Proteobacteria	971
3300010300|Ga0129351_1188358	All Organisms → cellular organisms → Bacteria	804
3300010300|Ga0129351_1380210	Not Available	528
3300010316|Ga0136655_1219096	Not Available	566
3300010368|Ga0129324_10140871	All Organisms → Viruses → Predicted Viral	1011
3300013010|Ga0129327_10274785	Not Available	866
3300013010|Ga0129327_10914827	Not Available	504
3300017697|Ga0180120_10235159	Not Available	749
3300017742|Ga0181399_1133190	Not Available	603
3300017769|Ga0187221_1203970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	569
3300017824|Ga0181552_10388039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	671
3300017950|Ga0181607_10205008	All Organisms → Viruses → Predicted Viral	1157
3300017950|Ga0181607_10254211	Not Available	1007
3300017963|Ga0180437_10344423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1124
3300017971|Ga0180438_10678322	Not Available	758
3300018036|Ga0181600_10367605	Not Available	705
3300018080|Ga0180433_10383701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	1088
3300018415|Ga0181559_10479957	Not Available	677
3300018416|Ga0181553_10135969	Not Available	1478
3300018417|Ga0181558_10228709	All Organisms → Viruses → Predicted Viral	1049
3300018417|Ga0181558_10334854	Not Available	817
3300018417|Ga0181558_10677253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	526
3300018420|Ga0181563_10171290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1347
3300018420|Ga0181563_10250959	All Organisms → Viruses → Predicted Viral	1054
3300018876|Ga0181564_10412648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	734
3300019459|Ga0181562_10192726	All Organisms → Viruses → Predicted Viral	1074
3300020174|Ga0181603_10321880	Not Available	589
3300021365|Ga0206123_10020477	Not Available	3950
3300021957|Ga0222717_10026600	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	3842
3300021958|Ga0222718_10018451	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	4905
3300021958|Ga0222718_10029694	All Organisms → cellular organisms → Bacteria	3671
3300021958|Ga0222718_10042992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	2924
3300021958|Ga0222718_10330868	Not Available	781
3300021958|Ga0222718_10476517	Not Available	608
3300021958|Ga0222718_10587436	Not Available	524
3300021958|Ga0222718_10590556	Not Available	522
3300021960|Ga0222715_10455620	Not Available	687
3300021960|Ga0222715_10575711	All Organisms → cellular organisms → Bacteria	585
3300021964|Ga0222719_10165367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1546
3300021964|Ga0222719_10476656	Not Available	755
3300021964|Ga0222719_10522569	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	707
3300022065|Ga0212024_1015057	Not Available	1209
3300022065|Ga0212024_1026381	Not Available	972
3300022068|Ga0212021_1059304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	781
3300022187|Ga0196899_1118031	Not Available	767
3300022923|Ga0255783_10405068	Not Available	510
3300022925|Ga0255773_10105267	All Organisms → Viruses → Predicted Viral	1473
3300022927|Ga0255769_10303768	Not Available	646
3300022928|Ga0255758_10276386	Not Available	728
3300022928|Ga0255758_10366735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Thauera → unclassified Thauera → Thauera sp. 27	585
3300022928|Ga0255758_10401236	Not Available	545
3300025098|Ga0208434_1089971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Hydrogenophaga → Hydrogenophaga aromaticivorans	614
3300025137|Ga0209336_10138856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	651
3300025543|Ga0208303_1014388	All Organisms → Viruses → Predicted Viral	2362
3300025577|Ga0209304_1132740	Not Available	530
3300025646|Ga0208161_1015235	All Organisms → cellular organisms → Bacteria	3029
3300025653|Ga0208428_1151767	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	620
3300025671|Ga0208898_1044284	Not Available	1673
3300025684|Ga0209652_1113140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	764
3300025695|Ga0209653_1154283	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	672
3300025759|Ga0208899_1108017	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024
3300025806|Ga0208545_1073006	Not Available	953
3300025840|Ga0208917_1240560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585
3300025879|Ga0209555_10178686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	867
3300025889|Ga0208644_1203963	Not Available	856
3300025892|Ga0209630_10179713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1047
3300026125|Ga0209962_1009553	Not Available	1845
3300026138|Ga0209951_1131402	Not Available	503
3300026187|Ga0209929_1024950	Not Available	1834
(restricted) 3300027837|Ga0255041_10177365	Not Available	743
3300027917|Ga0209536_100649150	Not Available	1312

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.13%
Algae	Host-Associated → Algae	0.87%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	85.22%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	13.91%
Green Algae	Host-Associated → Algae → Green Algae	0.87%

Type

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	34.78%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	21.74%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.30%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	11.30%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.96%
Pelagic	Environmental → Aquatic → Marine → Pelagic	5.22%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.61%
Strait	Environmental → Aquatic → Marine → Strait	2.61%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	2.61%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	0.87%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	34.78%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	19.13%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.30%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	7.83%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.61%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	2.61%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	2.61%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.74%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.87%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	0.87%

Habitat

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	26.96%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	19.13%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	11.30%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.83%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.22%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	5.22%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.35%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.61%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.61%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	2.61%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	2.61%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	2.61%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.74%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.87%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.87%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.87%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.87%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.87%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	0.87%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental
3300017971	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaG	Environmental
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental
3300022928	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG	Environmental
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental
3300025577	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)	Environmental
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental
3300025684	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)	Environmental
3300025695	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNA (SPAdes)	Environmental
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental
3300025879	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNA (SPAdes)	Environmental
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental
3300026125	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG (SPAdes)	Environmental
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental
3300027837 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3	Environmental
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_101287492	3300000116	Marine	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLKIKESNNE*
DelMOSpr2010_102157241	3300000116	Marine	MSRVYVVIDEFHGIIDDINVYKNKPKNLKTISEDEKQRCFVLEIKEGE*
BBAY92_100882082	3300000947	Macroalgal Surface	MTKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFTLEIKEDAE*
JGI24003J15210_101543841	3300001460	Marine	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFEMEIK
JGI24003J15210_101692573	3300001460	Marine	EFYGTIADVNVYKNEPKNLKTISEDEGQRCFELEIKDSNNE*
JGI24004J15324_101451773	3300001472	Marine	VYVVVDEFYGTIADVNVYKNEPKNLKTISEDEGQRCFELEIKDSNNE*
JGI11772J19994_10481073	3300001748	Saline Water And Sediment	MNKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE*
Ga0074648_10599493	3300005512	Saline Water And Sediment	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE*
Ga0074648_10862592	3300005512	Saline Water And Sediment	MAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAE*
Ga0074649_10401095	3300005613	Saline Water And Sediment	MSIVYVVIDEFHGIIDDINVYKNKPKNLKTISEDEKQRCFTLEIKESNNE*
Ga0075474_100402663	3300006025	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKESNNE*
Ga0075474_100808553	3300006025	Aqueous	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE*
Ga0075474_101548073	3300006025	Aqueous	MTKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAE*
Ga0075478_100833334	3300006026	Aqueous	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE*RNDNDLAKLLRMSKM*
Ga0075478_101753773	3300006026	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLKIKESNNE*
Ga0075462_100451114	3300006027	Aqueous	MSRVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKESNNE*
Ga0098038_11416533	3300006735	Marine	MSMVYVVIDEFNGIIDDVNVYKNKPKNLKTISEDEKQRCFTLEIKESNNE*
Ga0070754_104560693	3300006810	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLKIKENNNE*
Ga0075479_102859753	3300006870	Aqueous	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDENQRCFELEIKDSNDE*RNDNDLAKLLRMSKM*
Ga0070748_10547776	3300006920	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLEIKENEDE*
Ga0070748_13724393	3300006920	Aqueous	MAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKDSNDE*
Ga0075460_101795011	3300007234	Aqueous	MSKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELE
Ga0075460_102306083	3300007234	Aqueous	MMAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAE*
Ga0075460_102518514	3300007234	Aqueous	DEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKENQDDT*
Ga0070747_13271292	3300007276	Aqueous	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISQDESQRCFELEIKDSNDE*
Ga0099851_11146853	3300007538	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLEIKESNNE*
Ga0099849_12850822	3300007539	Aqueous	MTKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKEDAE*
Ga0099847_10929834	3300007540	Aqueous	MSKVYVVVDEFYGTIADVNVYRNKPKNLKTISEDESQRCFELEIMENENE*
Ga0099847_11108134	3300007540	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLEIKETEDERM*
Ga0102951_10387471	3300007725	Water	MRMNKVYVVVDEFYGTISDVNVYKNEPKNLKTISEDESQRCFELEIKESNNE*
Ga0102954_10110832	3300007778	Water	MRMNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKGEKNENI*
Ga0075480_103242963	3300008012	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKENEDE*
Ga0102960_10479412	3300009000	Pond Water	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDEGQRCFELEIKDSNNE*
Ga0102960_10867172	3300009000	Pond Water	MRMNKVYVVVDEFYGTISDVNVYKNEPKNLKTISEDESQRCFELEIKGEKNENI*
Ga0102960_13109592	3300009000	Pond Water	MNKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE*
Ga0102963_12508392	3300009001	Pond Water	MNKVYVVVDEFYGTISDVNVYKNEPKNLKTISEDESQRCFELEIKESNNE*
Ga0115549_10135236	3300009074	Pelagic Marine	MMDKVYVVIDEFYGIIDDVNVYKNKPKNLKKISEDEKQRCFILEIKEGE*
Ga0114918_103486533	3300009149	Deep Subsurface	MSKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDEKQRCFELEIKDSNNE*
Ga0115551_13824313	3300009193	Pelagic Marine	MNKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCLELEIKDSNDE*
Ga0115554_11606395	3300009472	Pelagic Marine	MNKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDEKQRCFELEIKETEDDS*
Ga0129348_12746501	3300010296	Freshwater To Marine Saline Gradient	MSKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKENENE*
Ga0129345_11185502	3300010297	Freshwater To Marine Saline Gradient	MMAKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKEDAE*
Ga0129351_11883584	3300010300	Freshwater To Marine Saline Gradient	MTKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKENEDES*
Ga0129351_13802102	3300010300	Freshwater To Marine Saline Gradient	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKEDAE*
Ga0136655_12190964	3300010316	Freshwater To Marine Saline Gradient	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEI
Ga0129324_101408714	3300010368	Freshwater To Marine Saline Gradient	VSIVYVVIDEFHGIIDDINVYKNKPKNLKTTSEDEKQRCFTLKIKESNNE*
Ga0129327_102747855	3300013010	Freshwater To Marine Saline Gradient	MSKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKE
Ga0129327_109148271	3300013010	Freshwater To Marine Saline Gradient	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLKIKETEDERM*
Ga0180120_102351592	3300017697	Freshwater To Marine Saline Gradient	MSKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFKLEIKENENE
Ga0181399_11331903	3300017742	Seawater	MSIIYVVIDEFHGIIDDVNVYKNKPKNLKTISEDERQRCFTLEIKESTNEXTNSNDLAEL
Ga0187221_12039701	3300017769	Seawater	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDEGERCFELEIQDNKEM
Ga0181552_103880392	3300017824	Salt Marsh	DEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE
Ga0181607_102050084	3300017950	Salt Marsh	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKESNNE
Ga0181607_102542113	3300017950	Salt Marsh	MSIVYVVIDEFHGIIDDINVYKNKPKNLKTISEDEKQRCFTLEIKESNNE
Ga0180437_103444235	3300017963	Hypersaline Lake Sediment	MAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAE
Ga0180438_106783222	3300017971	Hypersaline Lake Sediment	MSKVYVVVDEFYGTIDDINVYRNKPKNLKTISEDESQRCFELEIKENENE
Ga0181600_103676051	3300018036	Salt Marsh	VYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKESNNE
Ga0180433_103837013	3300018080	Hypersaline Lake Sediment	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE
Ga0181559_104799572	3300018415	Salt Marsh	MAKVYVVVDEFYGTIADVNVYKNEPKNLKKISEDESQRCFELEIKEDAK
Ga0181553_101359694	3300018416	Salt Marsh	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKENENE
Ga0181558_102287093	3300018417	Salt Marsh	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTINEDESQRCFELEIKENENE
Ga0181558_103348545	3300018417	Salt Marsh	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIK
Ga0181558_106772531	3300018417	Salt Marsh	IDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE
Ga0181563_101712904	3300018420	Salt Marsh	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKENEDDS
Ga0181563_102509596	3300018420	Salt Marsh	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKENEN
Ga0181564_104126482	3300018876	Salt Marsh	MAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAK
Ga0181562_101927266	3300019459	Salt Marsh	MSKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFE
Ga0181555_10751597	3300020051	Salt Marsh	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDEXRNDNDLAKLLRMSKM
Ga0181603_103218802	3300020174	Salt Marsh	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKESNNEXTNSNDLA
Ga0206123_100204776	3300021365	Seawater	MDKVYVVIDEFYGIIDDVNVYKNKPKNLKKISEDEKQRCFILEIKEGE
Ga0222717_100266003	3300021957	Estuarine Water	MSIIYVVIDEFHGIIDDVNVYKNKPKNLKTISEDERQRCFTLEIKESTNE
Ga0222718_100184515	3300021958	Estuarine Water	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLKIKESNNE
Ga0222718_100296942	3300021958	Estuarine Water	MSIVYVVIDEFHGIIDDINVYRNKPKNLKAISEDEKQRCFTLEIKESNNE
Ga0222718_1004299213	3300021958	Estuarine Water	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKENEDED
Ga0222718_103308683	3300021958	Estuarine Water	MNKVYVVVDEFYGTIADINVYRNKPKNLKTISEDEKQRCFELEIKENNDE
Ga0222718_104765172	3300021958	Estuarine Water	MNKVYVVVDEFYGTISDVNVYKNEPKNLKTISEDESQRCFELEIKGEKNENI
Ga0222718_105874362	3300021958	Estuarine Water	MAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEAAE
Ga0222718_105905562	3300021958	Estuarine Water	MNKVYVVVDEFYGTISNVNVYKNEPKNLKTISEDEGQRCFELEIKESNNE
Ga0222715_104556203	3300021960	Estuarine Water	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDEKQRCFELEIKDSNNE
Ga0222715_105757111	3300021960	Estuarine Water	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAE
Ga0222719_101653675	3300021964	Estuarine Water	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDKSQRCFELEIKENEDED
Ga0222719_104766563	3300021964	Estuarine Water	MNKVYVVVDEFYGTIADVNVYKNEPKNLKIISEDEGQRCFELEIKESNNE
Ga0222719_105225694	3300021964	Estuarine Water	MNKVYVVVDEFYGTISDVNVYKNEPKNLKTISEDESQRCFELEIKG
Ga0212024_10150575	3300022065	Aqueous	MSRVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKESNNE
Ga0212024_10263813	3300022065	Aqueous	MSRVYVVIDEFHGIIDDINVYKNKPKNLKTISEDEKQRCFVLEIKEGE
Ga0212021_10593042	3300022068	Aqueous	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE
Ga0196899_11180312	3300022187	Aqueous	MTKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAE
Ga0255765_10719901	3300022921	Salt Marsh	MSIVYVVIDEFHGIIDDINVYKNKPKNLKTISEDEKQRCFTLEIKESNNEXTNSNDLAKPLRMSKMRI
Ga0255783_104050681	3300022923	Salt Marsh	MAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQ
Ga0255773_101052678	3300022925	Salt Marsh	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCF
Ga0255769_103037681	3300022927	Salt Marsh	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQ
Ga0255758_102763864	3300022928	Salt Marsh	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSND
Ga0255758_103667351	3300022928	Salt Marsh	KMSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE
Ga0255758_104012363	3300022928	Salt Marsh	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKENENE
Ga0208434_10899711	3300025098	Marine	MSMVYVVIDEFNGIIDDVNVYKNKPKNLKTISEDEKQRCFTLEIKESNNE
Ga0209336_101388561	3300025137	Marine	VYVVVDEFYGTIADVNVYKNEPKNLKTISEDEGQRCFELEIKDSNNE
Ga0208303_101438810	3300025543	Aqueous	MSKVYVVVDEFYGTIADVNVYRNKPKNLKTISEDESQRCFELEIMENENE
Ga0209304_11327403	3300025577	Pelagic Marine	MMDKVYVVIDEFYGIIDDVNVYKNKPKNLKKISEDEKQRCFILEIKEGE
Ga0208161_10152356	3300025646	Aqueous	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKENEDE
Ga0208428_11517671	3300025653	Aqueous	MSKVYVVIDEFYGTIADVNVYKNKPKNLKTISEDESQRCV
Ga0208898_10442844	3300025671	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLKIKENNNE
Ga0209652_11131401	3300025684	Marine	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDEXRNDNDLAKL
Ga0209653_11542834	3300025695	Marine	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQ
Ga0208899_11080173	3300025759	Aqueous	MSKVYVVVDEFYGTIADVNVYKNKPKNIKTISEDESQRCFELEIKDSNDE
Ga0208545_10730065	3300025806	Aqueous	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLEI
Ga0209193_11575162	3300025816	Pelagic Marine	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDEXRNDNDLAKLLRMSKM
Ga0208917_12405602	3300025840	Aqueous	MMAKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKEDAE
Ga0209555_101786862	3300025879	Marine	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKENEDED
Ga0208644_12039635	3300025889	Aqueous	MSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQR
Ga0209630_101797131	3300025892	Pelagic Marine	KMSKVYVVVDEFYGTIADVNVYKNKPKNLKTISEDESQRCFELEIKDSNDE
Ga0209962_10095532	3300026125	Water	MNKVYVVVDEFYGTIADVNVYKNEPKNLKTISEDESQRCFELEIKGEKNENI
Ga0209951_11314021	3300026138	Pond Water	MNKVYVVVDEFYGTISDVNVYKNEPKNLKTISEDESQRCFELEIKESNNE
Ga0209929_10249503	3300026187	Pond Water	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTISEDEKQRCFTLEIKESNNEXTNNNDLA
(restricted) Ga0255041_101773651	3300027837	Seawater	VIDEFHGIIDDINVYKNKPKNLKTISEDEKQRCFTLEIKESNNE
Ga0209536_1006491503	3300027917	Marine Sediment	MSIVYVVIDEFHGIIDDINVYRNKPKNLKTTSEDEKQRCFTLEIKESNNE