NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F079923

Metagenome Family F079923

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079923
Family Type Metagenome
Number of Sequences 115
Average Sequence Length 53 residues
Representative Sequence VLRLFVLVLYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Number of Associated Samples 109
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 2.65 %
% of genes near scaffold ends (potentially truncated) 93.04 %
% of genes from short scaffolds (< 2000 bps) 86.96 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (98.261 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(23.478 % of family members)
Environment Ontology (ENVO) Unclassified
(32.174 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.957 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 87.23%    β-sheet: 0.00%    Coil/Unstructured: 12.77%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00119ATP-synt_A 73.04
PF00137ATP-synt_C 6.96
PF00430ATP-synt_B 6.09
PF02321OEP 0.87
PF09527ATPase_gene1 0.87
PF12704MacB_PCD 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0356FoF1-type ATP synthase, membrane subunit aEnergy production and conversion [C] 73.04
COG0636FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit KEnergy production and conversion [C] 6.96
COG0711FoF1-type ATP synthase, membrane subunit b or b'Energy production and conversion [C] 6.09
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.74


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.26 %
UnclassifiedrootN/A1.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000891|JGI10214J12806_10871040All Organisms → cellular organisms → Bacteria1153Open in IMG/M
3300001324|A2635W6_104518All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300001661|JGI12053J15887_10582787All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300004114|Ga0062593_102650508All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300004153|Ga0063455_100398689All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300004156|Ga0062589_100133720All Organisms → cellular organisms → Bacteria1664Open in IMG/M
3300005174|Ga0066680_10822822All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300005295|Ga0065707_10798310All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300005355|Ga0070671_101214501All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300005356|Ga0070674_102022875All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005440|Ga0070705_100868740All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300005535|Ga0070684_100313653All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300005545|Ga0070695_100007078All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis6647Open in IMG/M
3300005556|Ga0066707_10017170All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3754Open in IMG/M
3300005563|Ga0068855_100047837All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5052Open in IMG/M
3300005574|Ga0066694_10376360All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300005576|Ga0066708_10914661All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005843|Ga0068860_102330799All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300005937|Ga0081455_10719593All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005938|Ga0066795_10118160All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300006046|Ga0066652_101755825All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300006755|Ga0079222_10048521All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1956Open in IMG/M
3300006797|Ga0066659_11334191All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300006806|Ga0079220_10459384All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300006854|Ga0075425_100343076All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1720Open in IMG/M
3300006894|Ga0079215_11369607All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300007076|Ga0075435_101646027All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300007820|Ga0104324_115839All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300009012|Ga0066710_101463452All Organisms → cellular organisms → Bacteria1056Open in IMG/M
3300009143|Ga0099792_10365046All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300010321|Ga0134067_10138994All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300010375|Ga0105239_11658133All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300010375|Ga0105239_13592419All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010403|Ga0134123_12621866All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300011996|Ga0120156_1000370All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae17083Open in IMG/M
3300012019|Ga0120139_1166451All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300012189|Ga0137388_10038995All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3769Open in IMG/M
3300012200|Ga0137382_11113526All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012206|Ga0137380_10260170All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1562Open in IMG/M
3300012208|Ga0137376_10405953All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300012212|Ga0150985_116407708All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300012359|Ga0137385_11111900All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300012362|Ga0137361_10979226All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300012509|Ga0157334_1034564All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300012917|Ga0137395_10083637All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2087Open in IMG/M
3300012923|Ga0137359_10972204All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300012924|Ga0137413_10918336All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300012929|Ga0137404_11319738All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300012955|Ga0164298_10078369All Organisms → cellular organisms → Bacteria1686Open in IMG/M
3300012958|Ga0164299_11417932All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300012960|Ga0164301_10129286All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1508Open in IMG/M
3300012961|Ga0164302_10276839All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300012977|Ga0134087_10846536All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300013104|Ga0157370_10711080All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300013296|Ga0157374_12768210All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300013307|Ga0157372_10984448All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300013501|Ga0120154_1111860All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300013503|Ga0120127_10058455All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300013763|Ga0120179_1002858All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis5328Open in IMG/M
3300013772|Ga0120158_10005863All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae12504Open in IMG/M
3300014052|Ga0120109_1049547All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300014052|Ga0120109_1076323All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300014487|Ga0182000_10646478All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300014827|Ga0120171_1074646All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300015080|Ga0167639_1051281All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300018000|Ga0184604_10021543All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1533Open in IMG/M
3300018051|Ga0184620_10208280All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300018066|Ga0184617_1176778All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300018071|Ga0184618_10325225All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300018429|Ga0190272_10220361All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1392Open in IMG/M
3300019868|Ga0193720_1036125All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300019878|Ga0193715_1069790All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300019999|Ga0193718_1092805All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300020002|Ga0193730_1048016All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300020012|Ga0193732_1008598All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1767Open in IMG/M
3300020022|Ga0193733_1007406All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3125Open in IMG/M
3300020022|Ga0193733_1024101All Organisms → cellular organisms → Bacteria1718Open in IMG/M
3300022534|Ga0224452_1021725All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae1794Open in IMG/M
3300022694|Ga0222623_10112483All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300022756|Ga0222622_10297451All Organisms → cellular organisms → Bacteria1109Open in IMG/M
3300025481|Ga0208079_1077169All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300025898|Ga0207692_10056780All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2010Open in IMG/M
3300025898|Ga0207692_10675342All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300025927|Ga0207687_11437227All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300025929|Ga0207664_10312182All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1385Open in IMG/M
3300025944|Ga0207661_10668127All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300025981|Ga0207640_10414718All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300026078|Ga0207702_11263894All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300026300|Ga0209027_1279339All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300026325|Ga0209152_10021037All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2229Open in IMG/M
3300026538|Ga0209056_10080300All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis2754Open in IMG/M
3300026548|Ga0209161_10022679All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis4472Open in IMG/M
3300027546|Ga0208984_1093905All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300027787|Ga0209074_10015931All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1958Open in IMG/M
3300027903|Ga0209488_10817534All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300028768|Ga0307280_10299507All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300028787|Ga0307323_10123328All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300028793|Ga0307299_10354212All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300028799|Ga0307284_10292793All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300028807|Ga0307305_10124255All Organisms → cellular organisms → Bacteria1192Open in IMG/M
3300028807|Ga0307305_10495315All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300028811|Ga0307292_10479423All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300028824|Ga0307310_10237078All Organisms → cellular organisms → Bacteria872Open in IMG/M
3300028824|Ga0307310_10714802All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300028875|Ga0307289_10297717All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300028881|Ga0307277_10498044All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300031164|Ga0307502_10154419All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300031231|Ga0170824_121564922All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300031547|Ga0310887_10469587All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300031740|Ga0307468_100446029All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300034268|Ga0372943_1120222All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300034384|Ga0372946_0591971All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300034820|Ga0373959_0025638All Organisms → cellular organisms → Bacteria1160Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil23.48%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.57%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost8.70%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.48%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.48%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.61%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.74%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.74%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.74%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.87%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.87%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.87%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001324Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A26-35cm)- 6 month illuminaEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007820Permafrost core soil microbial communities from Svalbard, Norway - sample 2-12-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011996Permafrost microbial communities from Nunavut, Canada - A39_65cm_12MEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300013763Permafrost microbial communities from Nunavut, Canada - A15_65cm_0MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014052Permafrost microbial communities from Nunavut, Canada - A23_35cm_12MEnvironmentalOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015080Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300019868Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025481Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028811Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300031164Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10214J12806_1087104013300000891SoilAGLRFLVLVLYAPIARVMFLSLEAALVSLVTFFFLTMMAEPLLLEYDR*
A2635W6_10451823300001324PermafrostLLIRWGIGAGMRLLVLVLYAPLARVMFLSLDAALVSLVTFFFMTMMAEPLLLEYDR*
JGI12053J15887_1058278713300001661Forest SoilAVMRLLVLVLYAPLARVMFLSLDAALVSLATFFFMTMMAEPLLLEYDR*
Ga0062593_10265050823300004114SoilAGKGAPGELLVRWGIGALMRFAVLILYAPIARILFLSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0063455_10039868913300004153SoilMLRWGIGAVLRFMILVLYAPLARIANFSLDASLVSLVTFFFLTMMAEPLLLEYDR*
Ga0062589_10013372013300004156SoilIGAVFRFFVLVLYAPLARILNVSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0066680_1082282213300005174SoilWAIGAALRLFVLVLYAPLVRIVNLDIESALVSLVTFFFLTMMAEPLLLEYDR*
Ga0065707_1079831013300005295Switchgrass RhizosphereIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0070671_10121450113300005355Switchgrass RhizosphereGEPTGELFIRWALGAGIRLIVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0070674_10202287523300005356Miscanthus RhizosphereRRGHGAPGELLLRWGIGAVFRFFILVLYAPLARILNVSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0070705_10086874023300005440Corn, Switchgrass And Miscanthus RhizosphereGHGAPGELLLRWGIGAVLRLFVLVLYAPLARVINLSIEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0070684_10031365313300005535Corn RhizosphereRPARGSKGAPGALMLRWGVGALMRFVVLVLYAPLARIMFFPLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0070695_10000707883300005545Corn, Switchgrass And Miscanthus RhizosphereQSVPGELLIRWGIGAVVRLLVLVLYAPLARVLFLSLDAALVSVVTFFFLTMMAEPLLLEYDR*
Ga0066707_1001717063300005556SoilLVRIVNLDVESALVSLVTFFFLTMMAEPLLLEYDR*
Ga0068855_10004783713300005563Corn RhizosphereLMRFVVLVLYAPLARVMFLPLDASLVSLVTFFFLTMMAEPLLLEYDR*
Ga0066694_1037636013300005574SoilLLIRWAIGAALRLFVLVLYAPLVRIVNLDVESALVSLVTFFFLTMMAEPLLLEYDR*
Ga0066708_1091466123300005576SoilRPGHGVPGELLIRWAIGAALRLFVLVLYAPLVRIVNLDVESALVSLVTFFFLTMMAEPLLLEYDR*
Ga0068860_10233079923300005843Switchgrass RhizosphereRGHGAPGELLLRWGIGAVFRFFVLVLYAPLARILNVSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0081455_1071959313300005937Tabebuia Heterophylla RhizosphereGAVLRLFVLVLYAPLARIMNISVEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0066795_1011816013300005938SoilVLRLFVLVLYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0066652_10175582523300006046SoilGKGAPGELLLRWGVGAVLRFVVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0079222_1004852113300006755Agricultural SoilGELFIRWALGAGIRLIVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0066659_1133419123300006797SoilRWGLGAVLRLFVLVLYAPLARIINLSVEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0079220_1045938413300006806Agricultural SoilAPLARVVNLSLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0075425_10034307613300006854Populus RhizosphereLRFLVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0079215_1136960713300006894Agricultural SoilAGLRLFVLVLYAPIARIMFLSLEAALVSLVTFFFLTMMAEPLLLAYDR*
Ga0075435_10164602723300007076Populus RhizospherePTGELFIRWGLGAGLRLVVLVLYAPVARIFNVSLEAALVSLVTYFFLTMMAEPLLLEYDR
Ga0104324_11583913300007820SoilYAPLARVMFLSLDAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0066710_10146345233300009012Grasslands SoilLVRIVNLDVESALVSLVTFFFLTMMAEPLLLEYDR
Ga0099792_1036504623300009143Vadose Zone SoilWHGAPGELLIRWGIGAGLRLFVLVLYAPIARIVNISLEAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0134067_1013899413300010321Grasslands SoilLRPARSGHGAPGELLLRWGVGAVLRVFVLVLYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0105239_1165813323300010375Corn RhizosphereGELLIRWALGAGLRLLVLVLYAPLARIGNLSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0105239_1359241913300010375Corn RhizosphereGSKGAPGALLFRWGVGALMRFVVLVLYAPLARVMFLPLDASLVSLVTFFFLTMMAEPLLLEYDR*
Ga0134123_1262186623300010403Terrestrial SoilARPGHGAPGELLLRWGIGAVLRLFVLVLYAPLARVINLSIEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0120156_100037013300011996PermafrostPGELLIRWGIGAVMRLFVLVLYAPLARVMFLSLDAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0120139_116645123300012019PermafrostELLIRWAIGAMLRLFVLVLYAPLARIINLSVEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0137388_1003899563300012189Vadose Zone SoilLRPARPGHGAPGELMLRWGIGAVMRFFVLVLYAPIARIANLSLEAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0137382_1111352613300012200Vadose Zone SoilLARIVNLSLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0137380_1026017033300012206Vadose Zone SoilWGIGAVLRFFVLVLFAPLARIANLSLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0137376_1040595313300012208Vadose Zone SoilGAPGELLLRWGVGAVLRFVVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0150985_11640770823300012212Avena Fatua RhizosphereLARIANFSLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0137385_1111190023300012359Vadose Zone SoilLYAPLARVMFLSLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0137361_1097922623300012362Vadose Zone SoilPGHGAPGELMLRWGIGAVMRFFVLVLYAPIARVVNLSLEAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0157334_103456423300012509SoilILVLYAPLARILNVSLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0137395_1008363713300012917Vadose Zone SoilRFFVLVLYAPIARVVNLSLEAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0137359_1097220423300012923Vadose Zone SoilALLRPARPGHGAPGELLIRWGIGAGLRLFVLVLYAPIARIVNISLEAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0137413_1091833623300012924Vadose Zone SoilRGVPGELLVRWAYGSALRLIVLVLYAPIARIANASLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0137404_1131973823300012929Vadose Zone SoilGHGAPGELLIRWGIGAGLRLFVLVLYAPIARIVNISLEAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0164298_1007836943300012955SoilLVLYAPLARIANISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0164299_1141793223300012958SoilLLIRWAVGAVMRFFVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0164301_1012928633300012960SoilVVLVLYAPLARVMFLSLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0164302_1027683913300012961SoilPRGELLIRWAIGAGQRLFVLGGYAPLARILNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0134087_1084653623300012977Grasslands SoilARIANFSLDAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0157370_1071108023300013104Corn RhizosphereLIRWGIGAVVRLLVLVLYAPLARVLFLSLDAALVSVVTFFFLTMMAEPLLLEYDR*
Ga0157374_1276821023300013296Miscanthus RhizospherePRWLVLVMYAALARVLNVSLDAALVSLVTFFCLTMMAEPLLLEYDR*
Ga0157372_1098444813300013307Corn RhizosphereLVRWAIGAGLRLFVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0120154_111186013300013501PermafrostGRGAPGELLIRWGIGAVMRLFVLVLYAPLARVMFLSLDAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0120127_1005845513300013503PermafrostARIMFLSLDAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0120179_100285873300013763PermafrostVLRLFVLVLYAPLARIINLSVEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0120158_1000586373300013772PermafrostMRLLVLVLYAPLARVMFLSLDAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0120109_104954723300014052PermafrostMPGELLIRWAIGAVLRLFVLVLYAPLARIINLSVEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0120109_107632313300014052PermafrostAPLARVMFLSLDAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0182000_1064647813300014487SoilEGPAGELFIRWGLGAGVRFMVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0120171_107464623300014827PermafrostLYAPLARIINLSVEAALVSLVTFFFLTMMAEPLLLEYDR*
Ga0167639_105128113300015080Glacier Forefield SoilRAGRGKPGELLIRWAIGAVLRLFVLVLYAPLARIINLSVEAALVSLVTFFFMTMMAEPLLLEYDR*
Ga0184604_1002154313300018000Groundwater SedimentRPARPGKGAPGELMIRWAIGAVMRLFVLILYAPLARIVNLSLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0184620_1020828023300018051Groundwater SedimentLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0184617_117677823300018066Groundwater SedimentFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0184618_1032522523300018071Groundwater SedimentFLRPARPGKGAPGELLIRWSIGAVMRLFVLVLYAPLARVMFLSLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0190272_1022036133300018429SoilYAPIARVFFLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0193720_103612513300019868SoilAPGELLIRWAIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0193715_106979023300019878SoilIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0193718_109280523300019999SoilRPARSGKGAPGELLIRWGIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0193730_104801633300020002SoilVLVLYAPIARIANASLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0193732_100859843300020012SoilLVLYAPIARIANASLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0193733_100740613300020022SoilALLRPARPGHGAPGELMLRWGIGAVLRFFVLVLYAPIARIVNLSLEAALVSLVTFFFMTMMAEPLLLEYDR
Ga0193733_102410143300020022SoilYAPIARIANLSLEAALVSLVTFFFMTMMAEPLLLEYDR
Ga0224452_102172513300022534Groundwater SedimentIRWAIGAVLRFFVLVLYAPIARIMFLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0222623_1011248323300022694Groundwater SedimentIARIMFLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0222622_1029745123300022756Groundwater SedimentLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0208079_107716913300025481Arctic Peat SoilVLRLFVLVLYAPLARIINLSVEAALVSLVTFFFMTMMAEPLLLEYDR
Ga0207692_1005678013300025898Corn, Switchgrass And Miscanthus RhizosphereLLRPSRTTGEPTGELFIRWGLGAGLRLVVLVLYAPVARIFNVSLEAALVSLVTYFFLTMMAEPLLLEYDR
Ga0207692_1067534223300025898Corn, Switchgrass And Miscanthus RhizosphereLLRWGVGAVLRFLVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0207687_1143722713300025927Miscanthus RhizosphereIGAVVRLLVLVLYAPLARVLFLSLDAALVSVVTFFFLTMMAEPLLLEYDR
Ga0207664_1031218233300025929Agricultural SoilLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0207661_1066812713300025944Corn RhizosphereVVLVLYAPLARVMFLPLDASLVSLVTFFFLTMMAEPLLLEYDR
Ga0207640_1041471823300025981Corn RhizosphereLVLYAPLARVLFLSLDAALVSVVTFFFLTMMAEPLLLEYDR
Ga0207702_1126389423300026078Corn RhizosphereVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0209027_127933913300026300Grasslands SoilWGVGAVLRFFVLVLFAPLARIVNISIEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0209152_1002103743300026325SoilLLRPARGGRGAPGELLLRWGVGAVLRFFVLVLFAPLARIVNISIEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0209375_125355013300026329SoilGSYALLRPGRPGRGVPGELLIRWAIGAALRLFVLVLYAPLVRIVNLDVESALVSLVTFFFLTMMAEPLLLEYDR
Ga0209056_1008030053300026538SoilGRPGRGVPGELLIRWAIGAALRLFVLVLYAPLVRIVNLDVESALVSLVTFFFLTMMAEPLLLEYDR
Ga0209161_1002267913300026548SoilVLYAPLVRIVNLDVESALVSLVTFFFLTMMAEPLLLEYDR
Ga0208984_109390513300027546Forest SoilRLLVLVLYAPLARVMFLSLDAALVSLATFFFMTMMAEPLLLEYDR
Ga0209074_1001593143300027787Agricultural SoilTGELFIRWALGAGIRLIVLVLYAPLARILNISLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0209488_1081753423300027903Vadose Zone SoilMNAPGKGAPGELMIRWAIGAVLRLFVLVLYAPLARIVNLSLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307280_1029950723300028768SoilAGRGVPGELLVRWAYGSALRLIVLVLYAPIARIANASLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307323_1012332813300028787SoilPGELLIRWAIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307299_1035421223300028793SoilMRLFVLVLYAPLARIMNISLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307284_1029279313300028799SoilYALLRPARSGKGAPGELLIRWGIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307305_1012425523300028807SoilRWIRWAIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307305_1049531513300028807SoilWGIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307292_1047942323300028811SoilPARSGKGAPGELLIRWAIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307310_1023707813300028824SoilLARIINLSLDAALVSLVTFFFLTMMAEPLLLQYDS
Ga0307310_1071480223300028824SoilGKGAPGELLIRWAIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307289_1029771713300028875SoilLMYAPLARIVNLSLEAALVSLVTFFFLTMVAEPLLLEYDR
Ga0307277_1049804413300028881SoilGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307308_1034844913300028884SoilGSYALLRPARSGKGAPGELLIRWAIGAVLRFFVLLMYAPLARIVNLSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307502_1015441913300031164SoilYAPIARIINLSVEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0170824_12156492223300031231Forest SoilRFVVLVLYAPLARIMFFPLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0310887_1046958713300031547SoilAPGELLIRWSIGAVLRLVVLVLYAPLARVANLSLDAALVSLVTFFFLTMMAEPLLLEYDR
Ga0307468_10044602923300031740Hardwood Forest SoilAVLRFAVLVLYAPLARILNVSLEAALVSLVTFFFLTMMAEPLLLEYDR
Ga0372943_1120222_320_4603300034268SoilMRFVVLVLYAPLARIMFLSLDAALVSLVTFFFLTMMAEPLMLEYDR
Ga0372946_0591971_382_5163300034384SoilLFVLVLYAPLARIINLSLDAALVSLVTFFFLTMMAEPLLLQYDR
Ga0373959_0025638_975_11453300034820Rhizosphere SoilLFIRWGLGAGLRLVVLVLYAPVARIFNVSLEAALVSLVTYFFLTMMAEPLLLEYDR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.