Metagenome / Metatranscriptome Family F079889

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079889
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	86 residues
Representative Sequence	LSQRPSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKAGYNAEVKGKLRESAARLQKLAEQP
Number of Associated Samples	83
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	27.83 %
% of genes near scaffold ends (potentially truncated)	63.48 %
% of genes from short scaffolds (< 2000 bps)	76.52 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (93.913 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (41.739 % of family members)
Environment Ontology (ENVO)	Unclassified (73.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.391 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.89% β-sheet: 11.11% Coil/Unstructured: 50.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF07690	MFS_1	15.65
PF02502	LacAB_rpiB	11.30
PF03061	4HBT	4.35
PF13360	PQQ_2	3.48
PF02769	AIRS_C	2.61
PF12706	Lactamase_B_2	2.61
PF00118	Cpn60_TCP1	1.74
PF05866	RusA	1.74
PF02803	Thiolase_C	0.87
PF00478	IMPDH	0.87
PF14528	LAGLIDADG_3	0.87
PF08704	GCD14	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	11.30
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	1.74
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.87
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	93.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.22 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	13.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	13.91 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Thermoproteota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota	13.91 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Crenarchaeota archaeon 13_1_20CM_2_51_8	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	13.91 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %
Unclassified	root	N/A	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1090174	All Organisms → cellular organisms → Archaea	513	Open in IMG/M
3300002558\|JGI25385J37094_10015207	All Organisms → cellular organisms → Archaea	2756	Open in IMG/M
3300002558\|JGI25385J37094_10023504	All Organisms → cellular organisms → Archaea	2194	Open in IMG/M
3300002558\|JGI25385J37094_10071503	All Organisms → cellular organisms → Archaea	1105	Open in IMG/M
3300002558\|JGI25385J37094_10115173	All Organisms → cellular organisms → Archaea	775	Open in IMG/M
3300002558\|JGI25385J37094_10120995	All Organisms → cellular organisms → Archaea	745	Open in IMG/M
3300002558\|JGI25385J37094_10187695	All Organisms → cellular organisms → Archaea	553	Open in IMG/M
3300002560\|JGI25383J37093_10005776	All Organisms → cellular organisms → Archaea	3930	Open in IMG/M
3300002561\|JGI25384J37096_10002874	All Organisms → cellular organisms → Archaea	6014	Open in IMG/M
3300002562\|JGI25382J37095_10100744	All Organisms → cellular organisms → Archaea	1021	Open in IMG/M
3300002908\|JGI25382J43887_10133375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1279	Open in IMG/M
3300002908\|JGI25382J43887_10310293	All Organisms → cellular organisms → Archaea	684	Open in IMG/M
3300002908\|JGI25382J43887_10361152	All Organisms → cellular organisms → Archaea	614	Open in IMG/M
3300002908\|JGI25382J43887_10479119	All Organisms → cellular organisms → Archaea	527	Open in IMG/M
3300002908\|JGI25382J43887_10484866	All Organisms → cellular organisms → Archaea	523	Open in IMG/M
3300002909\|JGI25388J43891_1065530	All Organisms → cellular organisms → Archaea	551	Open in IMG/M
3300002912\|JGI25386J43895_10156182	All Organisms → cellular organisms → Archaea	570	Open in IMG/M
3300002916\|JGI25389J43894_1027876	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	978	Open in IMG/M
3300005167\|Ga0066672_10182814	All Organisms → cellular organisms → Archaea	1330	Open in IMG/M
3300005167\|Ga0066672_10563028	All Organisms → cellular organisms → Archaea	738	Open in IMG/M
3300005172\|Ga0066683_10407726	All Organisms → cellular organisms → Archaea	839	Open in IMG/M
3300005174\|Ga0066680_10070303	All Organisms → cellular organisms → Archaea	2094	Open in IMG/M
3300005174\|Ga0066680_10865710	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300005174\|Ga0066680_10865712	All Organisms → cellular organisms → Archaea	538	Open in IMG/M
3300005178\|Ga0066688_10161285	All Organisms → cellular organisms → Archaea	1409	Open in IMG/M
3300005178\|Ga0066688_10699824	All Organisms → cellular organisms → Archaea	644	Open in IMG/M
3300005179\|Ga0066684_10039458	All Organisms → cellular organisms → Archaea	2639	Open in IMG/M
3300005187\|Ga0066675_10482847	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	924	Open in IMG/M
3300005445\|Ga0070708_100005507	All Organisms → cellular organisms → Archaea	10037	Open in IMG/M
3300005446\|Ga0066686_11097544	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300005468\|Ga0070707_100000699	All Organisms → cellular organisms → Archaea	33360	Open in IMG/M
3300005468\|Ga0070707_100869808	All Organisms → cellular organisms → Archaea	866	Open in IMG/M
3300005540\|Ga0066697_10025289	All Organisms → cellular organisms → Archaea	3254	Open in IMG/M
3300005540\|Ga0066697_10159828	All Organisms → cellular organisms → Archaea	1333	Open in IMG/M
3300005553\|Ga0066695_10551369	All Organisms → cellular organisms → Archaea	700	Open in IMG/M
3300005554\|Ga0066661_10013696	All Organisms → cellular organisms → Archaea	4128	Open in IMG/M
3300005555\|Ga0066692_10185609	All Organisms → cellular organisms → Archaea	1294	Open in IMG/M
3300005555\|Ga0066692_10917650	All Organisms → cellular organisms → Archaea	536	Open in IMG/M
3300005556\|Ga0066707_10867016	All Organisms → cellular organisms → Archaea	555	Open in IMG/M
3300005557\|Ga0066704_10050393	All Organisms → cellular organisms → Bacteria	2628	Open in IMG/M
3300005557\|Ga0066704_10314808	All Organisms → cellular organisms → Archaea	1055	Open in IMG/M
3300005557\|Ga0066704_10347219	All Organisms → cellular organisms → Archaea	995	Open in IMG/M
3300005559\|Ga0066700_10069313	All Organisms → cellular organisms → Archaea	2231	Open in IMG/M
3300005568\|Ga0066703_10177252	All Organisms → cellular organisms → Archaea	1288	Open in IMG/M
3300005569\|Ga0066705_10291537	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1034	Open in IMG/M
3300005574\|Ga0066694_10296680	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	769	Open in IMG/M
3300005586\|Ga0066691_10825955	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300005586\|Ga0066691_10869753	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300005598\|Ga0066706_10082692	All Organisms → cellular organisms → Archaea	2283	Open in IMG/M
3300005598\|Ga0066706_10917091	All Organisms → cellular organisms → Archaea	681	Open in IMG/M
3300006791\|Ga0066653_10417059	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300006796\|Ga0066665_10805106	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	740	Open in IMG/M
3300006797\|Ga0066659_11283892	All Organisms → cellular organisms → Archaea	611	Open in IMG/M
3300006804\|Ga0079221_11016338	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300009088\|Ga0099830_10195750	All Organisms → cellular organisms → Archaea	1579	Open in IMG/M
3300009089\|Ga0099828_10166026	All Organisms → cellular organisms → Archaea	1958	Open in IMG/M
3300010333\|Ga0134080_10016187	All Organisms → cellular organisms → Archaea	2720	Open in IMG/M
3300010336\|Ga0134071_10303691	All Organisms → cellular organisms → Archaea	801	Open in IMG/M
3300011269\|Ga0137392_11463523	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300012189\|Ga0137388_11988887	All Organisms → cellular organisms → Archaea	510	Open in IMG/M
3300012201\|Ga0137365_10281563	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1234	Open in IMG/M
3300012201\|Ga0137365_11274522	All Organisms → cellular organisms → Archaea	522	Open in IMG/M
3300012204\|Ga0137374_10615627	All Organisms → cellular organisms → Archaea	826	Open in IMG/M
3300012206\|Ga0137380_11123065	All Organisms → cellular organisms → Archaea	669	Open in IMG/M
3300012206\|Ga0137380_11675726	All Organisms → cellular organisms → Archaea	520	Open in IMG/M
3300012207\|Ga0137381_10705010	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	877	Open in IMG/M
3300012211\|Ga0137377_11972165	All Organisms → cellular organisms → Archaea	500	Open in IMG/M
3300012349\|Ga0137387_10973384	All Organisms → cellular organisms → Archaea	610	Open in IMG/M
3300012359\|Ga0137385_11393440	All Organisms → cellular organisms → Archaea	564	Open in IMG/M
3300012403\|Ga0134049_1056078	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	977	Open in IMG/M
3300012532\|Ga0137373_10624906	All Organisms → cellular organisms → Archaea	810	Open in IMG/M
3300012918\|Ga0137396_10866574	All Organisms → cellular organisms → Archaea	663	Open in IMG/M
3300012927\|Ga0137416_12084619	All Organisms → cellular organisms → Archaea	521	Open in IMG/M
3300012975\|Ga0134110_10128975	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1036	Open in IMG/M
3300015358\|Ga0134089_10148894	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	923	Open in IMG/M
3300017654\|Ga0134069_1195713	All Organisms → cellular organisms → Archaea	689	Open in IMG/M
3300017659\|Ga0134083_10119523	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300018433\|Ga0066667_10451652	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300018433\|Ga0066667_11567762	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300018468\|Ga0066662_10028308	All Organisms → cellular organisms → Archaea	3283	Open in IMG/M
3300018468\|Ga0066662_10858849	All Organisms → cellular organisms → Archaea	887	Open in IMG/M
3300021046\|Ga0215015_10041425	All Organisms → cellular organisms → Archaea	1364	Open in IMG/M
3300021088\|Ga0210404_10726554	All Organisms → cellular organisms → Archaea	566	Open in IMG/M
3300025922\|Ga0207646_10890756	All Organisms → cellular organisms → Archaea	790	Open in IMG/M
3300026277\|Ga0209350_1002717	All Organisms → cellular organisms → Archaea	6763	Open in IMG/M
3300026296\|Ga0209235_1000678	All Organisms → cellular organisms → Archaea	17576	Open in IMG/M
3300026296\|Ga0209235_1005949	All Organisms → cellular organisms → Archaea	6836	Open in IMG/M
3300026296\|Ga0209235_1039673	All Organisms → cellular organisms → Archaea	2356	Open in IMG/M
3300026296\|Ga0209235_1145005	All Organisms → cellular organisms → Archaea	956	Open in IMG/M
3300026296\|Ga0209235_1284777	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300026308\|Ga0209265_1024667	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1864	Open in IMG/M
3300026310\|Ga0209239_1000006	All Organisms → cellular organisms → Archaea	147006	Open in IMG/M
3300026318\|Ga0209471_1000403	All Organisms → cellular organisms → Archaea	30118	Open in IMG/M
3300026326\|Ga0209801_1077044	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1467	Open in IMG/M
3300026328\|Ga0209802_1035510	All Organisms → cellular organisms → Archaea	2579	Open in IMG/M
3300026328\|Ga0209802_1086577	All Organisms → cellular organisms → Archaea	1441	Open in IMG/M
3300026328\|Ga0209802_1130413	All Organisms → cellular organisms → Archaea	1091	Open in IMG/M
3300026331\|Ga0209267_1069686	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1540	Open in IMG/M
3300026333\|Ga0209158_1004904	All Organisms → cellular organisms → Bacteria	7382	Open in IMG/M
3300026334\|Ga0209377_1025646	All Organisms → cellular organisms → Bacteria	2902	Open in IMG/M
3300026335\|Ga0209804_1092782	All Organisms → cellular organisms → Archaea	1398	Open in IMG/M
3300026507\|Ga0257165_1016676	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1209	Open in IMG/M
3300026524\|Ga0209690_1089492	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300026528\|Ga0209378_1086660	All Organisms → cellular organisms → Bacteria	1404	Open in IMG/M
3300026532\|Ga0209160_1042553	All Organisms → cellular organisms → Archaea	2718	Open in IMG/M
3300026536\|Ga0209058_1032424	Not Available	3201	Open in IMG/M
3300026538\|Ga0209056_10369140	All Organisms → cellular organisms → Archaea	922	Open in IMG/M
3300026551\|Ga0209648_10286086	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1192	Open in IMG/M
3300027643\|Ga0209076_1009707	All Organisms → cellular organisms → Archaea	2441	Open in IMG/M
3300027643\|Ga0209076_1093402	All Organisms → cellular organisms → Archaea	854	Open in IMG/M
3300027643\|Ga0209076_1206896	All Organisms → cellular organisms → Archaea	537	Open in IMG/M
3300027748\|Ga0209689_1322218	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300031820\|Ga0307473_10577477	All Organisms → cellular organisms → Archaea	772	Open in IMG/M
3300031962\|Ga0307479_11374335	All Organisms → cellular organisms → Archaea	666	Open in IMG/M
3300032180\|Ga0307471_100639589	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → unclassified Thermoproteota → Crenarchaeota archaeon 13_1_20CM_2_51_8	1225	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.52%
Loam	Environmental → Terrestrial → Soil → Loam	3.48%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	67.83%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	41.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	26.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10901742	3300002557	Grasslands Soil	DPFFHAWVCQTRFGGMIRADKKDPLSVLRAALNTLAMRIAKEGYTAAVKGKLKEVAGQLQQLADRP*
JGI25385J37094_100152073	3300002558	Grasslands Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLAMKIAKDGYTAAVKGKLKELAGQLQQLADRP*
JGI25385J37094_100235043	3300002558	Grasslands Soil	RELASELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP*
JGI25385J37094_100715032	3300002558	Grasslands Soil	MVGFDSAIIRKLCVKGRLPLLSQPSDSNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGQLQQLADRP*
JGI25385J37094_101151731	3300002558	Grasslands Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGLLQQLADRP*
JGI25385J37094_101209951	3300002558	Grasslands Soil	LALKLSQRPSDPNRPYCHYCEESTYHEYDPYFHAWMCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS*
JGI25385J37094_101876951	3300002558	Grasslands Soil	EYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
JGI25383J37093_100057762	3300002560	Grasslands Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
JGI25384J37096_100028745	3300002561	Grasslands Soil	VSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKAGYNTEVKGKLREAAARLQKLAEQP*
JGI25382J37095_101007442	3300002562	Grasslands Soil	MVGFDSAIIRKLWGKGRLPLLSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRTELNSLAMKIAKDGYTAAVRGKLKELAGQLQQL
JGI25382J43887_101333751	3300002908	Grasslands Soil	MVGFDSAIIRKLWGKGRLPLLSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRTELNSLAMKIAKDGYTAAVRGKLKELAGQLQQLADRP*
JGI25382J43887_103102931	3300002908	Grasslands Soil	YHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGLLQQLADRP*
JGI25382J43887_103611521	3300002908	Grasslands Soil	LSQRPSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKAGYNAEVKGKLRESAARLQKLAEQP*
JGI25382J43887_104791191	3300002908	Grasslands Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELSSLAMKIAKDGYTAAVKGKLKEVAGQLQQLADRP*
JGI25382J43887_104848661	3300002908	Grasslands Soil	RELAFELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKAGYNAEVKGKLREAAGRLQKLAEQP*
JGI25388J43891_10655301	3300002909	Grasslands Soil	YCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
JGI25386J43895_101561822	3300002912	Grasslands Soil	DPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
JGI25389J43894_10278761	3300002916	Grasslands Soil	ELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAASRLQKLAEQP*
Ga0066672_101828142	3300005167	Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLAMKIAKDGYTAAVKGKLKEVAGQLQQLADRP*
Ga0066672_105630281	3300005167	Soil	IRKLWVNGRLPMLSQPSDPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP*
Ga0066683_104077261	3300005172	Soil	MIRCSRELALKLSQRPSDPNRPYCHYCEEPTYHEYDPYFHAWMCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS*
Ga0066680_100703032	3300005174	Soil	VVGFGLAIIRKLWVNGRLPMLSQPSDPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP*
Ga0066680_108657102	3300005174	Soil	TYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLAMKIAKDGYTAAVKGKLKELAGQLQQLADRP*
Ga0066680_108657122	3300005174	Soil	TYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLTMKIAKDGYTAAVKGKLKELAGQLQQLADHP*
Ga0066688_101612852	3300005178	Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTRLRDAATKLQKLAEG*
Ga0066688_106998241	3300005178	Soil	VVGFGLAIIRKLWVNGRLPMLSQPSDPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIVKEGYTAAVKGKLKEVAGQLQKLADRP*
Ga0066684_100394582	3300005179	Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLVAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0066675_104828472	3300005187	Soil	YCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP*
Ga0070708_1000055077	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LSQRPSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKSGYNAEVKGKLREIAVRMQKLAEGL*
Ga0066686_110975441	3300005446	Soil	ELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKAGYNTEVKGKLREAAARLQKLAEQP*
Ga0070707_10000069921	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LSQRPSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSAIRAELNSLALHVAKSGYNAEVKGKLREIAVRMQKLAE*
Ga0070707_1008698081	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	HPYCRYCEASTYHEYDPFFHAWVCQTCFGGMIRADKKDPLSVLRAAMNTLAMRIAKEGYTAAVKGKLKEVAGQLQQLADRP*
Ga0066697_100252891	3300005540	Soil	YCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS*
Ga0066697_101598282	3300005540	Soil	MIRCSRELALKLSQRPSDPNRPYCHYCEESTYHEYDPYFHAWMCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS*
Ga0066695_105513691	3300005553	Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPFSVIRAELNNVALLVAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0066661_100136965	3300005554	Soil	VVGFGLAIIRKLWVNGRLPMLSQPSDPNHPYCWYCEGATYHEYDPYFHAWVCQTRFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP*
Ga0066692_101856091	3300005555	Soil	ATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLAMKIAKDGYTAAVKGKLKELAGQLQQLADRP*
Ga0066692_109176501	3300005555	Soil	YHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKIREAAARLQKLAEQP*
Ga0066707_108670161	3300005556	Soil	LLSQPSDANHPYCRYCEALTYHEYDSFFHAWVCQTCFGGMIRADKKDPLTALRAELNTLAMKIAKDGYTAAVKGKLKEVAVQLQQLADRL*
Ga0066704_100503933	3300005557	Soil	MLSQPSAPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP*
Ga0066704_103148081	3300005557	Soil	GRHPLLSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGLLQQLADRP*
Ga0066704_103472192	3300005557	Soil	ATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLTMKIAKDGYTAAVKGKLKELAGQLQQLADHP*
Ga0066700_100693133	3300005559	Soil	MLSQPSDPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP*
Ga0066703_101772522	3300005568	Soil	MLPQPSDPNHPYCRYCEGATYHEYDLYFDAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKKGYTAAVKGKLKEVAGQLQKLADRP*
Ga0066705_102915371	3300005569	Soil	PNVRRELASELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP*
Ga0066694_102966801	3300005574	Soil	YFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAASRLQKLAEQP*
Ga0066691_108259551	3300005586	Soil	QPSDANHPYCRYCEASTYHEYDSFFHAWVCQTCFGGMIRADKKDPLTALRAELNTLAMKIAKDGYTAAVKGKLKEVAVQLQQLADRL*
Ga0066691_108697532	3300005586	Soil	EYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKIREAAARLQKLAEQP*
Ga0066706_100826924	3300005598	Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLVAKNGYTSDVKTKL
Ga0066706_109170912	3300005598	Soil	FHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP*
Ga0066653_104170592	3300006791	Soil	HPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKIREAAARLQKLAEQP*
Ga0066665_108051061	3300006796	Soil	YCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLVAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0066659_112838921	3300006797	Soil	PYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAASRLQKLAEQP*
Ga0079221_110163381	3300006804	Agricultural Soil	LVSELSQRPSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSAIRAELNSLALHIAKSGYNAEVKGKLREIAVRMQKLAEET*
Ga0099830_101957502	3300009088	Vadose Zone Soil	MSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKAGYNAEVKGKLREAAARLQKLAEQP*
Ga0099828_101660263	3300009089	Vadose Zone Soil	ATYHEYDPYFHAWVCQTCFGGVIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGQLQQLADRP*
Ga0134080_100161871	3300010333	Grasslands Soil	PYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP*
Ga0134071_103036911	3300010336	Grasslands Soil	RELAFQLSQRPSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKSGYNAEVKGKLKDVAGRLQKLADGS*
Ga0137392_114635231	3300011269	Vadose Zone Soil	LRMSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKAGYNAEVKGKLREVAGRLQKLAEGS*
Ga0137388_119888871	3300012189	Vadose Zone Soil	QRSKGVSLRMSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKAGYNAEVKGKLREAAARLQKLAEQP*
Ga0137365_102815632	3300012201	Vadose Zone Soil	HPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0137365_112745221	3300012201	Vadose Zone Soil	TYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0137374_106156272	3300012204	Vadose Zone Soil	MTYHEYDPFFHAWVCQTCFGGIIRADKKDPFSVIRAEMNGLAVHVAKDGYSPAVRAKMKDIAERLKALAERM*
Ga0137380_111230652	3300012206	Vadose Zone Soil	YHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP*
Ga0137380_116757261	3300012206	Vadose Zone Soil	LSPNVRRELASELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQQ*
Ga0137381_107050102	3300012207	Vadose Zone Soil	HEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0137377_119721651	3300012211	Vadose Zone Soil	YCHYCEESTYHEYEPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHIAKAGYNTEVKGKLREAAARLQKLAEQP*
Ga0137387_109733841	3300012349	Vadose Zone Soil	MTYHEYDPFFHAWVCQTCFGGIIRADKKDPFSVIRAEMNGLAVHVAKDGYSPAVRVKMKDIAERLKALAERM*
Ga0137385_113934401	3300012359	Vadose Zone Soil	QASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0134049_10560782	3300012403	Grasslands Soil	QASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLVAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0137373_106249061	3300012532	Vadose Zone Soil	DLSLSSDPNRPYCRYCEEMTYHEYDPFFHAWVCQTCFGGIIRADKKDPFSVIRAEMNGLAVHVAKDGYSPAVRAKMKDIAERLKALAERM*
Ga0137396_108665741	3300012918	Vadose Zone Soil	PYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS*
Ga0137416_120846191	3300012927	Vadose Zone Soil	YHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNTEVKGKLREAAARLQKLAEQP*
Ga0134110_101289751	3300012975	Grasslands Soil	ASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRSELNNVALLVAKNGYTSDVKTKLRDAATKLQKLAEG*
Ga0134089_101488942	3300015358	Grasslands Soil	HEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKIREAAARLQKLAEQP*
Ga0134069_11957131	3300017654	Grasslands Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNSMALHVAKSGYTSDVKTKLRDAATKLQKLAEG
Ga0134083_101195233	3300017659	Grasslands Soil	RSTVSCHRVSCGSVELDYYPTMIRCSRELALKLSQRPSDPNRPYCHYCEESTYHEYDPYFHAWMCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS
Ga0066667_104516521	3300018433	Grasslands Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLVAKNGYTSDVKTKLRDAATKLQKLAEG
Ga0066667_115677622	3300018433	Grasslands Soil	TYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP
Ga0066662_100283082	3300018468	Grasslands Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGLLQQLADRP
Ga0066662_108588491	3300018468	Grasslands Soil	ATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLTMKIAKDGYTAAVKGKLQELAGQLQQLADHP
Ga0215015_100414251	3300021046	Soil	PYCRYCEASTYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKEVAVQLQQLADRP
Ga0210404_107265541	3300021088	Soil	DPYFHAWVCQTCFGGMIRVDKKDPLSIIRADLNSLALHVAKSGYNAEVKGKLREVAGRLQKLAEGS
Ga0207646_108907562	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	HPYCRYCEASTYHEYDPFFHAWVCQTCFGGMIRADKKDPLSVLRAAMNTLAMRIAKEGYTAAVKGKLKEVAGQLQQLADRP
Ga0209350_10027177	3300026277	Grasslands Soil	MIRCSRELALKLSQRPSDPNRPYCHYCEESTYHEYDPYFHAWMCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS
Ga0209235_100067821	3300026296	Grasslands Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG
Ga0209235_10059497	3300026296	Grasslands Soil	CRYCEASTYHEYDPFFHAWVCQTCFGGMIRADKKDPLSVLRAALNTLAMRIAKEGYTAAVKGKLKEVAGQLQQLADRP
Ga0209235_10396734	3300026296	Grasslands Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLAMKIAKDGYTAAVKGKLKELAGQLQQLADRP
Ga0209235_11450052	3300026296	Grasslands Soil	MVGFDSAIIRKLCVKGRLPLLSQPSDSNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGQLQQLADRP
Ga0209235_12847771	3300026296	Grasslands Soil	QRSKGVSLRMSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKAGYNAEVKGKLREAAARLQKLAEQP
Ga0209265_10246673	3300026308	Soil	YFHAWVCQTCFGGMIRADKKDPLSVIRAELNNVALLAAKNGYTSDVKTKLRDAATKLQKLAEG
Ga0209239_10000066	3300026310	Grasslands Soil	LSQRPSDPNRPYCHYCEESTYHEYDPYFHAWMCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLAEGS
Ga0209471_10004033	3300026318	Soil	VVGFGLAIIRKLWVNGRLPMLSQPSDPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP
Ga0209801_10770441	3300026326	Soil	ELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAAARLQKLAEQP
Ga0209802_10355102	3300026328	Soil	VVGFGLLLIRKLWVNGRLPMLSQPSDPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP
Ga0209802_10865771	3300026328	Soil	MSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKAGYNAEVKGKLREAAARLQKLAEQP
Ga0209802_11304132	3300026328	Soil	MVGFDSAIIRKLWGKGRLPLLSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRTELNSLAMKIAKDGYTAAVRGKLKELAGQLQQLADRP
Ga0209267_10696861	3300026331	Soil	ESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKIREAAARLQKLAEQP
Ga0209158_10049041	3300026333	Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELAGLLQQL
Ga0209377_10256465	3300026334	Soil	LSKPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLTMKIAKDGYTAAVKGKLKELAGQLQQLADHP
Ga0209804_10927822	3300026335	Soil	MLSQPSDPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP
Ga0257165_10166761	3300026507	Soil	STYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKSGYNAEVKGKLREVAGRLQKLAEGS
Ga0209690_10894923	3300026524	Soil	MVGFDSAIIRKLWGKGRLPLLSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRTELNSLAMKIAKDGYTAAVRGKLKELAGQLQQLDDRP
Ga0209378_10866603	3300026528	Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRAELNTLAMKIAKDGYTAAVKGKLKELA
Ga0209160_10425533	3300026532	Soil	LHHFEARLNRFVTLFSVVGFGLAIIRKLWVNGRLPMLSQPSAPNHPYCRYCEGATYHEYDPYFHAWVCQTCFGGMIRADKKDPLTVLRNELNTLAMKIAKEGYTAAVKGKLKEVAGQLQKLADRP
Ga0209058_10324245	3300026536	Soil	LSQASDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDPLSVLRAELNNVALLVAKNGYTSDVKTKLRDAATKLQKLAEG
Ga0209056_103691401	3300026538	Soil	PYCRYCEASTYHEYDSFFHAWVCQTCFGGMIRADKKDPLTALRAELNTLAMKIAKDGYTAAVKGKLKEVAVQLQQLADRL
Ga0209648_102860861	3300026551	Grasslands Soil	SDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRSELNSLALHVAKAGYNAEVKGKLREAAARLQKLAEQP
Ga0209076_10097074	3300027643	Vadose Zone Soil	LSQRPSDPNRPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSTIRAELNSLALHVAKSGYNAEVKGKLREVAGQLQKLADGV
Ga0209076_10934021	3300027643	Vadose Zone Soil	LSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKAGYNAEVKGKLREAAGRLQKLAEQQ
Ga0209076_12068961	3300027643	Vadose Zone Soil	LSQPSDPNHPYCRYCEEATYHEYDPYFHAWVCQTCFGGMIRADKKDALSVLRAELNSLAMKIAKDGYTAAVKGKLKELAGQLQQLADRL
Ga0209689_13222181	3300027748	Soil	RELASELSQRVSDPNHPYCHYCEESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSVIRAELNSLALHVAKSGYNAEVKGKLREAASRLQKLAEQP
Ga0307473_105774772	3300031820	Hardwood Forest Soil	EDSTYHEYDPFFHAWVCQTCFGGMIRADKKDPLAVLRAELNTLAMKIAKDGYTVAVKGKLKEVAVQLQQLADRL
Ga0307479_113743352	3300031962	Hardwood Forest Soil	EESTYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSAIRADLNSLALHVAKSGYNTEVKGKLREVAGRLQKLAEGS
Ga0307471_1006395891	3300032180	Hardwood Forest Soil	STYHEYDPYFHAWVCQTCFGGMIRVDKKDPLSAIRAELNSLALHVAKSGYTADVKGKLREIAVRMQKLSEGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079889

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences