Metagenome Family F079841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079841
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	86 residues
Representative Sequence	HLPEPVDIDESLVLRTAILIREFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGQRKP
Number of Associated Samples	98
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.80 %
% of genes near scaffold ends (potentially truncated)	91.30 %
% of genes from short scaffolds (< 2000 bps)	84.35 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.478 % of family members)
Environment Ontology (ENVO)	Unclassified (35.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.45% β-sheet: 0.00% Coil/Unstructured: 74.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01476	LysM	62.61
PF13414	TPR_11	9.57
PF00899	ThiF	3.48
PF13432	TPR_16	2.61
PF04773	FecR	1.74
PF01632	Ribosomal_L35p	1.74
PF07992	Pyr_redox_2	0.87
PF13188	PAS_8	0.87
PF00581	Rhodanese	0.87
PF13428	TPR_14	0.87
PF08546	ApbA_C	0.87
PF00128	Alpha-amylase	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0291	Ribosomal protein L35	Translation, ribosomal structure and biogenesis [J]	1.74
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.87
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.87
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.87
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.87
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	75.65 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	75.65 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	62.61 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.35 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.61 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.35 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.61 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	4.35 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.61 %
Unclassified	root	N/A	3.48 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.74 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	62.61 %
Unclassified	root	N/A	3.48 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_12364991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1006	Open in IMG/M
3300004463\|Ga0063356_104782005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300005172\|Ga0066683_10272711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1050	Open in IMG/M
3300005175\|Ga0066673_10095699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1586	Open in IMG/M
3300005175\|Ga0066673_10225881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300005175\|Ga0066673_10729196	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005176\|Ga0066679_10127412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1574	Open in IMG/M
3300005187\|Ga0066675_11451444	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005295\|Ga0065707_10760496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300005354\|Ga0070675_100258768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1525	Open in IMG/M
3300005355\|Ga0070671_100505838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300005367\|Ga0070667_102243084	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005434\|Ga0070709_10797420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	741	Open in IMG/M
3300005439\|Ga0070711_100694277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	856	Open in IMG/M
3300005439\|Ga0070711_101665387	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005440\|Ga0070705_100040113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2661	Open in IMG/M
3300005451\|Ga0066681_10651968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300005536\|Ga0070697_100500249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1063	Open in IMG/M
3300005543\|Ga0070672_102163392	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005558\|Ga0066698_10771806	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300005560\|Ga0066670_10352367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	897	Open in IMG/M
3300005568\|Ga0066703_10212393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1176	Open in IMG/M
3300005575\|Ga0066702_10002613	All Organisms → cellular organisms → Bacteria	6465	Open in IMG/M
3300005575\|Ga0066702_10259517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1059	Open in IMG/M
3300005576\|Ga0066708_11010288	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005586\|Ga0066691_10941301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300005718\|Ga0068866_10392865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	892	Open in IMG/M
3300006032\|Ga0066696_10929356	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300006034\|Ga0066656_10417950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	869	Open in IMG/M
3300006046\|Ga0066652_101884271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300006046\|Ga0066652_102001228	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006797\|Ga0066659_10752876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300006804\|Ga0079221_10444005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	821	Open in IMG/M
3300006904\|Ga0075424_101366111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	753	Open in IMG/M
3300009012\|Ga0066710_100789191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1455	Open in IMG/M
3300009038\|Ga0099829_10662042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	868	Open in IMG/M
3300009137\|Ga0066709_102392743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300009177\|Ga0105248_11358903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	804	Open in IMG/M
3300010301\|Ga0134070_10269460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300010303\|Ga0134082_10172629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300010303\|Ga0134082_10356393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300010325\|Ga0134064_10318114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300010366\|Ga0126379_12526979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300010371\|Ga0134125_11861150	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300010398\|Ga0126383_11292069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300010400\|Ga0134122_10296129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1387	Open in IMG/M
3300012198\|Ga0137364_11140857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300012207\|Ga0137381_10313497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1367	Open in IMG/M
3300012210\|Ga0137378_10519216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1099	Open in IMG/M
3300012210\|Ga0137378_10597119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1014	Open in IMG/M
3300012349\|Ga0137387_10043001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2981	Open in IMG/M
3300012357\|Ga0137384_11193706	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300012930\|Ga0137407_10013795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	5838	Open in IMG/M
3300012951\|Ga0164300_11060466	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012977\|Ga0134087_10280058	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	774	Open in IMG/M
3300012977\|Ga0134087_10747646	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012984\|Ga0164309_11682321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300012985\|Ga0164308_12269682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300013296\|Ga0157374_10927671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	889	Open in IMG/M
3300013296\|Ga0157374_12818004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300013297\|Ga0157378_12298340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300014166\|Ga0134079_10006486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3430	Open in IMG/M
3300015356\|Ga0134073_10396541	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300015373\|Ga0132257_100129747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2936	Open in IMG/M
3300018028\|Ga0184608_10403579	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300018061\|Ga0184619_10311467	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300018066\|Ga0184617_1238892	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	544	Open in IMG/M
3300018431\|Ga0066655_10403449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300018431\|Ga0066655_11063764	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300018482\|Ga0066669_10466107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1087	Open in IMG/M
3300018482\|Ga0066669_11428394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300019361\|Ga0173482_10078859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1147	Open in IMG/M
3300019882\|Ga0193713_1108304	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300019887\|Ga0193729_1130573	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	926	Open in IMG/M
3300019996\|Ga0193693_1052930	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300019999\|Ga0193718_1037874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1062	Open in IMG/M
3300020004\|Ga0193755_1079475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1053	Open in IMG/M
3300020006\|Ga0193735_1053466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1196	Open in IMG/M
3300020012\|Ga0193732_1048989	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300020015\|Ga0193734_1012642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1585	Open in IMG/M
3300020199\|Ga0179592_10403645	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300021418\|Ga0193695_1091470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300021432\|Ga0210384_11456200	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300022756\|Ga0222622_10749935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300022756\|Ga0222622_11303779	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300023058\|Ga0193714_1000927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4878	Open in IMG/M
3300024288\|Ga0179589_10041998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1677	Open in IMG/M
3300025918\|Ga0207662_11325110	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300025928\|Ga0207700_11588944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300025931\|Ga0207644_11256138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300025960\|Ga0207651_11571330	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300026301\|Ga0209238_1060500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1345	Open in IMG/M
3300026315\|Ga0209686_1016399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2999	Open in IMG/M
3300026316\|Ga0209155_1094720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1092	Open in IMG/M
3300026316\|Ga0209155_1095510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300026323\|Ga0209472_1203843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300026329\|Ga0209375_1116218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1181	Open in IMG/M
3300026330\|Ga0209473_1046855	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1898	Open in IMG/M
3300026542\|Ga0209805_1279037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300026548\|Ga0209161_10023333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4395	Open in IMG/M
3300026550\|Ga0209474_10012240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	6878	Open in IMG/M
3300026550\|Ga0209474_10050014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2996	Open in IMG/M
3300026550\|Ga0209474_10482780	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300026550\|Ga0209474_10638654	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300027748\|Ga0209689_1064155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2000	Open in IMG/M
3300027903\|Ga0209488_10038647	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3491	Open in IMG/M
3300028379\|Ga0268266_12305979	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300028713\|Ga0307303_10118885	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300028811\|Ga0307292_10114106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1071	Open in IMG/M
3300031446\|Ga0170820_15497208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2365	Open in IMG/M
3300031716\|Ga0310813_11955343	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.35%
Host-Associated	Host-Associated	15.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Plants	Host-Associated → Plants	15.65%
Aquatic	Environmental → Aquatic	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.04%
Sediment	Environmental → Aquatic → Sediment	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.70%
Loam	Environmental → Terrestrial → Soil → Loam	11.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	29.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.09%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.22%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_123649911	3300000890	Soil	VKAGATQLPEPVDIDLDRLLRTASLITQFPPLPSLNLIRNVANGQKKSGGPLINPFIDPTGMNARDVNASTRPQSTPFKPPGDR
Ga0063356_1047820052	3300004463	Arabidopsis Thaliana Rhizosphere	IDESLVLRTAILITGFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPSPQRTPGNGQRKP*
Ga0066683_102727112	3300005172	Soil	HLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLADLTGMGARDVNASTRPPPTPHRTPGDGQRKP*
Ga0066673_100956991	3300005175	Soil	ATQLPEPVDIDLDRLLRTAILIIQFPPLPSLNLIRNVANGQKKSGGPLINPLVDPTGMSARDVNASTRPQSTPFKPPGDRNRKP*
Ga0066673_102258812	3300005175	Soil	HLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLADPTGMGARDVNASTRPPPTPHRTPGDGQRKP*
Ga0066673_107291962	3300005175	Soil	PVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGERKP*
Ga0066679_101274121	3300005176	Soil	VHAGQMLIVKPGAAQLTEPVDIDESLVLRTAILITEFPPLPSLDLMRRVAENQKKSGGPLFNPLIDPTGMDARDVNASTRSQPNPHRTPGNGQRKP*
Ga0066675_114514441	3300005187	Soil	PGAEHLPGPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP*
Ga0065707_107604962	3300005295	Switchgrass Rhizosphere	HAGQMLFVKPDATHLPEPVDIDESLVLRTAILITGFPPLPSLDLIRRVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSPPNPQRTPGNGQRKP*
Ga0070666_105064981	3300005335	Switchgrass Rhizosphere	AILITEFPPLPSLNLMRSVAEKQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPNRTPGNGQSKP*
Ga0070675_1002587682	3300005354	Miscanthus Rhizosphere	PVDIDLDRLLRTAILISEFPPLPSLDLIRKVANGQKKSAGPLINPLIDPTGMDARDVNASTRPQSTPFKPPGDRNRKP*
Ga0070671_1005058381	3300005355	Switchgrass Rhizosphere	LVLRTAILITGFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGQRKP*
Ga0070667_1022430841	3300005367	Switchgrass Rhizosphere	DIDLDSLLRTASLITQFPPLPSLDLIRNVANDQKKSGGPLINPFIDPTGMNARDVNASTRPQSTPFKPPGDRNRKP*
Ga0070709_107974201	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	EPVDIDESLVLRTAILITEFPPLPSRDLMRSVAENQKKSGGPLLNPLIDPTGMDARDVNASIRPQPTPHRTPGDGQRKP*
Ga0070711_1006942771	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AGQMLIVKPGAEHLPEPVDIDESLVLRTAILITKFPPLPSLALMRSVAENQKKSGGPLFNPLIDPTGMDARDVNASTRSQPNPHRTPGNGQRNP*
Ga0070711_1016653872	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DENLILRSAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP*
Ga0070705_1000401134	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TKHPGKKIAVHAGQMLIVKPGAEHLPEPVDIDESLVLRTAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP*
Ga0066681_106519681	3300005451	Soil	QAWLPRHPGRKITVHAGQMLVVKPDAAHLPDPVDIDESLVLRTATLITEFSPLPSLDLMRSVAADQKRLGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPGEGQRKP*
Ga0070697_1005002491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AQLPEPVDIDEILVLRTAILITEFPPLPSLNLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSPPNPQRTPGNGQRKP*
Ga0070672_1000040831	3300005543	Miscanthus Rhizosphere	AILITEFPPLPSLALMRSVAENQRKSGGPLFNPLIDPTGMGARDVNASTRSQPNPNRTPGNGQGKP*
Ga0070672_1021633921	3300005543	Miscanthus Rhizosphere	SEPVDIDLDRLLRTATLITAFPPLPSLDLIRNVANSQKKSGGPLINPLVDPTGMSARDVNASTRPQSTPIKPPGDRNRKP*
Ga0070665_1004121193	3300005548	Switchgrass Rhizosphere	SAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP*
Ga0066698_107718062	3300005558	Soil	GSSQAWLPRHPGQKITVHAGQMLVVNPDAAHLPDPVDIDESLVLRTATLITEFSPLPSLDLMRSVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPSEGQRKP*
Ga0066670_103523672	3300005560	Soil	HLPDPVDIDESLVLRTATLITEFSPLPSLDLMRSVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPREGQRKP*
Ga0066703_102123931	3300005568	Soil	VLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPPPTPHRTPGDGQRKP*
Ga0066702_100026131	3300005575	Soil	GTTHLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPPPTPHRTPGDGQRKP*
Ga0066702_102595171	3300005575	Soil	MLIVRPGAEHLPGPVDIDENLILRTAILITEFPPLPSLDRMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP*
Ga0066708_110102881	3300005576	Soil	LRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRLQPNPHRTPDNGQRKP*
Ga0066691_109413011	3300005586	Soil	LTKHPGKKIIVHAGQMLIVKPDATYLPQPVVIDQSLVLRSAILITEFPPLPSLDLMRRVADNQKKSGGSLFNPLIDPSGMGARDVNASTRPQPTPHRTPGGRSSKP*
Ga0068866_103928652	3300005718	Miscanthus Rhizosphere	AEHLPEPVDIDENLILRSAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP*
Ga0066696_109293562	3300006032	Soil	EHLPEPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGERKP*
Ga0066656_104179502	3300006034	Soil	HLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSAGPLFNPLADPTGMGARDVNASTRPPPTPHRTPGDGQRKP*
Ga0066652_1018842711	3300006046	Soil	LEGNSEAWLTKHPGQKITVHAGQMLVVKPDAAHLPDPVDIDESLVLRTATLITEFSPLPSLDLMRSVAADQKRLGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPGEGQRKP*
Ga0066652_1020012281	3300006046	Soil	VKTGATQLPEPVDIDLDRLLRTAILITQFPPLPSLNLIRNVANGQKKSGGPLINPLVDPTGMSARDVNASTRPQSTPIKPPGDRNRKP*
Ga0066659_107528761	3300006797	Soil	NYSKLSVLEGNSEAWLTKHPGQKITVHAGQMLVVKPGTTHLPDPVDIDETLVLRTATLITEFSPLPSLDLMRSVAADQKRSGGALFNPLVDPTGMGARDVNAASRPQPTPHRTPGDGQRKP*
Ga0079221_104440051	3300006804	Agricultural Soil	MLMVKAGATRLPEPVDIDLDRLLRTATLITAFPPLPSLDLIRYVANSQKKSGGPLINPLIDPTGMGARDVNASSRSQSTPFKPPGGRNRNP*
Ga0075424_1013661112	3300006904	Populus Rhizosphere	MLVVKAGATQLPEPVDIDLDRLLRTAILIIQFPPLPSLNLIRNVANGQKKSGGPLIDPLVDPTGMSARDVNASTRPQSTPFKPPGDRNRKP*
Ga0066710_1007891911	3300009012	Grasslands Soil	TVHAGQMLIVKPDAIYLPQPVVIDQGLVLRSATLITEFPPLPSLDLMRSAADNQKKSGESLFNPLIDPTGMDARDVNASTRPQPTPQRTPGGRNSKP
Ga0099829_106620422	3300009038	Vadose Zone Soil	VDIDENLILRAAILITEFPPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP*
Ga0066709_1023927431	3300009137	Grasslands Soil	GQKITVNAGQMLVVKPGTTHLPDPVDIDETLVLRTATLITEFSPLPSLDLMRSVAADQKRSGGALFNPLVDPTGMGARDVNASSRPQPTPHRTPGDGQRKP*
Ga0105248_113589031	3300009177	Switchgrass Rhizosphere	PVDIDENLVLRTAILITEFPPLPSLNLMRSVAENQKKSGGPLFNPLIDPTGMGARAVNASTRSQPNPQRPPGNGQRKP*
Ga0134070_102694602	3300010301	Grasslands Soil	MLVVKPDAAHLPDPVDIDESLVLRTATLITEFSPLPSLDLMRSVAADQKRLGGPLFNPLVDPTGMGARDVNASTRPPPTPHRTPGDGQRKP*
Ga0134082_101726291	3300010303	Grasslands Soil	EHLPEPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP*
Ga0134082_103563931	3300010303	Grasslands Soil	PGRKITVHAGQMLVVKPDAAHLPDPVDIDESLVLRTATLITEFSPLPSLDLMRSVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPREGQRKP*
Ga0134064_103181141	3300010325	Grasslands Soil	RLLRTAILITEFPPLPSLNLIRNVVNDQKKSGGPLVNPLIDPTGMGARDVNASTRPQSTPFKPPGDRNRKP*
Ga0126379_125269791	3300010366	Tropical Forest Soil	DLDRLLRTAVLITGFPPLPSLNLIRNVASDQKRSGGPLINPLIDPTGMNARDVNASTRPQSTPFKPPPGRNPKP*
Ga0134125_118611502	3300010371	Terrestrial Soil	GQMLIVKPGVEHLPEPVDIDENLILRTAILITEFPPLPSLNLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPNRTPGNAQGKP*
Ga0126383_112920691	3300010398	Tropical Forest Soil	TATLITEFPPLPSLNLIRSVANAQKKSGAALINPLFDPTGMDARDVNASTRPQSTPFKPPPGRNPNP*
Ga0134122_102961291	3300010400	Terrestrial Soil	IDENLILRSAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGQRKP*
Ga0137364_111408571	3300012198	Vadose Zone Soil	MLVVKPDAAHLPDPVDIDESLVLRTATLITEFSPLPSLDLMRSVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPCDGQRKP*
Ga0137381_103134971	3300012207	Vadose Zone Soil	DESLVLRTATLITEFPPLPSLNLMRSVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPQPIPHRTPGDGQRKP*
Ga0137378_105192161	3300012210	Vadose Zone Soil	MLIVKPGATHLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLADPTGMGARDVNASTRPPPTPHRTPGNGQRKP*
Ga0137378_105971191	3300012210	Vadose Zone Soil	PGAEHLPGPVDIDENLILRTAILITEFRPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP*
Ga0137387_100430011	3300012349	Vadose Zone Soil	PGRKIMVHAGEMLVVKPDAAHLPDPVDIDESLVLRTATLITEFPPLPSLNLMRSVAADQKRSGGPLFNPLVDPTGVGARDVNASTRPPPIPHRTPGDGQRKP*
Ga0137384_111937061	3300012357	Vadose Zone Soil	KVTVHAGQILIVKPDATHLPEPVDIDESLVLRTAILITEFSPLPSLDLMRGVAADQKRSGGPLVNPLVDPTGMGARDVNASTRPPPTPQRTPGDGQRKA*
Ga0137407_100137951	3300012930	Vadose Zone Soil	MLIVRPGAEHLPGPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP*
Ga0164300_110604661	3300012951	Soil	VVKAGATQLPEPVDIDLDRLLRTASLITQFPPLPSLNLIRNVANGQKKSGGPLINPFIDPTGMNARDVNASTRPQSTPFKPPGDRNRKP*
Ga0134087_102800582	3300012977	Grasslands Soil	LVVNPDAAHLPDPVDIDESLVLRTATLITEFSPLSSLDLMRSVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPREGQRKP*
Ga0134087_107476461	3300012977	Grasslands Soil	VDIDENLILRTAILIAEFPPLPSLDLMRSVAANQKKSGGPLFNPLIDPTGMGACDVNASTRLQPNPHRTPDNGQRKP*
Ga0164309_116823211	3300012984	Soil	MLVDKPDATHLPEPVDIDENLVLRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGDGQRKP*
Ga0164308_122696821	3300012985	Soil	RGGQMLIVRPGAEHLPEPVDIDESLVLRTAILITEFPPLPSLALMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPNRTPGNGQGKP*
Ga0157374_109276712	3300013296	Miscanthus Rhizosphere	IDLDRLLRTATLITAFPPLPSLDLIRNVANSQKKSGGPLINPLVDPTGMSARDVNASTRPQSTPFKPPGDRNRKP*
Ga0157374_128180041	3300013296	Miscanthus Rhizosphere	AVRAGQMLIVKPGVEHLPEPVDIDENLILRSAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP*
Ga0157378_122983401	3300013297	Miscanthus Rhizosphere	AWLTKHPGKKIAVHAGQMFIVRPGAEHLPEPVDVDENLILRSAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP*
Ga0134079_100064861	3300014166	Grasslands Soil	NLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGAPDVNASTRLQPNPHRTPDNGQRKP*
Ga0134073_103965412	3300015356	Grasslands Soil	DEGLVLRTATLIIEFPPLPSLHLMRNIADNQKKSGGPLLNPLIDPTGMGARDVNASTRPQPTPHRPPGDGQRKP*
Ga0132257_1001297471	3300015373	Arabidopsis Rhizosphere	ATRLPEPVDIDLDRLLRTATLITAFPPLPSLDLIRNVANSQKRSGGPLLNPLIDPTGMGARDVNASARPQSTPFKPPGGRNRNP*
Ga0184608_104035791	3300018028	Groundwater Sediment	DLDRLLRTAILITQFPPLPSLNLIRNVANGQKKSGGPLINPLVDPTGMSARDVNASTRPQSTPFKPPGDRNRKP
Ga0184619_103114672	3300018061	Groundwater Sediment	VDIDESLVLRTAILITEFPPLPSLNLMRSVAENQKKSGGPIFNPLIDPTGMGARDVNASTHSPPNPQRTPGNGQRKP
Ga0184617_12388921	3300018066	Groundwater Sediment	DRLLRTATLITEFPPLPSINLIRRVADNQKKSGGPLINPLIDPTGMGARDVNASTRPQSTPFKPPGDRNPKP
Ga0066655_104034492	3300018431	Grasslands Soil	IAVHAGQMLIVRPGTEHLPEPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGERKP
Ga0066655_110637641	3300018431	Grasslands Soil	AGATQLSEPVDIDLDRLLRTATLITAFPPLPSLDLIRNVVNGQKKSGGPLINALIDPTGMGARDVNASTRPQSTPFKPPGDRNRKP
Ga0066669_104661072	3300018482	Grasslands Soil	HLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLADPTGMGARDVNASTRPPPTPHRTPGDGQRKP
Ga0066669_114283942	3300018482	Grasslands Soil	HAGQMLVAKPGATHLPDPVDIDENLVLRTATLITEFSPLPSLGLMRSVAADQKRSGVPLFNPLVDPTGMGARDVNASSRPQPTPPRTPGAGQRKP
Ga0173482_100788591	3300019361	Soil	QLPEPVEIDESLVLRTAILITGFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP
Ga0193713_11083042	3300019882	Soil	AGQMVIVKPGAAHLPEPVDIDESLVLRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGQRKP
Ga0193729_11305731	3300019887	Soil	DIDESLVLRTAILITEFPPLPSLDFMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP
Ga0193693_10529302	3300019996	Soil	VKPGAEHLPEPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGERKP
Ga0193718_10378742	3300019999	Soil	PGVAHLTEPVDIDESLVLRTAILITEFPPLPSLALMRSVAENQKKSGGPLFNPLIDPTGMDARDVNASTRSQPNPHRTPGNGQLKP
Ga0193755_10794752	3300020004	Soil	HLPEPVDIDESLVLRTAILIREFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGQRKP
Ga0193735_10534661	3300020006	Soil	VKPGAEHLPEPVDIDESLVLRTAILITEFPPLPSLALMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNEQRKP
Ga0193732_10489892	3300020012	Soil	GATHLPEPVDIELDRLLRTATLITEFPPLPSINLIRRVADNQKKSGGPLINPLIDPTGMGARDVNASTRPQSTPFKPPGDRNPKP
Ga0193734_10126421	3300020015	Soil	MLVVKAGATQLPEPVDIDLDRLLRTAILIIQFPPLPSLNLIRNVANGQKKSGGPLINPLVDPTGMSARDVNASTRPQSTPFKPPGDRNRKP
Ga0179592_104036451	3300020199	Vadose Zone Soil	LIVKPDAAHLPEPVNIDESLVLRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDATGMGARDVNASTRSQPNPHRTSGNGQPKP
Ga0193695_10914701	3300021418	Soil	KPGAAHLPELVDIDESLVLRTAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDSTGMGARDVNASTHSPPNPQRTPGNGQRKP
Ga0210384_114562002	3300021432	Soil	LPEPVDIDENLVLRTAILITEFPPLPSLDLMRSVAQNQKKSGGPLLNPLIDPTGMGARDVNASTRSQPNPQRTPGDGQRKP
Ga0222622_107499352	3300022756	Groundwater Sediment	VVKPDATHLPEPVDIDESLVLRTAILITGFPPLPSLDLIRRVAENQKKSGGPLLNPLIDPTGMGARDVNASTRPQPTPHRTPGDGQRKP
Ga0222622_113037792	3300022756	Groundwater Sediment	QMFIVKPGAEHLSEPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLSDPTGMDARDVNASTRSQPNPHRTPGNGQLKP
Ga0193714_10009271	3300023058	Soil	RRSGQAWLTKHPGKKITVHAGQMLLVKPGATQLPEPVDIDESLVLRTAILITEFPPLPGLDLMRSVAENQKKSGEPLLNPLIDPTGMGARDVNASTHSQPNPQRTPGNGQRKP
Ga0179589_100419983	3300024288	Vadose Zone Soil	MVTVKPSAAHLPEPVDIDENLVLRTAILITKFPPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP
Ga0207662_113251102	3300025918	Switchgrass Rhizosphere	LPEPVDIDENLILRSAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSQPNAHRTPGNGQRKP
Ga0207700_115889442	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LVLRTAILITEFPPLPSRDLMRSVAENQKKSGGPLLNPLIDPTGMDARDVNASIRPQPTPHRTPGDGQRKP
Ga0207644_112561382	3300025931	Switchgrass Rhizosphere	LRTAILITGFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGQRKP
Ga0207651_115713302	3300025960	Switchgrass Rhizosphere	LPEPVDIDENLILRTAILITEFPPLPSLNLMRSVAEKQKKSGWPLFNPLIDPTGMGARDVNASTRSQPNPNRTPGNGQSKP
Ga0209238_10605001	3300026301	Grasslands Soil	IVRPGAEHLPGPVDIDENLILRTAILITEFRPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP
Ga0209686_10163994	3300026315	Soil	MLLVKPGAAHLPEPVDIDESLVLRTAILITEFPPLPSLDLMRSVAENQKKSGGPLLNPLIDPTGMGARDVNASTRSPANPQRTPGNGQRKP
Ga0209155_10947202	3300026316	Soil	RMLIVKPGAMHLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLVDPTGMGARDVNASTRPPPTPHRTPGDGQRKP
Ga0209155_10955101	3300026316	Soil	RMLIVKPGAMHLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLADPTGMGARDVNASTRPPPTPHRTPGDGQRKP
Ga0209472_12038432	3300026323	Soil	TEHLPEPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGERKP
Ga0209375_11162182	3300026329	Soil	PGATHLPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLADPTGMGARDVNASTRPPPTPHRTPGDGQRKP
Ga0209473_10468551	3300026330	Soil	DENLVLRTATLITEFSPLPSLGLMRSVAADQKRSGVPLFNPLVDPTGMGARDVNASSRPQPTPPRTPGAGQRKP
Ga0209805_12790371	3300026542	Soil	PVDIDESLVLRTAILITEFPPLPSLDLMRRVAENQKKSGGPLFNPLTDPTGMDARDVNASTRSQPNPHRTPGNGQRKP
Ga0209161_100233337	3300026548	Soil	LPDPVDIDESLVLRTASLITEFPPLPSLDLMRGVAADQKRSGGPLFNPLADPTGMGARDVNASTRPPPTPHRTPGDGQRKP
Ga0209474_100122408	3300026550	Soil	EPVDIDLDRLLRTATLITAFPPLPSLDLIRNVVNGQKKSGGPLINALTDPTGMGARDVNASTRPQSTPFKPPGDRNRKP
Ga0209474_100500144	3300026550	Soil	EHLPEPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGERKP
Ga0209474_104827802	3300026550	Soil	AGQMLIVRPGAEHLPGPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP
Ga0209474_106386542	3300026550	Soil	VLRTATLITEFSPLPSLDFMRSVAADQKRLGGPLFNPLVDPTGMGARDVNASTRPQLTPHRTPGEGQRKP
Ga0209689_10641553	3300027748	Soil	GQMLIVRPGAEHLPGPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGERKP
Ga0209488_100386474	3300027903	Vadose Zone Soil	EIAVPAGQMFIVRPGAEHLPGPVDIDENLILRTAILITEFPPLPSLDLMRSVAENQKKSGEPLFNPLIDPTGMGARDVNASTRSQPNPHRTPGNGQRKP
Ga0268266_123059791	3300028379	Switchgrass Rhizosphere	AGAEQLPEPVEIDESLVLRTAILITGFPPLPSLDLMRSVAENQKKSGGPLFNPLIDPTGMGARDVNASTRSQPNPQRTPGNGQRKP
Ga0307303_101188851	3300028713	Soil	VDIDESLVLRTAILITEFPPLPSLNLMRSVAENQKKSGRPLFNPLIDPTGMGARDVNASTRSQPNPNRTPGNGQGKP
Ga0307292_101141061	3300028811	Soil	GKKIAVHAGQMLIVRPGAEHLPGPVDIDENLILRTAILITEFPPLPSLALMRSVAENQKQSGGPLFNPLIDPTGMDARDVNASTRSQPNPHRTPGNGQLKP
Ga0307304_101140542	3300028885	Soil	TAILIMEFPPLPSLALMRSVAENQKQSGGPLFNPLIDPTGMDARDVNASTRSQPNPHRTPGNGQLKP
Ga0170820_154972083	3300031446	Forest Soil	DLDRLLRTAILIIQFPPLPSLNLIRNVANDQKKSGGPLINPLVDPTGMSARDVNTSTRSQSTPFKPPGDRNGKP
Ga0310813_119553431	3300031716	Soil	PEPVDIDLDRLLRTASLIIQFPPLPSLNLIRNVASGQKKSGGPLINPLVDPTGMSARDVNASTRPQSTPFKPPGDRNRKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences