NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F079827

Metagenome Family F079827

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079827
Family Type Metagenome
Number of Sequences 115
Average Sequence Length 101 residues
Representative Sequence VSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPPVRH
Number of Associated Samples 108
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.04 %
% of genes near scaffold ends (potentially truncated) 98.26 %
% of genes from short scaffolds (< 2000 bps) 94.78 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(19.130 % of family members)
Environment Ontology (ENVO) Unclassified
(26.957 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.087 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.98%    β-sheet: 0.00%    Coil/Unstructured: 57.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00550PP-binding 89.57
PF00355Rieske 5.22
PF08028Acyl-CoA_dh_2 0.87
PF02780Transketolase_C 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105881840All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10143972All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300001661|JGI12053J15887_10332454All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300002562|JGI25382J37095_10216213All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300002912|JGI25386J43895_10181689All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300004268|Ga0066398_10052893All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300005166|Ga0066674_10059405All Organisms → cellular organisms → Bacteria1739Open in IMG/M
3300005177|Ga0066690_10146771All Organisms → cellular organisms → Bacteria → Proteobacteria1548Open in IMG/M
3300005177|Ga0066690_10637187All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005186|Ga0066676_10983430All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300005332|Ga0066388_106672596All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300005336|Ga0070680_101102404All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300005446|Ga0066686_10128669All Organisms → cellular organisms → Bacteria → Proteobacteria1658Open in IMG/M
3300005560|Ga0066670_10375812All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300005574|Ga0066694_10383294All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300005713|Ga0066905_101137455All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300005937|Ga0081455_10505978All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300006032|Ga0066696_10239839All Organisms → cellular organisms → Bacteria → Proteobacteria1169Open in IMG/M
3300006034|Ga0066656_10909980All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300006800|Ga0066660_10020931All Organisms → cellular organisms → Bacteria → Proteobacteria3828Open in IMG/M
3300006847|Ga0075431_100150567All Organisms → cellular organisms → Bacteria → Proteobacteria2396Open in IMG/M
3300006847|Ga0075431_100790242All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300006854|Ga0075425_100872516All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300006904|Ga0075424_101844603All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium639Open in IMG/M
3300006914|Ga0075436_100650020All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300006914|Ga0075436_100853142All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300007255|Ga0099791_10108139All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300009100|Ga0075418_11447048All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300009792|Ga0126374_10796562All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300009811|Ga0105084_1012221All Organisms → cellular organisms → Bacteria → Proteobacteria1340Open in IMG/M
3300009812|Ga0105067_1103337All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300009813|Ga0105057_1017216All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300009817|Ga0105062_1104946All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300009819|Ga0105087_1045039All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300009822|Ga0105066_1028104All Organisms → cellular organisms → Bacteria → Proteobacteria1133Open in IMG/M
3300010303|Ga0134082_10114063All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300010336|Ga0134071_10140324All Organisms → cellular organisms → Bacteria → Proteobacteria1171Open in IMG/M
3300010358|Ga0126370_11632978All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300010362|Ga0126377_12934266All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium550Open in IMG/M
3300010398|Ga0126383_10407410All Organisms → cellular organisms → Bacteria1398Open in IMG/M
3300012199|Ga0137383_10807104All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300012206|Ga0137380_11112344All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300012917|Ga0137395_10309626All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300012918|Ga0137396_11122594All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012922|Ga0137394_10698870All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300012925|Ga0137419_11222483All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300012929|Ga0137404_11776361All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300012930|Ga0137407_10918972All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300012930|Ga0137407_11447217All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300012971|Ga0126369_10182192All Organisms → cellular organisms → Bacteria2008Open in IMG/M
3300012986|Ga0164304_10200001All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300013297|Ga0157378_10475816All Organisms → cellular organisms → Bacteria1244Open in IMG/M
3300015170|Ga0120098_1004356All Organisms → cellular organisms → Bacteria → Proteobacteria1331Open in IMG/M
3300015241|Ga0137418_10864699All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300015373|Ga0132257_100885946All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300016341|Ga0182035_10871870All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300016371|Ga0182034_11400889All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300016387|Ga0182040_10780779All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300016445|Ga0182038_10425225All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300017654|Ga0134069_1339693All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300017939|Ga0187775_10106702All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300017947|Ga0187785_10200320All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300018082|Ga0184639_10563495All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300018089|Ga0187774_10042773All Organisms → cellular organisms → Bacteria1959Open in IMG/M
3300018431|Ga0066655_10011649All Organisms → cellular organisms → Bacteria → Proteobacteria3837Open in IMG/M
3300018468|Ga0066662_12881955All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300024241|Ga0233392_1037307All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300025899|Ga0207642_10279349All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300025910|Ga0207684_10654069All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300025923|Ga0207681_10599514All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300025972|Ga0207668_12101738All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300026118|Ga0207675_102611386All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300026277|Ga0209350_1083836All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300026310|Ga0209239_1357946All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300026313|Ga0209761_1298834All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300026317|Ga0209154_1294669All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300026324|Ga0209470_1115227All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300026324|Ga0209470_1345575All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300026333|Ga0209158_1059239All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300026334|Ga0209377_1328710All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300026335|Ga0209804_1071330All Organisms → cellular organisms → Bacteria1645Open in IMG/M
3300026529|Ga0209806_1110779All Organisms → cellular organisms → Bacteria → Proteobacteria1143Open in IMG/M
3300026529|Ga0209806_1147731All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300026536|Ga0209058_1347252All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300026540|Ga0209376_1020565All Organisms → cellular organisms → Bacteria → Proteobacteria4400Open in IMG/M
3300026550|Ga0209474_10124377All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300027032|Ga0209877_1022553All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300027654|Ga0209799_1014755All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300027949|Ga0209860_1043669All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300027961|Ga0209853_1170552All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300028792|Ga0307504_10048491All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300031199|Ga0307495_10084802All Organisms → cellular organisms → Bacteria723Open in IMG/M
(restricted) 3300031248|Ga0255312_1057813All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300031562|Ga0310886_10330692All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300031681|Ga0318572_10149225All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300031682|Ga0318560_10067591All Organisms → cellular organisms → Bacteria1797Open in IMG/M
3300031740|Ga0307468_100489361All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300031740|Ga0307468_101618361All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300031748|Ga0318492_10285205All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300031782|Ga0318552_10038035All Organisms → cellular organisms → Bacteria2239Open in IMG/M
3300031798|Ga0318523_10166328All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300031819|Ga0318568_10187050All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300031831|Ga0318564_10150837All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300031835|Ga0318517_10334053All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300031940|Ga0310901_10499029All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300032010|Ga0318569_10109788All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1252Open in IMG/M
3300032052|Ga0318506_10464666All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300032064|Ga0318510_10497180All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300032065|Ga0318513_10685097All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300032068|Ga0318553_10202642All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300032075|Ga0310890_11823542All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300032122|Ga0310895_10328210All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium731Open in IMG/M
3300032180|Ga0307471_100411024All Organisms → cellular organisms → Bacteria1483Open in IMG/M
3300032205|Ga0307472_102216469All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium554Open in IMG/M
3300034817|Ga0373948_0130924All Organisms → cellular organisms → Bacteria613Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil19.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.30%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.57%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand7.83%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.09%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.09%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.87%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.87%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.87%
FossillEnvironmental → Terrestrial → Soil → Fossil → Unclassified → Fossill0.87%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.87%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009811Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30EnvironmentalOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300009813Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20EnvironmentalOpen in IMG/M
3300009817Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20EnvironmentalOpen in IMG/M
3300009819Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50EnvironmentalOpen in IMG/M
3300009822Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015170Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300024241Subsurface microbial communities from Mancos shale, Colorado, United States - Mancos A_50_July_PBEnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027032Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027949Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10588184013300000364SoilMQALWKREGVSNNTLMVVQCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALHWAAREREALVRPPVRHGRISSPEALHAELETELNTAIDPRRESPLRFA
AF_2010_repII_A1DRAFT_1014397223300000597Forest SoilMQALWRREGVSNNTLMVVQCDGPLDPARISRSLDRFLDYCPWPSARLRRPFPWGQLHWAAGARDTLTAPPVRHQRLGSPEALHGEL
JGI12053J15887_1033245423300001661Forest SoilMQALWKREGVSNNTLMVVQCDGPLDPARTARALERFLDFCPWPAARLNRPFPWGQLHWAARARSALAAPPVRHQRLSAPEALHAELEAELNRAIDP
JGI25382J37095_1021621323300002562Grasslands SoilMQALWKHAGVSNNTLMVVQCDGPLDPQRIRRSLDRFLDVCPWPAARLRRPFPWGKLHWAARSRAALVGPAVRHRRLRAPEALQAELEAELNAAID
JGI25386J43895_1018168913300002912Grasslands SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPP
Ga0066398_1005289313300004268Tropical Forest SoilVSTPRVRRLPLRGADLVLVAMQALWRHAGVSNNTLMVVQCDGLLEPERIRRALDRFLDWCPWLSARLRRRRPWGGLYWVAGARAAL
Ga0066674_1005940513300005166SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPARIRRALDGFLEICPWPVARLRRPFPWGKLHWAAGRRAV
Ga0066690_1014677143300005177SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARAR
Ga0066690_1063718713300005177SoilMRAGWPFRRSGTTPARRLPLRGADLALIAMQSLWTRASVSNNTLLVVQCDAPIAPERIRRALDRFLGSCPWPAARLRRPFPWGKLHWAAGPP
Ga0066676_1098343013300005186SoilVSTARVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALHWAAHEREALVRPPVRHGRLSSPE
Ga0066388_10667259623300005332Tropical Forest SoilVSTPRVRRLPLRGADLVLVAMQALWRHAGVSNNTLMVVQCDGLLEPERIRRALDRFLDWCPWLSARLRRRRPWGGLYWVAGARAALAAPPLRHQRLDSPAALHAELEAELNRAIDARREP
Ga0070680_10110240423300005336Corn RhizosphereVSTARVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAVERFLDVCPWPAARLSRPFPWGALHWAAHEREALVRPPVRHRRISSPEALHAELETELNTAIDP
Ga0066686_1012866943300005446SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPLVRHRRLSAPEALHVELEAELNTAIDP
Ga0066670_1037581233300005560SoilMQALWKSEGISNNTLMVVHCDGPLDHARIGRALDRFLDFCPWPSARLRRRLPWGPLHRAAEARAALAAPPVRHKRLSSPGALHAELEAELNAAIDPRREPPLRF
Ga0066694_1038329413300005574SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVACDGPLDPARVRRALDGFLEICPWPVARLRRPFPWGKLHWAAGRHVV
Ga0066905_10113745513300005713Tropical Forest SoilVSTPRVRRLPLRGADLVLVAMQALWKHVGVSNNTLMAVQCDGPLDASRIARALERFLDFCPWPAARLRRPFPWGALHWAARSRAALAVPP
Ga0081455_1050597813300005937Tabebuia Heterophylla RhizosphereVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPARLRRAFDRFLLVCPWPVARLRRPFPWGKLSWAAGRDAAPESLPLLHLRVASAER
Ga0066696_1023983933300006032SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDPARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARGPLAAPLVRHRHLSAPEALHVELEA
Ga0066656_1090998023300006034SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPPVRHRSLSAPE
Ga0066660_1002093113300006800SoilMQALWKREGVSNNTLMIVQCDGPLDPARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARGPLAAPLVRHRHLSAPEALHVELEAELNTAIDPRREPPLHFSILDSVSKATGPQSAL
Ga0075431_10015056713300006847Populus RhizosphereVSTTRSRRLPLRGADLVLVAMQTLWKHARVSNNTLMVVQCDGPLDPARIARALERFLDVCPWPAARLRRPFPWGALHWAAHSRDALIAPPVRHRRLPAPEALHAELEAELNLAIDPR
Ga0075431_10079024213300006847Populus RhizosphereVSTPRVRRLPLRGADLVLVAMQALWKRAGVSNNTVMVVQCDGPLDSSRVARALGRFLHFCPWPAARLRRPFPWGALHWAARSRATLTVPPVRHRCLGGPEALHAALEA
Ga0075425_10087251633300006854Populus RhizosphereVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRATERFLDVCPWPAARLSRPFPWGALHWAAHEREALASPPVRHRQ
Ga0075424_10184460323300006904Populus RhizosphereVSTRRIRRLPLRGADLVLVAMQALWRREGVSNNTLMVVHCDGPLEPERIRRALDRFIDFCPWPAARLRRRRPWGGLHWVARARAALTAPPVRHQRLASPVALHAELEAELNRAI
Ga0075436_10065002033300006914Populus RhizosphereVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRATERFLDVCPWPAARLSRPFPWGALHWAAHEREALASSPVRHRQLSSPEALHAELETELN
Ga0075436_10085314213300006914Populus RhizosphereVSTTPVRRLPLRGADLVLVAMQALWNREGVSNNTLMIVQCDGPLEPARVARALERFLGVCPWPAARLRRPFPWGSLHWAARARAPLAASLVRHRHLSAPEALHVELEAELNTAIDPRREP
Ga0099791_1010813943300007255Vadose Zone SoilVSTPRVRRLPLRGADLVLVAMQALWKREGVSNNTLMAVQCDGLLDAERIRRALHRLLDYCPWPAARLRRRLPWGQLHWAAGA
Ga0075418_1144704813300009100Populus RhizosphereVSTTRSCRLPLRGADLVLVAMQTLWKHARVSNNTLMVVQCDGPLDPARIARALERFLDVCPWPAARLRRPFPWGALHWAAHSRDALIAPPV
Ga0126374_1079656223300009792Tropical Forest SoilMQALWRREGVSNNTLMVVQCDGPLDPARISRSLDRFLDYCPWPSARLRRPFPWGQLHWAAGARDTLTAPPVRHQRLGSPEALHGELESEL
Ga0105084_101222143300009811Groundwater SandMRRLPLRGADLVLVAMQSLWKRFGVSNNTVMVVQCDGPIDPARLARALDRFLDFCPWPAARLGRPFPWGKL
Ga0105067_110333713300009812Groundwater SandVSTSRPRRLPLRGADLVLVAMQALWKRAGVSNNTIMVVQCDGPIDPGRIARALDRFLDFCPWPAARLRRPFPWGKLAWAARARAALTAPPLRQRRVDSHDELHVELEAELNRVIDPRREPPL
Ga0105057_101721633300009813Groundwater SandMRRLPLRGADLVLVAMQSLWKRFEVSNNTVMVVQCDGLIDPARLARALDRFLDFCPWPAARLGRPFPWGKLGWAAGPRAALTALPVRRRRIGSPAELHVELEAELNRA
Ga0105062_110494613300009817Groundwater SandMRRLPLRGADLVLVAMQSLWKRFGVSNNTVMVVQCDGPIDPARLARALDRFLDFCPWPAARLRRPFPWGKLGWAAGPRAALTA
Ga0105087_104503923300009819Groundwater SandMQALWKRAGVSNNTIMVVQCDGPIDPGRIARALDRFLDFCPWPAARLRRPFPWGKLAWAARPRAALTTPPLRQRRVDSHDELHVELEAELNRAIDPRREPPLRFAVLDHATEAQSFLVATWFHPLM
Ga0105066_102810413300009822Groundwater SandMQALWKRAGVSNNTIMVVQCDGPIDPGRIARALDRFLDFCPWPAARLRRPFPWGKLAWAARPRAALTTPPLRQRRVDSHDELHVELEAELNRAIDPR
Ga0134082_1011406333300010303Grasslands SoilMQALWKREGISNNTLMVVHCDGPLDHARIGRALDRFLDFCPWPSARLRRRLPWGPLHWAAGARAALAAPPVRHKRLSSPGALHAELEAELNAAIDPRRVSFTRARDGVRARISGPGSFSP
Ga0134071_1014032433300010336Grasslands SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPARIRRALDGFLEICPWPVARLRRPFPWGKLHW
Ga0126370_1163297823300010358Tropical Forest SoilMQALWKREGVSNNTLMVVECDGSIEPERIERALARFLDVCPWPAARLRRSFPWGRLHWAAGRRERLIPPPIRRATAHSHEALHAELEAELNAAIDARRDPLVRFAIIDHPGADGG
Ga0126377_1293426623300010362Tropical Forest SoilVSTTRVHRLPLRGADLVLVAMQALWKRERVSNNTLMVVHCDGSLDPARIARALERFVELCPWPASRLRRPFPWGQLHWSAPANAAAAAPAVRHRRLMTPDGLHALLEAELNRAIDPRVEPPLRVAICDTIDDAAGPQS
Ga0126383_1040741013300010398Tropical Forest SoilVSTPRVRRLPLRGADLVLVAMQALWRHAGVSNNTLMVVQCDGLLEPERIRRALDRFLDWSPWLSARLRRRRPWGGLYWVAGARAALAAPPVRHQRLDSPAALHAELEAELNRAIDARREPPLRFAI
Ga0137383_1080710423300012199Vadose Zone SoilVSTARIRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALHWAAHEREALVRPPVRHGRLSSPEALLAELETELNTAIDPR
Ga0137380_1111234423300012206Vadose Zone SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPARIGRALDGFLEICPWPLARLRRPFPWGKLHWAAGRRAVPGSLPLLHQRVDSPKLLHTMLEAELNAAIDPR
Ga0137395_1030962613300012917Vadose Zone SoilVSTARVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAIERFLDICPWPAARLSRPFPWGALHWAAHEREALVRPPVRHGRLSSPEALHAELETELNTAI
Ga0137396_1112259423300012918Vadose Zone SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECEGPLDPARVRRALDGFLEICPWPVARLRRPFPWGKLHWAAGRRAMPGSLPLLHQRVDSPKLLHTMLEA
Ga0137394_1069887023300012922Vadose Zone SoilMQALWKREGVSNNTLMVVQCDGPLDPARTARALERFLDFCPWPAARLNRPFPWGQLHWAARARSALAAPPVRHQRLSAPEALHA
Ga0137419_1122248323300012925Vadose Zone SoilVRTPGLRRLPLRGADLVLVAMQALWKRAGVSNNTLMVVQCDGLLDPERIRRALDRFLDFCPWPAARLSRPFPWGRLHWAARRRAEMGAPPLRHRYLSSPDALH
Ga0137404_1177636113300012929Vadose Zone SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPARIRRALDGFLEICPWPVARLRRPFPWGK
Ga0137407_1091897233300012930Vadose Zone SoilVSTQRVRRLPLRGADLVLVAMQALWKREGVSNNTLMAVQCDGPLDPARIRRALHCLLDYCPWPAARLRRRLPWGQLHWAAGPRA
Ga0137407_1144721713300012930Vadose Zone SoilVSTPRVRRLPLRGADLVLVAMQALWKHVGVSNNTLMAVQCDGPLDASRIARALERFLDFCPWPAARLRRPFPWGALHWAARSRAALAVPPVRHERLLATEALHSALEAELNAAIDP
Ga0126369_1018219243300012971Tropical Forest SoilMARLPLRGADLVLLAMPALHKRARISNNALLAVDCDGPVDAGRLRRALDRFLDVCPWPAARLRRSFPWGRLHWAAGRRERLIPPPIRRATAHSHEALHAELEAELNAAIDARRDPLVRFAIIDHPGADGGVAGVFAMT
Ga0164304_1020000113300012986SoilVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALHWAAHEREALVT
Ga0157378_1047581613300013297Miscanthus RhizosphereVSTARVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAVERFLDVCPWPAARLSRPFPWGALHWAAHERKALVRPPVRHRRISSPEALHAEL
Ga0120098_100435633300015170FossillVSPSGVRRLPLRGADLVLVAMQSLWKRFGVSNNTVMVVQCDGAIDPARLARALDRFLDFCPWPAARLRRPFPWGKLGWAARPRAALTAPPVRRRRIGSPAELQVELEAELNRAIDPRRESPIRFSI
Ga0137418_1086469913300015241Vadose Zone SoilVRTPGLRRLPLRGADLVLVAMQALWKRAGVSNNTLMVVQCDGLLDPERIRRALDRFLDFCPWPAARLSRPFPWGRLHWAARRRAEMGAPPLRHRYLSSPDALHAVLEAELNAAID
Ga0132257_10088594623300015373Arabidopsis RhizosphereVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVHCDGPLDPARIGRALERFVELCPWPASRLRRPFPWGQLHWAAPAHAAPEAPAVRHQRGARCWRRGISPASRAFSSRLPG*
Ga0182035_1087187013300016341SoilMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARAMRQTPPVRRQRLGAPEA
Ga0182034_1140088923300016371SoilMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARATLRTPPVRRQRLGAPEALHAELEAELNAAIDPRREPPLRFAIFEGLGDPSGTQSALVVTWFHPL
Ga0182040_1078077923300016387SoilMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARAMRQTPPVRRQRLDTPEALHAELEAELNAPIDPRR
Ga0182038_1042522533300016445SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARTTLRTPPVRRQQLDGPAALHAELEAELNAPIDPRGEPPLRFAIF
Ga0134069_133969323300017654Grasslands SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCDGPLDPARISRSLDRFLDFCPWPSARLRRPFPWGQLHWAAGARAALAIPPVRHQRLGSPEALHAELEAELNHAI
Ga0187775_1010670213300017939Tropical PeatlandVTISSVRRLPLRGADLVLVAMQALWKREGISNNTLMVVECEGGLEPERLRRALERFLDVCPWPAARLRRPFPWGALHWAVGERAALRTPPVRRRRLD
Ga0187785_1020032013300017947Tropical PeatlandMQALWKREGVSNNTLMVVECEGGLEPERLRRALERFLDVCPWPAARLRRPFPWGALHWAVGERAALRTPPVRRRRLDSSEAIQAELEAELNAPIDPRRESP
Ga0184639_1056349513300018082Groundwater SedimentVPTRRLPLRGADLILMAMQALWRAGEVSNNALLVVECDGPLPVARVGQALDRFLDDCPWPAARLRRPFPWGKLHWAAGPRADLACP
Ga0187774_1004277353300018089Tropical PeatlandVTISSVRRLPLRGADLVLVAMQALWKREGISNNTLMVVECEGGLEPERLRRALERFLDVCPWPAARLRRPFPWGALHWAVGERAALRTPPVRRRRLDSSEAIQAELEAELNAPIDPRRESPVRFA
Ga0066655_1001164913300018431Grasslands SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPARIRRALDGFLEICPWPVARLRRPFPWGKLH
Ga0066662_1288195523300018468Grasslands SoilMQALWKREGISNNTLMVVQCDGPLDPERIRRALDRFLDVCPWPSARLRRRRPWGQLHWAAGARAALAIPPVRHQRLGQPGALPAELE
Ga0233392_103730723300024241Deep Subsurface SedimentVRTSRLRRLPLRGADLVLVAMQSLWKRAGVSNNTVMVVQCDGPIDPDRIKRALDRFLDFCPWPAARLRRPFPWGKLHWAARPRAAM
Ga0207642_1027934933300025899Miscanthus RhizosphereVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVLCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALHWAAHERKALVRPPVRHRRISSPEALHAELETELNTAID
Ga0207684_1065406933300025910Corn, Switchgrass And Miscanthus RhizosphereVRTPRLRRLPLRGADLVLVAMQSLWKHASVSNNTLMVVQCDGPIDPERITRTLERFLDFCPWPAARLRRPFPWGKLHWAARSRAALVPPPVRHQRLRAP
Ga0207681_1059951413300025923Switchgrass RhizosphereVSTARVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAVERFLDVCPWPAARLSRPFPWGALHWAAHEREALVRPPVRHRRISS
Ga0207668_1210173813300025972Switchgrass RhizosphereVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVLCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALHWA
Ga0207675_10261138623300026118Switchgrass RhizosphereVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVLCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALH
Ga0209350_108383613300026277Grasslands SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPPVRHRSLS
Ga0209239_135794623300026310Grasslands SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPPVRHRSLSAPEALHVELEAELNTAIDPRREPPLHFSILDSVSEATGPQ
Ga0209761_129883423300026313Grasslands SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPPVRHRSLSAPEALHVE
Ga0209154_129466923300026317SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPPVRH
Ga0209470_111522713300026324SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLDVCPWPAARLRRPFPWGPLHWAARARAPLAAPLVCHR
Ga0209470_134557523300026324SoilVSTARVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALHW
Ga0209158_105923913300026333SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDPARIARALERFLGVCPWPAARLRRPFPWGPLHWAPRARGPLAAPLVRHRHLSAPEALH
Ga0209377_132871013300026334SoilVSTPRVRRLPLRGADLVLVAMQALWKHVGVSNNTLMAVQCDGPLDASRIARALERFLDFCPWPAARLRRPFPWGALHWAARSRAALAVPPVRHERLLATEALHSALEAELNAAIDPRHEPPLRL
Ga0209804_107133013300026335SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAP
Ga0209806_111077933300026529SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPGRIRRALDGFLEICPWPVARLRRPFPWGKLHWAAGRRAVPGSLPLLHQRVDSPKLLHSMLEAELN
Ga0209806_114773113300026529SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARA
Ga0209058_134725213300026536SoilVRTPRLRRLPLRGADLVLVAMQALWKHAGVSNNTLMVVQCDRPLDPERIRRSLDRFLDVCPWPAARLRRPFPWGKLHWAARSRAALIGPAVRHQRLRAPEALQA
Ga0209376_102056513300026540SoilMQALWKREGVSNNTLMIVQCDGPLDPARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARGPLAAPLVRHRHLSAPEALHVELEAELNTAIDPRREPPLHFSILDSVSEATGP
Ga0209474_1012437713300026550SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDPARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARGPLAAPLVRHRHLSAPE
Ga0209877_102255313300027032Groundwater SandMRRLPLRGADLVLVAMQSLWKRFGVSNNTVMVVQCDGPIDPARLARALDRFLDFCPWPAARLRRPFPWGKLGWAAGPRAALTALS
Ga0209799_101475513300027654Tropical Forest SoilVSTPRVRRLPLRGADLVLVAMQALWRHAGVSNNTLMVVQCDGLLEPERIRRALDRFLDWSPWLSARLRRRRPWGGLYWVAGARAALAAPPVRHQRLDSPAAL
Ga0209860_104366913300027949Groundwater SandVSTSRPRRLPLRGADLVLVAMQALWKRAGVSNNTIMVVQCDGPIDPGRIARALDRFLDFCPWPAARLRRPFPWGKLAWAARPRAALTTPPLRQRRVDSHDKLHVELEAE
Ga0209853_117055223300027961Groundwater SandVSTSRPRRLPLRGADLVLVAMQALWKRAGVSNNTIMVVQCDGPIDPGRIARALDRFLDFCPWPAARLRRPFPWGKLAWAARPRAALTTPPLRQRRVDSHDELHVELEAELNRAIDPRREPPLRFTVLDHATEARSSLVV
Ga0307504_1004849133300028792SoilVSAHARRLPLRGADLVLVAMQALWRREKISNNTLMVVECDGPLDPTRIRRALDGFLEICPWPVARLRRPFPWGKLHWAAGRHVVPSALSLRQRRIDSPEHLQRELEAELNAVIDPRRES
Ga0307495_1008480213300031199SoilVSGDARRLPLRGADLVLVAMQALWRREKISNNTLMVVECEGPLDPARVRRALDGFLEICPWPVARLRRPFPWGKLHWAAGRDAV
(restricted) Ga0255312_105781333300031248Sandy SoilVSIQRLRRLPLRGADLVLVAMQALWKHAGVSNNTLMVIQCDGPLDPARIARALEGFLDFCPWPAARLRRSIPWGQLHWAARSRAALVAPPVRHRRLSAPE
Ga0310886_1033069213300031562SoilMQALWKREGVSNNTLMVVHCDGPLAPARIARALERFVELCPWPASRLRRPFPWGQLHWAAPAKAAPEAPTVRHQRLTTPDSLHGLLEAELNRAIDPRVEPPLRVAIFDTMIDAAGPQSALVL
Ga0318572_1014922543300031681SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARAMRQTP
Ga0318560_1006759113300031682SoilMQALWRREGVSNNTLMVVQCDGPLDPARISRSLDRFLDYCPWPSARLRRPFPWGQLHWAAGARDTLTAPPVRHQRLGSPEALHAE
Ga0307468_10048936113300031740Hardwood Forest SoilVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIRRAIERFLDICPWPAARLSRPFPWGALHWAAHE
Ga0307468_10161836113300031740Hardwood Forest SoilVSTPRVRRLPLRGADLVLIAMQALWKRAGVSNNTVMVVQCDGPLDSSRVARALGRFLDFCPWPAARLRRPFPWGALHWAARSRATLTVPPV
Ga0318492_1028520533300031748SoilVSTPTVRRLPLRGADLVLVAMQALWRREGVSNNTLMVVQCDGPLDPARISRSLDRFLDYCPWPSARLRRPFPWGQLHWAAGARDTLTAPPVRHQRLGSPEALHAE
Ga0318552_1003803513300031782SoilMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARATLRTPPVRRQRLGAPEALHAELEAELNAAIDPRREPPLRFAIFEG
Ga0318523_1016632833300031798SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGAR
Ga0318568_1018705013300031819SoilMQALWRREGVSNNTLMVVQCDGPLDPARISRSLDRFLDYCPWPSARLRRPFPWGQLHWAAGARDTLTAPPVRHQRLGSPEALHAELESELN
Ga0318564_1015083733300031831SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGAG
Ga0318517_1033405333300031835SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSLEPERIERALARFLDVCPWPAARLRRPF
Ga0310901_1049902923300031940SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNHSLMVVHCDGPLAPARIARALERFVELCPWPASRLRRPFPWGQLHWAAPANAAPEAPTVRHQRLTTPDSLHGLLEA
Ga0318569_1010978813300032010SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPF
Ga0318506_1046466613300032052SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARATLRTPPVRRQRLGAPEA
Ga0318510_1049718013300032064SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARATLRTPPVRRQRLG
Ga0318513_1068509713300032065SoilVSPTPISRLPLRGADLVLVAMQALWKREGVSNNTLMVIEYEGSLEPERIERALARFLDVCPWPAARLRRPFPWGALH
Ga0318553_1020264213300032068SoilMQALWKREGVSNNTLMVIEYEGSIEPERIERALARFLDVCPWPAARLRRPFPWGALHWAAGARAMRQTPPVRRQRLDTPEALHAELEAELNAPIDPRGEPPLRFAIFDGLGDPVGTQSALVVT
Ga0310890_1182354223300032075SoilVSIARLRRLPLRGADLVLVAMQALWKREGVSNNTLMVVQCEGPLDPERIQRAIERFLDVCPWPAARLSRPFPWGALH
Ga0310895_1032821023300032122SoilMQALWKREGVSNNTLMVVHCDGPLAPARIARALERFVELCPWPASRLRRPFPWGQLHWAAPANAAPEAPAVRHQRLTTPDSLHGLLEAELNRAIDPRVEPPLR
Ga0307471_10041102413300032180Hardwood Forest SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMIVQCDGPLDTARIARALERFLGVCPWPAARLRRPFPWGPLHWAARARAPLAAPLV
Ga0307472_10221646923300032205Hardwood Forest SoilVSTPRVRRLPLRGADLVLVAMQALWRREGVSNNTLMVVHCDGPLEPERIRRALDRFMDFCPWPAARLRRRRPWGGLHWVARARAALTAPPVRHQRLASPVALHAELEAELNRAIDPRREPPLRFAILDGAFDGAGPH
Ga0373948_0130924_2_4363300034817Rhizosphere SoilVSTTPVRRLPLRGADLVLVAMQALWKREGVSNNTLMVVHCDGPLAPARIARALERFVELCPWPASRLRRPFPWGQLHWAAPANAAPEAPAVRHQRLTTPDSLHGLLEAELNRAIDPRVEPPLRVAIFDTMIDAAGPQSALVLTWF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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