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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F079802 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 115 |
| Average Sequence Length | 52 residues |
| Representative Sequence | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKT |
| Number of Associated Samples | 93 |
| Number of Associated Scaffolds | 115 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 9.09 % |
| % of genes near scaffold ends (potentially truncated) | 8.70 % |
| % of genes from short scaffolds (< 2000 bps) | 9.57 % |
| Associated GOLD sequencing projects | 81 |
| AlphaFold2 3D model prediction | No |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (93.043 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (35.652 % of family members) |
| Environment Ontology (ENVO) | Unclassified (51.304 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (66.087 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 14.81% β-sheet: 37.04% Coil/Unstructured: 48.15% | Feature Viewer |
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| Powered by Feature Viewer | |||||
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| Pfam ID | Name | % Frequency in 115 Family Scaffolds |
|---|---|---|
| PF05065 | Phage_capsid | 33.91 |
| PF05876 | GpA_ATPase | 2.61 |
| PF05136 | Phage_portal_2 | 0.87 |
| COG ID | Name | Functional Category | % Frequency in 115 Family Scaffolds |
|---|---|---|---|
| COG4653 | Predicted phage phi-C31 gp36 major capsid-like protein | Mobilome: prophages, transposons [X] | 33.91 |
| COG5525 | Phage terminase, large subunit GpA | Mobilome: prophages, transposons [X] | 2.61 |
| COG5511 | Phage capsid protein | Mobilome: prophages, transposons [X] | 0.87 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 93.04 % |
| All Organisms | root | All Organisms | 6.96 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300000116|DelMOSpr2010_c10059027 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 1625 | Open in IMG/M |
| 3300001838|RCM33_1014691 | All Organisms → cellular organisms → Bacteria | 1987 | Open in IMG/M |
| 3300007540|Ga0099847_1109195 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS5 group | 839 | Open in IMG/M |
| 3300009338|Ga0103826_102679 | Not Available | 1308 | Open in IMG/M |
| 3300010318|Ga0136656_1167827 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 745 | Open in IMG/M |
| 3300011984|Ga0119931_1011021 | Not Available | 994 | Open in IMG/M |
| 3300012520|Ga0129344_1212869 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 877 | Open in IMG/M |
| 3300021425|Ga0213866_10361401 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 716 | Open in IMG/M |
| 3300025653|Ga0208428_1061556 | Not Available | 1117 | Open in IMG/M |
| 3300025674|Ga0208162_1097886 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 878 | Open in IMG/M |
| 3300031673|Ga0307377_10280781 | All Organisms → Viruses → Predicted Viral | 1268 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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| Habitat | Taxonomy | Distribution |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 35.65% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 8.70% |
| Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 7.83% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 6.96% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 6.09% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 4.35% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 3.48% |
| Soil | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil | 3.48% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 2.61% |
| River Water | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water | 2.61% |
| Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 2.61% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 1.74% |
| Hypersaline Lake Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment | 1.74% |
| Anoxic Zone Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater | 0.87% |
| Lake Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment | 0.87% |
| Marine Plankton | Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton | 0.87% |
| Drinking Water Treatment Plant | Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant | 0.87% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 0.87% |
| Marine Sediment | Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment | 0.87% |
| Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.87% |
| Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 0.87% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 0.87% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 0.87% |
| Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 0.87% |
| Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 0.87% |
| Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water | 0.87% |
| Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment | 0.87% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000116 | Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010 | Environmental | Open in IMG/M |
| 3300001748 | Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m) | Environmental | Open in IMG/M |
| 3300001838 | Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2a | Environmental | Open in IMG/M |
| 3300006027 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
| 3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
| 3300006868 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA | Environmental | Open in IMG/M |
| 3300006869 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA | Environmental | Open in IMG/M |
| 3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
| 3300006990 | Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG | Environmental | Open in IMG/M |
| 3300007229 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA | Environmental | Open in IMG/M |
| 3300007234 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA | Environmental | Open in IMG/M |
| 3300007344 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 | Environmental | Open in IMG/M |
| 3300007346 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 | Environmental | Open in IMG/M |
| 3300007538 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG | Environmental | Open in IMG/M |
| 3300007539 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG | Environmental | Open in IMG/M |
| 3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
| 3300007541 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG | Environmental | Open in IMG/M |
| 3300007542 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG | Environmental | Open in IMG/M |
| 3300007640 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 | Environmental | Open in IMG/M |
| 3300007778 | Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG | Environmental | Open in IMG/M |
| 3300009026 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 | Environmental | Open in IMG/M |
| 3300009239 | Microbial communities of water from Amazon river, Brazil - RCM11 | Environmental | Open in IMG/M |
| 3300009327 | Microbial communities of water from the North Atlantic ocean - ACM30 | Environmental | Open in IMG/M |
| 3300009338 | Microbial communities of water from the North Atlantic ocean - ACM29 | Environmental | Open in IMG/M |
| 3300009529 | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG | Environmental | Open in IMG/M |
| 3300010296 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA | Environmental | Open in IMG/M |
| 3300010297 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA | Environmental | Open in IMG/M |
| 3300010299 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA | Environmental | Open in IMG/M |
| 3300010318 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA | Environmental | Open in IMG/M |
| 3300010354 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA | Environmental | Open in IMG/M |
| 3300011118 | Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG | Environmental | Open in IMG/M |
| 3300011984 | Freshwater microbial communities from drinking water treatment plant - The University of Hong Kong - Raw_water_201107 | Environmental | Open in IMG/M |
| 3300012520 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012528 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300016697 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES156 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300017701 | Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N | Environmental | Open in IMG/M |
| 3300017714 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15 | Environmental | Open in IMG/M |
| 3300017720 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 | Environmental | Open in IMG/M |
| 3300017723 | Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N | Environmental | Open in IMG/M |
| 3300017733 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23 | Environmental | Open in IMG/M |
| 3300017742 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21 | Environmental | Open in IMG/M |
| 3300017756 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 | Environmental | Open in IMG/M |
| 3300017761 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N | Environmental | Open in IMG/M |
| 3300017763 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20 | Environmental | Open in IMG/M |
| 3300017785 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N | Environmental | Open in IMG/M |
| 3300017951 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300017991 | Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaG | Environmental | Open in IMG/M |
| 3300018421 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018428 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300019272 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101405AT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019274 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300020054 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020074 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m | Environmental | Open in IMG/M |
| 3300020167 | Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20m | Environmental | Open in IMG/M |
| 3300020179 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015056 Kigoma Offshore 0m | Environmental | Open in IMG/M |
| 3300020184 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020197 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m | Environmental | Open in IMG/M |
| 3300020214 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80m | Environmental | Open in IMG/M |
| 3300020220 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m | Environmental | Open in IMG/M |
| 3300020578 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015038 Kigoma Deep Cast 35m | Environmental | Open in IMG/M |
| 3300021093 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015023 Mahale A surface | Environmental | Open in IMG/M |
| 3300021425 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284 | Environmental | Open in IMG/M |
| 3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
| 3300022074 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2) | Environmental | Open in IMG/M |
| 3300022167 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2) | Environmental | Open in IMG/M |
| 3300022187 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3) | Environmental | Open in IMG/M |
| 3300022200 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3) | Environmental | Open in IMG/M |
| 3300024054 (restricted) | Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MG | Environmental | Open in IMG/M |
| 3300024344 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025508 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025543 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025646 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025647 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025653 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025655 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025674 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025687 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025769 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes) | Environmental | Open in IMG/M |
| 3300025771 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025843 | Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm (SPAdes) | Environmental | Open in IMG/M |
| 3300027808 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes) | Environmental | Open in IMG/M |
| 3300027861 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG | Environmental | Open in IMG/M |
| 3300027888 | Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes) | Environmental | Open in IMG/M |
| 3300027977 (restricted) | Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12m | Environmental | Open in IMG/M |
| 3300027995 (restricted) | Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_1_MG | Environmental | Open in IMG/M |
| 3300028125 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB | Environmental | Open in IMG/M |
| 3300031578 | Soil microbial communities from Risofladan, Vaasa, Finland - TR-2 | Environmental | Open in IMG/M |
| 3300031673 | Soil microbial communities from Risofladan, Vaasa, Finland - TR-3 | Environmental | Open in IMG/M |
| 3300031999 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20 | Environmental | Open in IMG/M |
| 3300032164 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0 | Environmental | Open in IMG/M |
| 3300032516 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0 | Environmental | Open in IMG/M |
| 3300034418 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| DelMOSpr2010_100590271 | 3300000116 | Marine | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSS |
| JGI11772J19994_10284393 | 3300001748 | Saline Water And Sediment | MAIQDTFAFLDTNEFGVTCQIGSGDEFVGILDSPMEVIAGGMALTREYLLTAKTS |
| RCM33_10146912 | 3300001838 | Marine Plankton | MAIQDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYA |
| Ga0075462_101732751 | 3300006027 | Aqueous | MALSETLAFLNTDEFGTTCQIGSNPEFVGILDSPVDVIAGGMA |
| Ga0070749_105565251 | 3300006802 | Aqueous | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGT |
| Ga0070754_103916331 | 3300006810 | Aqueous | MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALSREYLLYAPTS |
| Ga0075481_102081871 | 3300006868 | Aqueous | MALSETLAFLNTDEFGVTCQIGDGGEFVGILDSPVEVIAGGMALSREYLLYATTSDVSNASRGTSITVDGSAY |
| Ga0075477_101633324 | 3300006869 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRG |
| Ga0075477_103367742 | 3300006869 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGM |
| Ga0070746_101721531 | 3300006919 | Aqueous | MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGG |
| Ga0098046_10886321 | 3300006990 | Marine | MSLQDTFAFLNTDEFGVTCQIGAGADFVGILDSPMDVIAGGMALSREYLLTAKTSD |
| Ga0075468_101892661 | 3300007229 | Aqueous | MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIAGGVALSREYLLMA |
| Ga0075460_101389054 | 3300007234 | Aqueous | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLT |
| Ga0075460_102138941 | 3300007234 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA |
| Ga0070745_12592501 | 3300007344 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLL |
| Ga0070753_12895031 | 3300007346 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMA |
| Ga0099851_12235951 | 3300007538 | Aqueous | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA |
| Ga0099849_11332814 | 3300007539 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTS |
| Ga0099849_13514482 | 3300007539 | Aqueous | MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTSI |
| Ga0099847_11091951 | 3300007540 | Aqueous | MALSETLAFLNTDEFGTTCRIGDGSDFVGILDSPVDVIAGG |
| Ga0099848_12671562 | 3300007541 | Aqueous | MAIQDTLAFLNTDEFGVTCSIGASSFVGILDSPMEVLAGGMH* |
| Ga0099846_12715121 | 3300007542 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMA |
| Ga0070751_11644541 | 3300007640 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMAL |
| Ga0102954_12828541 | 3300007778 | Water | MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREY |
| Ga0102829_10429361 | 3300009026 | Estuarine | MAISDTLAFLNTDEFGVTCQIGQSASFVGVLDSPTDLIAGGMALSREYLLLAKTSDVSAT |
| Ga0103858_101886632 | 3300009239 | River Water | MAIQDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYAKTSDVSAA |
| Ga0103843_1084351 | 3300009327 | River Water | MALSETLAFLNTDEFGTTCRIGDGDDFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTCLTV |
| Ga0103826_1026791 | 3300009338 | River Water | MALSETLAFLNTDEFGTTCRIGDGDDFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA |
| Ga0114919_102603354 | 3300009529 | Deep Subsurface | MAIQDTFAFLDTSEFGVTCQIGSGDEFVGILDSPMEVIAGGMALTREYLLTAKTSDVGSASRG |
| Ga0114919_104037051 | 3300009529 | Deep Subsurface | MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYL |
| Ga0129348_12362062 | 3300010296 | Freshwater To Marine Saline Gradient | MALSETLAFLNTDEFGTTCQIGSNPEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRG |
| Ga0129348_13125831 | 3300010296 | Freshwater To Marine Saline Gradient | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYL |
| Ga0129345_12457242 | 3300010297 | Freshwater To Marine Saline Gradient | MAIQDTLAFLNVNEFGVTCSIGGSSFVGILDSPVEVLAGG |
| Ga0129342_12618002 | 3300010299 | Freshwater To Marine Saline Gradient | MALSETLAFLNTDEFGTTCRIGAGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA |
| Ga0129342_12785682 | 3300010299 | Freshwater To Marine Saline Gradient | MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAK |
| Ga0136656_10793781 | 3300010318 | Freshwater To Marine Saline Gradient | MALQDTFAFLNTDEFGVTCQIGAGAEFVGILDSPMEVIAGGMALSREYLLTAKTSDVSALTRGSS |
| Ga0136656_11678271 | 3300010318 | Freshwater To Marine Saline Gradient | MALSETLAFLNADEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSS |
| Ga0136656_12008553 | 3300010318 | Freshwater To Marine Saline Gradient | MALSETLAFLNTDEFGTTCQIGSNPEFVGILDSPVDVIAGGMAL |
| Ga0129333_111074631 | 3300010354 | Freshwater To Marine Saline Gradient | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKT |
| Ga0114922_111001081 | 3300011118 | Deep Subsurface | MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSR |
| Ga0119931_10110211 | 3300011984 | Drinking Water Treatment Plant | MAISDTLAFLNVDEFGVTCQIGAGASFVGILDSPMEVLAGG |
| Ga0129344_12128694 | 3300012520 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSRE |
| Ga0129352_110207891 | 3300012528 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGG |
| Ga0180057_11260041 | 3300016697 | Freshwater | MAFPELPDAFLNEFGVTCQIGVGTAFLGILDSPMDVIAGGMALSREYLLMAKTSDVSTAARGTSITVDSV |
| Ga0181364_10536031 | 3300017701 | Freshwater Lake | MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPMDLIAGGMALPREHLLFAKTSDVSDTVRGT |
| Ga0181412_10677314 | 3300017714 | Seawater | MALEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPMDVIAGGVALSREYLLMAKTSDVSSAAR |
| Ga0181383_10035601 | 3300017720 | Seawater | MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIAGGVALSREYLLMAKTSDVSSA |
| Ga0181362_10354193 | 3300017723 | Freshwater Lake | MAISDTLAFLNTDEFGVTCQIGQNASFVGVLDSPTDLI |
| Ga0181426_10153294 | 3300017733 | Seawater | MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIAG |
| Ga0181399_11223223 | 3300017742 | Seawater | MALEDTLAFLNTEEFGTTCQINGGSNFVGIFDSPVDVIAGGVALSREYLLMA |
| Ga0181382_11659641 | 3300017756 | Seawater | MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIA |
| Ga0181356_10129784 | 3300017761 | Freshwater Lake | MAITDTLAFLNTDEFGVTCQIGADPSFVGILDSPMEQLAGGMALSREYLLYAKTSDVSATVRGSAITV |
| Ga0181410_10489854 | 3300017763 | Seawater | MAIEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPMDVIAGGVALSREYLLMAKTSDVSSAARGTSITVAS |
| Ga0181355_13959831 | 3300017785 | Freshwater Lake | MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPMDLIAGGMALSREYLLLAKTSDVSAAVR |
| Ga0181577_100085401 | 3300017951 | Salt Marsh | MAIQDTFAFLDTNEFGVTCQIGGGSEFVGILDSPMEVIAGGMALTREYLLTAKT |
| Ga0181577_106400621 | 3300017951 | Salt Marsh | MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALSREYLLYAPTSDVSSASRGTSITV |
| Ga0181577_108915312 | 3300017951 | Salt Marsh | MAIQDTFAFLDTNEFGVTCQIGSGDEFVGILDSPMEVIAG |
| Ga0180434_108543562 | 3300017991 | Hypersaline Lake Sediment | MAIQDTFAFLDTNEFGVTCQIGGGDEFVGILDSPMEVIAGGMALTREYLLTAK |
| Ga0180434_109808692 | 3300017991 | Hypersaline Lake Sediment | MAIQDTFAFLDTSEFGVTCQIGSGDEFVGILDSPM |
| Ga0181592_105673191 | 3300018421 | Salt Marsh | MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPV |
| Ga0181568_112837231 | 3300018428 | Salt Marsh | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTS |
| Ga0182059_14119152 | 3300019272 | Salt Marsh | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGM |
| Ga0182073_14474782 | 3300019274 | Salt Marsh | MALSETLAFLNTDEFGVTCQIGYGDEFVGILDSPVDVIAGGVALSREYLLYAPTSDVSSASRGTSI |
| Ga0181594_102248851 | 3300020054 | Salt Marsh | MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDV |
| Ga0181594_103408071 | 3300020054 | Salt Marsh | MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALS |
| Ga0194113_111051472 | 3300020074 | Freshwater Lake | MAIQDTLAFLNVDEFGIACSIGASSFVGILDSPVEVLAGGMALSRE |
| Ga0194035_10431503 | 3300020167 | Anoxic Zone Freshwater | MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPTDLIAGGMALSREYLLLAKTSDVNAAVRGTAIT |
| Ga0194134_103400801 | 3300020179 | Freshwater Lake | MAISDTLAFLNVDEFGVTCQIGAGASFVGILDSPMEVLAGGMAL |
| Ga0181573_102007961 | 3300020184 | Salt Marsh | MAIQDTFAFLDTNEFGVTCQIGGGSEFVGILDSPMEVIAGGMALT |
| Ga0194128_100490784 | 3300020197 | Freshwater Lake | MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLL |
| Ga0194132_101900671 | 3300020214 | Freshwater Lake | MAISETLAFLNTNEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYAKTSDVSATARGTA |
| Ga0194119_106339761 | 3300020220 | Freshwater Lake | MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYAKTSDVSATARGTSITVDSV |
| Ga0194129_1001044313 | 3300020578 | Freshwater Lake | MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEQLAGGMALTREYLLYAK |
| Ga0194123_105278011 | 3300021093 | Freshwater Lake | MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPME |
| Ga0213866_101802333 | 3300021425 | Seawater | MINDTLAFLSLSEFAVTCQIGAGAEFKGILDSPMDVI |
| Ga0213866_103614013 | 3300021425 | Seawater | MAIQETLAFLNVDEFGVTCSIGGSSFVGILDSPVEVLAGGMALSREYLLYAKTA |
| Ga0222718_100127391 | 3300021958 | Estuarine Water | MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGM |
| Ga0224906_10386154 | 3300022074 | Seawater | MALEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPVDVIAGGVALSREYLLMAKTSDVSSAARGTSIT |
| Ga0224906_11156571 | 3300022074 | Seawater | MALEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPVDVIAG |
| Ga0212020_10582433 | 3300022167 | Aqueous | MALSETLAFLNTDEFGTTCRIGSNPEFVGILDSPVDVIAGGVALSREYLLYAP |
| Ga0196899_11131961 | 3300022187 | Aqueous | MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALSREYLLYAPTSDVSSASRGTSITVGGSAYTV |
| Ga0196901_10129145 | 3300022200 | Aqueous | MALSETLAFLNADEFGTVCRIGGGDEFVGILDSPVDVIAGGIA |
| Ga0196901_11065354 | 3300022200 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTSI |
| Ga0196901_11540043 | 3300022200 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTA |
| (restricted) Ga0233425_104320831 | 3300024054 | Freshwater | MAISDTLPFLNTNEFGVTCQIGAGASFVGVLDSPMDVIAGGMAL |
| Ga0209992_101846323 | 3300024344 | Deep Subsurface | MAIQDTFAFLDTNEFGVTCQIGSGSEFVGILDSPMEVIAGGMA |
| Ga0208148_10236051 | 3300025508 | Aqueous | MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPMDVIAGG |
| Ga0208303_10882021 | 3300025543 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVS |
| Ga0208303_10959813 | 3300025543 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTA |
| Ga0208161_10388734 | 3300025646 | Aqueous | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSR |
| Ga0208160_10393811 | 3300025647 | Aqueous | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKTSD |
| Ga0208160_10609244 | 3300025647 | Aqueous | MALQDTFAFLNTDEFGVTCQIGAGAEFVGILDSPMEVIAGGMALSREYLLT |
| Ga0208428_10615561 | 3300025653 | Aqueous | MALSETLAFLNTDEFGVTCQIGDGGEFVGILDSPVEVIAGG |
| Ga0208795_11223053 | 3300025655 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVS |
| Ga0208162_10978861 | 3300025674 | Aqueous | MALSETLAFLNADEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAKTSDV |
| Ga0208162_12001362 | 3300025674 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALS |
| Ga0208019_10847974 | 3300025687 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDV |
| Ga0208019_11522421 | 3300025687 | Aqueous | MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGG |
| Ga0208767_12541281 | 3300025769 | Aqueous | MALQDTFAFLNTDEFGITCQIGAGAEFVGILDSPMEVI |
| Ga0208427_10525994 | 3300025771 | Aqueous | MALQDTFAFLNTDEFGITCQIGAGAEFVGILDSPMEVIAGGMALSREYLLI |
| Ga0209182_101813552 | 3300025843 | Lake Sediment | MAIADTFAFLNTDEFGVTCQIGAGQSFVGILDSPMEQLAGGMALTREY |
| Ga0209354_103362862 | 3300027808 | Freshwater Lake | MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPMDLIAGGMALSREYLLLAKTSDVS |
| (restricted) Ga0233415_100413861 | 3300027861 | Seawater | MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYLLTAKASDV |
| Ga0209635_103981824 | 3300027888 | Marine Sediment | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIA |
| (restricted) Ga0247834_10118639 | 3300027977 | Freshwater | MAISDTLTFLNIDEFGVTCQIGAGASFVGVLDSPMDVIAGGMALSREYMLLAKTSDVSA |
| (restricted) Ga0233418_103319242 | 3300027995 | Sediment | MAISDTLAFLNVDEFGVTCQIGQGSSFVGILDSPME |
| Ga0256368_10407061 | 3300028125 | Sea-Ice Brine | MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYLLTAKASDVSALTRGSSIPS |
| Ga0307376_104592021 | 3300031578 | Soil | MAIADTLAFLNTDEFGVTCQIGAGPSFVGILDSPMEQLAGGMALTREYLLYAKTSDVSAT |
| Ga0307377_100826611 | 3300031673 | Soil | MAIADTLAFLNTDEFGVTCQIGAGASFVGILDSPMEQLAGGMAL |
| Ga0307377_101486004 | 3300031673 | Soil | MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYLLTAKASDVSALTRGSSITVASAA |
| Ga0307377_102807811 | 3300031673 | Soil | MAIQDTLAFLNINEFGITCSIGGSSFVGILDSPVDVIAGGMALSREYSLLAKTSDVSS |
| Ga0315274_118931371 | 3300031999 | Sediment | MAIADTFAFLNTDEFGVTCQIDAGQSFVGILDSPMEQLAGGMALTREYLLYAKT |
| Ga0315283_123864031 | 3300032164 | Sediment | MAITDTLAFLNTDEFGVTCQIGADPSFVGILDSPMEQLAGGMALTREYLLYAKTSDVSATVRGSAI |
| Ga0315273_131019762 | 3300032516 | Sediment | MAITDTLAFLNTDEFGVTCQIGADPSFVGILDSPMEQLAGGMALSREYLLYAKTSDVSATVRGS |
| Ga0348337_090471_2_199 | 3300034418 | Aqueous | MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTSI |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |