Metagenome / Metatranscriptome Family F079802

Basic Information
Family ID	F079802
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	52 residues
Representative Sequence	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKT
Number of Associated Samples	93
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.09 %
% of genes near scaffold ends (potentially truncated)	8.70 %
% of genes from short scaffolds (< 2000 bps)	9.57 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (93.043 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (35.652 % of family members)
Environment Ontology (ENVO)	Unclassified (51.304 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (66.087 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1DelMOSpr2010_100590271 2JGI11772J19994_10284393 3RCM33_10146912 4Ga0075462_101732751 5Ga0070749_105565251 6Ga0070754_103916331 7Ga0075481_102081871 8Ga0075477_101633324 9Ga0075477_103367742 10Ga0070746_101721531 11Ga0098046_10886321 12Ga0075468_101892661 13Ga0075460_101389054 14Ga0075460_102138941 15Ga0070745_12592501 16Ga0070753_12895031 17Ga0099851_12235951 18Ga0099849_11332814 19Ga0099849_13514482 20Ga0099847_11091951 21Ga0099848_12671562 22Ga0099846_12715121 23Ga0070751_11644541 24Ga0102954_12828541 25Ga0102829_10429361 26Ga0103858_101886632 27Ga0103843_1084351 28Ga0103826_1026791 29Ga0114919_102603354 30Ga0114919_104037051 31Ga0129348_12362062 32Ga0129348_13125831 33Ga0129345_12457242 34Ga0129342_12618002 35Ga0129342_12785682 36Ga0136656_10793781 37Ga0136656_11678271 38Ga0136656_12008553 39Ga0129333_111074631 40Ga0114922_111001081 41Ga0119931_10110211 42Ga0129344_12128694 43Ga0129352_110207891 44Ga0180057_11260041 45Ga0181364_10536031 46Ga0181412_10677314 47Ga0181383_10035601 48Ga0181362_10354193 49Ga0181426_10153294 50Ga0181399_11223223 51Ga0181382_11659641 52Ga0181356_10129784 53Ga0181410_10489854 54Ga0181355_13959831 55Ga0181577_100085401 56Ga0181577_106400621 57Ga0181577_108915312 58Ga0180434_108543562 59Ga0180434_109808692 60Ga0181592_105673191 61Ga0181568_112837231 62Ga0182059_14119152 63Ga0182073_14474782 64Ga0181594_102248851 65Ga0181594_103408071 66Ga0194113_111051472 67Ga0194035_10431503 68Ga0194134_103400801 69Ga0181573_102007961 70Ga0194128_100490784 71Ga0194132_101900671 72Ga0194119_106339761 73Ga0194129_1001044313 74Ga0194123_105278011 75Ga0213866_101802333 76Ga0213866_103614013 77Ga0222718_100127391 78Ga0224906_10386154 79Ga0224906_11156571 80Ga0212020_10582433 81Ga0196899_11131961 82Ga0196901_10129145 83Ga0196901_11065354 84Ga0196901_11540043 85Ga0233425_104320831 86Ga0209992_101846323 87Ga0208148_10236051 88Ga0208303_10882021 89Ga0208303_10959813 90Ga0208161_10388734 91Ga0208160_10393811 92Ga0208160_10609244 93Ga0208428_10615561 94Ga0208795_11223053 95Ga0208162_10978861 96Ga0208162_12001362 97Ga0208019_10847974 98Ga0208019_11522421 99Ga0208767_12541281 100Ga0208427_10525994 101Ga0209182_101813552 102Ga0209354_103362862 103Ga0233415_100413861 104Ga0209635_103981824 105Ga0247834_10118639 106Ga0233418_103319242 107Ga0256368_10407061 108Ga0307376_104592021 109Ga0307377_100826611 110Ga0307377_101486004 111Ga0307377_102807811 112Ga0315274_118931371 113Ga0315283_123864031 114Ga0315273_131019762 115Ga0348337_090471_2_199
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1DelMOSpr2010_100590271 2JGI11772J19994_10284393 3Ga0075462_101732751 4Ga0075481_102081871 5Ga0075468_101892661 6Ga0099848_12671562 7Ga0114922_111001081 8Ga0180057_11260041 9Ga0181364_10536031 10Ga0181362_10354193 11Ga0181356_10129784 12Ga0181577_108915312 13Ga0181592_105673191 14Ga0213866_101802333 15Ga0213866_103614013 16Ga0307377_101486004
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76 1DelMOSpr2010_100590271 2JGI11772J19994_10284393 3Ga0075462_101732751 4Ga0075481_102081871 5Ga0075468_101892661 6Ga0099848_12671562 7Ga0114922_111001081 8Ga0180057_11260041 9Ga0181364_10536031 10Ga0181362_10354193 11Ga0181356_10129784 12Ga0181577_108915312 13Ga0181592_105673191 14Ga0213866_101802333 15Ga0213866_103614013 16Ga0307377_101486004
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.81% β-sheet: 37.04% Coil/Unstructured: 48.15%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF05065	Phage_capsid	33.91
PF05876	GpA_ATPase	2.61
PF05136	Phage_portal_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	33.91
COG5525	Phage terminase, large subunit GpA	Mobilome: prophages, transposons [X]	2.61
COG5511	Phage capsid protein	Mobilome: prophages, transposons [X]	0.87

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	6.96 %
Unclassified	root	N/A	93.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	0.87 %
Unclassified	root	N/A	93.04 %
Viruses	superkingdom	All Organisms → Viruses	6.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %
Unclassified	root	N/A	93.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %
Unclassified	root	N/A	93.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %
Unclassified	root	N/A	93.04 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %
Unclassified	root	N/A	93.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %
Unclassified	root	N/A	93.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %
Unclassified	root	N/A	93.04 %
uncultured Mediterranean phage MEDS5 group	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS5 group	0.87 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10059027	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1625	Open in IMG/M
3300001838\|RCM33_1014691	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300007540\|Ga0099847_1109195	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS5 group	839	Open in IMG/M
3300009338\|Ga0103826_102679	Not Available	1308	Open in IMG/M
3300010318\|Ga0136656_1167827	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	745	Open in IMG/M
3300011984\|Ga0119931_1011021	Not Available	994	Open in IMG/M
3300012520\|Ga0129344_1212869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	877	Open in IMG/M
3300021425\|Ga0213866_10361401	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	716	Open in IMG/M
3300025653\|Ga0208428_1061556	Not Available	1117	Open in IMG/M
3300025674\|Ga0208162_1097886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	878	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.52%
Terrestrial	Environmental → Terrestrial	3.48%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	22.61%
Marine	Environmental → Aquatic → Marine	70.43%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.48%
Soil	Environmental → Terrestrial → Soil	3.48%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	3.48%
Coastal	Environmental → Aquatic → Marine → Coastal	46.09%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.87%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	1.74%
Inlet	Environmental → Aquatic → Marine → Inlet	0.87%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.57%
Lake	Environmental → Aquatic → Freshwater → Lake	13.91%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.35%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.87%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.87%
Oceanic	Environmental → Aquatic → Marine → Oceanic	4.35%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.74%
Strait	Environmental → Aquatic → Marine → Strait	6.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.87%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.87%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.87%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.87%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	8.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	4.35%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	3.48%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	1.74%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	46.09%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.57%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.87%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	35.65%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	2.61%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.87%
Drinking Water Treatment Plant	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant	0.87%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.87%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.61%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.09%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	4.35%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	7.83%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	1.74%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.87%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.87%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.87%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.87%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.87%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	2.61%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.87%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	8.70%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.87%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.96%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.74%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.48%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.48%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.87%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300001838	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2a	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100590271	3300000116	Marine	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSS
JGI11772J19994_10284393	3300001748	Saline Water And Sediment	MAIQDTFAFLDTNEFGVTCQIGSGDEFVGILDSPMEVIAGGMALTREYLLTAKTS
RCM33_10146912	3300001838	Marine Plankton	MAIQDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYA
Ga0075462_101732751	3300006027	Aqueous	MALSETLAFLNTDEFGTTCQIGSNPEFVGILDSPVDVIAGGMA
Ga0070749_105565251	3300006802	Aqueous	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGT
Ga0070754_103916331	3300006810	Aqueous	MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALSREYLLYAPTS
Ga0075481_102081871	3300006868	Aqueous	MALSETLAFLNTDEFGVTCQIGDGGEFVGILDSPVEVIAGGMALSREYLLYATTSDVSNASRGTSITVDGSAY
Ga0075477_101633324	3300006869	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRG
Ga0075477_103367742	3300006869	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGM
Ga0070746_101721531	3300006919	Aqueous	MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGG
Ga0098046_10886321	3300006990	Marine	MSLQDTFAFLNTDEFGVTCQIGAGADFVGILDSPMDVIAGGMALSREYLLTAKTSD
Ga0075468_101892661	3300007229	Aqueous	MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIAGGVALSREYLLMA
Ga0075460_101389054	3300007234	Aqueous	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLT
Ga0075460_102138941	3300007234	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA
Ga0070745_12592501	3300007344	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLL
Ga0070753_12895031	3300007346	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMA
Ga0099851_12235951	3300007538	Aqueous	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA
Ga0099849_11332814	3300007539	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTS
Ga0099849_13514482	3300007539	Aqueous	MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTSI
Ga0099847_11091951	3300007540	Aqueous	MALSETLAFLNTDEFGTTCRIGDGSDFVGILDSPVDVIAGG
Ga0099848_12671562	3300007541	Aqueous	MAIQDTLAFLNTDEFGVTCSIGASSFVGILDSPMEVLAGGMH*
Ga0099846_12715121	3300007542	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMA
Ga0070751_11644541	3300007640	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMAL
Ga0102954_12828541	3300007778	Water	MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREY
Ga0102829_10429361	3300009026	Estuarine	MAISDTLAFLNTDEFGVTCQIGQSASFVGVLDSPTDLIAGGMALSREYLLLAKTSDVSAT
Ga0103858_101886632	3300009239	River Water	MAIQDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYAKTSDVSAA
Ga0103843_1084351	3300009327	River Water	MALSETLAFLNTDEFGTTCRIGDGDDFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTCLTV
Ga0103826_1026791	3300009338	River Water	MALSETLAFLNTDEFGTTCRIGDGDDFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA
Ga0114919_102603354	3300009529	Deep Subsurface	MAIQDTFAFLDTSEFGVTCQIGSGDEFVGILDSPMEVIAGGMALTREYLLTAKTSDVGSASRG
Ga0114919_104037051	3300009529	Deep Subsurface	MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYL
Ga0129348_12362062	3300010296	Freshwater To Marine Saline Gradient	MALSETLAFLNTDEFGTTCQIGSNPEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRG
Ga0129348_13125831	3300010296	Freshwater To Marine Saline Gradient	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYL
Ga0129345_12457242	3300010297	Freshwater To Marine Saline Gradient	MAIQDTLAFLNVNEFGVTCSIGGSSFVGILDSPVEVLAGG
Ga0129342_12618002	3300010299	Freshwater To Marine Saline Gradient	MALSETLAFLNTDEFGTTCRIGAGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSA
Ga0129342_12785682	3300010299	Freshwater To Marine Saline Gradient	MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAK
Ga0136656_10793781	3300010318	Freshwater To Marine Saline Gradient	MALQDTFAFLNTDEFGVTCQIGAGAEFVGILDSPMEVIAGGMALSREYLLTAKTSDVSALTRGSS
Ga0136656_11678271	3300010318	Freshwater To Marine Saline Gradient	MALSETLAFLNADEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSS
Ga0136656_12008553	3300010318	Freshwater To Marine Saline Gradient	MALSETLAFLNTDEFGTTCQIGSNPEFVGILDSPVDVIAGGMAL
Ga0129333_111074631	3300010354	Freshwater To Marine Saline Gradient	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKT
Ga0114922_111001081	3300011118	Deep Subsurface	MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSR
Ga0119931_10110211	3300011984	Drinking Water Treatment Plant	MAISDTLAFLNVDEFGVTCQIGAGASFVGILDSPMEVLAGG
Ga0129344_12128694	3300012520	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSRE
Ga0129352_110207891	3300012528	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGG
Ga0180057_11260041	3300016697	Freshwater	MAFPELPDAFLNEFGVTCQIGVGTAFLGILDSPMDVIAGGMALSREYLLMAKTSDVSTAARGTSITVDSV
Ga0181364_10536031	3300017701	Freshwater Lake	MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPMDLIAGGMALPREHLLFAKTSDVSDTVRGT
Ga0181412_10677314	3300017714	Seawater	MALEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPMDVIAGGVALSREYLLMAKTSDVSSAAR
Ga0181383_10035601	3300017720	Seawater	MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIAGGVALSREYLLMAKTSDVSSA
Ga0181362_10354193	3300017723	Freshwater Lake	MAISDTLAFLNTDEFGVTCQIGQNASFVGVLDSPTDLI
Ga0181426_10153294	3300017733	Seawater	MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIAG
Ga0181399_11223223	3300017742	Seawater	MALEDTLAFLNTEEFGTTCQINGGSNFVGIFDSPVDVIAGGVALSREYLLMA
Ga0181382_11659641	3300017756	Seawater	MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPVDVIA
Ga0181356_10129784	3300017761	Freshwater Lake	MAITDTLAFLNTDEFGVTCQIGADPSFVGILDSPMEQLAGGMALSREYLLYAKTSDVSATVRGSAITV
Ga0181410_10489854	3300017763	Seawater	MAIEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPMDVIAGGVALSREYLLMAKTSDVSSAARGTSITVAS
Ga0181355_13959831	3300017785	Freshwater Lake	MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPMDLIAGGMALSREYLLLAKTSDVSAAVR
Ga0181577_100085401	3300017951	Salt Marsh	MAIQDTFAFLDTNEFGVTCQIGGGSEFVGILDSPMEVIAGGMALTREYLLTAKT
Ga0181577_106400621	3300017951	Salt Marsh	MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALSREYLLYAPTSDVSSASRGTSITV
Ga0181577_108915312	3300017951	Salt Marsh	MAIQDTFAFLDTNEFGVTCQIGSGDEFVGILDSPMEVIAG
Ga0180434_108543562	3300017991	Hypersaline Lake Sediment	MAIQDTFAFLDTNEFGVTCQIGGGDEFVGILDSPMEVIAGGMALTREYLLTAK
Ga0180434_109808692	3300017991	Hypersaline Lake Sediment	MAIQDTFAFLDTSEFGVTCQIGSGDEFVGILDSPM
Ga0181592_105673191	3300018421	Salt Marsh	MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPV
Ga0181568_112837231	3300018428	Salt Marsh	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTS
Ga0182059_14119152	3300019272	Salt Marsh	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGM
Ga0182073_14474782	3300019274	Salt Marsh	MALSETLAFLNTDEFGVTCQIGYGDEFVGILDSPVDVIAGGVALSREYLLYAPTSDVSSASRGTSI
Ga0181594_102248851	3300020054	Salt Marsh	MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDV
Ga0181594_103408071	3300020054	Salt Marsh	MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALS
Ga0194113_111051472	3300020074	Freshwater Lake	MAIQDTLAFLNVDEFGIACSIGASSFVGILDSPVEVLAGGMALSRE
Ga0194035_10431503	3300020167	Anoxic Zone Freshwater	MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPTDLIAGGMALSREYLLLAKTSDVNAAVRGTAIT
Ga0194134_103400801	3300020179	Freshwater Lake	MAISDTLAFLNVDEFGVTCQIGAGASFVGILDSPMEVLAGGMAL
Ga0181573_102007961	3300020184	Salt Marsh	MAIQDTFAFLDTNEFGVTCQIGGGSEFVGILDSPMEVIAGGMALT
Ga0194128_100490784	3300020197	Freshwater Lake	MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLL
Ga0194132_101900671	3300020214	Freshwater Lake	MAISETLAFLNTNEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYAKTSDVSATARGTA
Ga0194119_106339761	3300020220	Freshwater Lake	MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEVLAGGMALSREYLLYAKTSDVSATARGTSITVDSV
Ga0194129_1001044313	3300020578	Freshwater Lake	MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPMEQLAGGMALTREYLLYAK
Ga0194123_105278011	3300021093	Freshwater Lake	MAISDTLAFLNTDEFGVTCQIGAGASFVGILDSPME
Ga0213866_101802333	3300021425	Seawater	MINDTLAFLSLSEFAVTCQIGAGAEFKGILDSPMDVI
Ga0213866_103614013	3300021425	Seawater	MAIQETLAFLNVDEFGVTCSIGGSSFVGILDSPVEVLAGGMALSREYLLYAKTA
Ga0222718_100127391	3300021958	Estuarine Water	MALSETLAFLNTDEFGTTCQIGSDPEFVGILDSPVDVIAGGM
Ga0224906_10386154	3300022074	Seawater	MALEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPVDVIAGGVALSREYLLMAKTSDVSSAARGTSIT
Ga0224906_11156571	3300022074	Seawater	MALEDTFAFLNTEEFGTTCQIGGGSNFVGILDSPVDVIAG
Ga0212020_10582433	3300022167	Aqueous	MALSETLAFLNTDEFGTTCRIGSNPEFVGILDSPVDVIAGGVALSREYLLYAP
Ga0196899_11131961	3300022187	Aqueous	MALSETLAFLNTDEFGVTCQIGDGDEFVGILDSPVDVIAGGVALSREYLLYAPTSDVSSASRGTSITVGGSAYTV
Ga0196901_10129145	3300022200	Aqueous	MALSETLAFLNADEFGTVCRIGGGDEFVGILDSPVDVIAGGIA
Ga0196901_11065354	3300022200	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTSI
Ga0196901_11540043	3300022200	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTA
(restricted) Ga0233425_104320831	3300024054	Freshwater	MAISDTLPFLNTNEFGVTCQIGAGASFVGVLDSPMDVIAGGMAL
Ga0209992_101846323	3300024344	Deep Subsurface	MAIQDTFAFLDTNEFGVTCQIGSGSEFVGILDSPMEVIAGGMA
Ga0208148_10236051	3300025508	Aqueous	MALEDTFAFLNTEEFGTTCQIGSGSNFVGILDSPMDVIAGG
Ga0208303_10882021	3300025543	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDVS
Ga0208303_10959813	3300025543	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTA
Ga0208161_10388734	3300025646	Aqueous	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSR
Ga0208160_10393811	3300025647	Aqueous	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGGMALSREYLLTAKTSD
Ga0208160_10609244	3300025647	Aqueous	MALQDTFAFLNTDEFGVTCQIGAGAEFVGILDSPMEVIAGGMALSREYLLT
Ga0208428_10615561	3300025653	Aqueous	MALSETLAFLNTDEFGVTCQIGDGGEFVGILDSPVEVIAGG
Ga0208795_11223053	3300025655	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVS
Ga0208162_10978861	3300025674	Aqueous	MALSETLAFLNADEFGTTCQIGSDPEFVGILDSPVDVIAGGMALSREYLLTAKTSDV
Ga0208162_12001362	3300025674	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALS
Ga0208019_10847974	3300025687	Aqueous	MALSETLAFLNTDEFGTTCRIGEGTEFVGILDSPVDVIAGGMALSREYLLTAKTSDV
Ga0208019_11522421	3300025687	Aqueous	MALSETLAFLNTDEFGVTCQIGAGASFVGILDSPVDVIAGG
Ga0208767_12541281	3300025769	Aqueous	MALQDTFAFLNTDEFGITCQIGAGAEFVGILDSPMEVI
Ga0208427_10525994	3300025771	Aqueous	MALQDTFAFLNTDEFGITCQIGAGAEFVGILDSPMEVIAGGMALSREYLLI
Ga0209182_101813552	3300025843	Lake Sediment	MAIADTFAFLNTDEFGVTCQIGAGQSFVGILDSPMEQLAGGMALTREY
Ga0209354_103362862	3300027808	Freshwater Lake	MAISDTLAFLNTNEFGITCQIGAGASFVGVLDSPMDLIAGGMALSREYLLLAKTSDVS
(restricted) Ga0233415_100413861	3300027861	Seawater	MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYLLTAKASDV
Ga0209635_103981824	3300027888	Marine Sediment	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIA
(restricted) Ga0247834_10118639	3300027977	Freshwater	MAISDTLTFLNIDEFGVTCQIGAGASFVGVLDSPMDVIAGGMALSREYMLLAKTSDVSA
(restricted) Ga0233418_103319242	3300027995	Sediment	MAISDTLAFLNVDEFGVTCQIGQGSSFVGILDSPME
Ga0256368_10407061	3300028125	Sea-Ice Brine	MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYLLTAKASDVSALTRGSSIPS
Ga0307376_104592021	3300031578	Soil	MAIADTLAFLNTDEFGVTCQIGAGPSFVGILDSPMEQLAGGMALTREYLLYAKTSDVSAT
Ga0307377_100826611	3300031673	Soil	MAIADTLAFLNTDEFGVTCQIGAGASFVGILDSPMEQLAGGMAL
Ga0307377_101486004	3300031673	Soil	MSLQDTFAFLNTDEFGVTCQIGAGDDFVGILDSPMDVIAGGMALSREYLLTAKASDVSALTRGSSITVASAA
Ga0307377_102807811	3300031673	Soil	MAIQDTLAFLNINEFGITCSIGGSSFVGILDSPVDVIAGGMALSREYSLLAKTSDVSS
Ga0315274_118931371	3300031999	Sediment	MAIADTFAFLNTDEFGVTCQIDAGQSFVGILDSPMEQLAGGMALTREYLLYAKT
Ga0315283_123864031	3300032164	Sediment	MAITDTLAFLNTDEFGVTCQIGADPSFVGILDSPMEQLAGGMALTREYLLYAKTSDVSATVRGSAI
Ga0315273_131019762	3300032516	Sediment	MAITDTLAFLNTDEFGVTCQIGADPSFVGILDSPMEQLAGGMALSREYLLYAKTSDVSATVRGS
Ga0348337_090471_2_199	3300034418	Aqueous	MALSETLAFLNTDEFGTTCRIGEGAEFVGILDSPVDVIAGGMALSREYLLTAKTSDVSSASRGTSI

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters