Metagenome Family F079792

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079792
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	79 residues
Representative Sequence	MKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQAVEVDPDDSDLQNAVADRLTELAARKRDWTR
Number of Associated Samples	92
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	22.61 %
% of genes near scaffold ends (potentially truncated)	33.04 %
% of genes from short scaffolds (< 2000 bps)	89.57 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (51.304 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (13.913 % of family members)
Environment Ontology (ENVO)	Unclassified (44.348 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.47% β-sheet: 0.00% Coil/Unstructured: 49.53%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.0: automated matches	d7o6ea_	7o6e	0.61425
a.25.1.1: Ferritin	d2fjca1	2fjc	0.61421
a.25.1.1: Ferritin	d1moja_	1moj	0.61296
a.25.1.1: Ferritin	d3t9ja_	3t9j	0.61282
a.25.1.1: Ferritin	d1nfva_	1nfv	0.60991

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02567	PhzC-PhzF	4.35
PF09917	DUF2147	2.61
PF02639	DUF188	2.61
PF06325	PrmA	1.74
PF01292	Ni_hydr_CYTB	1.74
PF10503	Esterase_PHB	1.74
PF13463	HTH_27	1.74
PF07589	PEP-CTERM	1.74
PF08548	Peptidase_M10_C	1.74
PF05960	DUF885	1.74
PF00005	ABC_tran	0.87
PF07536	HWE_HK	0.87
PF00248	Aldo_ket_red	0.87
PF03600	CitMHS	0.87
PF01053	Cys_Met_Meta_PP	0.87
PF14534	DUF4440	0.87
PF02518	HATPase_c	0.87
PF04575	SlipAM	0.87
PF13167	GTP-bdg_N	0.87
PF00202	Aminotran_3	0.87
PF03734	YkuD	0.87
PF12706	Lactamase_B_2	0.87
PF07485	DUF1529	0.87
PF01431	Peptidase_M13	0.87
PF08212	Lipocalin_2	0.87
PF02592	Vut_1	0.87
PF05050	Methyltransf_21	0.87
PF00486	Trans_reg_C	0.87
PF01042	Ribonuc_L-PSP	0.87
PF13474	SnoaL_3	0.87
PF00196	GerE	0.87
PF07568	HisKA_2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	4.35
COG1671	Uncharacterized conserved protein YaiI, UPF0178 family	Function unknown [S]	2.61
COG2264	Ribosomal protein L11 methylase PrmA	Translation, ribosomal structure and biogenesis [J]	1.74
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.74
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	1.74
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	1.74
COG3897	Protein N-terminal and lysine N-methylase, NNT1/EFM7 family	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	1.74
COG3038	Cytochrome b561	Energy production and conversion [C]	1.74
COG2931	Ca2+-binding protein, RTX toxin-related	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.74
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	1.74
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	1.74
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	1.74
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.87
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.87
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.87
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.87
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.87
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.87
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.87
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG3040	Bacterial lipocalin Blc	Cell wall/membrane/envelope biogenesis [M]	0.87
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	0.87
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.87
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.87
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.87
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.87
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
All Organisms	root	All Organisms	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
cellular organisms	root	All Organisms → cellular organisms	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	32.17 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	26.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	25.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	6.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %
Sphingomonas sediminicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola	0.87 %
Sphingomonas sabuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sabuli	0.87 %
Sphingomonas glaciei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas glaciei	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.30 %
Sphingomonas sp. URHD0057	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	2.61 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1.74 %
Sphingomonas sp. SM33	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SM33	1.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.74 %
Sphingomonas sp. NSE70-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. NSE70-1	0.87 %
Sphingomonas sediminicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola	0.87 %
Sphingomonas sabuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sabuli	0.87 %
Sphingomonas glaciei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas glaciei	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0568043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1072	Open in IMG/M
3300003319\|soilL2_10136996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1153	Open in IMG/M
3300004081\|Ga0063454_102039397	Not Available	508	Open in IMG/M
3300004114\|Ga0062593_100051117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2577	Open in IMG/M
3300004156\|Ga0062589_100106521	Not Available	1802	Open in IMG/M
3300004157\|Ga0062590_100174913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1512	Open in IMG/M
3300004463\|Ga0063356_100470757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1648	Open in IMG/M
3300004463\|Ga0063356_100980135	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300004463\|Ga0063356_101428846	Not Available	1020	Open in IMG/M
3300004463\|Ga0063356_104324348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SM33	611	Open in IMG/M
3300004463\|Ga0063356_105400049	Not Available	549	Open in IMG/M
3300004463\|Ga0063356_105493204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	544	Open in IMG/M
3300004480\|Ga0062592_100041266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2410	Open in IMG/M
3300004643\|Ga0062591_100697747	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300005093\|Ga0062594_100002644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4790	Open in IMG/M
3300005093\|Ga0062594_100590766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	970	Open in IMG/M
3300005093\|Ga0062594_100822739	Not Available	863	Open in IMG/M
3300005184\|Ga0066671_10163204	Not Available	1310	Open in IMG/M
3300005288\|Ga0065714_10334835	Not Available	636	Open in IMG/M
3300005290\|Ga0065712_10576847	Not Available	603	Open in IMG/M
3300005293\|Ga0065715_10139338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1878	Open in IMG/M
3300005293\|Ga0065715_10613218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	700	Open in IMG/M
3300005327\|Ga0070658_10526205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1022	Open in IMG/M
3300005327\|Ga0070658_11833578	Not Available	524	Open in IMG/M
3300005331\|Ga0070670_100271030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	1481	Open in IMG/M
3300005335\|Ga0070666_11455395	Not Available	512	Open in IMG/M
3300005336\|Ga0070680_101427672	Not Available	599	Open in IMG/M
3300005339\|Ga0070660_100683143	Not Available	860	Open in IMG/M
3300005344\|Ga0070661_100916967	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005344\|Ga0070661_101868632	Not Available	510	Open in IMG/M
3300005353\|Ga0070669_100326717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1240	Open in IMG/M
3300005353\|Ga0070669_101283825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SM33	634	Open in IMG/M
3300005354\|Ga0070675_101083319	Not Available	737	Open in IMG/M
3300005355\|Ga0070671_100128086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2137	Open in IMG/M
3300005356\|Ga0070674_101097496	Not Available	702	Open in IMG/M
3300005364\|Ga0070673_100273622	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300005366\|Ga0070659_101710659	Not Available	563	Open in IMG/M
3300005367\|Ga0070667_100321531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	1396	Open in IMG/M
3300005438\|Ga0070701_11270084	Not Available	525	Open in IMG/M
3300005457\|Ga0070662_101811227	Not Available	527	Open in IMG/M
3300005458\|Ga0070681_10653541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	966	Open in IMG/M
3300005458\|Ga0070681_11975208	Not Available	511	Open in IMG/M
3300005543\|Ga0070672_100091751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2451	Open in IMG/M
3300005547\|Ga0070693_100975917	Not Available	639	Open in IMG/M
3300006804\|Ga0079221_10812682	Not Available	672	Open in IMG/M
3300006806\|Ga0079220_10655246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	760	Open in IMG/M
3300009168\|Ga0105104_10496153	Not Available	687	Open in IMG/M
3300009177\|Ga0105248_10125636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2894	Open in IMG/M
3300009177\|Ga0105248_10208837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	2200	Open in IMG/M
3300010229\|Ga0136218_1000041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	29628	Open in IMG/M
3300010322\|Ga0134084_10283512	Not Available	610	Open in IMG/M
3300012212\|Ga0150985_108679138	Not Available	798	Open in IMG/M
3300012913\|Ga0157298_10275346	Not Available	583	Open in IMG/M
3300012915\|Ga0157302_10107759	Not Available	890	Open in IMG/M
3300012951\|Ga0164300_10271006	Not Available	873	Open in IMG/M
3300012955\|Ga0164298_11173253	Not Available	580	Open in IMG/M
3300012958\|Ga0164299_10871014	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012961\|Ga0164302_10296853	Not Available	1053	Open in IMG/M
3300012977\|Ga0134087_10335212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	718	Open in IMG/M
3300012989\|Ga0164305_11005584	Not Available	709	Open in IMG/M
3300013102\|Ga0157371_10392352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas glaciei	1015	Open in IMG/M
3300013102\|Ga0157371_10566671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	843	Open in IMG/M
3300013306\|Ga0163162_11080942	Not Available	909	Open in IMG/M
3300014325\|Ga0163163_10925883	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300014969\|Ga0157376_11242783	Not Available	774	Open in IMG/M
3300015371\|Ga0132258_12736686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1230	Open in IMG/M
3300015371\|Ga0132258_12777295	Not Available	1220	Open in IMG/M
3300015374\|Ga0132255_102060606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	869	Open in IMG/M
3300018084\|Ga0184629_10383246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. NSE70-1	739	Open in IMG/M
3300018469\|Ga0190270_12007449	Not Available	637	Open in IMG/M
3300018476\|Ga0190274_10638277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1098	Open in IMG/M
3300018476\|Ga0190274_10791205	Not Available	1005	Open in IMG/M
3300018481\|Ga0190271_10226266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1885	Open in IMG/M
3300022756\|Ga0222622_10612518	Not Available	787	Open in IMG/M
3300022756\|Ga0222622_11025414	Not Available	606	Open in IMG/M
3300022883\|Ga0247786_1089045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	659	Open in IMG/M
3300025903\|Ga0207680_10561278	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300025904\|Ga0207647_10498178	Not Available	679	Open in IMG/M
3300025909\|Ga0207705_10088161	All Organisms → cellular organisms → Bacteria	2269	Open in IMG/M
3300025909\|Ga0207705_10798103	Not Available	733	Open in IMG/M
3300025909\|Ga0207705_10998561	Not Available	647	Open in IMG/M
3300025912\|Ga0207707_10673652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	870	Open in IMG/M
3300025917\|Ga0207660_11178169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sabuli	624	Open in IMG/M
3300025919\|Ga0207657_10742194	Not Available	761	Open in IMG/M
3300025920\|Ga0207649_11433655	Not Available	546	Open in IMG/M
3300025921\|Ga0207652_10783507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	847	Open in IMG/M
3300025923\|Ga0207681_10247192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1391	Open in IMG/M
3300025925\|Ga0207650_10245779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057	1447	Open in IMG/M
3300025926\|Ga0207659_10796717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	812	Open in IMG/M
3300025930\|Ga0207701_10160746	Not Available	1988	Open in IMG/M
3300025931\|Ga0207644_10006939	All Organisms → cellular organisms → Bacteria → Proteobacteria	7374	Open in IMG/M
3300025931\|Ga0207644_10107796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2102	Open in IMG/M
3300025931\|Ga0207644_11683492	Not Available	531	Open in IMG/M
3300025933\|Ga0207706_11596784	Not Available	529	Open in IMG/M
3300025941\|Ga0207711_10044486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	3790	Open in IMG/M
3300025941\|Ga0207711_10473076	Not Available	1167	Open in IMG/M
3300025945\|Ga0207679_10138015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1966	Open in IMG/M
3300025960\|Ga0207651_10251976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1445	Open in IMG/M
3300025960\|Ga0207651_11142150	Not Available	699	Open in IMG/M
3300025986\|Ga0207658_10564803	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300026088\|Ga0207641_12102832	Not Available	565	Open in IMG/M
3300026142\|Ga0207698_12237801	Not Available	559	Open in IMG/M
3300028587\|Ga0247828_10233461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola	978	Open in IMG/M
3300028590\|Ga0247823_11206016	Not Available	567	Open in IMG/M
3300028592\|Ga0247822_11468782	Not Available	575	Open in IMG/M
3300031547\|Ga0310887_10839260	Not Available	579	Open in IMG/M
3300031731\|Ga0307405_10672660	Not Available	854	Open in IMG/M
3300031824\|Ga0307413_10685961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	849	Open in IMG/M
3300031852\|Ga0307410_10616740	Not Available	906	Open in IMG/M
3300031854\|Ga0310904_11421192	Not Available	505	Open in IMG/M
3300031901\|Ga0307406_10762038	Not Available	813	Open in IMG/M
3300031908\|Ga0310900_10121388	Not Available	1717	Open in IMG/M
3300031939\|Ga0308174_11877487	Not Available	515	Open in IMG/M
3300031995\|Ga0307409_100194026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1810	Open in IMG/M
3300032074\|Ga0308173_11982760	Not Available	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.52%
Environmental	Environmental	42.61%
Engineered	Engineered	0.87%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.52%
Terrestrial	Environmental → Terrestrial	39.13%
Aquatic	Environmental → Aquatic	3.48%
Lab Enrichment	Engineered → Lab Enrichment	0.87%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.00%
Soil	Environmental → Terrestrial → Soil	39.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.65%
Sediment	Environmental → Aquatic → Sediment	2.61%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Roots	Host-Associated → Plants → Roots	0.87%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	29.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.70%
Loam	Environmental → Terrestrial → Soil → Loam	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	29.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.70%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	13.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	12.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.22%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010229	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1	Engineered	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_05680431	3300000033	Soil	MVSESAPMIDAATWARRCHIEAARAIHPSTKAFLLELAAEFEAICGEAVNLDPDDTELQSAVADRLAEVAAKKREWLR*
soilL2_101369962	3300003319	Sugarcane Root And Bulk Soil	MTKSCRAGFDNPAEWARRCHIEARRAIHPATKAFLLELAAAFEAASGRAVDIDPDDADLQKAVADRLNEVARRGWNG*
Ga0063454_1020393971	3300004081	Soil	VYPDYRHALGGLAHLMPNARAGSLITDAADWARRCHIEAARAMHPSTKAFLLKLAAEYEAISGEAVNLDPDDSDLQNAVADRLATLAAKTRAWIH*
Ga0062593_1000511173	3300004114	Soil	TMKIPAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0062589_1001065213	3300004156	Soil	MAKIPAGSPLTHPVEWARRCRIEAARAIHPSTKAFILELAAQFEAMAGETVNLHPDDPELQDAVAERLSEIAAKTREWRR*
Ga0062590_1001749133	3300004157	Soil	SRVTMKIPAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0063356_1004707572	3300004463	Arabidopsis Thaliana Rhizosphere	MAKNPNGSPLEDAAEWARKCRVEAVRAIHPTTKEFLLGLAAHYDAISGEKGNLDPDDVELQNAVADRLAALAAQRREWMK*
Ga0063356_1009801352	3300004463	Arabidopsis Thaliana Rhizosphere	MAEVSRVNPMLDDPAEWARRCRIEAARAIHPDTKAFLLELTARFEAASGQAVIIDPDDTELQTAVADRLFEIAKRRWAK*
Ga0063356_1014288462	3300004463	Arabidopsis Thaliana Rhizosphere	MAKDSAVTALTDPLEWARRCRIEAVRAIHPSTKAFLLELAEQFEAIAGETANLNPDDPELQNAVAERLAEISAREREWRR*
Ga0063356_1043243481	3300004463	Arabidopsis Thaliana Rhizosphere	MAEVRPGSLSVDPAGWARRCRIEAVRAIHPSTKAFLEELAAEFEAMAGEVVDLDPDDPDLQGALADRLAEVAARDRSRPR*
Ga0063356_1054000491	3300004463	Arabidopsis Thaliana Rhizosphere	MVSESAPMIDAAAWARRCHIEAARAIHPFTKAFLLELAAEFEAICGEAVNLDPDDTELQSAVADRLAEVAAKKREWLR*
Ga0063356_1054932041	3300004463	Arabidopsis Thaliana Rhizosphere	NDRKGSPLEDAAGWARKCRIEAVRAIHPSTKKFLLDLAAKYEDLSGEIVKLDPDDVELQNAVADRLAVLAAQRREWMK*
Ga0062592_1000412662	3300004480	Soil	MKIPAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0062591_1006977472	3300004643	Soil	MLDDPAEWARRCRIEAARAIHPDTKAFLLELTARFEAASGQAVMIDPDDTELQTAVADRLFEIAKRRWAK*
Ga0062594_1000026444	3300005093	Soil	MDDPTNWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE*
Ga0062594_1005907662	3300005093	Soil	MAEVRPKSLSVDPLGWARRCRIEAVRAIHPSTKAFLAELAAEFEAMAGEVVDLDPDDPDLQGALADRLAEIAARDRARSR*
Ga0062594_1008227392	3300005093	Soil	MASGVARITDPEGWARRCRIEAARAMHPGVKASLLELAAEFEAISGEAAFLDPDDPELQNAVAERLAEVAATRR*
Ga0066671_101632041	3300005184	Soil	MSKAPLSNPQDDPAEWSRRCRIEAVRAIHPKTKAFLLDLASRYEALAGEKVTLDPDDADLQNALADRLAEVAARRTL*
Ga0065714_103348352	3300005288	Miscanthus Rhizosphere	MSKAPAGDPLTHPAEWARRCRIEAVRAIHPMTKAFLLDLATRFEALAGETVNLNPDDPEVQNALADRLAEVAARRGHLKR*
Ga0065712_105768471	3300005290	Miscanthus Rhizosphere	PAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0065715_101393381	3300005293	Miscanthus Rhizosphere	MKIPAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAA
Ga0065715_106132181	3300005293	Miscanthus Rhizosphere	RVTMKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQVVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0070658_105262052	3300005327	Corn Rhizosphere	VKVPAGNLLTHPTEWARGCRIEAARAIHPLTKAFLLELAAQLENVAGKAVDLDPDDKDLQQAVADRLAELAARKRDWTRQA*
Ga0070658_118335781	3300005327	Corn Rhizosphere	EWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL*
Ga0070670_1002710301	3300005331	Switchgrass Rhizosphere	MAKDPSGTLLSHPAEWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL*
Ga0070666_114553951	3300005335	Switchgrass Rhizosphere	MAKGPSGSLFSHPAEWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL*
Ga0070680_1014276721	3300005336	Corn Rhizosphere	MKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQAVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0070660_1006831431	3300005339	Corn Rhizosphere	MAKAPSGNPITAPAEWARRCRIEAARAIHPSTKAFLLELAAEYEAISGETVNLDPDDTDLQNAVADRLAALAAKRRAWMR*
Ga0070661_1009169672	3300005344	Corn Rhizosphere	LLSHPAEWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL*
Ga0070661_1018686321	3300005344	Corn Rhizosphere	MSTLATDPLGWARRCRIEAARAIHPLTKAFLTELAAHFEELAGATADLDPDDPDLQKAVADRLAEVAARERTNWLER*
Ga0070669_1003267173	3300005353	Switchgrass Rhizosphere	NPVTHPAEWARRCRIEAARAIHPMTKAFLLDLAGKFEAIAGEPVSLDPDDIDLQNAVADRLAELAARRSEEAR*
Ga0070669_1012838251	3300005353	Switchgrass Rhizosphere	MAKDQNGSPLDAAADWARKCRIEAVRAIHPSTKEFLLELAANYEAISGEVVNLDPDDVELQNAVVDRFAVLAAQRREWIK*
Ga0070675_1010833191	3300005354	Miscanthus Rhizosphere	MKIPSGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQEVEVDPDDGDLQNAVADRLTELAARKRDWTR*
Ga0070671_1001280863	3300005355	Switchgrass Rhizosphere	MSNHISDPLGWARRCRIESTRAIHPSTKAFLLELASQFEEVAGKTVNLDPDDPDLQNAVADRLAELAARIRNSGGR*
Ga0070674_1010974962	3300005356	Miscanthus Rhizosphere	DPPHLIGLMVKAPAGNPLTHPMEWARRCRIEAARAIHPSTKSFLLVLATEFEELAGEAVNLDPDDSDLQNAVGDRLTELAARKRHWTR*
Ga0070673_1002736222	3300005364	Switchgrass Rhizosphere	MAKDPSGTLLSHPAEWARRCRIEAARAIHPSTKTFLIDLAAEFEAIAGETVNLDPDDIELQNAVAERLAELAARRRDWKL*
Ga0070659_1017106592	3300005366	Corn Rhizosphere	MKIPSGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0070667_1003215313	3300005367	Switchgrass Rhizosphere	MAKDPSGTLLSHPAEWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWK
Ga0070701_112700841	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	NWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE*
Ga0070662_1018112271	3300005457	Corn Rhizosphere	MDDPTNWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTEDPDDPDLQNAVADRLAFLAAKRRAWVREE*
Ga0070681_106535412	3300005458	Corn Rhizosphere	MIDAAAWARRCHIEAARAIHPFTKAFLLELAAEFEAICGEAVNLDPDDTELQSAVADRLAEVAAKKREWLR*
Ga0070681_119752081	3300005458	Corn Rhizosphere	LGYLARLMAKPRSGNPVTAPAEWARRCRIEAARAIHPSTKAFLLDLAAEYEAISGETVNLHPDDSDLQNAVADRLATLAAKRSAWMH*
Ga0070672_1000917512	3300005543	Miscanthus Rhizosphere	MDDPANWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE*
Ga0070693_1009759171	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAEARTGNPVSAPAEWARRCHIEAARAIHPATRAFLLELAAEYEAIAGETVNLDPDDIDLQSAVADRLAALAAKRREWMR*
Ga0079221_108126821	3300006804	Agricultural Soil	MVKVRRANPLLDHSEWARRCRIEAARAIHPSTKSFLLELATEFEAASGETVKLDPDDPDLQNAVADRLAEVAARRWPH*
Ga0079220_106552462	3300006806	Agricultural Soil	RRMVKVRRANPLLDHSEWARRCRIEAARAIHPSTKSFLLELATEFEAASGETVKLDPDDPDLQNAVADRLAEVAARRWPH*
Ga0105104_104961531	3300009168	Freshwater Sediment	RRCRIEAARAIHPSTKTFLLDLATQFEDLAGEAVDLDPDDPELQNAVGERLTELAARKKHWTR*
Ga0105248_101256364	3300009177	Switchgrass Rhizosphere	VKVPAGNLLTHPTEWARGCRIEAARAIHPLTKAFLLELAAQLENVAGKAVYLDPDDTDLQQAVADRLAELAARKRDWTRQA*
Ga0105248_102088373	3300009177	Switchgrass Rhizosphere	MAKGPSGSLFSHPAEWARRCRIEAARAIHPSTKTFLIDLAAEFEAIAGETVNLDPDDIELQNAVAERLAELAARRRDWKL*
Ga0136218_100004130	3300010229	Soil	MIDAAAWARRCHIEAARAIHPSTKAFLLELAAEFEAICGEAVNLDPNDTELQSAVADRLAEVAAKKREWLR*
Ga0134084_102835121	3300010322	Grasslands Soil	MFRVFIPIAVRLPGELIRTMANERARSLITDAAPWARRCHIEAARAIHPSTKAFLLELAAEYEALSGETVDVDPDDTELQNAVADRLAELAAKRRAWFR*
Ga0150985_1086791382	3300012212	Avena Fatua Rhizosphere	LEPNKPERKLDATAWARRCRIEAVRAIHPSTKAFLLELAAELEAVSGEVVNVDPDDTELQNAVADRLAAVAATRRN*
Ga0157298_102753461	3300012913	Soil	MKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0157302_101077593	3300012915	Soil	MKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQEVEVDPDDGDLQNAVADRLTELAARKRDWTR*
Ga0164300_102710062	3300012951	Soil	MGFVPDCGEDPPHLIGLMVKAPAGNPLTHPMEWARRCRIEAARAIHPSTKSFLLILATEFEELAGEAVNLDPDDSDLQNAVGDRLTELAARKRHWTR*
Ga0164298_111732531	3300012955	Soil	MGFVPDCGEDPPHLIGLMVKAPAGNPLTHPMEWARRCRIEAARAIHPSTKSFLLILATEFEELPGEAVNLEPDDSDIQNEVGYRLTELAARK
Ga0164299_108710141	3300012958	Soil	MDDPANWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTEDPDDPDLQNAVADRLAFLAAKRRAWVREE*
Ga0164302_102968533	3300012961	Soil	MDDPTNWARRCRIEAMRATHPSTKAFLLELAVEYETLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE*
Ga0134087_103352121	3300012977	Grasslands Soil	MPNARAGSLITDAADWARRCHIEAARAMHPSTKAFLLKLAAEYEAISGEAVNLDPDDSDLQNAVADRLATLAAKTRAWIH*
Ga0164305_110055842	3300012989	Soil	MGFVPDCGEDPPHLIGLMVKAPAGNPLTHPMEWARRCRIEAARAIHPSTKSFLLVLATEFEELAGEAVNLDPDDSDLQNAVGDRLTELAARKRHWTR*
Ga0157371_103923521	3300013102	Corn Rhizosphere	MANSPPGNPVTHPADWARRCRIEAARAIHPSTKAFLLDLAAQYEAIAGETVDLDPDDTELQNAVAERLAELAARRREWMR*
Ga0157371_105666712	3300013102	Corn Rhizosphere	MKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQVVEVDPDDSDLQNAVADRLTELAARKRDWTR*
Ga0163162_110809422	3300013306	Switchgrass Rhizosphere	MAKGPSGSLFSHPAEWARRCRIEAARAIHPSTKTFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL*
Ga0163163_109258832	3300014325	Switchgrass Rhizosphere	SGSLFSHPAEWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL*
Ga0157376_112427831	3300014969	Miscanthus Rhizosphere	MGKPATDAVGWARRCRIESARAIHPTTRAFLDELAAHFEQLAGSPAEIDPDDPDLQQAVADRLAEVAAREWVKQRAH*
Ga0132258_127366861	3300015371	Arabidopsis Rhizosphere	VPNKDALEWARICRLEAAKATLPNTKAFLLELAAEYEEIAGQIVQIDFDDPWLQDAVASRLSALAAKRKAWMSRES*
Ga0132258_127772952	3300015371	Arabidopsis Rhizosphere	VKVPAGNLLTHPTEWARGCRIEAARAIHPLTKAFLLELAAQLENVAGKAVYLDPDDKDLQQAVADRLAELAARKRDWTRQA*
Ga0132255_1020606061	3300015374	Arabidopsis Rhizosphere	LEWARRCHIEARRAIHPSTKMFLLELTAQFEALAGETVKLDPDDPELQQAVADRLAEIAAKKREWTR*
Ga0184629_103832461	3300018084	Groundwater Sediment	MAKGPAGNPLTHPIEWARRCRVEAARAIHPSTKAFLLELAEQFEAIAGETVNLSPDDPELQNAVAERLAEVAVRKGEWMR
Ga0190270_120074491	3300018469	Soil	MANDRKGSPLEDAAGWARKCRIEAVRAIHPSTKKFLLDLAAKYEDLSGEIVKLDPDDVELQNAVADRLAVLAAQRREWMK
Ga0190274_106382773	3300018476	Soil	MATDRKGSPLEDAAGWARKCRIEAVRAIHPSTKKFLLDLAAKYEDLSGEIVKLDPDDVELQNAVADRLAVLAAQRREWMK
Ga0190274_107912053	3300018476	Soil	MASGSAGNPFIHSFEWARRCRIEAARAIHPSTKAFLLELAEHFETVAGETVTLNPDDPELQNAVAERLIEIAARKREWLR
Ga0190271_102262662	3300018481	Soil	MTSGSAGNPLIHSFEWARRCRIEAARAIHPSTKAFLLELAEHFETVAGETVTLNPDDPELQNAVAERLIEIAARKREWLR
Ga0222622_106125182	3300022756	Groundwater Sediment	NIPAGNPLTHPAHWARRCRIEAARAIHPSTKDFLLDLAKRFEAIAGEEVSVDPDDTELQDAVADRLSELAARKKDWTR
Ga0222622_110254142	3300022756	Groundwater Sediment	MGFVPDCGEDPPHLIGLMVKAPAGNPLTHPMEWARRCRIEAARAIHPSTKSFLLVLATEFEELAGEAVNLDPDDSDLQNAVGDRLTELAARKRH
Ga0247786_10890451	3300022883	Soil	MKIPAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR
Ga0207680_105612781	3300025903	Switchgrass Rhizosphere	DLSRVTMKIPAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR
Ga0207647_104981782	3300025904	Corn Rhizosphere	MDDPTNWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE
Ga0207705_100881612	3300025909	Corn Rhizosphere	VKVPAGNLLTHPTEWARGCRIEAARAIHPLTKAFLLELAAQLENVAGKAVYLDPDDTDLQQAVADRLAELAARKRDWTRQA
Ga0207705_107981031	3300025909	Corn Rhizosphere	MKIPAGNPLAHPAEWARRCRIEAARAIHPSTKEFLLELAAQFEAIAGQQVSLDPDDTDLQNAVADRLSELAARKRDWS
Ga0207705_109985611	3300025909	Corn Rhizosphere	MGFVPDCGEDPPHLIGLMVKAPAGNPLTHPMEWARRCRIEAARAIHPSTKSFLLVLATEFEELAGEAVNLDPDDSDLQNAVGDRLTELAARKRHWTR
Ga0207707_106736522	3300025912	Corn Rhizosphere	VPPTMVSESAPMIDAAAWARRCHIEAARAIHPFTKAFLLELAAEFEAICGEAVNLDPDDTELQSAVADRLAEVAAKKREWLR
Ga0207660_111781691	3300025917	Corn Rhizosphere	SAPMIDAAAWARRCHIEAARAIHPFTKAFLLELAAEFEAICGEAVNLDPDDTELQSAVADRLAEVAAKKREWLR
Ga0207657_107421942	3300025919	Corn Rhizosphere	MAKDPSGTLLSHPAEWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL
Ga0207649_114336552	3300025920	Corn Rhizosphere	HVMDDPANWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE
Ga0207652_107835071	3300025921	Corn Rhizosphere	SGPRRVPPTMVSESAPMIDAAAWARRCHIEAARAIHPFTKAFLLELAAEFEAICGEAVNLDPDDTELQSAVADRLAEVAAKKREWLR
Ga0207681_102471923	3300025923	Switchgrass Rhizosphere	MAKIPAGSPLTHPVEWARRCRIEAARAIHPSTKAFILELAAQFEAMAGETVNLHPDDPELQDAVAERLSEIAAKTREWRR
Ga0207650_102457791	3300025925	Switchgrass Rhizosphere	LSHPAEWARRCRIEAARAIHPSTKAFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARRRDWKL
Ga0207659_107967172	3300025926	Miscanthus Rhizosphere	MKIPSGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQEVEVDPDDGDLQNAVADRLTELAARKRDWTR
Ga0207701_101607463	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MGFVPDCGEDPPHLIGLMVKAPAGNPLTHPMEWARRCRIEAARAIHPSTKSFLLILATEFEELAGEAVNLDPDDSDLQNAVGDRLTELAARKRHWTR
Ga0207644_100069398	3300025931	Switchgrass Rhizosphere	MDDPANWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE
Ga0207644_101077963	3300025931	Switchgrass Rhizosphere	MSNHISDPLGWARRCRIESTRAIHPSTKAFLLELASQFEEVAGKTVNLDPDDPDLQNAVADRLAELAARIRNSGGR
Ga0207644_116834921	3300025931	Switchgrass Rhizosphere	WARGCRIEAARAIHPLTKAFLLELAAQLENVAGKAVDLDPDDKDLQQAVADRLAELAARKRDWTRQA
Ga0207706_115967842	3300025933	Corn Rhizosphere	MDDPTNWARRCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTEDPDDPDLQNAVADRLAFLAAKRRAWVREE
Ga0207711_100444861	3300025941	Switchgrass Rhizosphere	GPSGSLFSHPAEWARRCRIEAARAIHPSTKTFLIDLAAEFEAIAGETVNLDPDDIELQNAVAERLAELAARRRDWKL
Ga0207711_104730761	3300025941	Switchgrass Rhizosphere	LTHPTEWARGCRIEAARAIHPLTKAFLLELAAQLENVAGKAVYLDPDDTDLQQAVADRLAELAARKRDWTRQA
Ga0207679_101380153	3300025945	Corn Rhizosphere	MKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQAVEVDPDDSDLQNAVADRLTELAARKRDWTR
Ga0207651_102519763	3300025960	Switchgrass Rhizosphere	MAKDPSGTLLSHPAEWARRCRIEAARAIHPSTKTFLIDLAAEFEAIAGETVNLDPDDTELQNAVAERLAELAARKRDWKL
Ga0207651_111421502	3300025960	Switchgrass Rhizosphere	MKIPAGNPLTHPAEWARRCRIEAARAIHPSTKAFLLELAAQFESIAGQEVEVDPDDGDLQNAVADRLTELAARKRDWTR
Ga0207658_105648032	3300025986	Switchgrass Rhizosphere	MDDPTNWARKCRIEAMRATHPSTKAFLLELAVEYEKLAGEAVTQDPDDPDLQNAVADRLAFLAAKRRAWVREE
Ga0207641_121028321	3300026088	Switchgrass Rhizosphere	MAKGPSGSLFSHPAEWARRCRIEAARAIHPSTKTFLIDLAAEFEAIAGETVNLDPDDIELQNAVAERLAELAARRRDWKL
Ga0207698_122378011	3300026142	Corn Rhizosphere	LVVKVPAGNLLTHPTEWARGCRIEAARAIHPLTKAFLLELAAQLENVAGKAVYLDPDDKDLQQAVADRLAELAARKRDWTRQA
Ga0247828_102334612	3300028587	Soil	MANDRKGSPLEDAAGWARKCRIEAVRAIHPSTKKFLLDLAAKYEDLSGEIVKLDPDDVELQNAVADRLAVLAAQRREWLK
Ga0247823_112060162	3300028590	Soil	MTSGSAGNPLIHSFEWARRCRIEAARAIHPSTKAFLLELAEHFETVAGETVTLNPDDPELQKAVAERLIEIAARKREWLG
Ga0247822_114687821	3300028592	Soil	MIDAAAWARRCHIEAARAIHPFTKAFLLELAAEFEAICGVAVNLDPDDTELQSAVADRLAEVAAKKREWLR
Ga0310887_108392602	3300031547	Soil	TCTCPDCGCDWRDLSRVTMKIPAGNPLTHPAEWARRCRIEAARAIHPLTKAFLVELAAQFESIAGQEVEVDPDDSDLQNAVADRLTELAARKRDWTR
Ga0307405_106726602	3300031731	Rhizosphere	MAKNPNGSPLEDAAEWARKCRVEAVRAIHPTTKEFLLGLAAHYDAISGETGNLDPDDIELQNAVADRLAALAAQRREWMK
Ga0307413_106859612	3300031824	Rhizosphere	MAANPFFHPIEWARRCRIEAARAIHPSTKEFLLELANHFETVGGETVELSPDDPELQNAVAERLIEIAAKKREWLR
Ga0307410_106167401	3300031852	Rhizosphere	FFHPIEWARRCRIEAARAIHPSTKEFLLELANHFETVGGETVELSPDDPELQNAVAERLIEIAAKKREWLR
Ga0310904_114211922	3300031854	Soil	MVKAPAGNPLTHPVEWARRCRIEAARAIHPTTKAFLLDLATRFEDLAGETVTLDPDDAELQNAVGERLAELAERK
Ga0307406_107620382	3300031901	Rhizosphere	YRWARPARSLYHASLMAKNPNGSPLEDAAEWARKCRVEAVRAIHPTTKEFLLGLAAHYDAISGETGNLDPDDIELQNAVADRLAALAAQRREWMK
Ga0310900_101213882	3300031908	Soil	MAKIPAGSPLTHPVEWARRCRIEATRAIHPSTKAFILELAAQFEAMAGETVNLHPDDPELQDAVAERLSEIAAKTREWRR
Ga0308174_118774872	3300031939	Soil	MTKVLAGNPVTHPVEWARRCRIEAARAIHPSTKAFLLELATQFEAIAKEAVSLDPDDPDLQQAVADRLAELASRKRDWTR
Ga0307409_1001940262	3300031995	Rhizosphere	MANLPLGNPVTNPLGWARRTRIEAARAIHPSTKAFLLGLAEQFEAIAGQTVRLDPDDPELQHAVAERLAEIAAQKREWLR
Ga0308173_119827602	3300032074	Soil	MPNRRVQPLENPADWARRCRIEAVRAIHPSIKEFLLELAAEFEDLAGEAVDLDPDDADVQNAVGDRLSQLAAHKNAWTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079792

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences