Metagenome Family F079782

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079782
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	65 residues
Representative Sequence	AVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Number of Associated Samples	76
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	0.86 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	89.57 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Duplodnaviria (75.652 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (32.174 % of family members)
Environment Ontology (ENVO)	Unclassified (73.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (76.522 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1TB03JUN2009E_0304761 2JGI24028J26656_10086414 3JGI24028J26656_10152792 4JGI24028J26656_10189811 5JGI24218J26658_10052511 6JGI24218J26658_10098984 7JGI24218J26658_10186803 8JGI24218J26658_10216881 9JGI24219J26650_10123943 10JGI24890J29729_10257213 11B570J29032_1087808501 12JGI25907J50239_10286653 13JGI25914J50564_101350091 14Ga0049082_100550411 15Ga0007871_11091472 16Ga0075464_108717711 17Ga0070748_12776042 18Ga0105735_11279322 19Ga0114962_107163262 20Ga0114980_107841002 21Ga0114963_103527393 22Ga0114968_101539473 23Ga0114966_105941611 24Ga0114979_107985651 25Ga0114969_100185521 26Ga0114969_106930982 27Ga0114959_100807122 28Ga0114974_100479431 29Ga0114974_106373121 30Ga0114967_101528222 31Ga0114967_101669803 32Ga0114967_106462882 33Ga0133913_103910185 34Ga0133913_108602564 35Ga0133913_113122731 36Ga0153799_10157812 37Ga0177922_102886532 38Ga0177922_104901971 39Ga0177922_108001592 40Ga0163144_116982331 41Ga0181350_10514321 42Ga0181350_11143531 43Ga0181362_10718772 44Ga0181365_10093744 45Ga0181365_11163452 46Ga0181365_11309792 47Ga0181356_10946782 48Ga0181358_10209767 49Ga0181358_10979171 50Ga0181358_12679681 51Ga0181357_12626811 52Ga0181357_13005452 53Ga0181349_10144651 54Ga0181349_10876201 55Ga0181349_11337671 56Ga0181346_10428181 57Ga0181346_10885572 58Ga0181355_11247253 59Ga0181359_10387613 60Ga0181359_10493054 61Ga0181359_10701853 62Ga0194049_11846732 63Ga0211731_103205321 64Ga0194061_11424181 65Ga0181354_10618621 66Ga0181354_10656903 67Ga0181354_10785611 68Ga0181354_11001401 69Ga0181354_11074431 70Ga0181354_11412361 71Ga0181354_11439021 72Ga0244775_106876821 73Ga0208643_11743442 74Ga0208916_100445811 75Ga0208916_101974321 76Ga0209552_11404112 77Ga0209651_11997721 78Ga0208942_11493081 79Ga0209553_12144881 80Ga0209443_11652741 81Ga0209188_10570292 82Ga0209188_13005372 83Ga0209087_12078951 84Ga0209087_13077721 85Ga0209085_10299615 86Ga0209084_12173891 87Ga0209596_102053811 88Ga0209596_10681891 89Ga0209444_103066931 90Ga0209296_11713591 91Ga0209086_101982171 92Ga0209829_101210281 93Ga0209107_102248891 94Ga0209353_103455201 95Ga0209354_103455712 96Ga0304730_100037463 97Ga0315293_111065432 98Ga0315288_102545153 99Ga0315288_112745191 100Ga0315288_115157071 101Ga0315288_115746451 102Ga0315290_111020932 103Ga0315901_107517442 104Ga0315274_109324311 105Ga0315289_111097961 106Ga0315277_112312382 107Ga0315268_116944212 108Ga0316229_12378722 109Ga0334722_104294501 110Ga0335019_0830335_345_518 111Ga0335010_0181812_1106_1300 112Ga0335060_0079069_1_219 113Ga0335060_0517071_1_222 114Ga0335060_0570531_2_208 115Ga0335052_0359676_575_784
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1TB03JUN2009E_0304761 2JGI24028J26656_10086414 3JGI24028J26656_10189811 4Ga0114959_100807122 5Ga0163144_116982331 6Ga0181365_11163452 7Ga0181356_10946782 8Ga0181346_10885572 9Ga0209444_103066931 10Ga0316229_12378722
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90 1TB03JUN2009E_0304761 2JGI24028J26656_10086414 3JGI24028J26656_10189811 4Ga0114959_100807122 5Ga0163144_116982331 6Ga0181365_11163452 7Ga0181356_10946782 8Ga0181346_10885572 9Ga0209444_103066931 10Ga0316229_12378722
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 49.23% Coil/Unstructured: 50.77%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13539	Peptidase_M15_4	3.48
PF13692	Glyco_trans_1_4	2.61
PF05257	CHAP	1.74
PF13392	HNH_3	0.87
PF00534	Glycos_transf_1	0.87
PF01344	Kelch_1	0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.70 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.22 %
Unclassified	root	N/A	11.30 %
Viruses	superkingdom	All Organisms → Viruses	83.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.22 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	75.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	75.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Unclassified	root	N/A	11.30 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	75.65 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	75.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %
Unclassified	root	N/A	11.30 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	73.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Unclassified	root	N/A	11.30 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.87 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.83 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.87 %
Unclassified	root	N/A	11.30 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	73.91 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c030476	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	749	Open in IMG/M
3300002091\|JGI24028J26656_1008641	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1324	Open in IMG/M
3300002091\|JGI24028J26656_1015279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	834	Open in IMG/M
3300002091\|JGI24028J26656_1018981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	700	Open in IMG/M
3300002092\|JGI24218J26658_1005251	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300002092\|JGI24218J26658_1009898	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1611	Open in IMG/M
3300002092\|JGI24218J26658_1018680	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	970	Open in IMG/M
3300002092\|JGI24218J26658_1021688	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	862	Open in IMG/M
3300002098\|JGI24219J26650_1012394	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1348	Open in IMG/M
3300002307\|JGI24890J29729_1025721	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	93.91%
Marine	Environmental → Aquatic → Marine	6.09%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	5.22%
Lake	Environmental → Aquatic → Freshwater → Lake	46.96%
Lentic	Environmental → Aquatic → Freshwater → Lentic	46.09%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.87%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	9.57%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	43.48%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	37.39%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.74%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.35%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.87%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.22%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.35%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.87%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	32.17%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	25.22%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.74%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.87%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	7.83%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	9.57%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300006110	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0304761	3300000176	Freshwater	EGNIFSMNNAATQAFTVPVDATFNFGIGTEFNLFWITGAGHPTISAVTPGTTTVISTGATSATPKLRAANSMASILKIAANSWVVTGDIV*
JGI24028J26656_10086414	3300002091	Lentic	ITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA*
JGI24028J26656_10152792	3300002091	Lentic	EINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA*
JGI24028J26656_10189811	3300002091	Lentic	TDATYAFAVGTEFNVFWITGAGQPTIGAVTTGTTAVISTGATSATPKLRVANSGATIKKLATDSWIVFGDIA*
JGI24218J26658_10052511	3300002092	Lentic	FAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNSGATCKKLAANSWIIFGDLA*
JGI24218J26658_10098984	3300002092	Lentic	AVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA*
JGI24218J26658_10186803	3300002092	Lentic	FAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATAIKLAANSWIIFGDLA*
JGI24218J26658_10216881	3300002092	Lentic	FAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA*
JGI24219J26650_10123943	3300002098	Lentic	VGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATAIKLAANSWIIFGDLA*
JGI24890J29729_10257213	3300002307	Lentic	TEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA*
B570J29032_1087808501	3300002408	Freshwater	AVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS*
JGI25907J50239_10286653	3300003394	Freshwater Lake	NFAIGTQFNVFWLTGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSMATCLKIAANSWIVIGDIA*
JGI25914J50564_101350091	3300003429	Freshwater Lake	NFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA*
Ga0049082_100550411	3300005584	Freshwater Lentic	FAVGTEINVFWITGVGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKIAANSWIIFGDLA*
Ga0007871_11091472	3300006110	Freshwater	SVFWIGGAGQPTIGAVTPGTTTVISTGATSNTPKLRAVNSGATCIKLSANNWIVFGDIS*
Ga0075464_108717711	3300006805	Aqueous	FNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS*
Ga0070748_12776042	3300006920	Aqueous	FNVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATIKKLAANSWIVFGDLA
Ga0105735_11279322	3300007860	Estuary Water	TDATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVSNSGATCKKLAANSWIVFGDLA*
Ga0114962_107163262	3300009151	Freshwater Lake	GTEFTVFWVTGAGQPTIGAVTPGTTAVISTGGTSATPKLRVANSGATIKKLAANSWIVFGDLT*
Ga0114980_107841002	3300009152	Freshwater Lake	EINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNSGATCKKLAANSWIVFGDIS*
Ga0114963_103527393	3300009154	Freshwater Lake	WLTGAGQPTIGAVTPATTTVISTGATSATPKLRVANSMATCLKIAANSWIVIGDIS*
Ga0114968_101539473	3300009155	Freshwater Lake	FNFAVGTEFNVFWITGAGQPTIGATTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA*
Ga0114966_105941611	3300009161	Freshwater Lake	FWITGAGQPTIGAVTPATTTVISTGATSATPKLRVVNSGATCKKIAANSWIVFGDLA*
Ga0114979_107985651	3300009180	Freshwater Lake	GTEINVFWITGAGQPTIGAVTPGTTTVISTGGTSATPKLRVVNSAATCKKLAANSWLVIGDIS*
Ga0114969_100185521	3300009181	Freshwater Lake	PTDATFNFAIGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA*
Ga0114969_106930982	3300009181	Freshwater Lake	DATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANAGATCKKLAANSWIVFGDIS*
Ga0114959_100807122	3300009182	Freshwater Lake	GTEIHFVWITGAGQPTIGATTPGTTTILSTGATAVTPKLRVVNSAATAIKLAANSWLVVGDLA*
Ga0114974_100479431	3300009183	Freshwater Lake	INVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKIAANSWIVFGDIA
Ga0114974_106373121	3300009183	Freshwater Lake	PTDATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNSGATCKKIAANSWIVFGDLF*
Ga0114967_101528222	3300010160	Freshwater Lake	WITGAGQPTIGAVTPATTTVISTGATSATPKLRVVNSGATCKKIAANSWIVFGDLA*
Ga0114967_101669803	3300010160	Freshwater Lake	GTEINVFWITGAGQPTIGAVTPGTTTVISTGGTSATPKLRVANSGATCKKLAANSWIVFGDIS*
Ga0114967_106462882	3300010160	Freshwater Lake	YNFTIGTEFNVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA*
Ga0133913_103910185	3300010885	Freshwater Lake	GTEFTVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKIAANSWIIFGDLA*
Ga0133913_108602564	3300010885	Freshwater Lake	FNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGGTSATPKLRVANSGATCKKLAANSWIVFGDIS*
Ga0133913_113122731	3300010885	Freshwater Lake	VINFVWITGAGQPTIGATTPGTTTISSTAGVTPKLRVANSVASAIKLAANSWLVVGDIA*
Ga0153799_10157812	3300012012	Freshwater	QFNVFWITGAGQPTIGAVTPGTTTVISTGATSASPNLRVANSMATCLKISANNWIVIGDIA*
Ga0177922_102886532	3300013372	Freshwater	ITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKIAANSWIIFGDLA*
Ga0177922_104901971	3300013372	Freshwater	NVFWITGAGQPTVGAVTPGTTTVISTAAVSATPKLRVVNSGATCKKLAANSWIVFGDIA*
Ga0177922_108001592	3300013372	Freshwater	TEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRAANSGATCKKLAANSWIVFGDLA*
Ga0163144_116982331	3300015360	Freshwater Microbial Mat	AREFRIPTDATFNFAIGTQFNGFWITGAGIPAIVAVTPGTTTVISTGAISASPKLRVANSMATAIKIAANSWIVIGDIS*
Ga0181350_10514321	3300017716	Freshwater Lake	GTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0181350_11143531	3300017716	Freshwater Lake	NVFWITGVGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0181362_10718772	3300017723	Freshwater Lake	ATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNSGATCKKLAANSWIVFGDLS
Ga0181365_10093744	3300017736	Freshwater Lake	AVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNSGATCKKLAADSWIVFGDIS
Ga0181365_11163452	3300017736	Freshwater Lake	SRNNAATQQFNTPTDATFNLAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRAANSGATCVKLAANSWIVFGDIA
Ga0181365_11309792	3300017736	Freshwater Lake	PTDATFNFAVGTQFNVFWLTGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSMATCLKLAANSWIVIGDIS
Ga0181356_10946782	3300017761	Freshwater Lake	ATFDFAIGTTINFVWITGAGQPGIAAVTPGTTTIISTGASAVAPKLRVANSAATCLKLSANNWLVTGDIA
Ga0181358_10209767	3300017774	Freshwater Lake	ATFDFTIGTTINFVWITGVGQPSIAAVTPGTTTIISTGASSVAPKLRVANSAATCLKLAANSWLVTGDIA
Ga0181358_10979171	3300017774	Freshwater Lake	TGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSMATCLKISANNWIVIGDIA
Ga0181358_12679681	3300017774	Freshwater Lake	WITGVGQPSIAAVTPGTTTIISTGASSVAPLLRVANSAATCLKLAANSWLVVGDIA
Ga0181357_12626811	3300017777	Freshwater Lake	GTEINVFWLTGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCVKLAANSWIVFGDIA
Ga0181357_13005452	3300017777	Freshwater Lake	YNFTIGTEFNVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0181349_10144651	3300017778	Freshwater Lake	FNFAVGTEINVFWITGAGQPTIGAVTPATTTVISTGATSATPKLRVANSGATCKKIAANSWIVFGDLA
Ga0181349_10876201	3300017778	Freshwater Lake	VGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNSGATCKKLAANSWIIFGDLA
Ga0181349_11337671	3300017778	Freshwater Lake	FNFAVGTEINVFWITGAGQPTIGAVTPATTTVISTGATSAKPKLRVANSGATCKKIAANSWIVFGDLA
Ga0181346_10428181	3300017780	Freshwater Lake	TDATYNFTIGTEFNVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0181346_10885572	3300017780	Freshwater Lake	AVGTQFNVFWLTGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSMATCLKISANNWIVIGDIA
Ga0181355_11247253	3300017785	Freshwater Lake	ATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKIAANSWIIFGDLA
Ga0181359_10387613	3300019784	Freshwater Lake	TDATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0181359_10493054	3300019784	Freshwater Lake	TGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNAGATCKKIAANSWIIFGDLA
Ga0181359_10701853	3300019784	Freshwater Lake	SGTQFNVFWLTGAGQPTIGAVTPATTTVISTGAVSATPKLRVANSMATCLKIAANSWIVIGDIS
Ga0194049_11846732	3300020157	Anoxic Zone Freshwater	NFAIGTQFNVFWLTGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSMATCLKIAANSWIVIGDIS
Ga0211731_103205321	3300020205	Freshwater	VGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0194061_11424181	3300021601	Anoxic Zone Freshwater	FNFAVGTEINVFWITGAGQPTIGAVTSGTTTVISTGATSATPKLRVANSGATCKKLAANSWIIFGDLA
Ga0181354_10618621	3300022190	Freshwater Lake	ITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIIFGDIA
Ga0181354_10656903	3300022190	Freshwater Lake	DATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVVNSGATCKKLAANSWIVFGDIS
Ga0181354_10785611	3300022190	Freshwater Lake	TDATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0181354_11001401	3300022190	Freshwater Lake	NFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0181354_11074431	3300022190	Freshwater Lake	ITGVGQPSIAAVTPGTTTIISTGASSVAPKLRVANSAATCLKLAANNWLVTGDIA
Ga0181354_11412361	3300022190	Freshwater Lake	PTDATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0181354_11439021	3300022190	Freshwater Lake	AVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0244775_106876821	3300024346	Estuarine	TFNFAIGTEIHFVWITGAGQPTIGATTPGTTTILSTGATSVTPKLRVANSAATAIKLAANNWLVIGDIS
Ga0208643_11743442	3300025645	Aqueous	FNFAVGTELNVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0208916_100445811	3300025896	Aqueous	WITGAGQPTIGAVNTGTTTVISTGATSATPKLSVANSGATCKKLAANSWIVFGDIV
Ga0208916_101974321	3300025896	Aqueous	NVTIGTEFNVFWITGVGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATIKKLAANSWIVFGDLA
Ga0209552_11404112	3300027563	Freshwater Lake	TGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDVA
Ga0209651_11997721	3300027581	Freshwater Lake	VFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0208942_11493081	3300027627	Freshwater Lentic	DATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0209553_12144881	3300027688	Freshwater Lake	TFNFAVGTEINVFWITGAGQPTIGATTPATTTVISTGAVSATPKLRVANSGATCKKIAANSWIIFGDIS
Ga0209443_11652741	3300027707	Freshwater Lake	TFNFAVGTTINFVWITGVGQPSIAAVTPGTTTIISTGASSVAPLLRVANSAATCLKLAANSWLVVGDIA
Ga0209188_10570292	3300027708	Freshwater Lake	GTEIHFVWITGAGQPTIGATTPGTTTILSTGATAVTPKLRVVNSAATAIKLAANSWLVVGDLA
Ga0209188_13005372	3300027708	Freshwater Lake	TDATFNFAVGTEINVFWITGAGQPTIGAVTTGTTTVISIGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0209087_12078951	3300027734	Freshwater Lake	TDATFNFAIGTQFNVFWLTGAGQPTIGAVTPATTTVISTGATSATPKLRVANSMATCLKIAANSWIVIGDIA
Ga0209087_13077721	3300027734	Freshwater Lake	FNFAIGTEFTVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKIAANSWIIFGDLA
Ga0209085_10299615	3300027741	Freshwater Lake	ITGAGQPTIGATTPGTTTILSTGATAVTPKLRVVNSAATAIKLAANSWLVVGDLA
Ga0209084_12173891	3300027749	Freshwater Lake	NVFWITGAGQPTIGAVTSGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLS
Ga0209596_102053811	3300027754	Freshwater Lake	TDATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0209596_10681891	3300027754	Freshwater Lake	TDATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANAGATCKKLAANSWIVFGDIS
Ga0209444_103066931	3300027756	Freshwater Lake	NVFWITDAGQPKVVAATPGTTTVISVGATSASPNLRVANSMATCLKIAANSWIVIGDIS
Ga0209296_11713591	3300027759	Freshwater Lake	NAATQQFNIPTDASVAFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0209086_101982171	3300027770	Freshwater Lake	TFNFAIGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0209829_101210281	3300027777	Freshwater Lake	DATFAFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLATDSWIVFGDLS
Ga0209107_102248891	3300027797	Freshwater And Sediment	WITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0209353_103455201	3300027798	Freshwater Lake	INVFWITGAGQPTIGAVTPGTTTVISTGAVSATPKLRVANSGATCKKIAANSWIIFGDIS
Ga0209354_103455712	3300027808	Freshwater Lake	VFWITGAGQPKVVAATPGTTTVISVGATSASPNLRVANSMATCLKIAANSWIVIGDIS
Ga0304730_100037463	3300028394	Freshwater Lake	FAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIIFGDLS
Ga0315293_111065432	3300031746	Sediment	ITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKIAANSWIIFGDLA
Ga0315288_102545153	3300031772	Sediment	TEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0315288_112745191	3300031772	Sediment	NFAVGTEFSVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIS
Ga0315288_115157071	3300031772	Sediment	AVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIIFGDIS
Ga0315288_115746451	3300031772	Sediment	VFWLTGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSMATCLKIAANSWIVIGDIA
Ga0315290_111020932	3300031834	Sediment	FNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGGTSATPKLRVANSGATCKKLAANSWIVFGDIA
Ga0315901_107517442	3300031963	Freshwater	FVWITGAGQPSIAAVTPGTTTIISTGASSVAPKLRVANSAATCLKLAANSWLVVGDIA
Ga0315274_109324311	3300031999	Sediment	EINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDL
Ga0315289_111097961	3300032046	Sediment	INVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDVS
Ga0315277_112312382	3300032118	Sediment	ATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIIFGDIA
Ga0315268_116944212	3300032173	Sediment	TFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0316229_12378722	3300032676	Freshwater	YPVGTQISFAWITGAGQPTISAVTPGTTTIASVGAVAASPKLRVANSVATAIKIATDSWLVTGDVA
Ga0334722_104294501	3300033233	Sediment	DATFNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDIT
Ga0335019_0830335_345_518	3300034066	Freshwater	FWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATIKKLAANSWIVFGDIA
Ga0335010_0181812_1106_1300	3300034092	Freshwater	VGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0335060_0079069_1_219	3300034122	Freshwater	TDATFNFAIGTEINVFWITGVGQPTIGAVTSGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0335060_0517071_1_222	3300034122	Freshwater	PTDATFNFAVGTEINVFWITGVGQPTIGAVTPGTTTVISTAATSATPKLRVANSGATCKKLAANLWIIFGDVV
Ga0335060_0570531_2_208	3300034122	Freshwater	FNFAVGTEINVFWITGAGQPTIGAVTPGTTTVISTGATSATPKLRVANSGATCKKLAANSWIVFGDLA
Ga0335052_0359676_575_784	3300034279	Freshwater	TFNFAVGTEINVFWIAGAGQPTIGAVTPGTTTVISTGATSATPKLRLVNSGATCKKLSANSWIVFGDIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079782

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences