Metagenome / Metatranscriptome Family F079776

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079776
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	63 residues
Representative Sequence	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIE
Number of Associated Samples	104
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.38 %
% of genes near scaffold ends (potentially truncated)	63.48 %
% of genes from short scaffolds (< 2000 bps)	88.70 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.217 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.783 % of family members)
Environment Ontology (ENVO)	Unclassified (24.348 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 12.07% Coil/Unstructured: 87.93%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13546	DDE_5	38.26
PF10412	TrwB_AAD_bind	0.87
PF03400	DDE_Tnp_IS1	0.87
PF04851	ResIII	0.87
PF01264	Chorismate_synt	0.87
PF13673	Acetyltransf_10	0.87
PF00078	RVT_1	0.87
PF02775	TPP_enzyme_C	0.87
PF05494	MlaC	0.87
PF00005	ABC_tran	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0082	Chorismate synthase	Amino acid transport and metabolism [E]	0.87
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.87
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.30 %
Unclassified	root	N/A	14.78 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.87 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	70.43 %
Unclassified	root	N/A	14.78 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.87 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	70.43 %
Unclassified	root	N/A	14.78 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	69.57 %
Unclassified	root	N/A	14.78 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	69.57 %
Unclassified	root	N/A	14.78 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8894344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1367	Open in IMG/M
3300000858\|JGI10213J12805_11738518	Not Available	504	Open in IMG/M
3300002908\|JGI25382J43887_10274993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	758	Open in IMG/M
3300002908\|JGI25382J43887_10426237	Not Available	561	Open in IMG/M
3300004156\|Ga0062589_100332468	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300004157\|Ga0062590_100216910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1402	Open in IMG/M
3300004268\|Ga0066398_10149607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	585	Open in IMG/M
3300004463\|Ga0063356_101780400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	924	Open in IMG/M
3300004633\|Ga0066395_10782571	Not Available	571	Open in IMG/M
3300004798\|Ga0058859_10059632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1418	Open in IMG/M
3300005172\|Ga0066683_10800925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	548	Open in IMG/M
3300005178\|Ga0066688_10531582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	756	Open in IMG/M
3300005295\|Ga0065707_10987386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	542	Open in IMG/M
3300005330\|Ga0070690_100467154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	938	Open in IMG/M
3300005332\|Ga0066388_100361494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2098	Open in IMG/M
3300005332\|Ga0066388_101177575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1307	Open in IMG/M
3300005332\|Ga0066388_107343938	Not Available	553	Open in IMG/M
3300005332\|Ga0066388_108430767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	513	Open in IMG/M
3300005332\|Ga0066388_108700400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	504	Open in IMG/M
3300005338\|Ga0068868_100109289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2245	Open in IMG/M
3300005450\|Ga0066682_10692040	Not Available	628	Open in IMG/M
3300005544\|Ga0070686_100097708	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300005552\|Ga0066701_10358543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	903	Open in IMG/M
3300005553\|Ga0066695_10786605	Not Available	550	Open in IMG/M
3300005558\|Ga0066698_10190722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1399	Open in IMG/M
3300005558\|Ga0066698_10656225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	699	Open in IMG/M
3300005575\|Ga0066702_10715515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	596	Open in IMG/M
3300005587\|Ga0066654_10580665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	619	Open in IMG/M
3300005615\|Ga0070702_100499216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	893	Open in IMG/M
3300005616\|Ga0068852_100714291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1013	Open in IMG/M
3300005617\|Ga0068859_101472334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	751	Open in IMG/M
3300005719\|Ga0068861_100164647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1832	Open in IMG/M
3300005842\|Ga0068858_100236219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1733	Open in IMG/M
3300005884\|Ga0075291_1050912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	557	Open in IMG/M
3300005937\|Ga0081455_10125258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2018	Open in IMG/M
3300005937\|Ga0081455_10241900	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300005983\|Ga0081540_1147675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	933	Open in IMG/M
3300006034\|Ga0066656_10589441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	720	Open in IMG/M
3300006046\|Ga0066652_100511041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1118	Open in IMG/M
3300006806\|Ga0079220_11975466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	519	Open in IMG/M
3300006844\|Ga0075428_100747313	Not Available	1041	Open in IMG/M
3300006845\|Ga0075421_101865723	Not Available	644	Open in IMG/M
3300006846\|Ga0075430_100182870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1743	Open in IMG/M
3300006852\|Ga0075433_10119286	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2341	Open in IMG/M
3300006854\|Ga0075425_100315515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1799	Open in IMG/M
3300006871\|Ga0075434_100168574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2210	Open in IMG/M
3300006871\|Ga0075434_101661904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	647	Open in IMG/M
3300006880\|Ga0075429_100403357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1197	Open in IMG/M
3300006904\|Ga0075424_100592815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1183	Open in IMG/M
3300006904\|Ga0075424_102625168	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300006969\|Ga0075419_10254457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1174	Open in IMG/M
3300007076\|Ga0075435_100281613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1419	Open in IMG/M
3300007258\|Ga0099793_10355505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	716	Open in IMG/M
3300009100\|Ga0075418_10022518	All Organisms → cellular organisms → Bacteria	6925	Open in IMG/M
3300009137\|Ga0066709_101342933	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300009147\|Ga0114129_13425958	Not Available	509	Open in IMG/M
3300009792\|Ga0126374_10731089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	748	Open in IMG/M
3300010046\|Ga0126384_10222183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1509	Open in IMG/M
3300010359\|Ga0126376_13114381	Not Available	513	Open in IMG/M
3300010360\|Ga0126372_10033362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3270	Open in IMG/M
3300010366\|Ga0126379_12660433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	597	Open in IMG/M
3300010397\|Ga0134124_11055506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	827	Open in IMG/M
3300010398\|Ga0126383_11591099	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012096\|Ga0137389_11222100	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300012199\|Ga0137383_11040902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	595	Open in IMG/M
3300012207\|Ga0137381_10747915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	849	Open in IMG/M
3300012349\|Ga0137387_10264551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1241	Open in IMG/M
3300012350\|Ga0137372_10145518	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300012351\|Ga0137386_11229533	Not Available	523	Open in IMG/M
3300012506\|Ga0157324_1009583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	803	Open in IMG/M
3300012513\|Ga0157326_1075160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	543	Open in IMG/M
3300012918\|Ga0137396_10308645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1170	Open in IMG/M
3300012948\|Ga0126375_10483719	Not Available	918	Open in IMG/M
3300012971\|Ga0126369_12822842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	569	Open in IMG/M
3300013297\|Ga0157378_10829474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	952	Open in IMG/M
3300013306\|Ga0163162_10941231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	975	Open in IMG/M
3300014487\|Ga0182000_10188995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	779	Open in IMG/M
3300015371\|Ga0132258_10782297	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300015372\|Ga0132256_100842287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1033	Open in IMG/M
3300016357\|Ga0182032_10988471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	718	Open in IMG/M
3300018056\|Ga0184623_10290230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	741	Open in IMG/M
3300019883\|Ga0193725_1093485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	719	Open in IMG/M
3300020004\|Ga0193755_1031199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1763	Open in IMG/M
3300025923\|Ga0207681_11174896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	645	Open in IMG/M
3300025927\|Ga0207687_10163688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1710	Open in IMG/M
3300025936\|Ga0207670_10156212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1698	Open in IMG/M
3300025938\|Ga0207704_10154072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1626	Open in IMG/M
3300025942\|Ga0207689_10231303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1528	Open in IMG/M
3300025986\|Ga0207658_10587119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1000	Open in IMG/M
3300026023\|Ga0207677_10556870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1000	Open in IMG/M
3300026035\|Ga0207703_10219471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1699	Open in IMG/M
3300026075\|Ga0207708_10085166	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300026536\|Ga0209058_1076467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1774	Open in IMG/M
3300027873\|Ga0209814_10069380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1480	Open in IMG/M
3300027880\|Ga0209481_10067499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1685	Open in IMG/M
3300027909\|Ga0209382_10197379	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300027915\|Ga0209069_10924222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	530	Open in IMG/M
3300028380\|Ga0268265_10842632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	896	Open in IMG/M
3300028381\|Ga0268264_10231379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1707	Open in IMG/M
3300028592\|Ga0247822_10861611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	742	Open in IMG/M
3300028809\|Ga0247824_10629289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	647	Open in IMG/M
3300030546\|Ga0247646_1148466	Not Available	632	Open in IMG/M
3300030551\|Ga0247638_1115967	Not Available	618	Open in IMG/M
3300030585\|Ga0247639_1214847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	580	Open in IMG/M
3300030608\|Ga0247651_10000564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2083	Open in IMG/M
3300030610\|Ga0247613_10285177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	618	Open in IMG/M
3300030829\|Ga0308203_1047890	Not Available	641	Open in IMG/M
3300031719\|Ga0306917_10300021	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300031820\|Ga0307473_11470558	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031908\|Ga0310900_10443222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	997	Open in IMG/M
3300032174\|Ga0307470_10930399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	685	Open in IMG/M
3300032205\|Ga0307472_100216905	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300032205\|Ga0307472_101676442	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	627	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.48%
Host-Associated	Host-Associated	36.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.74%
Plants	Host-Associated → Plants	35.65%
Aquatic	Environmental → Aquatic	1.74%
Human	Host-Associated → Human	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.52%
Sediment	Environmental → Aquatic → Sediment	1.74%
Digestive System	Host-Associated → Human → Digestive System	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.65%
Loam	Environmental → Terrestrial → Soil → Loam	11.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.87%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.87%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.87%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030546	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030551	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030585	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030608	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030610	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03373680	2088090015	Soil	MDDFSLASPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKASRTKNLITEGLGSCS
JGI10213J12805_117385181	3300000858	Soil	TRPEGKRDDFSLARPAGHLIMEDGSGPDGLAKRDGAKALFGAESGDTATTPLNKPPRTKNLITESYE
JGI25382J43887_102749931	3300002908	Grasslands Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITEY
JGI25382J43887_104262371	3300002908	Grasslands Soil	MRDDFSLARPAGHLIMEDGSGPDGLAKRDGAKALFGAESGDTATTPLNKPPRTKNLITE
Ga0062589_1003324682	3300004156	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIE*
Ga0062590_1002169101	3300004157	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYTGI*
Ga0066398_101496071	3300004268	Tropical Forest Soil	MDNFSLARPAGQLIMGDGSGPDGLAKKDGAKALSGAESVDTATTQVGKPSRTKNLI
Ga0063356_1017804001	3300004463	Arabidopsis Thaliana Rhizosphere	MRADFSLARPVGHLIMGDGSGPDGLAEKDGAKALSGAESGDTATTQLNKPSRTKNLIIEYEDVKVELIKG
Ga0066395_107825711	3300004633	Tropical Forest Soil	MTDDFSLASPAGHFIMGDGSGPDGLATKGGAKALSRAASVDTATTQLDTPSRTINLIIESICRCHDLQST*
Ga0058859_100596322	3300004798	Host-Associated	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYKGSPHVQR*
Ga0066683_108009252	3300005172	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITEYHALVRLRICR
Ga0066688_105315821	3300005178	Soil	MDDFSLARPAEHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTPLDKPSRTKNLIIE
Ga0065707_109873862	3300005295	Switchgrass Rhizosphere	MTDDFSLASPAEHLIMGDGSGPDGLATKDGAKALSRAVSVDTATTQLNTPSRTKNLIIECITLPKVELLVDQSEAVEHHGF
Ga0070690_1004671541	3300005330	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEL
Ga0066388_1003614942	3300005332	Tropical Forest Soil	MTDDFSLARPVGQLIMGDGSGPDGLAEKDGAKALSGAESGDTATTQLDKPSRTKNLIIE
Ga0066388_1011775752	3300005332	Tropical Forest Soil	MRADFSLARPVGHLIMGDGSGPDGLAEKDGAKALSGAESGDTATTQLDKPSRTKNLIIEY
Ga0066388_1026260562	3300005332	Tropical Forest Soil	MRVDFSLARPVGHLIMGDGSGPAGLVEKDGAKALSGAESGDTATTQLNKPSRTKNLIIESINSAMSRERYLLA*
Ga0066388_1073439381	3300005332	Tropical Forest Soil	GHEGCARPEGMRDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAESGDTPTTQVGKPSRTKT*
Ga0066388_1084307672	3300005332	Tropical Forest Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITE
Ga0066388_1087004001	3300005332	Tropical Forest Soil	MDDFSLARPAGHLIMGDGSGPDGLAKRDGAKALSGAESGDTATTPLDKPSRTKNLI
Ga0068868_1001092892	3300005338	Miscanthus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYHHSCSF*
Ga0066682_106920403	3300005450	Soil	MIDDFSLARPVGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTQLGKPSRTKNLVIE*
Ga0070686_1000977083	3300005544	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIE
Ga0066701_103585432	3300005552	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTPLDKPSRTKNLIIE*
Ga0066695_107866051	3300005553	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITELKYRAHEVMRTTPVMST*
Ga0066698_101907221	3300005558	Soil	MDDFSLARPTGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTQLDKPSRTKNLI
Ga0066698_106562252	3300005558	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITEWESKS*
Ga0066702_107155152	3300005575	Soil	MDDLSLARLAGHLIMGDGSGPDGLATKDGAKALSGAASVDTATTQVDKPSRTKN
Ga0066654_105806651	3300005587	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITESKA*
Ga0070702_1004992162	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDDFSLARPAGHLIMEDGSGPDGLAKRDGAKALFGAESGDTATTPLNKPPRTKN
Ga0068852_1007142912	3300005616	Corn Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYYSSSPCSH
Ga0068859_1014723341	3300005617	Switchgrass Rhizosphere	MADDFSLARLVGHLIMRDGSGPDGLAEKDRAKALSGAASGDTATTQLDKVKNKKLEN
Ga0068861_1001646471	3300005719	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEC
Ga0068858_1002362191	3300005842	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEFIAFPLTTRRHLGLLAASGP
Ga0075291_10509121	3300005884	Rice Paddy Soil	MDDFSLTRPSEHLKWEDGSWPDGLAKKDGAKALSGAESVDTATTQLGKPSRTKNLIIEFNEINRFWETYDFEQ
Ga0081455_101252581	3300005937	Tabebuia Heterophylla Rhizosphere	MDDFSLTRPTEQLKWEDGSWPDGLAKKDGAKALVGAESVDTATTHLGKPSRTKNLITESADKLLGF
Ga0081455_102419003	3300005937	Tabebuia Heterophylla Rhizosphere	MTDDFSLARPVGHLIMGGGSGPDGLAEKDGAKALSRAESGDTATTQLDKPSRTKNLIIE*
Ga0081540_11476752	3300005983	Tabebuia Heterophylla Rhizosphere	MRADFSLARLVGHLIMGDGSGPDGLAEKDGAKALSGAASGDTATTQLDKPSRTKNLIIEFQKKKI
Ga0066656_105894411	3300006034	Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSR
Ga0066652_1005110412	3300006046	Soil	MDDLSLARPAGHLLMGDGSGPDGLAKKDGAKALSGAESVDTATTPLDKPSRTKNLIIESISQRCKGVSYYVG*
Ga0079220_119754662	3300006806	Agricultural Soil	MRADFSLARLVGHLIMGDGSGPDGLAEKDGAKALSGAESGDTATTHLDKPSRTKNLIIEYYHRFQTASRIDRTL*
Ga0075428_1007473132	3300006844	Populus Rhizosphere	MDDFSLARPVGHLIMGDGSGPDNLAKRDGAKALSGAESGDTATTPLDKPSRTKNLIIE*
Ga0075421_1018657233	3300006845	Populus Rhizosphere	GHEGCARPEGMMDDFSLARPAGHLIMGDGSGPDGLATKDGAKALSGAASVDTATTQVDKPSRTKNLITE*
Ga0075430_1001828701	3300006846	Populus Rhizosphere	MADDFSLARPVGHFIMRDGSGPNGLAEKDGAKALSGAESGDTATTQLDKPSRTKNLRIE
Ga0075433_101192864	3300006852	Populus Rhizosphere	MLDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQLDQPSRTKNFIIE
Ga0075425_1003155152	3300006854	Populus Rhizosphere	MRADFSLARLVGHLIMGDGSGPDGLAEKDGAKALSGAESGDTATTHLDKPSRTKNLIIEY
Ga0075434_1001685742	3300006871	Populus Rhizosphere	MADDFSLARPVGHFIMRDGSGPNGLAEKDGAKALSGAESGDTATTQLDKPSRTKNLRIEFKDTDFSVL*
Ga0075434_1016619041	3300006871	Populus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDELAKKDRAKALSGAASIDTATTQVDKPSRTKNLITELDIHPRFICMNKRTF
Ga0075429_1004033572	3300006880	Populus Rhizosphere	MLDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQLDQPSRTKNFIIEYLVTNGVSMLQTI*
Ga0075424_1005928151	3300006904	Populus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDELAKKDRAKALSGAASIDTATTQVDKPSRTKNLITEY
Ga0075424_1026251682	3300006904	Populus Rhizosphere	RPEGMLDDFSLARPAGHLIMGDGSGPDGLATKDGAKALSGAASVDTATTQVDKPSRTKNLITEYIALI*
Ga0075419_102544571	3300006969	Populus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLATKDGAKALSGAASVDTATTQVDKPSRTKNLITEFQDFLPIVVGMHARK
Ga0075435_1002816131	3300007076	Populus Rhizosphere	MLDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTQLDQPSRTKNFIIE
Ga0099793_103555052	3300007258	Vadose Zone Soil	MDDFSLARPAGHLRMGDGSGPDGLATKDGAKALSRAESVDTATTQVDKQS
Ga0075418_100225181	3300009100	Populus Rhizosphere	MADDFSLARPVGHFIMRDGSGPNGLAEKDGAKALSGAESGDTATTQLDKPSRTKNLRIEY
Ga0066709_1013429333	3300009137	Grasslands Soil	VRPEGMMDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTPLDKPSRTKNLIIEL*
Ga0114129_134259582	3300009147	Populus Rhizosphere	MMDDFSLARPVGHLIMGDGSGPDNLAKRDGAKALSGAESGDTATTPLDKPSRTKNLIIE*
Ga0126374_107310892	3300009792	Tropical Forest Soil	MDDCSLARPAGHLIMGDGSGPDGLAKKDGAKALSGVASVDTAPTQVDKPSRTINVITEFEVL
Ga0126384_102221832	3300010046	Tropical Forest Soil	MDNFSLARPAGQLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDQPSRTKSLITEWEA*
Ga0126370_112368632	3300010358	Tropical Forest Soil	MDDFSLARPVGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTQVDQPSRTKNLIIEFKENYVNFGALLWRKNI*
Ga0126376_131143811	3300010359	Tropical Forest Soil	RPENMKVDFSLARPAGHLIMENGSGPDGLAKKDGAKALSGAESVDTATTHVDQPSRTKNLIIEL*
Ga0126372_100333623	3300010360	Tropical Forest Soil	MDDFSLARPVGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTQVDQPSRTKNLIIEFQDRVYVFGEP*
Ga0126379_126604331	3300010366	Tropical Forest Soil	MRDDFSLARPAGQLIMEDGSGPDGLAKRDGAKALSGAESGDTATTPLDKPSRTKNLITESLGDALECITDL
Ga0134124_110555062	3300010397	Terrestrial Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLITEYREIMG*
Ga0126383_115910992	3300010398	Tropical Forest Soil	RRVGHLIMGDGSGPDGLAEKDEAKALSRAESGDTATTELDKPSRTKNLIIECERR*
Ga0137389_112221003	3300012096	Vadose Zone Soil	MDDCSLTRPAGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTSLDKPSRTKN
Ga0137383_110409022	3300012199	Vadose Zone Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITESYVACRDTLLQG
Ga0137381_107479152	3300012207	Vadose Zone Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITESWDMPPDPV
Ga0137387_102645512	3300012349	Vadose Zone Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITEYQCVTIGSSSTVFTG*
Ga0137372_101455182	3300012350	Vadose Zone Soil	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITESYVACRDTLLQGLPRGNRC*
Ga0137386_112295331	3300012351	Vadose Zone Soil	EGMMDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVDTATTQVDKSSRTKNLITEL*
Ga0157324_10095832	3300012506	Arabidopsis Rhizosphere	MDDFSLARPAGHLIRGDGSGPDGLAKKDRAKALSGAASVDTATTQVDKPSRTKNLITE*
Ga0157326_10751602	3300012513	Arabidopsis Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIECKEIP*
Ga0137396_103086452	3300012918	Vadose Zone Soil	MDDFSLARPAGHLIMGDGSGPDGLAQKDGAKALSGAESVDTATTQLDKPSRTKNFIIEYYLCERCMGPPRSI*
Ga0126375_104837192	3300012948	Tropical Forest Soil	MRDDFSLARPAGHLIMADGSGPDGLAKRDGAKALFGAESGDTATTPLNKPPRTKNLITESYE*
Ga0126369_128228421	3300012971	Tropical Forest Soil	MRDDFSLARPAGHLIMGDGSGPDGLAKRDGAKALSGAASGDTATTPLDKPS
Ga0157378_108294742	3300013297	Miscanthus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEF*
Ga0163162_109412312	3300013306	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLI
Ga0182000_101889951	3300014487	Soil	MDNFSLARPAGQLIMGDGSGPDGLATKDGAKALSRAVSVDTATTQLNTPSRTKNL
Ga0132258_107822972	3300015371	Arabidopsis Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYI
Ga0132256_1008422871	3300015372	Arabidopsis Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLATKDGAKALSGAEPGDTATTSLDKPSRTKNLIIEFQQDHSRHERHRRL
Ga0182032_109884711	3300016357	Soil	MRDDFSLARPAGHLIMEDGSGPDGLAKRDGATALSGAESGDTATTPLDKPSRTKNLITELNVLD
Ga0184623_102902301	3300018056	Groundwater Sediment	MDDFSLVRPVGHLIMGDGSGPDGLAEKDGAKALSGAASVDTATTQLDKPSRTKNLIIEYKCFLGID
Ga0193725_10934851	3300019883	Soil	MDDFSLARPVGHLIMGDGSGPDGLAEKDGAKALSGAASVDTATTQLDKPSRTKNLIIEFSSMPMTGYLENR
Ga0193755_10311993	3300020004	Soil	MDDFSLARPVGHLIMGDGSGPDGLAEKDGAKALSGAASVDTATTQLDKPSRTKNLIIEF
Ga0207681_111748961	3300025923	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIESI
Ga0207687_101636881	3300025927	Miscanthus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIES
Ga0207670_101562121	3300025936	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIECI
Ga0207704_101540721	3300025938	Miscanthus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKN
Ga0207689_102313031	3300025942	Miscanthus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLITEFSGI
Ga0207658_105871192	3300025986	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIAE
Ga0207677_105568702	3300026023	Miscanthus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYHHSCS
Ga0207703_102194712	3300026035	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYYSSSP
Ga0207708_100851661	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEYKLSVIINGSH
Ga0209058_10764671	3300026536	Soil	MDDFSLARPTGHLIMGDGSGPDGLAKKDGAKALSGAESVDTATTQLDKPS
Ga0209814_100693802	3300027873	Populus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDELAKKDRAKALSGAASIDTATTQVDKPSRTKNLITESIAPKGKSLK
Ga0209481_100674992	3300027880	Populus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDELAKKDRAKALSGAASIDTATTQVDKPSRTKNLITEST
Ga0209382_101973791	3300027909	Populus Rhizosphere	MDDFSLARPAGHLIMGDGSGPDELAKKDRAKALSGAASIDTATTQVDKPSRTKNLITEF
Ga0209069_109242222	3300027915	Watersheds	MDDFSLARPVGHLIMGDGSGPDGLAEKDGAKALSGAASVDTATTQLDKPSRTKNLIIE
Ga0268265_108426322	3300028380	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEFE
Ga0268264_102313791	3300028381	Switchgrass Rhizosphere	MDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSGAASVDTATTQVDKPSRTKNLIIEFKAFL
Ga0247822_108616112	3300028592	Soil	MDDFSLARPAGHLIMGDGSGPDDLATKDGAKALSGAASVDTATTQVDKPSRTKNLITECKGKSVR
Ga0247824_106292891	3300028809	Soil	MDDFSLARPAGHLIMGDGSGPDDLATKDGAKALSGAASVDTATTQVDKPSRTKNLITELA
Ga0247646_11484662	3300030546	Soil	GCAQPEDMMDDFSLARPVGHLIMWDGSGPDGLAEKDGAKALSGAESVDTATTQLDKPSRTKNLINEYTA
Ga0247638_11159671	3300030551	Soil	MDDFSLARPVGHLIMWDGSGPDGLAEKDGAKALSGAESVDTATTQLDKPSRTKNLINEYQALLGSALLLTYYLL
Ga0247639_12148472	3300030585	Soil	MDDFSLARPVGHLIMWDGSGPDGLAEKDGAKALSGAESVDTATTQLDKPSRTKNSIIEYYVHACSTGA
Ga0247651_100005642	3300030608	Soil	MDDFSLARPVGHLIMWDGSGPDGLAEKDGAKALSGAESVDTATTQLDKPSRTKNLINE
Ga0247613_102851771	3300030610	Soil	MDDFSLARPVGHLIMWDGSGPDGLAEKDGAKALSGAESVDTATTQLDKPSRTKNLINEY
Ga0308203_10478902	3300030829	Soil	DDFSLARPAGHLIMGDGSGPDGLATKDGAKALSGAASVDTATTQVDKPSRTKNLITEYRSSENELEIQDWLP
Ga0306917_103000212	3300031719	Soil	MRDDFSLARPAGHLIMEDGSGPDGLAKRDGAKALSGAESGDTATTPLDKPSRTKNLITER
Ga0307473_114705582	3300031820	Hardwood Forest Soil	MRDDFSLARPAGHLIMGDGSGPDGLAKKDGAKALSRAASVNTATTQVDKSSRTKNLITEFITLRK
Ga0310900_104432222	3300031908	Soil	MDDFSLARPAGHLIMGDGSGPDDLATKDGAKALSGAASVDTATTQVDKPSRTKNLITEF
Ga0307470_109303991	3300032174	Hardwood Forest Soil	MDDFSLARPAGHLIMGDGSGPDGLATKDGAKALSGAASVDTATTQVDKPSRTKNLIT
Ga0307472_1002169052	3300032205	Hardwood Forest Soil	MDDFSLARPAGHLIMGDGSGPDGLATKDGAKALSGAASVDTATTQVDKPSRTKNLITELK
Ga0307472_1016764422	3300032205	Hardwood Forest Soil	EGMLDDFSLARPAGHLIMGDGSGSDGLAKRDGAKALSGAESGDTATTPLDKPSRTKNLII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences