Metagenome Family F079765

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079765
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	90 residues
Representative Sequence	MSEIILPSTYNEPTVMWRMQRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDEWTGAIQWSDRLRAQYWTVGWRLLSDDPPEGPPARRES
Number of Associated Samples	92
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.52 %
% of genes near scaffold ends (potentially truncated)	43.48 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (80.870 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (9.565 % of family members)
Environment Ontology (ENVO)	Unclassified (39.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.087 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.53% β-sheet: 27.27% Coil/Unstructured: 56.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF07883	Cupin_2	5.22
PF12847	Methyltransf_18	3.48
PF13413	HTH_25	3.48
PF07676	PD40	3.48
PF09994	DUF2235	3.48
PF01546	Peptidase_M20	2.61
PF00296	Bac_luciferase	1.74
PF07366	SnoaL	1.74
PF13649	Methyltransf_25	1.74
PF04909	Amidohydro_2	1.74
PF02954	HTH_8	1.74
PF13620	CarboxypepD_reg	1.74
PF14449	PT-TG	1.74
PF00561	Abhydrolase_1	0.87
PF07732	Cu-oxidase_3	0.87
PF12697	Abhydrolase_6	0.87
PF13676	TIR_2	0.87
PF02868	Peptidase_M4_C	0.87
PF07687	M20_dimer	0.87
PF01066	CDP-OH_P_transf	0.87
PF00158	Sigma54_activat	0.87
PF00076	RRM_1	0.87
PF07731	Cu-oxidase_2	0.87
PF06505	XylR_N	0.87
PF13302	Acetyltransf_3	0.87
PF13354	Beta-lactamase2	0.87
PF12570	DUF3750	0.87
PF13519	VWA_2	0.87
PF00497	SBP_bac_3	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	1.74
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.74
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.87
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.87
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.87 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.87 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.87 %
Unclassified	root	N/A	19.13 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.13 %
Unclassified	root	N/A	19.13 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.70 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	55.65 %
Unclassified	root	N/A	19.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.78 %
Unclassified	root	N/A	19.13 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.78 %
Unclassified	root	N/A	19.13 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3.48 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.78 %
Unclassified	root	N/A	19.13 %
Fluviibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Fluviibacterium	2.61 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.78 %
Unclassified	root	N/A	19.13 %
unclassified Fluviibacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Fluviibacterium → unclassified Fluviibacterium	2.61 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.78 %
Unclassified	root	N/A	19.13 %
Fluviibacterium sp. MJW13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Fluviibacterium → unclassified Fluviibacterium → Fluviibacterium sp. MJW13	2.61 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_101700898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300000559\|F14TC_102693566	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300001990\|JGI24737J22298_10272719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300003267\|soilL1_10048377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7485	Open in IMG/M
3300003319\|soilL2_10008840	All Organisms → cellular organisms → Bacteria	2961	Open in IMG/M
3300003324\|soilH2_10067149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2728	Open in IMG/M
3300003324\|soilH2_10095467	All Organisms → cellular organisms → Bacteria	13166	Open in IMG/M
3300004114\|Ga0062593_100044724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2695	Open in IMG/M
3300004114\|Ga0062593_100926181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	884	Open in IMG/M
3300004156\|Ga0062589_100000199	All Organisms → cellular organisms → Bacteria	11622	Open in IMG/M
3300004156\|Ga0062589_100097672	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300004157\|Ga0062590_100161511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1555	Open in IMG/M
3300004157\|Ga0062590_100224244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1386	Open in IMG/M
3300004479\|Ga0062595_100657669	Not Available	831	Open in IMG/M
3300005093\|Ga0062594_101479440	Not Available	695	Open in IMG/M
3300005093\|Ga0062594_103207393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005289\|Ga0065704_10001906	All Organisms → cellular organisms → Bacteria	9386	Open in IMG/M
3300005289\|Ga0065704_10168732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1305	Open in IMG/M
3300005293\|Ga0065715_10102968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3071	Open in IMG/M
3300005294\|Ga0065705_10123551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2804	Open in IMG/M
3300005329\|Ga0070683_102171688	Not Available	533	Open in IMG/M
3300005330\|Ga0070690_100074460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2212	Open in IMG/M
3300005330\|Ga0070690_100724472	Not Available	766	Open in IMG/M
3300005331\|Ga0070670_100762425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300005332\|Ga0066388_100085536	All Organisms → cellular organisms → Bacteria → Proteobacteria	3550	Open in IMG/M
3300005332\|Ga0066388_107312794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005340\|Ga0070689_100115552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2139	Open in IMG/M
3300005355\|Ga0070671_100048388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3535	Open in IMG/M
3300005364\|Ga0070673_100637950	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005364\|Ga0070673_100795541	Not Available	873	Open in IMG/M
3300005365\|Ga0070688_100016444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4230	Open in IMG/M
3300005367\|Ga0070667_100929728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300005440\|Ga0070705_100246272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300005440\|Ga0070705_100320772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300005441\|Ga0070700_100147633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300005441\|Ga0070700_100634149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	842	Open in IMG/M
3300005444\|Ga0070694_101395219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300005445\|Ga0070708_100071664	All Organisms → cellular organisms → Bacteria → Proteobacteria	3120	Open in IMG/M
3300005456\|Ga0070678_100282697	Not Available	1404	Open in IMG/M
3300005468\|Ga0070707_101219900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300005840\|Ga0068870_10010876	All Organisms → cellular organisms → Bacteria → Proteobacteria	4198	Open in IMG/M
3300005841\|Ga0068863_100191487	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300005841\|Ga0068863_100516066	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300005937\|Ga0081455_10122832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2043	Open in IMG/M
3300006028\|Ga0070717_10643101	Not Available	963	Open in IMG/M
3300006046\|Ga0066652_100478677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300006844\|Ga0075428_100252636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1900	Open in IMG/M
3300006852\|Ga0075433_11831598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300006854\|Ga0075425_102256773	Not Available	606	Open in IMG/M
3300006903\|Ga0075426_11284435	Not Available	555	Open in IMG/M
3300009090\|Ga0099827_10443892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300009094\|Ga0111539_10055472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4710	Open in IMG/M
3300009098\|Ga0105245_12963857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009148\|Ga0105243_12611520	Not Available	545	Open in IMG/M
3300009174\|Ga0105241_12646544	Not Available	504	Open in IMG/M
3300010047\|Ga0126382_11389276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300010360\|Ga0126372_13175682	Not Available	510	Open in IMG/M
3300010362\|Ga0126377_10042043	All Organisms → cellular organisms → Bacteria	3939	Open in IMG/M
3300010362\|Ga0126377_10482830	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300010362\|Ga0126377_12118105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300010398\|Ga0126383_10789740	Not Available	1032	Open in IMG/M
3300010399\|Ga0134127_12575108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300011119\|Ga0105246_10254463	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300011444\|Ga0137463_1042165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1691	Open in IMG/M
3300012912\|Ga0157306_10067333	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300012917\|Ga0137395_10505347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300012948\|Ga0126375_11240743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300012955\|Ga0164298_11377361	Not Available	544	Open in IMG/M
3300012957\|Ga0164303_10581409	Not Available	733	Open in IMG/M
3300012986\|Ga0164304_10725483	Not Available	758	Open in IMG/M
3300013296\|Ga0157374_10955479	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300013297\|Ga0157378_10859748	Not Available	936	Open in IMG/M
3300013297\|Ga0157378_11185834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300013308\|Ga0157375_11002373	Not Available	975	Open in IMG/M
3300013308\|Ga0157375_12515070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300014968\|Ga0157379_11848590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300015077\|Ga0173483_10533396	Not Available	632	Open in IMG/M
3300015371\|Ga0132258_10076617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7781	Open in IMG/M
3300015371\|Ga0132258_11492173	All Organisms → cellular organisms → Bacteria → Acidobacteria	1707	Open in IMG/M
3300015374\|Ga0132255_101838344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300021445\|Ga0182009_10012685	All Organisms → cellular organisms → Bacteria	2980	Open in IMG/M
3300025315\|Ga0207697_10258082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300025899\|Ga0207642_11021340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300025901\|Ga0207688_10332244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300025904\|Ga0207647_10193848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300025908\|Ga0207643_10001253	All Organisms → cellular organisms → Bacteria → Acidobacteria	14916	Open in IMG/M
3300025908\|Ga0207643_10093873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1752	Open in IMG/M
3300025921\|Ga0207652_11644584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300025922\|Ga0207646_10601989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	986	Open in IMG/M
3300025925\|Ga0207650_10202063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1592	Open in IMG/M
3300025925\|Ga0207650_10640751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300025926\|Ga0207659_11584884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300025931\|Ga0207644_10131057	All Organisms → cellular organisms → Bacteria → Proteobacteria	1919	Open in IMG/M
3300025936\|Ga0207670_10171618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1627	Open in IMG/M
3300025938\|Ga0207704_10269192	Not Available	1289	Open in IMG/M
3300025942\|Ga0207689_10591044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300025945\|Ga0207679_10267411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Fluviibacterium → unclassified Fluviibacterium → Fluviibacterium sp. MJW13	1461	Open in IMG/M
3300025945\|Ga0207679_10304073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1376	Open in IMG/M
3300025945\|Ga0207679_10308217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1367	Open in IMG/M
3300025960\|Ga0207651_10180457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1674	Open in IMG/M
3300025960\|Ga0207651_10273445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Fluviibacterium → unclassified Fluviibacterium → Fluviibacterium sp. MJW13	1392	Open in IMG/M
3300025986\|Ga0207658_10626761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300026023\|Ga0207677_10950566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	777	Open in IMG/M
3300026075\|Ga0207708_10184077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Fluviibacterium → unclassified Fluviibacterium → Fluviibacterium sp. MJW13	1659	Open in IMG/M
3300026088\|Ga0207641_10423806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300026116\|Ga0207674_10633871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1032	Open in IMG/M
3300026121\|Ga0207683_11113374	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300027876\|Ga0209974_10191568	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031740\|Ga0307468_100519922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300031908\|Ga0310900_11010884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300031943\|Ga0310885_10872935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300032075\|Ga0310890_10716272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300032180\|Ga0307471_102482248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300032421\|Ga0310812_10023172	Not Available	2212	Open in IMG/M
3300033412\|Ga0310810_10304058	Not Available	1711	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.17%
Host-Associated	Host-Associated	47.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.30%
Plants	Host-Associated → Plants	47.83%
Aquatic	Environmental → Aquatic	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.30%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.74%
Sediment	Environmental → Aquatic → Sediment	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.04%
Loam	Environmental → Terrestrial → Soil → Loam	18.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.22%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.22%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.09%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.35%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1017008981	3300000559	Soil	LGDGTSLAERGSVMSDIIPPTYVEPTVMWRMRRGDDSTAHALIDIVEGRARVFWFVNGRPMGERYFDDWTAAIQWSDRLRAHCWTVGWRLSDDILEGPPARSEL*
F14TC_1026935661	3300000559	Soil	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVEGRARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLSDD
JGI24737J22298_102727191	3300001990	Corn Rhizosphere	VWRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
soilL1_1004837711	3300003267	Sugarcane Root And Bulk Soil	MVLALPNVGSDMSEIILPSTYNEPTVMWRMRRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTAAIQWSDTLRAQYWTVGWRLLQDDPTSRPPTQPES*
soilL2_100088405	3300003319	Sugarcane Root And Bulk Soil	MSEIILPSTYNEPTVMWRMRRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTAAIQWSDTLRAQYWTVGWRLLQDDPTSRPPTQPES*
soilH2_100671493	3300003324	Sugarcane Root And Bulk Soil	MSDPILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTDALHWSDRLRAQYWMVGWRLLSDHRSPSSLR*
soilH2_1009546710	3300003324	Sugarcane Root And Bulk Soil	MVPALPHVGSDMSEIILPSTYNEPTVMWRMRRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTAAIQWSDTLRAQYWTVGWRLLQDDPTSRPPTQPES*
Ga0062593_1000447243	3300004114	Soil	MADPILPSTYNEPTVMWRMQRANGSSAHALIDTVETRPRVVWFVNGRPVGARYFDDWTDALQWSDRLRVQYWMVGWRLQSDHRSPSSLR*
Ga0062593_1009261812	3300004114	Soil	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD*
Ga0062589_1000001998	3300004156	Soil	MSESILPSTYNEPTVMWRMQHANGSSAHALIDTVEGRPRVVWFVNGRPVGARYSDDWSGAIQWSDRLRAQYWAVGWRVVSDDFTESPPVRRES*
Ga0062589_1000976721	3300004156	Soil	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYFGDWTDAIQWSDRLQAQYWTVGWRQKL*
Ga0062590_1001615112	3300004157	Soil	MSEIILPSTYNEPTVMWRMRRANDSTAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIRWSDKLRAQYWTVGWRPLPDDPTEIPPARHES*
Ga0062590_1002242441	3300004157	Soil	AMADPILPSTYNEPTVMWRMQRANGSSAHALIDTVETRPRVVWFVNGRPVGARYFDDWTDALQWSDRLRVQYWMVGWRLQSDHRSPSSLR*
Ga0062595_1006576691	3300004479	Soil	TVMWRMQHANGSSAHALIDTVEGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDFTESPRAS*
Ga0062594_1014794402	3300005093	Soil	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVEGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDFTESPHAS*
Ga0062594_1032073932	3300005093	Soil	MILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQ
Ga0065704_100019063	3300005289	Switchgrass Rhizosphere	MSDSILPSTYNEPTVMWRMQHANGSSAHALIDTVDGSARVVWFVNGRPVGARYFDDWAGAIQWSDRLRAQYWTVGWRLLSDDSTEGFRARRES*
Ga0065704_101687321	3300005289	Switchgrass Rhizosphere	EMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0065715_101029681	3300005293	Miscanthus Rhizosphere	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0065705_101235515	3300005294	Switchgrass Rhizosphere	MVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0070683_1021716882	3300005329	Corn Rhizosphere	RGNAMSEMILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWAGAIQWSDKLRAQYWTVGWRPQSDDPTGSPPPRHD*
Ga0070690_1000744603	3300005330	Switchgrass Rhizosphere	MTVWRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0070690_1007244722	3300005330	Switchgrass Rhizosphere	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWAGAIQWSDKLRAQYWTVGWRPQSDDPTGSPPPRHD*
Ga0070670_1007624252	3300005331	Switchgrass Rhizosphere	PVQAMADPILPSTYNEPTVMWRMQRANGSSAHALIDTVETRPRVVWFVNGRPVGARYFDDWTDALQWSDRLRVQYWMVGWRLQSDHRSPSSLR*
Ga0066388_1000855361	3300005332	Tropical Forest Soil	MSQNILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRLQPDDPTGSPPRRD*
Ga0066388_1073127941	3300005332	Tropical Forest Soil	MSDIIRRSTYNEPTIMWRMQRADGSSAHALIDTVEGRARVVWFVNGQPLGERYFDNCTDAIQFTDLLRAQCWTVGWRLSDDVTEGPPARSK
Ga0070689_1001155523	3300005340	Switchgrass Rhizosphere	MTVWRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVDGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0070671_1000483883	3300005355	Switchgrass Rhizosphere	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVDGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLSDDFTESPRAS*
Ga0070673_1006379501	3300005364	Switchgrass Rhizosphere	MSEIILPSTYNEPTVMWRMEHPNHSSAHALIDTVEARPRVVWFVNGRPVGARYFDHWTDAIQWSDRLRAQYWTVGWRLLSEDPTESPPRRES*
Ga0070673_1007955412	3300005364	Switchgrass Rhizosphere	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVDGKARAAWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDFTESPHAS*
Ga0070688_1000164446	3300005365	Switchgrass Rhizosphere	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD*
Ga0070667_1009297281	3300005367	Switchgrass Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGP
Ga0070705_1002462721	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	WRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0070705_1003207721	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIAVPPTYNEPTVMWRMQRRDGCRAHALIDTAKGRTRVVWFVNSRPVGARYVEDWTAAIQWTERLQGQYWIFGWRLCDDVTEDRPGRSKTG*
Ga0070700_1001476332	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVILPSTYNEPTVMWRMQRANDSSAHALIDSVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRLLSDDPSENPPARRES*
Ga0070700_1006341492	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	AMSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD*
Ga0070694_1013952192	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSDIIPPSYVEPTVMWRMRRGDDSTAHALIDTVEGRARVFWFVNGRPMGERYFDDWTAAIQWSDRLRAHCWTVGWRLSDDILEGPPARSEL*
Ga0070708_1000716643	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSDIIRPSIYNEPTIMWRMRRADDSSAHALIDAVEGRARVVWFVNGRPLGERYFDDWTGAIQFTDRLRTHCWTVGWRLSDDVTEGPPARSKS*
Ga0070678_1002826971	3300005456	Miscanthus Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWAGAIQWSDKLRAQYWTVGWRPQSDDPTGSPPPRHD*
Ga0070707_1012199001	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSDIIQPSTYNEPTILWRMQRADDSSLHALIDTVEGRARVAWFVNGRPLGERHFDDWTGAIQFADRLRAQCWTVGWRPSDDVNEGPPARSKS*
Ga0068870_100108766	3300005840	Miscanthus Rhizosphere	LKWPMTVWRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0068863_1001914871	3300005841	Switchgrass Rhizosphere	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVDGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDFTESPHA
Ga0068863_1005160661	3300005841	Switchgrass Rhizosphere	STYNEPTVMWRMQRANDSSAHALIDSVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD*
Ga0081455_101228321	3300005937	Tabebuia Heterophylla Rhizosphere	MSDIILPATYNEPTVMWRMQRANGSSAHALIDTVEGRVRVVWFVNGRPVGARYSDDWTGAIQWSDRLRAQYWAVGWRVVSDDFT
Ga0070717_106431012	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSEIILPSTYNEPTVMWRMRRAGGDRAHALIDTVEGTTRVVWFVNGRSLGARYFDDWTGAMQWSDRLRAHSWSVGWRLSDDVTEGPPDRSEP*
Ga0066652_1004786772	3300006046	Soil	MSDIIRPSIYNEPTIMWRMQRADDSSAHALIDTVEGRARVVWFVNGRPMGERYFDDWTGAIQFTDRLRAQCWTVGWRLSDDVTEGPPAQSKS*
Ga0075428_1002526363	3300006844	Populus Rhizosphere	MSDIIPPTYVEPTVMWRMRRGDDSTAHALIDTVEGRARVFWFVNGRPMGERYFDDWTAAIQWSDRLRAHCWTVGWRLSDDILEGPPARSEL*
Ga0075433_118315981	3300006852	Populus Rhizosphere	SDIIPPTYVEPTVMWRMRRGDDSTAHALIDTVEGRARVFWFVNGRPMGERYFDDWTAAIQWSDRLRAHCWTVGWRLSDDILEGPPARSEL*
Ga0075425_1022567732	3300006854	Populus Rhizosphere	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVDGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLSDDFTESPRA
Ga0075426_112844352	3300006903	Populus Rhizosphere	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVDGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLSDDFTERPRAS*
Ga0099827_104438922	3300009090	Vadose Zone Soil	SDIIRSSIYNEPTIMWRMQRADDSSAHALIDTVDGRARVVWFVNGRPLGQRYFDDWTSAIQFTDRLRAQCWTVGWRLSDDVAGRPARRES*
Ga0111539_100554725	3300009094	Populus Rhizosphere	VSEIILPSTYNEPTVMWRMQRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTAAISWSDRLRAQYWTVGWRLLSDTETPPP
Ga0105245_129638571	3300009098	Miscanthus Rhizosphere	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYFDHWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0105243_126115201	3300009148	Miscanthus Rhizosphere	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRAVGARYFDDWTGAIQWSDKLRAQYWTVGWRPQP
Ga0105241_126465441	3300009174	Corn Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWAGAIQWSDKLRAQYWTVGWRPQSDDPTGSPP
Ga0126382_113892761	3300010047	Tropical Forest Soil	MSDVILPSTYNEPTVMWRMRRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTAAIQWSDKLRAQYWTVGWRPLPDDPAESPPC*
Ga0126372_131756821	3300010360	Tropical Forest Soil	MSDIIVPSTYIEPTVMWRMRRADDSSAHALIDAVEGRARVVWFVNGRIVGERYFDDWTAAIQWSDRLRAHCWTVGWRLSE*
Ga0126377_100420435	3300010362	Tropical Forest Soil	MSEVILPSTYNEPTVMWRMQRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRLLSDDPRENPPARREG*
Ga0126377_104828302	3300010362	Tropical Forest Soil	VWMTGTSLAERASAMSDIIVPSTYIEPTVMWRMRRADDFTAHALIDTVEGMARVVWFVNGRIVGERYFDDWTAAIQWSDRLRAHCWMVGWRLSE*
Ga0126377_121181051	3300010362	Tropical Forest Soil	MSDIIRPSTYNEPTIMWRMQRPDDSCAHALIDTVEGRVRVVWLVNGRPMGERYFDDWTGAIQFTDRLRAQCWTVGWRLSDDVTEGPPAQSKS*
Ga0126383_107897401	3300010398	Tropical Forest Soil	MSEIIMPSTYKEPTVMWRMWRVGGCSAHALIDAAEGRRRVLWFVNGQPLGSRYFDDWTGAIQWSDRLRAQYWSVGWRLSDDVTEDAPPAGSPEAS*
Ga0134127_125751082	3300010399	Terrestrial Soil	ANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDNVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL*
Ga0105246_102544633	3300011119	Miscanthus Rhizosphere	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPQSDDPTGSPPPRHD*
Ga0137463_10421653	3300011444	Soil	MSDIIRPSIYNEPTIMWRMQRADDSSAHALIDTVEGRARVVWFVNGRPLGERYFDDWTGAIQFIDRLRAQCWTVGWRLSDDATEGPPARSKS*
Ga0157306_100673332	3300012912	Soil	MSEIILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYFGDWTDAIQWSDRLQAQYWTVGWRQKL*
Ga0137395_105053471	3300012917	Vadose Zone Soil	MSDIIRSSIYNEPTIMWRMQRADDSSAHALIDTVEGRARVVWFVNGRPLGERYFDDWTGAIQFTDRLRTQCWTVGWRLSDDVTEGPPARSKS*
Ga0126375_112407431	3300012948	Tropical Forest Soil	MSEIILPSTYNEPTVMWRMQRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWAVGWRLVSDFTEGPPARRES*
Ga0164298_113773612	3300012955	Soil	MSEIILPSTFNEPTVMWLMQHANGSSSHALIDTVEGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDFTESPRAS*
Ga0164303_105814092	3300012957	Soil	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVEGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDFTESPRAS*
Ga0164304_107254832	3300012986	Soil	TFNEPTVMWRMQHANGSSAHALIDTVEGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDFTESPRAS*
Ga0157374_109554793	3300013296	Miscanthus Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWR
Ga0157378_108597481	3300013297	Miscanthus Rhizosphere	NEPTVMWRMQHANGSSAHALIDTVDGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDSTESPHAS*
Ga0157378_111858342	3300013297	Miscanthus Rhizosphere	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPGVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRPQPDDPTGSPPAQRD*
Ga0157375_110023731	3300013308	Miscanthus Rhizosphere	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVEGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLSDDFTESPRAS*
Ga0157375_125150702	3300013308	Miscanthus Rhizosphere	STYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYFGDWTDAIQWSDRLQAQYWTVGWRQKL*
Ga0157379_118485902	3300014968	Switchgrass Rhizosphere	DGTGLAGGVTAMSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD*
Ga0173483_105333962	3300015077	Soil	STYNEPTVMWRMQHANGSSAHALIDTVEGRPRVVWFVNGRPVGARYSDDWSGAIQWSDRLRAQYWAVGWRVVSDDFTESPPVRRES*
Ga0132258_100766173	3300015371	Arabidopsis Rhizosphere	MSEIILPSTYNEPTVMWRMQRANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDEWTGAIQWSDRLRAQYWTVGWRLLSDDPPEGPPARRES*
Ga0132258_114921733	3300015371	Arabidopsis Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTGAVQWSDKLRAQYWTVGWRPQPEDPTGSPPAQRD*
Ga0132255_1018383442	3300015374	Arabidopsis Rhizosphere	MSEVILPSTYNEPTVMWRMQRANDSSAHALIDSVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRLLSDDPSETPPARRES*
Ga0182009_100126852	3300021445	Soil	MSEIILPSTYNEPTVMWRMEHPNHSSAHALIDTVEARPRVVWFVNGRPVGARYFDHWTDAIQWSDRLRAQYWTVGWRLLSEDPTESPPRRES
Ga0207697_102580822	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLLPDDSTESPHAS
Ga0207642_110213401	3300025899	Miscanthus Rhizosphere	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD
Ga0207688_103322442	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL
Ga0207647_101938483	3300025904	Corn Rhizosphere	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL
Ga0207643_100012534	3300025908	Miscanthus Rhizosphere	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRQKL
Ga0207643_100938734	3300025908	Miscanthus Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD
Ga0207652_116445842	3300025921	Corn Rhizosphere	MTVWRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL
Ga0207646_106019891	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSDIIQPSTYNEPTILWRMQRADDSSLHALIDTVEGRARVAWFVNGRPLGERHFDDWTGAIQFADRLRAQCWTVGWRPSDDVNEGPPARSKS
Ga0207650_102020634	3300025925	Switchgrass Rhizosphere	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYFGDWTDAIQWSDRLQAQYWTVGWRQKL
Ga0207650_106407512	3300025925	Switchgrass Rhizosphere	LAPCRNAMADPILPSTYNEPTVMWRMQRANGSSAHALIDTVETRPRVVWFVNGRPVGARYFDDWTDALQWSDRLRVQYWMVGWRLQSDHRSPSSLR
Ga0207659_115848841	3300025926	Miscanthus Rhizosphere	MSEVILPSTYNEPTVMWRMQRANDSSAHALIDSVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRLLSDDPSENPPARRES
Ga0207644_101310571	3300025931	Switchgrass Rhizosphere	MSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVEGKARAVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLSDDFTESPRAS
Ga0207670_101716183	3300025936	Switchgrass Rhizosphere	MTVWRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSTAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL
Ga0207704_102691921	3300025938	Miscanthus Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLP
Ga0207689_105910443	3300025942	Miscanthus Rhizosphere	GNAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYFGDWTDAIQWSDRLQAQYWTVGWRQKL
Ga0207679_102674113	3300025945	Corn Rhizosphere	MWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD
Ga0207679_103040733	3300025945	Corn Rhizosphere	MSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGW
Ga0207679_103082172	3300025945	Corn Rhizosphere	MADPILPSTYNEPTVMWRMQRANGSSAHALIDTVETRPRVVWFVNGRPVGARYFDDWTDALQWSDRLRVQYWMVGWRLQSDHRSPSSLR
Ga0207651_101804571	3300025960	Switchgrass Rhizosphere	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWAGAIQWSDKLRAQYWTVGWRPQSDDPTGSPPPRHD
Ga0207651_102734451	3300025960	Switchgrass Rhizosphere	YNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD
Ga0207658_106267612	3300025986	Switchgrass Rhizosphere	QPCRTWEAMSEIILPSTFNEPTVMWRMQHANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGWRLAISQL
Ga0207677_109505661	3300026023	Miscanthus Rhizosphere	GGGSAMSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSGKLRAQYWTVGWRPLPDDPPEGPPARRD
Ga0207708_101840773	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AMSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGWRPLPDDPPEGPPARRD
Ga0207641_104238063	3300026088	Switchgrass Rhizosphere	ILPSTYNEPTVMWRMQRANDSSAHALIDSVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWTVGWRLLPDDSTESPHAS
Ga0207674_106338711	3300026116	Corn Rhizosphere	RHVASCDLWQPEGWYQPCPVQAMADPILPSTYNEPTVMWRMQRANGSSAHALIDTVETRPRVVWFVNGRPVGARYFDDWTDALQWSDRLRVQYWMVGWRLQSDHRSPSSLR
Ga0207683_111133742	3300026121	Miscanthus Rhizosphere	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWAGAIQWSDKLRAQYWTVGWRPQSDDPTGSPPPRPSPSAACSCRGC
Ga0209974_101915682	3300027876	Arabidopsis Thaliana Rhizosphere	MSESILPSTYNEPTVMWRMQHANGSSAHALIDTVEGRPRVVWFVNGRPVGARYSDDWSGAIQWSDKLRAQYWTVGWRQKL
Ga0307468_1005199222	3300031740	Hardwood Forest Soil	MSDIIPPTYVEPTVMWRMRRADDSTAHALIDTVEGRARVFWFVNGRPMGERYFDDWTAAIQWSDRLRAHCWTVGWRLSDDILEGPPARSEL
Ga0310900_110108841	3300031908	Soil	MVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQA
Ga0310885_108729352	3300031943	Soil	MSEVILPSTYNEPTVMWRMQRANDSSAHALIDSVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDKLRAQYWTVGWRL
Ga0310890_107162723	3300032075	Soil	MTVWRMVPALPHVANAMSEMILPSTYNEPTVMWRMQRANGSSAHALIDTVEGRPRVVWFVNGRPIGARYCDDWTGAIQWSDRLQAQYWTVGW
Ga0307471_1024822482	3300032180	Hardwood Forest Soil	MSDIIRPSTYNEPTIMWRMQRADDSSLHALIDTVEGRARVVWFVNGRPLGERYFHDWTGAIQFADRLRAQCWTVGWRLSDDVSEGPPARSKS
Ga0310812_100231721	3300032421	Soil	MSEIILPSTYNEPTVMWRMRHTNDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTGAIQWSDRLRAQYWT
Ga0310810_103040581	3300033412	Soil	MSEIILPSTYNEPTIMWRMRHANDSSAHALIDTVEGRPRVVWFVNGRPVGARYFDDWTVAIQWSDKLRAQYWTVGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079765

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences