Metagenome / Metatranscriptome Family F079743

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079743
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	83 residues
Representative Sequence	PTVELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Number of Associated Samples	97
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.74 %
% of genes near scaffold ends (potentially truncated)	98.26 %
% of genes from short scaffolds (< 2000 bps)	96.52 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.391 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.913 % of family members)
Environment Ontology (ENVO)	Unclassified (52.174 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.435 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 21.50% Coil/Unstructured: 78.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01436	NHL	7.83
PF13620	CarboxypepD_reg	2.61
PF00756	Esterase	0.87
PF13302	Acetyltransf_3	0.87
PF01435	Peptidase_M48	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
All Organisms	root	All Organisms	42.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
cellular organisms	root	All Organisms → cellular organisms	42.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	15.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.35 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	15.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.74 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.87 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.87 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.74 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.87 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.87 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.87 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.74 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.87 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.87 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	1.74 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.87 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.87 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.39 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	15.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.35 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1.74 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.87 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.87 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.87 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003203\|JGI25406J46586_10182953	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300004798\|Ga0058859_11822816	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300005093\|Ga0062594_100725643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300005328\|Ga0070676_10837774	Not Available	681	Open in IMG/M
3300005331\|Ga0070670_102038748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	529	Open in IMG/M
3300005333\|Ga0070677_10528139	Not Available	644	Open in IMG/M
3300005334\|Ga0068869_101044047	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300005340\|Ga0070689_100247223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1471	Open in IMG/M
3300005340\|Ga0070689_100409085	Not Available	1148	Open in IMG/M
3300005356\|Ga0070674_100001699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11919	Open in IMG/M
3300005364\|Ga0070673_101431817	Not Available	651	Open in IMG/M
3300005364\|Ga0070673_101669273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	603	Open in IMG/M
3300005441\|Ga0070700_100107244	Not Available	1851	Open in IMG/M
3300005444\|Ga0070694_101386087	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	593	Open in IMG/M
3300005455\|Ga0070663_101920400	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	532	Open in IMG/M
3300005456\|Ga0070678_100313858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300005457\|Ga0070662_100650537	Not Available	889	Open in IMG/M
3300005459\|Ga0068867_100398995	Not Available	1159	Open in IMG/M
3300005459\|Ga0068867_101125518	Not Available	718	Open in IMG/M
3300005539\|Ga0068853_101068088	Not Available	778	Open in IMG/M
3300005545\|Ga0070695_101255028	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300005577\|Ga0068857_100946997	Not Available	827	Open in IMG/M
3300005577\|Ga0068857_101079322	Not Available	775	Open in IMG/M
3300005578\|Ga0068854_102067095	Not Available	526	Open in IMG/M
3300005578\|Ga0068854_102201733	Not Available	510	Open in IMG/M
3300005617\|Ga0068859_101824156	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300005719\|Ga0068861_101354803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	694	Open in IMG/M
3300005719\|Ga0068861_102207002	Not Available	552	Open in IMG/M
3300005840\|Ga0068870_10065090	Not Available	1971	Open in IMG/M
3300005840\|Ga0068870_10482817	Not Available	823	Open in IMG/M
3300005841\|Ga0068863_100260066	Not Available	1678	Open in IMG/M
3300005844\|Ga0068862_102643338	Not Available	514	Open in IMG/M
3300006845\|Ga0075421_101369906	Not Available	780	Open in IMG/M
3300006847\|Ga0075431_101075658	Not Available	769	Open in IMG/M
3300006852\|Ga0075433_10776015	Not Available	838	Open in IMG/M
3300006880\|Ga0075429_100947935	Not Available	753	Open in IMG/M
3300006881\|Ga0068865_100315884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1255	Open in IMG/M
3300006954\|Ga0079219_10993313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	695	Open in IMG/M
3300009092\|Ga0105250_10522678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	541	Open in IMG/M
3300009094\|Ga0111539_11862356	Not Available	698	Open in IMG/M
3300009094\|Ga0111539_12499736	Not Available	599	Open in IMG/M
3300009098\|Ga0105245_11079069	Not Available	849	Open in IMG/M
3300009147\|Ga0114129_11521373	Not Available	822	Open in IMG/M
3300009156\|Ga0111538_11577081	Not Available	827	Open in IMG/M
3300009156\|Ga0111538_11832790	Not Available	763	Open in IMG/M
3300009177\|Ga0105248_12914241	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300010047\|Ga0126382_10102572	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300010373\|Ga0134128_13172071	Not Available	505	Open in IMG/M
3300010399\|Ga0134127_11566498	Not Available	732	Open in IMG/M
3300011412\|Ga0137424_1087834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	626	Open in IMG/M
3300011430\|Ga0137423_1174674	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	648	Open in IMG/M
3300011438\|Ga0137451_1132390	Not Available	774	Open in IMG/M
3300011445\|Ga0137427_10074621	Not Available	1354	Open in IMG/M
3300012509\|Ga0157334_1029695	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012517\|Ga0157354_1007662	Not Available	1007	Open in IMG/M
3300012895\|Ga0157309_10054127	Not Available	1005	Open in IMG/M
3300012903\|Ga0157289_10274670	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300012908\|Ga0157286_10364321	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012910\|Ga0157308_10468363	Not Available	505	Open in IMG/M
3300013308\|Ga0157375_10467933	Not Available	1426	Open in IMG/M
3300013308\|Ga0157375_11009252	Not Available	972	Open in IMG/M
3300014326\|Ga0157380_12461763	Not Available	586	Open in IMG/M
3300014745\|Ga0157377_10567063	Not Available	805	Open in IMG/M
3300015077\|Ga0173483_10103798	Not Available	1189	Open in IMG/M
3300017792\|Ga0163161_11618421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	572	Open in IMG/M
3300017965\|Ga0190266_11117540	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300018067\|Ga0184611_1303792	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	554	Open in IMG/M
3300018469\|Ga0190270_12338991	Not Available	596	Open in IMG/M
3300018476\|Ga0190274_13349523	Not Available	540	Open in IMG/M
3300018476\|Ga0190274_13431698	Not Available	534	Open in IMG/M
3300018476\|Ga0190274_13762575	Not Available	513	Open in IMG/M
3300018481\|Ga0190271_12880436	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300019362\|Ga0173479_10302533	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300019362\|Ga0173479_10338675	Not Available	701	Open in IMG/M
3300019377\|Ga0190264_10722235	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	741	Open in IMG/M
3300022904\|Ga0247769_1116922	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300023169\|Ga0247762_1099878	Not Available	806	Open in IMG/M
3300025893\|Ga0207682_10084080	Not Available	1369	Open in IMG/M
3300025893\|Ga0207682_10152932	Not Available	1041	Open in IMG/M
3300025900\|Ga0207710_10742798	Not Available	515	Open in IMG/M
3300025901\|Ga0207688_10192623	Not Available	1220	Open in IMG/M
3300025904\|Ga0207647_10400212	Not Available	774	Open in IMG/M
3300025922\|Ga0207646_11747002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	533	Open in IMG/M
3300025923\|Ga0207681_10717402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	832	Open in IMG/M
3300025926\|Ga0207659_10156976	Not Available	1782	Open in IMG/M
3300025930\|Ga0207701_10495216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300025930\|Ga0207701_10731951	All Organisms → cellular organisms → Bacteria → Acidobacteria	836	Open in IMG/M
3300025930\|Ga0207701_11483770	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300025933\|Ga0207706_10495642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300025935\|Ga0207709_10031369	All Organisms → cellular organisms → Bacteria	3103	Open in IMG/M
3300025940\|Ga0207691_11106127	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300025942\|Ga0207689_10642774	Not Available	893	Open in IMG/M
3300025942\|Ga0207689_10801661	Not Available	795	Open in IMG/M
3300025960\|Ga0207651_10080971	Not Available	2339	Open in IMG/M
3300025972\|Ga0207668_11681604	Not Available	573	Open in IMG/M
3300025986\|Ga0207658_10163425	Not Available	1826	Open in IMG/M
3300026088\|Ga0207641_11072104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	804	Open in IMG/M
3300026088\|Ga0207641_11522508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	671	Open in IMG/M
3300026116\|Ga0207674_10706214	Not Available	973	Open in IMG/M
3300028381\|Ga0268264_11755054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	631	Open in IMG/M
3300031547\|Ga0310887_10016213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2855	Open in IMG/M
3300031548\|Ga0307408_100564668	Not Available	1006	Open in IMG/M
3300031562\|Ga0310886_10506576	Not Available	729	Open in IMG/M
3300031847\|Ga0310907_10442781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	685	Open in IMG/M
3300031858\|Ga0310892_10996503	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031908\|Ga0310900_10442310	Not Available	998	Open in IMG/M
3300031940\|Ga0310901_10538374	Not Available	528	Open in IMG/M
3300032000\|Ga0310903_10170161	Not Available	998	Open in IMG/M
3300032002\|Ga0307416_103726833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	510	Open in IMG/M
3300032005\|Ga0307411_11077585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	723	Open in IMG/M
3300032017\|Ga0310899_10271536	Not Available	777	Open in IMG/M
3300032179\|Ga0310889_10052762	Not Available	1596	Open in IMG/M
3300033475\|Ga0310811_10395940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1515	Open in IMG/M
3300034151\|Ga0364935_0242457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	587	Open in IMG/M
3300034661\|Ga0314782_204339	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.39%
Environmental	Environmental	42.61%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.52%
Terrestrial	Environmental → Terrestrial	38.26%
Aquatic	Environmental → Aquatic	4.35%
Human	Host-Associated → Human	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.48%
Sediment	Environmental → Aquatic → Sediment	4.35%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.74%
Floodplain	Environmental → Terrestrial → Floodplain	0.87%
Digestive System	Host-Associated → Human → Digestive System	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	22.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.78%
Loam	Environmental → Terrestrial → Soil → Loam	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.87%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	22.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.09%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.09%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300022904	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L166-409R-6	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25406J46586_101829531	3300003203	Tabebuia Heterophylla Rhizosphere	RLIEGGRYNVNLRWNGTPSVELHEQTIDTWYVLAGGATVNTGYQVKDGGRVANTGVSAVTRPGDVFFHPANFYHGFSEVMPDIFWLNIRWDDNYAK*
Ga0058859_118228161	3300004798	Host-Associated	GGRYNVNLRWNGTPTVELHEQTIDTWVMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYTK*
Ga0062594_1007256432	3300005093	Soil	QTIDTWYMLAGGATVNTGYQVKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070676_108377741	3300005328	Miscanthus Rhizosphere	EQTIDTWYVLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSAVTPDIFWLNIRWDDNYAK*
Ga0070670_1020387482	3300005331	Switchgrass Rhizosphere	QTIDTWYMLAGGATVNTGYEVKDGQRVPNTGVSVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070677_105281392	3300005333	Miscanthus Rhizosphere	IDTWYMLAGGATVNTGYEVKDGQRVPNTGVSVVSKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYTKN*
Ga0068869_1010440471	3300005334	Miscanthus Rhizosphere	TWVVLAGGATVNTGYEVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK*
Ga0070689_1002472231	3300005340	Switchgrass Rhizosphere	NVNLRWNGTPSVEVHDKTIDTWYVLAGGATVNTGYEVKDGTRVPNTGVSVATKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYGK*
Ga0070689_1004090851	3300005340	Switchgrass Rhizosphere	YNVNLRWNGTPSVEVHEQTIDTWYMLAGGATVNTGYQVKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070674_1000016991	3300005356	Miscanthus Rhizosphere	GGRYNVNLRWNGTPSTELHGQTIDTWVVLAGGATVNTGFEMKDGERVPNTGVSVATKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYKKE*
Ga0070673_1014318172	3300005364	Switchgrass Rhizosphere	RYNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070673_1016692731	3300005364	Switchgrass Rhizosphere	VEVHDKTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070700_1001072441	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	NGTPTVELHEQTIDTWVMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYTK*
Ga0070694_1013860871	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	NLRWNGTPSVEVHEQTIDTWYMLAGGATVNTGYQVKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070663_1019204001	3300005455	Corn Rhizosphere	GGRYNVNLRWNGTPSVELHEQTIDTWYVLAGGATVNTGYQVKDGQRVPNTGVSVASKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKTN*
Ga0070678_1003138582	3300005456	Miscanthus Rhizosphere	IEGGRYNVNLRWNGTPSVEVHEQTIDTWYMLAGGATVNTGYQVKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070662_1006505372	3300005457	Corn Rhizosphere	YNVNLRWNGTPSVEVHDQTIDTWYMLAGGATVNTGYDVKDGQRVPGTGVSVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWDDNYAKQ*
Ga0068867_1003989952	3300005459	Miscanthus Rhizosphere	QTIDTWYMLAGGATVNTGYEVKDGARVPGTGVSVVSKPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYAKN*
Ga0068867_1011255181	3300005459	Miscanthus Rhizosphere	DTWVVLAGGATVNTGYDVKDGERVPNTGVSVVTKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYAK*
Ga0068853_1010680882	3300005539	Corn Rhizosphere	AGGATVNTGYQVKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0070695_1012550281	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	RYNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYGAPRGAP*
Ga0068857_1009469971	3300005577	Corn Rhizosphere	DTWVVLAGGATVNTGYQVKDGQRVPNTGVSVATRPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYKKN*
Ga0068857_1010793222	3300005577	Corn Rhizosphere	IDTWVVLAGGATVSTGYEVKEGQRVPGTGVSVVTKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD*
Ga0068854_1020670951	3300005578	Corn Rhizosphere	TPSTELHGQTIDTWVVLAGGATVNTGFEMKDGERVPNTGVSVATKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0068854_1022017332	3300005578	Corn Rhizosphere	IDTWYMLAGGATVNTGYEVKDGQRVPNTGVSVVSKPGDVFFHPSAFYHGFSTVDPDIFWLNIRWDDNYAPAAAK*
Ga0068859_1018241561	3300005617	Switchgrass Rhizosphere	VELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD*
Ga0068861_1013548032	3300005719	Switchgrass Rhizosphere	GRYNVNLRWNGTPTVELHGQTIDTWYMLAGGATVNTGYEVKDGARVPGTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAKN*
Ga0068861_1022070022	3300005719	Switchgrass Rhizosphere	EGGRYNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD*
Ga0068870_100650902	3300005840	Miscanthus Rhizosphere	IEGGRYNVNLRWNGNPTVELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0068870_104828172	3300005840	Miscanthus Rhizosphere	NGTPSVEVHEQTIDTWVVLAGGATVNTGYDVKDGERVPNTGVSIVTTPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYTKN*
Ga0068863_1002600662	3300005841	Switchgrass Rhizosphere	LIEGGRYNVNLRWNGNPTVELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0068862_1026433381	3300005844	Switchgrass Rhizosphere	RLIEGGRYNVNLRWNGTPSTELHGQTIDTWVVLAGGATVNTGFEMKDGERVPNTGASVVTKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK*
Ga0075421_1013699062	3300006845	Populus Rhizosphere	ELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAKP*
Ga0075431_1010756582	3300006847	Populus Rhizosphere	DTWVVLAGGATVITGYDVKDGERVPNTGVSAVTKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAKN*
Ga0075433_107760151	3300006852	Populus Rhizosphere	PTVELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0075429_1009479352	3300006880	Populus Rhizosphere	WNGTPSTELHGQTIDTWVVLAGGATVNTGFEMKDGERVPNTGVSVVTRPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK*
Ga0068865_1003158841	3300006881	Miscanthus Rhizosphere	DTWYMLAGGATVNTGYDVKDGQRVPGTGVSVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWDDNYAKQ*
Ga0079219_109933132	3300006954	Agricultural Soil	GRYNVNLRWNGTPSVEVHEQTIDTWYVLAGGATVNTGYQVKDGERVPNTGVSVATRPGDVFFHPSNFYHGFSEVTHDIFWLNIRWDDNYAK*
Ga0105250_105226781	3300009092	Switchgrass Rhizosphere	GTPSVELHGQTIDTWYMMAGGATVNTGYDVKDGARVPGTGVSVVSKPGDVFFHPSNFYHGFSEVNPDIFWLNIRWDDNYAKQ*
Ga0111539_118623561	3300009094	Populus Rhizosphere	GGRYNVNLRWNGNPTVELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0111539_124997362	3300009094	Populus Rhizosphere	VNLRWNGNPTVELHEQTMDTWYMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSAVTPNVFGLYIRWDDNYAK*
Ga0105245_110790692	3300009098	Miscanthus Rhizosphere	HEQTIDTWVMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYTK*
Ga0114129_115213731	3300009147	Populus Rhizosphere	LRWNGTPSVELHEQTIDTWVVLAGGATVNTGYQVKDGERVPNTGVAVATKPGDVFFHPSNFYHGFSEVTPDVFWLNIRWDDNYGAPRGAP*
Ga0111538_115770811	3300009156	Populus Rhizosphere	TIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVATKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKE*
Ga0111538_118327901	3300009156	Populus Rhizosphere	QTIDTWYLLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD*
Ga0105248_129142411	3300009177	Switchgrass Rhizosphere	TWYMLAGGATVNTGYEVKDGQRVPNTGVSVVSKPGDVFFHPSAFYHGFSTVDPDIFWLNIRWDDNYPAPAK*
Ga0126382_101025723	3300010047	Tropical Forest Soil	WYVLAGGATVNTGYQVKDGARVPNTGVSVVTKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0134128_131720711	3300010373	Terrestrial Soil	QTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0134127_115664981	3300010399	Terrestrial Soil	ELHEQTIDTWVVLAGGATVSTGYEVKEGQRVAGTGVAVVTKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0137424_10878341	3300011412	Soil	RLIEGGRYNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0137423_11746742	3300011430	Soil	VERHEQTIDTWYTLAGGATVNTGFDVKDGQRVPNTGMSAPAKPGDIFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0137451_11323901	3300011438	Soil	RYNVNLRWNGTPTSEVHEQTIDTWYVLAGGATVNTGFERKDNQRVPNTGVAVPAKPGDVFFHPSNFSHGFSGTTPDIFWLNIRWDDNYKQN*
Ga0137427_100746211	3300011445	Soil	PTSEVHEQTIDTWYVLAGGATVNTGFERKDDQRVPNTGVSVPAKPGDVFFHPSNFSHGFSETTPDIFWLNIRWDDNYKQN*
Ga0157334_10296951	3300012509	Soil	WNGTPTVELHEQTIDTWVMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYTK*
Ga0157354_10076621	3300012517	Unplanted Soil	RYNVNLRWNGTPTVELHEQTIDTWVMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYTK*
Ga0157309_100541272	3300012895	Soil	ELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD*
Ga0157289_102746701	3300012903	Soil	YNVNLRWNGTPSTELHGQTIDTWVMLAGGATVNTGFEMKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0157286_103643212	3300012908	Soil	IDTWVMLAGGATVNTGFEMKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0157308_104683631	3300012910	Soil	LRWNGNPTVELHEQTIDTWVVLAGGATVNTGYEVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK*
Ga0157375_104679332	3300013308	Miscanthus Rhizosphere	TRLVEGGRYNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDSYAK*
Ga0157375_110092521	3300013308	Miscanthus Rhizosphere	RYNVNLRWNGTPSVEVHEQTIDTWVVLAGGATVNTGYDVKDGERVPNTGVSIVTKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYTKN*
Ga0157380_124617631	3300014326	Switchgrass Rhizosphere	VELHEQTIDTWVVLAGGATVSTGYEVKEGQRVPGTGVSVATKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK*
Ga0157377_105670632	3300014745	Miscanthus Rhizosphere	WVVLAGGATVNTGFEMKDGERVPNTGVSVVAKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYTKN*
Ga0173483_101037981	3300015077	Soil	TPSVELHEQTIDTWYMLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYTKE*
Ga0163161_116184211	3300017792	Switchgrass Rhizosphere	TWYMLAGGATVNTGYEVKDGARVPGTGVAVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAKN
Ga0190266_111175402	3300017965	Soil	EQTIDTWYVLAGGATVNTGFEMKDGQRVPNTGVSLVSKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK
Ga0184611_13037921	3300018067	Groundwater Sediment	GGRYNVNLRWNGNPTVELHGQTIDTWYMLAGGATVNTGYEVKDGARVPNTGVSVATKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYGK
Ga0190270_123389911	3300018469	Soil	TPSVELHEQTIDTWYMLAGGATVNTGYEVKDGVRVPNTGVSVVSKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAKE
Ga0190274_133495231	3300018476	Soil	NVDLRWNGTASVGLHGQTIDTWYVLAGGATVNTGYEVKDGERVPNTGVAVATKPGDVFFHPSAFYHGFSTVDPDIFWLNIRWDDNYAAK
Ga0190274_134316981	3300018476	Soil	NTRLIEGGRYNVNLRWNGTPSTELHGQTIDTWVMLAGGATVNTGFEMKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0190274_137625752	3300018476	Soil	WNGTPSVEVHDKTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAAK
Ga0190271_128804362	3300018481	Soil	GGRYNVNLRWNGTPTAEVHEQTIDTWYMLAGGATVNTGFERKDGQRVPNTGVSVATKPGDVFFHPSNFSHGFSETTPDIFWLNIRWDDNYKAN
Ga0173479_103025331	3300019362	Soil	NGTPSTELHGQTIDTWVMLAGGATVNTGFEMKHGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0173479_103386752	3300019362	Soil	TWYMLAGGATVNTGYDVKDGQRVPGTGVAVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWDDNYKKD
Ga0190264_107222352	3300019377	Soil	VNLRWNGTPSVERHEQTIDTWYVLAGGATVSTGYQVKEGERVPNTGVSVVTKPGDVFFHPSNFYHGFSQVTPDIFWLNIRWDDNYAAK
Ga0247769_11169221	3300022904	Plant Litter	LVEGGRYNVNLRWNGTPSVEVHDKTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVTKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKE
Ga0247762_10998782	3300023169	Plant Litter	YNINLRWNGTPSMEIHDQTIDTWFLLAGKATVNTGNQVVDGKRVANTGVFNPAKPGDVFFIPSNFHHGYSEVSPDVFWLNIRWDDNYKKD
Ga0207682_100840801	3300025893	Miscanthus Rhizosphere	DTWYVLAGGATVNTGYQVKDGARVPNTGVSVVTKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKE
Ga0207682_101529322	3300025893	Miscanthus Rhizosphere	NGTPSAEVHDKTIDTWYVLAGGATVNTGYEVKDGTRVPNTGVSVATKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYGK
Ga0207710_107427982	3300025900	Switchgrass Rhizosphere	RYNVNLRWNGNPTVELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0207688_101926232	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	TIDTWYMLAGGATVNTGYEVKDGARVPGTGVSVVSKPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYAKN
Ga0207647_104002122	3300025904	Corn Rhizosphere	IDTWVMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYTK
Ga0207646_117470022	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GGRYNVNLRWNGTPSVEIHDQTIDTWYMLAGGATVNTGYDVKDGARVPGTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0207681_107174022	3300025923	Switchgrass Rhizosphere	VNLRWNGTPSVEMHDQTIDTWYMLAGGATVNTGYDVKDGQRVPNTGVSVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWDDNYAKN
Ga0207659_101569761	3300025926	Miscanthus Rhizosphere	VNLRWNGTPSVEVHEQTIDTWVVLAGGATVNTGYDVKDGERVPNTGVSIVTKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYTKN
Ga0207701_104952161	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	HEQTIDTWYMLAGGATVNTGYQVKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0207701_107319512	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RLVEGGRYNVNLRWNGTPSVEVHDQTIDTWYMLAGGATVNTGYDVKDGQRVPNTGVSVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0207701_114837701	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	NTRLVEGGRYNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD
Ga0207706_104956421	3300025933	Corn Rhizosphere	EGGRYNVNLRWNGTPSVEVHDQTIDTWYMLAGGATVNTGYDVKDGQRVPGTGVSVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWDDNYAKQ
Ga0207709_100313691	3300025935	Miscanthus Rhizosphere	GRYNVNLRWNGTPSVEVHEQTIDTWYMLAGGATVNTGYQVKDGQRVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0207691_111061271	3300025940	Miscanthus Rhizosphere	NINLRWNGTPSVELHEQTIDTWYMLAGGATVNTGYQVKDGERVANTGVSVPTRPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYKKD
Ga0207689_106427742	3300025942	Miscanthus Rhizosphere	HDQTIDTWYMLAGGATVNTGYQVKDGQRVANTGVSVVSKPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYAKN
Ga0207689_108016611	3300025942	Miscanthus Rhizosphere	TIDTWVVLAGGATVNTGYEVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK
Ga0207651_100809712	3300025960	Switchgrass Rhizosphere	PSVEVHEQTIDTWVVLAGGATVNTGYDVKDGERVPNTGVSIVTKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYTKN
Ga0207668_116816042	3300025972	Switchgrass Rhizosphere	TPTVELHEQTIDTWYVLAGGATVNTGYQVKDGERLPNTGVSVATKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAAK
Ga0207658_101634252	3300025986	Switchgrass Rhizosphere	DTWVMLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYTK
Ga0207641_110721041	3300026088	Switchgrass Rhizosphere	VNLRWNGTPTVELHGQTIDTWYMLAGGATVNTGYEVKDGARVPGTGVSVVSKPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYAKN
Ga0207641_115225082	3300026088	Switchgrass Rhizosphere	MHDQTIDTWYMLAGGATVNTGYDVKDGQRVPNTGVSVVSKPGDVFFHPSHFYHGFSEVTPDIFWLNIRWD
Ga0207674_107062142	3300026116	Corn Rhizosphere	NLRWNGTPSVEMHDQTVDTWYMLAGGATVNTGYNVKDGARVPNTGVSVVSKPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYKKD
Ga0268264_117550542	3300028381	Switchgrass Rhizosphere	HEQTIDTWVVLAGGATVNTGYQVKDGQRVPDTGVSLATKPGDVFFHPSNFYHGFSQVTPDIFWLNIRWDDNYAK
Ga0310887_100162133	3300031547	Soil	LHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0307408_1005646681	3300031548	Rhizosphere	PSVETHEQTIDTWYVLAGGATVNTGYQVKDGQRVPNTGVSVDTKPGDVFFHPSNFYHGFSAVTPDIFWLNIRWDDNYAAK
Ga0310886_105065762	3300031562	Soil	WNGTPSVEVHEQTIDTWVVLAGGATVNTGYDVKDGERVPNTGVSVVTKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYTKN
Ga0310907_104427811	3300031847	Soil	NTRLIEGGRYNVNLRWNGTPSVELHEQTIDTWVVLAGGATVSTGYEVKEGQRVPGTGVSVATKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKVN
Ga0310892_109965031	3300031858	Soil	EGGRYNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD
Ga0310900_104423101	3300031908	Soil	RLIEGGRYNVNLRWNGTPTVELHEQTIDTWYVLAGGATVNTGYQVKDGERLPNTGVSVATKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAAK
Ga0310901_105383742	3300031940	Soil	GGRYNVNLRWNGTPSTELHGQTIDTWVVLAGGATVNTGFEMKDGGRVPNTGVSVATKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK
Ga0310903_101701612	3300032000	Soil	RWNGTPTVELHGQTIDTWVVLAGGATVNTGYDVKDGERMPNTGVSVVTKPGDVFFHPSAFYHGFSQVSPDIFWLNIRWDDNYAKN
Ga0307416_1037268331	3300032002	Rhizosphere	IEGGRYNVNLRWNGTPSVELHGQTIDTWVVLAGGATVNTGYDVKDGQRVPNTGVSVVTKPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYAAK
Ga0307411_110775852	3300032005	Rhizosphere	LVEGGRYNINLRWNGTPSVELHGQTIDTWVVLAGGATVNTGYDVKDGQRVPNTGVSVATKPGDVFFHPSAFYHGFSEVTPDIFWLNIRWDDNYAAK
Ga0310899_102715362	3300032017	Soil	NLRWNGNPTVELHEQTIDTWYVLAGGATVNTGYQVKDGARVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0310889_100527621	3300032179	Soil	YNVNLRWNGTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSEVTPDIFWLNIRWDDNYKKD
Ga0310811_103959402	3300033475	Soil	VNLRWNGNPTVELHEQTIDTWVVLAGGATVNTGYEVKDGERVPNTGVSVVSKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYAK
Ga0364935_0242457_358_585	3300034151	Sediment	KHEQTIDTWYTLAGGATVNTGFDVKDGQRVPNTGMSAPAKPGDIFFHPSNFYHGFSEVTPDIFWLNIRWDDNYAK
Ga0314782_204339_1_249	3300034661	Soil	GTPTVELHEQTIDTWYLLAGGATVNTGYQVKDGERVPNTGVSVVTKPGDVFFHPSNFYHGFSQVSPDIFWLNIRWDDNYKKD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079743

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences