Metagenome Family F079728

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079728
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	86 residues
Representative Sequence	ITPRFPRPPLWIAVGVVALLWRRPRGWPTIVVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA
Number of Associated Samples	99
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.91 %
% of genes near scaffold ends (potentially truncated)	86.96 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.957 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.522 % of family members)
Environment Ontology (ENVO)	Unclassified (39.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.304 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.82% β-sheet: 0.00% Coil/Unstructured: 48.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13231	PMT_2	42.61
PF00535	Glycos_transf_2	7.83
PF01061	ABC2_membrane	4.35
PF02709	Glyco_transf_7C	3.48
PF14524	Wzt_C	0.87
PF06841	Phage_T4_gp19	0.87
PF13489	Methyltransf_23	0.87
PF13704	Glyco_tranf_2_4	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.70 %
Unclassified	root	N/A	13.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	67.83 %
Unclassified	root	N/A	13.04 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.74 %
Unclassified	root	N/A	13.04 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	61.74 %
Unclassified	root	N/A	13.04 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.74 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.74 %
Unclassified	root	N/A	13.04 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.74 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.74 %
Unclassified	root	N/A	13.04 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.74 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	61.74 %
Unclassified	root	N/A	13.04 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.74 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908008\|FWIREl_GJ4R3DH02HD9TA	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
2228664021\|ICCgaii200_c0929744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
2228664021\|ICCgaii200_c0934230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300000953\|JGI11615J12901_10510985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300004114\|Ga0062593_100083397	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300004479\|Ga0062595_101505354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300004480\|Ga0062592_101239609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300005162\|Ga0066814_10034610	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005329\|Ga0070683_100149465	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300005329\|Ga0070683_100284294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1574	Open in IMG/M
3300005337\|Ga0070682_100788563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	771	Open in IMG/M
3300005354\|Ga0070675_100032967	All Organisms → cellular organisms → Bacteria	4196	Open in IMG/M
3300005356\|Ga0070674_101790127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300005365\|Ga0070688_100946717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300005441\|Ga0070700_100835693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300005457\|Ga0070662_100702614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	856	Open in IMG/M
3300005466\|Ga0070685_11160531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300005468\|Ga0070707_101492065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300005518\|Ga0070699_102115934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300005539\|Ga0068853_102255177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300005547\|Ga0070693_101494709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300005564\|Ga0070664_100393302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1267	Open in IMG/M
3300005564\|Ga0070664_101567467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	624	Open in IMG/M
3300006058\|Ga0075432_10066633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1289	Open in IMG/M
3300006852\|Ga0075433_11216323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300009100\|Ga0075418_11250663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300009162\|Ga0075423_10932712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300009162\|Ga0075423_11139001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300009177\|Ga0105248_11474919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300009545\|Ga0105237_12721175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300009551\|Ga0105238_12368947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300009792\|Ga0126374_11595815	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012093\|Ga0136632_10507526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300012483\|Ga0157337_1038742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300012681\|Ga0136613_10097869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1680	Open in IMG/M
3300012681\|Ga0136613_10605741	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012681\|Ga0136613_10620686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300012684\|Ga0136614_10757488	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012684\|Ga0136614_11230378	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012897\|Ga0157285_10188109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300012900\|Ga0157292_10171707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300012943\|Ga0164241_11447170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012951\|Ga0164300_11132691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300012985\|Ga0164308_10481958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300013100\|Ga0157373_11239231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300013297\|Ga0157378_12359443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300013307\|Ga0157372_10578114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1309	Open in IMG/M
3300013307\|Ga0157372_12945422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300013308\|Ga0157375_10865327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300013308\|Ga0157375_11382295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300014267\|Ga0075313_1152053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300014325\|Ga0163163_13079680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300014745\|Ga0157377_10529501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	829	Open in IMG/M
3300014745\|Ga0157377_10695911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300014969\|Ga0157376_13126808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300015371\|Ga0132258_10437993	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300015371\|Ga0132258_11011778	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300017787\|Ga0183260_10905297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300017789\|Ga0136617_11474953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	507	Open in IMG/M
3300017965\|Ga0190266_10556826	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300018432\|Ga0190275_10671849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1090	Open in IMG/M
3300018469\|Ga0190270_10635929	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300019361\|Ga0173482_10338612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300019487\|Ga0187893_10930448	Not Available	517	Open in IMG/M
3300019884\|Ga0193741_1096429	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300020003\|Ga0193739_1046970	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300025901\|Ga0207688_10110670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1594	Open in IMG/M
3300025903\|Ga0207680_11150739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300025909\|Ga0207705_11542038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300025917\|Ga0207660_10073468	All Organisms → cellular organisms → Bacteria	2493	Open in IMG/M
3300025926\|Ga0207659_10751912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	836	Open in IMG/M
3300025933\|Ga0207706_10803937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300025935\|Ga0207709_10731079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300025935\|Ga0207709_11353789	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300025936\|Ga0207670_11501350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300026023\|Ga0207677_10248715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1443	Open in IMG/M
3300026035\|Ga0207703_11052267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300026041\|Ga0207639_10548964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300026075\|Ga0207708_11266474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300026111\|Ga0208291_1057147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300026116\|Ga0207674_10640553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300026118\|Ga0207675_100861603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300026142\|Ga0207698_11108947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300026933\|Ga0207578_1010407	Not Available	672	Open in IMG/M
3300027650\|Ga0256866_1225647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
(restricted) 3300027799\|Ga0233416_10006976	All Organisms → cellular organisms → Bacteria → Proteobacteria	3649	Open in IMG/M
3300027909\|Ga0209382_10045520	All Organisms → cellular organisms → Bacteria	5243	Open in IMG/M
3300028596\|Ga0247821_11155570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300028596\|Ga0247821_11253577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300028710\|Ga0307322_10213752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300028768\|Ga0307280_10374912	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300028782\|Ga0307306_10202122	Not Available	569	Open in IMG/M
3300028784\|Ga0307282_10435847	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300030006\|Ga0299907_11208168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300030336\|Ga0247826_10267531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1209	Open in IMG/M
3300030336\|Ga0247826_10891421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300031576\|Ga0247727_10480326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	973	Open in IMG/M
3300031847\|Ga0310907_10740797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300031873\|Ga0315297_10838581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300032013\|Ga0310906_10497238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300032401\|Ga0315275_10497444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1366	Open in IMG/M
3300033412\|Ga0310810_10723720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300033550\|Ga0247829_11220534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.74%
Host-Associated	Host-Associated	38.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.43%
Plants	Host-Associated → Plants	38.26%
Aquatic	Environmental → Aquatic	11.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.30%
Freshwater	Environmental → Aquatic → Freshwater	9.57%
Marine	Environmental → Aquatic → Marine	1.74%
Cave	Environmental → Terrestrial → Cave	1.74%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.39%
Loam	Environmental → Terrestrial → Soil → Loam	10.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.70%
Ice	Environmental → Aquatic → Freshwater → Ice	6.96%
Lake	Environmental → Aquatic → Freshwater → Lake	2.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	6.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.22%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.70%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	6.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.22%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.35%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.48%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.61%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.87%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908008	Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026111	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026933	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027799 (restricted)	Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0_MG	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIREl_08494040	2124908008	Soil	PGLGDGDPRPDHAALPRPPLWIVVGIVALLWRRPRGWATILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSA
ICCgaii200_09297441	2228664021	Soil	EILNRITPRFPRPPLWIAVGAIALVWRRPRGWRAIVVLWSAATAVLLIHASSQGLAPEFSLPLYPLFIVTAL
ICCgaii200_09342301	2228664021	Soil	FPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE
JGI11615J12901_105109851	3300000953	Soil	PPLWLAAGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE*
Ga0062593_1000833971	3300004114	Soil	ELPSRSGQTWVTEILNRITPRFPRPPLWLAVGAIALVWRRPRGWRAIVVLWSAAAAVLLVHAVSQGLAPEFALPLYPLFIVTALGALAGERSAPPSPT*
Ga0062589_1008235702	3300004156	Soil	LWLAVGVVAVLVRRPRGRQTILALWLSAGLVLLVHAVSQGVAPEFALPVYPVFLVTALVALAGERASPRDGSSSGMSAG*
Ga0062595_1015053541	3300004479	Soil	LPSRSGQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGQARRSSA*
Ga0062592_1012396092	3300004480	Soil	WVTGILNRITPRFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE*
Ga0066814_100346101	3300005162	Soil	FPRPPLWIAVGAVGLLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA*
Ga0070683_1001494653	3300005329	Corn Rhizosphere	VGVVALLWRRPRGWATILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSA*
Ga0070683_1002842942	3300005329	Corn Rhizosphere	SRAGKAWVTGILNRITPRFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE*
Ga0070682_1007885631	3300005337	Corn Rhizosphere	FPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLLIHAASQGIAPEFALPLYPLFIVTALAALAGDREPARLSSG*
Ga0070661_1004642312	3300005344	Corn Rhizosphere	TPRFPRPPLWLAVGAVALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALGGERGGPASRACVDSTQGSSA*
Ga0070675_1000329675	3300005354	Miscanthus Rhizosphere	WVTEILNRITPRFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS*
Ga0070674_1017901272	3300005356	Miscanthus Rhizosphere	TEILNRITPRLPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS*
Ga0070688_1009467172	3300005365	Switchgrass Rhizosphere	GQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLLIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSA*
Ga0070700_1008356931	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VVALLWRRPRGWPTILVLWGAAAAVLLIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSG*
Ga0070662_1007026142	3300005457	Corn Rhizosphere	RFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE*
Ga0070685_111605311	3300005466	Switchgrass Rhizosphere	GRQWVTEILDRITPRFPRPPLWIAAGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA*
Ga0070707_1014920651	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FPRPPLWIAVGVVALLWRRPRGWATILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSAWCVPPR*
Ga0070699_1021159342	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RFPRPPLWIAVGVVALLWRRPRGWPTIVVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA*
Ga0068853_1022551772	3300005539	Corn Rhizosphere	ILNRITPRFPRPPLWLAVGVIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALGGERGGPASRACVDSTQGSSA*
Ga0070693_1014947092	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LNRITPRFPRPPLWLAVGVIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALGGERGGPRHDSPSAA*
Ga0070664_1003933022	3300005564	Corn Rhizosphere	RFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS*
Ga0070664_1015674672	3300005564	Corn Rhizosphere	RFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSAE*
Ga0068857_1007996261	3300005577	Corn Rhizosphere	RPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS*
Ga0075432_100666332	3300006058	Populus Rhizosphere	RPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA*
Ga0075433_112163231	3300006852	Populus Rhizosphere	TEILDRITPRFPRPPLWIAVGVVALLWRRPRGWPTIVVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA*
Ga0075418_112506632	3300009100	Populus Rhizosphere	RAWDAELPSRKGVSFVPELLNRITPRFPTPILWIVVGLVALVVRRPRGSRTILVLWGSAFLVLLIHAASQGVAPEFALPLYPVFIVTAL*
Ga0075423_109327122	3300009162	Populus Rhizosphere	GLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE*
Ga0075423_111390012	3300009162	Populus Rhizosphere	DAELPSRSGQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWPTIVVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA*
Ga0105248_114749191	3300009177	Switchgrass Rhizosphere	RFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIDAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA*
Ga0105237_127211751	3300009545	Corn Rhizosphere	RSGQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWATILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA*
Ga0105238_123689471	3300009551	Corn Rhizosphere	QNWVTEILNRITPRFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS*
Ga0126374_115958152	3300009792	Tropical Forest Soil	GVAFVPEVLNRITPRFPRPPLWLAVGLVALIVRRPAGWRTILVLWVGSFLVLLIHAASQGVAPEFALPLYPVFIVTALGALAGDRTPAGSLASAR*
Ga0136632_105075261	3300012093	Polar Desert Sand	SREGVDIVTELLNRVTPRFPRPPFWLALGLVGLVLRRPRDWRLIVALWISAGFVLLVHAASQGVTPEFALPLYPVFIVTALGALAGEPHRATENLALDSSRVV*
Ga0157337_10387422	3300012483	Arabidopsis Rhizosphere	WIAVGVVALVWRRPRGWQTILVLWAAAAAVLLIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSG*
Ga0136613_100978692	3300012681	Polar Desert Sand	PRFPRPPFWLALGLIGLVVRRPRDWRTIVVLWVAAGLVLLIHAASQGVAPEFALPLYPVFIVAALGALAGARTRAAHD*
Ga0136613_106057411	3300012681	Polar Desert Sand	RVTPRYPRPPFWLALGLVGLVFRRPRGWRTILALWASAALVLLIHAASQGVAPEFALPLYPVFIVTALGAIAGESRLHAQRSVLGAG*
Ga0136613_106206861	3300012681	Polar Desert Sand	REGVDVVTEVLNRVTPRFPRPPFWLALGLIGLVFRRPRDWRIIVALWICAALVLLIHAASQGVAPEFALPLYPVFIVTALGALGGARIPRAKSPTE*
Ga0136614_107574881	3300012684	Polar Desert Sand	FPRPPFWLALGLVGLVFRRPRGWRTIVTLWACAALVLLIHAASQGVAPEFALPLYPVFIVTALGAIAGESRARTHRSVLGPG*
Ga0136614_112303781	3300012684	Polar Desert Sand	LAVGAIALLWRRPRGSRTIVVLWAASAAVLLIHAGSQGVAPEFALPLYPVFIVTALGAVGGERQARKGRHLTRGSSGRGARSRRPRR*
Ga0157285_101881092	3300012897	Soil	FPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLLIHAASQGIAPEFALPLYPLFIVTALAALAGDRGPARLSSG*
Ga0157292_101717071	3300012900	Soil	PRPPLWIAVSVVALLWRRPRGWPTILVLWGAAAAVLLIHAASQGVAPEFALPLYPLFIVTALAALAGDREPARLSSG*
Ga0157306_103544982	3300012912	Soil	AVLVRRPRGRQTILALWLSAGLVLLVHAVSQGVAPEFALPVYPVFLVTALVALAGERASPRDGSSSGMSAG*
Ga0164241_114471701	3300012943	Soil	GKSWVTGILNRITPRFPRPPLWLAVGVIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALGGERGGSPPAT*
Ga0164300_111326911	3300012951	Soil	QQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALGALAGDRSRGASVRDEM*
Ga0164308_104819582	3300012985	Soil	ILDRITPRFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA*
Ga0157373_112392312	3300013100	Corn Rhizosphere	WIAVGVVALLWRRPRGWPTIVVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA*
Ga0157378_123594432	3300013297	Miscanthus Rhizosphere	AGILNRITPRFPRPPLWLAVGAVALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEVSLPLYPLFIVTALGALGGERGGPASRACVDSTQGSSA*
Ga0157372_105781142	3300013307	Corn Rhizosphere	WVTEILDRITPRFPRPPLWIAVGVVALLWRRPGGWQTIFVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRSPARRSSA*
Ga0157372_129454222	3300013307	Corn Rhizosphere	AVGVVALLWRRPRGWQTILVLCGAAAAVLLIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSA*
Ga0157375_108653271	3300013308	Miscanthus Rhizosphere	RTGQNWVTEILNRITPRFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS*
Ga0157375_113822951	3300013308	Miscanthus Rhizosphere	GVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPTGISSR*
Ga0075313_11520531	3300014267	Natural And Restored Wetlands	RITPRFPTPVLWLAVGMVALVWRRPRGWRTILLLWLAAFLVLLIHAASQGVAPEFALPVYPVFIVTALCALAGDRGGQPGRQLASAG*
Ga0075326_10416121	3300014271	Natural And Restored Wetlands	RITPRFPRPPLWLAVGIVALVVRRPRGRQTILALWLSAGLVLLVHAVSQGVAPEFALPVYPVFLVTALVALAGERASPKDGSPSGMSAG*
Ga0163163_130796802	3300014325	Switchgrass Rhizosphere	PSRSGQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLLIHAASQGIAPEFALPLYPLFIVTALAALAGDREPARLSSG*
Ga0157377_105295013	3300014745	Miscanthus Rhizosphere	GILNRITPRFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE*
Ga0157377_106959112	3300014745	Miscanthus Rhizosphere	LPSRSGQQWVTEILDRITPRFPRPPLWIAVGVVALIWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA*
Ga0157376_131268082	3300014969	Miscanthus Rhizosphere	VGVIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALGGERGGPRHDSPSAA*
Ga0132258_104379934	3300015371	Arabidopsis Rhizosphere	VGAVALVWRRPRGWQTILVLWAAAAAVLLIHAASQGIAPEFALPLYPVFIVTALAALAGDRGPTRISAR*
Ga0132258_110117783	3300015371	Arabidopsis Rhizosphere	TEILDRITPRFPRPPLWIAVGVVALVWRRPREWRTILVLWSAAAAVLLIHAASQGVAPEFALPLYPLFIVTALGALAGERSTGVVARKDT*
Ga0183260_109052972	3300017787	Polar Desert Sand	WDADLPARSGVDIVTELLNRITPRFPRPPFWLALGAIGLVVRRPRDWRLIVVLWVAAGLVLLIHAASQGVAPEFALPLYPVFILTALGALGGERVRPAHE
Ga0136617_114749532	3300017789	Polar Desert Sand	PRPPFWLALGLVGLVLRRPRDWRLIVALWIAAGLVLLIHAASQGVTPEFALPLYPVFIVTALGALAGERRVRRESASL
Ga0190266_105568261	3300017965	Soil	LPSREGANVVPELLNRITPRYPTPVLWLAVGVVGLLWRRPRGWRTIVLLWVAAFLVLLIHAASQGVAPEFALPVYPVFIVTALCALAGDRGGQPGRQLASSG
Ga0190275_106718491	3300018432	Soil	LWLAVGVVALAWRRPRGWRTIVVLWAAAAAVLLVHAVSQGVAPEFALPLYPLFIVTALGALAGERDTRRTAAR
Ga0190270_106359291	3300018469	Soil	TREGSSFVPEILNRITPRYPTPVLWLVVGAVALVWRRPRGWPTIVLLWVAAFLVLLIHAASQGVAPEFALPVYPVFIVTVLCALAGERGPRTQLASTE
Ga0173482_103386121	3300019361	Soil	LNRITPRFPRPPLWLAVGAVALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALGGERGGPASRACVDSTQGSSA
Ga0187893_109304482	3300019487	Microbial Mat On Rocks	MKTGPQTPWMLLVGAVALVARRPRDWRTILLLWTAGFLVLVIHAASQGVAPEFALPVYPLFIVGALGAVAGDRGPRPQLASTA
Ga0193741_10964291	3300019884	Soil	ILNRVTPRFPTPPLWLAVGVVALVVRRPRDWPTILLLWTAAFLVLLVHAASQGVAPEFALPLYPIFIVTALGALAGDRKGQPDRQLASTG
Ga0193739_10469701	3300020003	Soil	RFPTPVLWLAVGVVALISRRPRGWRAIVLLWLAAFLVLLVHAASQGVAPEFALPLYPVFIVTALCAVAGERGRERS
Ga0247787_10163401	3300022893	Soil	AVALVVRRPRGTRTVLALWLAAGLVLLVHAVSQGVAPEFALPLYPVFIVTALVAVAGDLPRRGEMSASGMSSR
Ga0210087_10078551	3300025559	Natural And Restored Wetlands	WLAVGIVALVVRRPRGRQTILALWLSSGLVLLVHAVSQGVAPEFALPVYPVFLVTALVALAGERASPKDGSPSGMSAG
Ga0210143_10365841	3300025792	Natural And Restored Wetlands	FPRPPLWLAVGIVALVVRRPRGRQTILALWLSSGLVLLVHAVSQGVAPEFALPVYPVFLVTALVALAGERASPKDGSPSGMSAG
Ga0207688_101106702	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	SRAGKAWVTGILNRITPRFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSAE
Ga0207680_111507391	3300025903	Switchgrass Rhizosphere	PLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA
Ga0207705_115420382	3300025909	Corn Rhizosphere	GVVALLWRRPRGWATILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALASLAGDRGPARRSSA
Ga0207660_100734681	3300025917	Corn Rhizosphere	PPLWIAAGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA
Ga0207659_107519121	3300025926	Miscanthus Rhizosphere	WPTEILNRITPRFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS
Ga0207706_108039372	3300025933	Corn Rhizosphere	GILNRITPRFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE
Ga0207709_107310791	3300025935	Miscanthus Rhizosphere	LDRITPRFPRPPLWIAVGVVALIWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA
Ga0207709_113537891	3300025935	Miscanthus Rhizosphere	DRITPRFPRPPLWIAVGVVALIWRRPRGWQTIVVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA
Ga0207670_115013501	3300025936	Switchgrass Rhizosphere	SRSGQAWVTELLDRITPRFPRPPLWIAVGVVALLWRRPRGWATILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSA
Ga0207677_102487152	3300026023	Miscanthus Rhizosphere	ITPRFPRPPLWIAVGVVALIWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGQVRRSSA
Ga0207703_110522671	3300026035	Switchgrass Rhizosphere	PSRSGQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWPTILVLWGAAAAVLLIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARLSSG
Ga0207639_105489642	3300026041	Corn Rhizosphere	PSRTGQNWVTEILNRITPRFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS
Ga0207708_112664742	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AELPSRAGKAWVTGILNRITPRFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE
Ga0208291_10571472	3300026111	Natural And Restored Wetlands	LLNRVTPRYPRPPLWLAVGAIALVWRRPRGTRTILVLWTAAALVLLVHAVSQGVAPEFALPVYPMFVVTALGALAGERRSPAGVSASGMSAR
Ga0207674_106405531	3300026116	Corn Rhizosphere	GQNWVTEILNRITPRFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS
Ga0207675_1008616032	3300026118	Switchgrass Rhizosphere	LWIAVGAVALVWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGQARRSSA
Ga0207698_111089471	3300026142	Corn Rhizosphere	ILNRITPRFPRPPLWIAVGVVALLWRRPRGWATILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA
Ga0207578_10104072	3300026933	Soil	VSSREKLFAALAAVGLIVGIVALVWRRPRGWQTILVLWGAAAAVLLIHAASQGIAPEFALPLYPLFIVTALAALAGDRGPARLSAG
Ga0256866_12256472	3300027650	Soil	AWDALLPARDGVDLVTEFLNRVTPRFPRPPFWLALGLIGLVVRRPRDWRLIVTLWISAGLVLLIHAASQGVTPEFALPLYPVFIVTALGAIAGARRQQDPPLDSGTVV
(restricted) Ga0233416_100069761	3300027799	Sediment	ITPRFPRPPLWLAVGLVALLVRRPAGWRTIVVLWGGSFLVLLIHAASQGVAPEFALPVYPVFVVTALGAVAGERRPPRPLASSG
Ga0209382_100455201	3300027909	Populus Rhizosphere	PRFPRPPLWLAVGLVALVVRRPARWRIIVVLWAAAFLVLLVHAASQGVAPEFALPLYPIFIVTALGALTGSRGHPA
Ga0268265_120747062	3300028380	Switchgrass Rhizosphere	RPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS
Ga0247821_111555702	3300028596	Soil	ELPSRTGQNWVTEILNRITPRFPRPPLWIAVGAIALLWRRPRGWRAIVVLWSAAAAVLLIHAASQGLAPEFSLPLYPLFIVTALGALAGERAGSSARACVDSTQAASS
Ga0247821_112535771	3300028596	Soil	ELPSRSGQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA
Ga0307322_102137521	3300028710	Soil	EWDAELPSRTGVAFVPEVLNRITPRFPRPPLWLAVGLVALIVRRPAAWRTMVVLWVGAFLVLLVHAASQGVAPEFALPLYPVFIVTALGALAGDRKPAGSLASTG
Ga0307280_103749122	3300028768	Soil	TGVAFVPEILNRITPRFPRPPLWLAAGLVALIVRRTAGWRTIVVLWAGAFLVLLVHAASQGVAPEFALPLYPVFIVTALGALAGERTPPGSLASAG
Ga0307306_102021221	3300028782	Soil	ITPRFPRPPLWLAVGLIAMILRRPAGWRTMVVLWVGAFLVLLVHAASQGVAPEFALPLYPVFIVTALGALAGDRKPAGSLASTG
Ga0307282_104358472	3300028784	Soil	WLAVGLVALVVRRPAGWRTIVVLWAGAFLVLLVHAASQGVAPEFALPLYPVFIVTALGALAGDRKPAGSLASTG
Ga0299907_112081681	3300030006	Soil	SSVPEVLNRITPRFPRPPLWLAVGVVALAVRRPRDWRTIVVLWLAAGLVLLIHAASQGVAPEFALPLYPVFIVTALGALAGERRGARPSAT
Ga0247826_101087321	3300030336	Soil	LWLAVGVVAVLVRRPRGRQTILALWLSAGLVLLVHAVSQGVAPEFALPVYPVFLVTALVALAGERASPRDGSSSGMSAG
Ga0247826_102675311	3300030336	Soil	AELPSRTGQAWSTEILNRITPRFPRPPLWLAVGVVALVWRRPRGWRTIVVLWTAAAAVLLIHAASQGVAPEFALPLYPVFIVTALGALVGVRGTRGAATG
Ga0247826_108914212	3300030336	Soil	VGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRRPARRSSA
Ga0247727_104803261	3300031576	Biofilm	VGLVALVWRRPRGWRTILILWAGAFLVLLIHAASQGVAPEFALPLYPVFIVTALAAVAGDRGPREDLSSAGRSAR
Ga0310907_107407971	3300031847	Soil	FPRPPLWLAVGLVALVWRRPLGWRTIVVLWASAAAVLLIHAVSQGVAPEFALPLYPLFIVTALGALAGDRGTQRPAAG
Ga0315297_108385811	3300031873	Sediment	VAFVPEILNRVTPRFPRPPLWLAVGLVALLWRRPRGWRTIVVLWVGAFLVLLVHAASQGVAPEFALPLYPVFIVTALAALAGDRGPPGPQSSES
Ga0310906_104972382	3300032013	Soil	ITPRFPRPPLWIAVGVVALLWRRPRGWPTIVVLWGAAAAVLGIHAASQGVAPEFALPLYPLFIVTALAALAGDRGPARRSSA
Ga0310890_114882941	3300032075	Soil	RRPRGTRTVLALWLAAGLVLFVHAASQGVAPEFALPLYPVFIVTALVAVAGELPRRGEMSASALSSR
Ga0315275_104974442	3300032401	Sediment	RITPRFPRPPLWLAVGLVALLWRRPRGWRTIVVLWVGAFLVLLVHAASQGVAPEFALPLYPVFIVTALAALAGDRGPPGPQSSES
Ga0310810_107237201	3300033412	Soil	AWDAELPSRAGKAWVTGILNRITPRFPRPPLWLAVGLVALVWRRPRDWRTILVLWGAALAVLLIHAASQGLAPEFALPLYPVFIVTAVGALAGERSPVRSTE
Ga0247829_101462411	3300033550	Soil	ALLVRRPRGRQTILALWLSAGLVLLVHAVSQGVAPEFALPVYPVFLVTALVALAGERASPRDGSSSGMSAG
Ga0247829_112205341	3300033550	Soil	SGQQWVTEILDRITPRFPRPPLWIAVGVVALLWRRPRGWQTILVLWGAAAAVLGIHAASQGIAPEFALPLYPLFILTALAALAGDRGPARHSSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters