Metagenome / Metatranscriptome Family F079690

Basic Information
Family ID	F079690
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	78 residues
Representative Sequence	MTEDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF
Number of Associated Samples	93
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.04 %
% of genes near scaffold ends (potentially truncated)	24.35 %
% of genes from short scaffolds (< 2000 bps)	74.78 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Most Common Taxonomy
Group	Bacteria (61.739 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.174 % of family members)
Environment Ontology (ENVO)	Unclassified (48.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.69% β-sheet: 0.00% Coil/Unstructured: 42.31%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF07992	Pyr_redox_2	9.57
PF05170	AsmA	5.22
PF00563	EAL	2.61
PF14224	DUF4331	2.61
PF04337	DUF480	0.87
PF12872	OST-HTH	0.87
PF14696	Glyoxalase_5	0.87
PF11941	DUF3459	0.87
PF10000	ACT_3	0.87
PF04828	GFA	0.87
PF13640	2OG-FeII_Oxy_3	0.87
PF05638	T6SS_HCP	0.87
PF14534	DUF4440	0.87
PF00797	Acetyltransf_2	0.87
PF01872	RibD_C	0.87
PF13502	AsmA_2	0.87
PF08241	Methyltransf_11	0.87
PF05973	Gp49	0.87
PF08447	PAS_3	0.87
PF01370	Epimerase	0.87
PF02525	Flavodoxin_2	0.87
PF08238	Sel1	0.87
PF00201	UDPGT	0.87
PF00873	ACR_tran	0.87
PF13561	adh_short_C2	0.87
PF07755	DUF1611	0.87
PF05593	RHS_repeat	0.87
PF05239	PRC	0.87
PF00534	Glycos_transf_1	0.87
PF07715	Plug	0.87
PF13439	Glyco_transf_4	0.87
PF00903	Glyoxalase	0.87
PF09364	XFP_N	0.87
PF06296	RelE	0.87
PF07237	DUF1428	0.87
PF00486	Trans_reg_C	0.87
PF07238	PilZ	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	5.22
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.61
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	2.61
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	2.61
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	2.61
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.74
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	0.87
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.87
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.87
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.87
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.87
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.87
COG3367	Uncharacterized conserved protein, NAD-dependent epimerase/dehydratase family	General function prediction only [R]	0.87
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.87
COG3157	Type VI protein secretion system component Hcp (secreted cytotoxin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.87
COG3132	Uncharacterized conserved protein YceH, UPF0502 family	Function unknown [S]	0.87
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.74 %
Unclassified	root	N/A	38.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.74 %
Unclassified	root	N/A	38.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.74 %
Unclassified	root	N/A	38.26 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.70 %
Unclassified	root	N/A	38.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.04 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	7.83 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.87 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	7.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.48 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.87 %
Sterolibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	7.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.48 %
Sterolibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sterolibacterium	0.87 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.87 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.26 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	7.83 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.48 %
Sterolibacterium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sterolibacterium → Sterolibacterium denitrificans	0.87 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.87 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100283444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300003203\|JGI25406J46586_10001293	All Organisms → cellular organisms → Bacteria → Proteobacteria	11776	Open in IMG/M
3300003322\|rootL2_10135353	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300005175\|Ga0066673_10596174	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300005179\|Ga0066684_10491505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	824	Open in IMG/M
3300005238\|Ga0073692_1063879	Not Available	579	Open in IMG/M
3300005260\|Ga0074072_1000269	All Organisms → cellular organisms → Bacteria → Proteobacteria	33928	Open in IMG/M
3300005331\|Ga0070670_100164415	Not Available	1924	Open in IMG/M
3300005332\|Ga0066388_100760219	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1568	Open in IMG/M
3300005332\|Ga0066388_103467013	Not Available	805	Open in IMG/M
3300005335\|Ga0070666_10306014	Not Available	1132	Open in IMG/M
3300005335\|Ga0070666_10489713	Not Available	891	Open in IMG/M
3300005344\|Ga0070661_101363745	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300005355\|Ga0070671_100506584	All Organisms → cellular organisms → Bacteria → Proteobacteria	1039	Open in IMG/M
3300005466\|Ga0070685_11221559	Not Available	572	Open in IMG/M
3300005529\|Ga0070741_10278913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1578	Open in IMG/M
3300005529\|Ga0070741_10302035	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300005534\|Ga0070735_10049426	All Organisms → cellular organisms → Bacteria → Proteobacteria	2791	Open in IMG/M
3300005534\|Ga0070735_10304818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	960	Open in IMG/M
3300005535\|Ga0070684_100297824	Not Available	1480	Open in IMG/M
3300005538\|Ga0070731_10305477	Not Available	1056	Open in IMG/M
3300005539\|Ga0068853_100680390	Not Available	980	Open in IMG/M
3300005541\|Ga0070733_10217422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1252	Open in IMG/M
3300005548\|Ga0070665_100021302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6519	Open in IMG/M
3300005548\|Ga0070665_100026033	All Organisms → cellular organisms → Bacteria → Proteobacteria	5892	Open in IMG/M
3300005548\|Ga0070665_100048315	All Organisms → cellular organisms → Bacteria → Proteobacteria	4273	Open in IMG/M
3300005719\|Ga0068861_101471405	Not Available	667	Open in IMG/M
3300005844\|Ga0068862_100783376	Not Available	930	Open in IMG/M
3300005937\|Ga0081455_10016096	All Organisms → cellular organisms → Bacteria → Proteobacteria	7233	Open in IMG/M
3300005985\|Ga0081539_10354298	Not Available	616	Open in IMG/M
3300006893\|Ga0073928_10308587	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300009093\|Ga0105240_10448825	Not Available	1444	Open in IMG/M
3300009093\|Ga0105240_12517905	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009093\|Ga0105240_12703863	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300009098\|Ga0105245_12503420	Not Available	569	Open in IMG/M
3300009174\|Ga0105241_10277616	All Organisms → cellular organisms → Bacteria → Proteobacteria	1430	Open in IMG/M
3300009545\|Ga0105237_12254900	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009553\|Ga0105249_10004489	All Organisms → cellular organisms → Bacteria → Proteobacteria	12065	Open in IMG/M
3300010371\|Ga0134125_10495479	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300010869\|Ga0126359_1341476	Not Available	645	Open in IMG/M
3300010877\|Ga0126356_10787058	Not Available	500	Open in IMG/M
3300012212\|Ga0150985_110980744	Not Available	502	Open in IMG/M
3300012349\|Ga0137387_10420235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	970	Open in IMG/M
3300012357\|Ga0137384_10914181	All Organisms → cellular organisms → Bacteria → Proteobacteria	707	Open in IMG/M
3300012359\|Ga0137385_10483701	All Organisms → cellular organisms → Bacteria → Proteobacteria	1049	Open in IMG/M
3300012469\|Ga0150984_108138071	Not Available	775	Open in IMG/M
3300012469\|Ga0150984_123064545	Not Available	506	Open in IMG/M
3300012904\|Ga0157282_10069291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	914	Open in IMG/M
3300012924\|Ga0137413_10005930	All Organisms → cellular organisms → Bacteria → Proteobacteria	5619	Open in IMG/M
3300012924\|Ga0137413_10019816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	3516	Open in IMG/M
3300012927\|Ga0137416_10074144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2480	Open in IMG/M
3300012927\|Ga0137416_10803001	Not Available	832	Open in IMG/M
3300012929\|Ga0137404_10339170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1313	Open in IMG/M
3300012929\|Ga0137404_10893210	Not Available	810	Open in IMG/M
3300012964\|Ga0153916_11275727	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300013296\|Ga0157374_11201619	All Organisms → cellular organisms → Bacteria → Proteobacteria	780	Open in IMG/M
3300013306\|Ga0163162_10126161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2665	Open in IMG/M
3300014168\|Ga0181534_10002628	All Organisms → cellular organisms → Bacteria → Proteobacteria	11005	Open in IMG/M
3300014968\|Ga0157379_10282597	All Organisms → cellular organisms → Bacteria → Proteobacteria	1510	Open in IMG/M
3300014968\|Ga0157379_12615434	Not Available	506	Open in IMG/M
3300014969\|Ga0157376_10428115	Not Available	1286	Open in IMG/M
3300015053\|Ga0137405_1405910	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300015242\|Ga0137412_11044213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	582	Open in IMG/M
3300015264\|Ga0137403_10070359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3555	Open in IMG/M
3300018422\|Ga0190265_10473230	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300019270\|Ga0181512_1312652	Not Available	1348	Open in IMG/M
3300021090\|Ga0210377_10067268	All Organisms → cellular organisms → Bacteria → Proteobacteria	2445	Open in IMG/M
3300021168\|Ga0210406_10313448	Not Available	1273	Open in IMG/M
3300022894\|Ga0247778_1016401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1719	Open in IMG/M
3300022897\|Ga0247764_1006826	All Organisms → cellular organisms → Bacteria → Proteobacteria	3826	Open in IMG/M
3300023270\|Ga0247784_1089507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	778	Open in IMG/M
3300025321\|Ga0207656_10254759	Not Available	860	Open in IMG/M
3300025900\|Ga0207710_10102068	Not Available	1354	Open in IMG/M
3300025903\|Ga0207680_10396144	Not Available	975	Open in IMG/M
3300025911\|Ga0207654_10106666	Not Available	1736	Open in IMG/M
3300025913\|Ga0207695_10062547	All Organisms → cellular organisms → Bacteria	3842	Open in IMG/M
3300025913\|Ga0207695_11053341	Not Available	693	Open in IMG/M
3300025961\|Ga0207712_10019861	All Organisms → cellular organisms → Bacteria → Proteobacteria	4392	Open in IMG/M
3300026035\|Ga0207703_10911259	Not Available	842	Open in IMG/M
3300026078\|Ga0207702_11879224	Not Available	590	Open in IMG/M
3300027663\|Ga0208990_1134529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Sterolibacterium → Sterolibacterium denitrificans	663	Open in IMG/M
3300027727\|Ga0209328_10104151	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300027867\|Ga0209167_10166190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1164	Open in IMG/M
3300027986\|Ga0209168_10133414	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300027986\|Ga0209168_10225579	Not Available	932	Open in IMG/M
3300028379\|Ga0268266_10013709	All Organisms → cellular organisms → Bacteria → Proteobacteria	6981	Open in IMG/M
3300028379\|Ga0268266_10088879	All Organisms → cellular organisms → Bacteria	2704	Open in IMG/M
3300028380\|Ga0268265_10523574	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300028380\|Ga0268265_12625757	Not Available	509	Open in IMG/M
3300028381\|Ga0268264_10000183	All Organisms → cellular organisms → Bacteria → Proteobacteria	133803	Open in IMG/M
3300028536\|Ga0137415_10000003	All Organisms → cellular organisms → Bacteria → Proteobacteria	206049	Open in IMG/M
3300028536\|Ga0137415_11127171	Not Available	598	Open in IMG/M
3300028794\|Ga0307515_10472880	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300030521\|Ga0307511_10000028	All Organisms → cellular organisms → Bacteria → Proteobacteria	109328	Open in IMG/M
3300030521\|Ga0307511_10280695	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300030844\|Ga0075377_11642263	All Organisms → cellular organisms → Bacteria → Proteobacteria	825	Open in IMG/M
3300030848\|Ga0075388_11616620	Not Available	642	Open in IMG/M
3300030966\|Ga0075383_10668449	Not Available	689	Open in IMG/M
3300030969\|Ga0075394_10030713	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300030973\|Ga0075395_10564348	Not Available	651	Open in IMG/M
3300031184\|Ga0307499_10233378	Not Available	580	Open in IMG/M
3300031231\|Ga0170824_104943072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1658	Open in IMG/M
3300031231\|Ga0170824_119665579	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300031446\|Ga0170820_10764742	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300031715\|Ga0307476_10001374	All Organisms → cellular organisms → Bacteria	14873	Open in IMG/M
3300031726\|Ga0302321_102360774	Not Available	620	Open in IMG/M
3300031962\|Ga0307479_10999563	Not Available	806	Open in IMG/M
3300031962\|Ga0307479_11209246	Not Available	719	Open in IMG/M
3300032783\|Ga0335079_11933006	Not Available	570	Open in IMG/M
3300032829\|Ga0335070_10038021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5399	Open in IMG/M
3300032954\|Ga0335083_10128567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2433	Open in IMG/M
3300033158\|Ga0335077_12222639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	503	Open in IMG/M
3300033179\|Ga0307507_10307474	Not Available	966	Open in IMG/M
3300033180\|Ga0307510_10000002	All Organisms → cellular organisms → Bacteria → Proteobacteria	801565	Open in IMG/M
3300033180\|Ga0307510_10036411	All Organisms → cellular organisms → Bacteria → Proteobacteria	5475	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.52%
Host-Associated	Host-Associated	43.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.17%
Plants	Host-Associated → Plants	43.48%
Aquatic	Environmental → Aquatic	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.17%
Roots	Host-Associated → Plants → Roots	5.22%
Freshwater	Environmental → Aquatic → Freshwater	3.48%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%
Peat	Environmental → Terrestrial → Peat	0.87%
Rhizome	Host-Associated → Plants → Rhizome	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.30%
Loam	Environmental → Terrestrial → Soil → Loam	6.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	5.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.61%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.43%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	5.22%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.87%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.22%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	5.22%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.74%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005238	Microbial communities on the surface of aged kaolinite enhanced biochar from soil in Sydney, Australia	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022897	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L051-202B-4	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033179	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM	Host-Associated	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002834442	3300002245	Forest Soil	MSDYRDARRARYFLYLLGGVFVALGFSLEMVPAFAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMVLTGWL*
JGI25406J46586_100012931	3300003203	Tabebuia Heterophylla Rhizosphere	MDRQPNPRDADPAARKARYFLYAIGGVFVAIGFSLEMVPSVAAVTPWWSGRACALIGVVFLSIGRFAPDRFVRRCESLLTGWP*
rootL2_101353532	3300003322	Sugarcane Root And Bulk Soil	MVEDPTARRARYFLYLLGGVFVALGFALEMVPAMAAVAPELAGRVSAGIGALILSVGRFGSDRLVRRWETVLTGWF*
Ga0066673_105961741	3300005175	Soil	MAEDPSARRARYFLYLLGGVFVALGFALDRVPAMAAVTPDLAGRVSAGIGALILSVGRFGSDRLVRRCEMLLTGWF*
Ga0066684_104915052	3300005179	Soil	MTQDKAARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGTGALILSAGRFGSDRFVRRCEMLLIGWF*
Ga0073692_10638791	3300005238	Soil	MPDDPTARRARYFLYLLGGVFVALGFALEQVPAMAAVAPDLAGRVSAGIGALILSLGRFGSDRLVRRCEMLFTGWF*
Ga0074072_100026927	3300005260	Soil	MAEDPAARRARYFLYLLGGVFVALGFALERVPAMAAVAPELAGRVSAGIGAVILSVGRFGSDRLVRRWETVLTGWF*
Ga0070670_1001644153	3300005331	Switchgrass Rhizosphere	MTEDPSARRARYFLYLLGAVFVALGFSLEMVPAMAAVAPELAGRACAGIGALILSLGRFGSDRLVRRCETLLTGWF*
Ga0066388_1007602192	3300005332	Tropical Forest Soil	VAQVICDYMSEDKAARRARYFLYLLGGAFVALGFSLEMVPALAEFAPSLAGRVCAGIGGVILSAGRFGSDRFVRRCEMLLTGWM*
Ga0066388_1034670132	3300005332	Tropical Forest Soil	MSEDKAARRARYFLYLLGGAFVALGFSLEMVPALAAVAPALAGRVCAGVGAVILSAGRFGSDRFVRRCETLLTGWI*
Ga0070666_103060142	3300005335	Switchgrass Rhizosphere	MTEDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILALGRFGSDRLVRRCETLLTGWF*
Ga0070666_104897132	3300005335	Switchgrass Rhizosphere	MSEDRNARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMMLTGWL*
Ga0070661_1013637452	3300005344	Corn Rhizosphere	DPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF*
Ga0070671_1005065843	3300005355	Switchgrass Rhizosphere	MTEDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRACAGIGALILSLGRFGSDRLVRRCETLLTGWF*
Ga0070685_112215591	3300005466	Switchgrass Rhizosphere	GTWSWRSVICRRMSEDRNARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMMLTGWL*
Ga0070741_102789132	3300005529	Surface Soil	MDRGPNPRDEDPIARRARYFLYAIGAVFVALGFALEMVPMFAAVTPWYSGRASAAVGVVFLSIGRFGSDRFVRRCEALITGWP*
Ga0070741_103020354	3300005529	Surface Soil	MSEDRLARRARYFLYLLGGAFVALGFSLEMVPALAAIAPSLAGRVCAGIGAVVLSAGRFGSDRFVRRCEMMLTGWSSR*
Ga0070735_100494261	3300005534	Surface Soil	YLLGGAFVALGFSLEMVPALAAVAPALAGRVCAGVGAAILSVGRFGSDRLVCRCEALFRGRYSGRPG*
Ga0070735_103048182	3300005534	Surface Soil	MAGGSAARRARYFIYIVGGIFVALGFSLEMVPAFAAHAPGLAGRVCAGVGALILSIGRFGSDRVVRRCESLFQRR*
Ga0070684_1002978243	3300005535	Corn Rhizosphere	MTEDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF*
Ga0070731_103054771	3300005538	Surface Soil	VPGARAGNLSVRDPRSIICGGMTEDKAARRARYFLYLLGGVFVALGFSLEMVPPLAAIAPSLAGRVCAGIGAVVLSAGRFGSDRFVRRCEMVLTGWR*
Ga0068853_1006803902	3300005539	Corn Rhizosphere	MTEDPPARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF*
Ga0070733_102174223	3300005541	Surface Soil	MTEDRAARRARYTLYLTGGAFVALGYSLEMVPMLAAVAPTLAGRVAAGIGAAILAVGRFGSDRLVLRCESLFRQR*
Ga0070665_1000213026	3300005548	Switchgrass Rhizosphere	MPDEPTARRARYFLYLLGGVFVALGFALEQVPAMAAVAPDLAGRVSAGIGALILALGRFGSDRLVRRCEMLLTGWF*
Ga0070665_1000260333	3300005548	Switchgrass Rhizosphere	MREDRDARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMMLTGWL*
Ga0070665_1000483157	3300005548	Switchgrass Rhizosphere	VQVGGARALESRGMQDPARRARYFLYLLGGVFVALGFALEMVPAMAAVAPELAGRVSAGIGALILSAGRFGSDRFVLRCETLLTGWF*
Ga0068861_1014714052	3300005719	Switchgrass Rhizosphere	MDRDPNPRDVDPIARRARYFLYAIGAVFVALGFALEMVPAFVAVTPWYSGRASAAVGVVFLSIGRFGSDRFVRRCE
Ga0068862_1007833762	3300005844	Switchgrass Rhizosphere	MDAKANPRDADPHARRARYFLYALGGIFVALGFALEMVPNFASATPWWSGRACAFIGVVFLSIGRFASDRIVRRCESLLTGWP*
Ga0081455_100160969	3300005937	Tabebuia Heterophylla Rhizosphere	MDRGPNPRDADPIARHARYFLYAIGAVFVALGFALEMVPMLAAATPWYAGRASAAVGVVFLSMGRFGSDRFVRRCETLLTGWP*
Ga0081539_103542982	3300005985	Tabebuia Heterophylla Rhizosphere	MQAMESRPNPRDADPLARRARYFLYALGGIFVALGFSLEMVPRLAAATPWWSGRACAFIGVVFLSIGRFGSDRIVRRAESLLTGWP*
Ga0073928_103085873	3300006893	Iron-Sulfur Acid Spring	MAEDRAARRARYFLYLLGGVFVALGFSVERVPAVADIAPALAGRICAGIGAVILAAGRFGSDRFVLRCERLLTGWF*
Ga0105240_104488253	3300009093	Corn Rhizosphere	ARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRICAGVGALILSLGRFGSDRLVLRCEVLLTGWF*
Ga0105240_125179052	3300009093	Corn Rhizosphere	NEDTAARRARYFLYLVGGAFVALGFSLEMVPAFAAVAPPLAGRVCAGIGAMVLSAGRFGSDRFVRRCETLLTGWI*
Ga0105240_127038632	3300009093	Corn Rhizosphere	MHDPARRARYFLYLLGGVFVAFGFALETVPAMAAVAPELAGRISAGIGALILSAGRFGSDRFVLRCETLLTGWF*
Ga0105245_125034201	3300009098	Miscanthus Rhizosphere	MHDPARRARYFLYLLGGVFVAFGFALETVPAMAAVAPELAGRISAGIGALILSAGRFGSDRFVLRCETLLTGW
Ga0105241_102776163	3300009174	Corn Rhizosphere	MTEAPTARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGMGALILALGRFGSDRLVRRCELLLTGWF*
Ga0105237_122549002	3300009545	Corn Rhizosphere	MSEDRDARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSRAGRVSAGIGAVILSAGRFGSDRFVRRCEMMLTGWL*
Ga0105249_1000448911	3300009553	Switchgrass Rhizosphere	MTSSANPRDGDPQARRARYFLYALGGIFVALGFALEMVPNLATVTPWWSGRACAFIGLVFLSLGRFASDRIVRRCESLLTGWP*
Ga0134125_104954792	3300010371	Terrestrial Soil	LFPGWPFGILSHVIEDSIARRARYALYLLGSAFVMLGFSLEMVPALAAVAPALAGRICAGIGAAILSVGRFGTDRIVRRCDALIRGRSG*
Ga0126359_13414761	3300010869	Boreal Forest Soil	MTVNAVDNERMNEDRAARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPVLAGRICAGIGAVILSVGRFGPDRFVHRCETLLTGWL*
Ga0126356_107870581	3300010877	Boreal Forest Soil	MTINAVGNERMNEDRVARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPALAGRICAGIGAVILSVGRFGPDRF
Ga0150985_1109807441	3300012212	Avena Fatua Rhizosphere	MTEDPSARRARYFLYLLGGVFVAVGFSLEMVPPMAAIAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF*
Ga0137387_104202351	3300012349	Vadose Zone Soil	MSEDRAARRARYFLYLLGGVFVALGFSLEMVPELAAVSPALAGRVCAGIGAVILSAGRFGSDRFVRRCAMLLTGWF
Ga0137384_109141812	3300012357	Vadose Zone Soil	MSEDRAARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCVGTGAVILGAGRFGSDQFVRRCEMLLTGWF*
Ga0137385_104837011	3300012359	Vadose Zone Soil	RSVICRRMSEDRAARRARYFLYLLGGVFVALGFSLEMVPELAAVSPALAGRVCAGIGAVILSAGRFGSDRFVRRCEMLLTGWF*
Ga0150984_1081380713	3300012469	Avena Fatua Rhizosphere	MTDDPSARRARYFLYLLGGVFVAVGFSLEMVPPMAAIAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLT
Ga0150984_1230645451	3300012469	Avena Fatua Rhizosphere	MTEDTSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF*
Ga0157282_100692911	3300012904	Soil	LSEDAPARRARYFLYLLGGVFVALGFALETVPAMAAVAPELAGRVCAGIGALILGMGRFGSDRFVLRCEMLLTGWF*
Ga0137413_100059305	3300012924	Vadose Zone Soil	VGEGKAARRARYFLYLLGGVFVALGFSLEMVPVMAAVAPPLAGRICAGIGAVILSAGRYGSDRFVLRCETLLTGWF*
Ga0137413_100198164	3300012924	Vadose Zone Soil	MHDDPARRARYFLYLLGGVFVALGFALEMVPAMAAVAPELAGRISAGIGALILAAGRFGSDRFVLRCEMLLTGWF*
Ga0137416_100741442	3300012927	Vadose Zone Soil	LRVGEDKAARRARYFLYLLGGVFVALGFSLEMVPVMAAVAPPLAGRICAGIGAVILSAGRYGSDRFVLRCETVLTGWF*
Ga0137416_108030013	3300012927	Vadose Zone Soil	NEDRAVRRARYFLYLLGGVFVALGFCLEMVPAMADVAPALAGRICAGIGAVILAAGRFGSDRFVLRCEMLLTGWF*
Ga0137404_103391702	3300012929	Vadose Zone Soil	MTEDRAARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGMGAVILSAGRFGSDQFVRRCEMLLTGWF*
Ga0137404_108932102	3300012929	Vadose Zone Soil	MSEDRDARRARYFLYLLGGVFVTLGFSLETVPALAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMLLTGWR*
Ga0153916_112757272	3300012964	Freshwater Wetlands	MSVNHHRMQEIPNRQHDEGRSARRARYFLYALGGAFAALGFALELVPALAAVSPALAGRVCVGIGAGIMAAGRFGSDRFVRRCESLLTGWL*
Ga0157374_112016193	3300013296	Miscanthus Rhizosphere	MTEDPSARRARYFLYLLGAVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILALGRFGSDRLVRRCETLLTGWF*
Ga0163162_101261612	3300013306	Switchgrass Rhizosphere	MSEDRNARRARYFLYLLGGVFVALGFSLEMVPALAAVSQSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMMLT
Ga0181534_100026285	3300014168	Bog	VDDPTARRARYFLYLLGGVFVALGFALESVPAMAAVAPELAGRVSAGLGALILAVGRFGSDRIVRRCEILLTGWF*
Ga0157379_102825971	3300014968	Switchgrass Rhizosphere	MIEDRAARRARYFLYLLGGAFVALGFSLEQVPALAAVSPSLAGRICAGMGALILSAGRFGSDRFVRRCEMLLTGWL*
Ga0157379_126154341	3300014968	Switchgrass Rhizosphere	MSEDQATRRARYFLYLLGGVFVALGFSLEMVPALAAVAPSLAGRVSAGIGAVVLSAGRFGSDRFVRRCEMALTGWL*
Ga0157376_104281152	3300014969	Miscanthus Rhizosphere	MADDPSARRARYFLYLLGGVFVALGFALERVPAMAAVTPDLAGRVSAGIGALILSVGRFGSDRLVRRCEMLLTGWF*
Ga0137405_14059102	3300015053	Vadose Zone Soil	MARSVICRCMTEDRTARRARYFLYLLGGVFVALGFSLEMVPALAAMSPSLAGRVCAGIGAVILSAGRFGSDQFVRRCEILLTGGSSARRRESLW*
Ga0137412_110442131	3300015242	Vadose Zone Soil	MSEDRDARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGIGAVILSMGRFGSDRFVRRCEMLLTGWP*
Ga0137403_100703593	3300015264	Vadose Zone Soil	MARSVICRCMTEDRAARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGMGAVILSAGRFGSDQFVRRCEILLTGWF*
Ga0190265_104732303	3300018422	Soil	VDLSSAAPGDELKAVRRARHVLYGIGIAFVVLGFALELVPALAAVSGPLAGRLCAGIGAVILSVGRFGSDRFVNRCERWLTGWF
Ga0181512_13126521	3300019270	Peatland	VDDPTARRARYFLYLLGGVFVALGFALESVPAMAAVAPELAGRVSAGLGALILAVGRFGSDRIVRRCEILLTGWF
Ga0210377_100672681	3300021090	Groundwater Sediment	MAVSDDASIAEVTSVRRARTLLYGLGIVFVVLGFSLEMVPALAAVVSPLAGKICAGIGALILSVGRFGSDRVVRRCQAPLTGRS
Ga0210406_103134481	3300021168	Soil	MNEDRAVRRARYFLYLLGGVFVALGFSLEMVPAMADVAPALAGRICAGIGAAILAAGRFGSDRFVLRCERLLTRWL
Ga0247778_10164012	3300022894	Plant Litter	VRRARYFLYLLGGVFVALGFALERVPAMAAVAPELAGRVCAGIGALILGMGRFGSDRFVLRCEMLLTGWF
Ga0247764_10068263	3300022897	Plant Litter	LSEDAPARRARYFLYLLGGVFVALGFALETVPAMAAVAPELAGRVCAGVGALILGMGRFGSDRFVLRCEMLLTGWF
Ga0247784_10895072	3300023270	Plant Litter	LSEDAPVRRARYFLYLLGGVFVALGFALERVPAMAAVAPELAGRVCAGIGALILGMGRFGSDRFVLRCEMLLTGWF
Ga0207656_102547593	3300025321	Corn Rhizosphere	EDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF
Ga0207710_101020683	3300025900	Switchgrass Rhizosphere	MTEDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILSLGRFGSDRLVRRCETLLTGWF
Ga0207680_103961443	3300025903	Switchgrass Rhizosphere	MREDRDARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMMLTGWL
Ga0207654_101066663	3300025911	Corn Rhizosphere	PTARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGMGALILALGRFGSDRLVRRCELLLTGWF
Ga0207695_100625473	3300025913	Corn Rhizosphere	MPDEPTARRARYFLYLLGGVFVALGFALEQVPAMAAVAPDLAGRVSAGIGALILALGRFGSDRLVRRCEMLLTGWF
Ga0207695_110533412	3300025913	Corn Rhizosphere	MTEDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRACAGIGALILSLGRFGSDRLVRRCETLLTGWF
Ga0207712_100198612	3300025961	Switchgrass Rhizosphere	MTSSANPRDGDPQARRARYFLYALGGIFVALGFALEMVPNLATVTPWWSGRACAFIGLVFLSLGRFASDRIVRRCESLLTGWP
Ga0207703_109112592	3300026035	Switchgrass Rhizosphere	MDRGPNPHDEDPIARRARYFLYAIGAVFVALGFALEMVPTFAAVTPWYSGRASAAVGVVFLSIGRFGSDRFVRRCEALLTGWP
Ga0207702_118792241	3300026078	Corn Rhizosphere	TEDPSARRARYFLYLLGAVFVALGFSLEMVPAMAAVAPELAGRACAGIGALILSLGRFGSDRLVRRCETLLTGWF
Ga0208990_11345291	3300027663	Forest Soil	VICRCMTEHKDARRARYFLYLLGGVFVALGFSLEMVPAFAAVSPALAGRVCAGIGAVILSAGRFGTDRFVRRCEMVLTGWR
Ga0209328_101041512	3300027727	Forest Soil	MSDYRDARRARYFLYLLGGVFVALGFSLEMVPAFAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMVLTGWL
Ga0209167_101661902	3300027867	Surface Soil	MTEDRAARRARYTLYLTGGAFVALGYSLEMVPMLAAVAPTLAGRVAAGIGAAILAVGRFGSDRLVLRCESLFRQR
Ga0209168_101334141	3300027986	Surface Soil	GLYLLGGAFVALGFSLEMVPALAAVAPALAGRVCAGVGAAILSVGRFGSDRLVCRCEALFRGRYSGRPG
Ga0209168_102255791	3300027986	Surface Soil	MAENPAARRARYFLYLLGGVFVALGFSLEMVPALAAISAPLAGRFCAGIGALILSAGRFGSDGFVLRCESVLT
Ga0268266_100137092	3300028379	Switchgrass Rhizosphere	VQVGGARALESRGMQDPARRARYFLYLLGGVFVALGFALEMVPAMAAVAPELAGRVSAGIGALILSAGRFGSDRFVLRCETLLTGWF
Ga0268266_100888794	3300028379	Switchgrass Rhizosphere	MTEDPSARRARYFLYLLGAVFVALGFSLEMVPAMAAVAPELAGRACAGIGALILSLGRFGSDRLVRRCETLLTGWF
Ga0268265_105235741	3300028380	Switchgrass Rhizosphere	MDAKANPRDADPHARRARYFLYALGGIFVALGFALEMVPNFASATPWWSGRACAFIGVVFLSIGRFASDRIVRRCESLLTGWP
Ga0268265_126257571	3300028380	Switchgrass Rhizosphere	MSEDRNARRARYFLYLLGGVFVALGFSLEMVPALAAVSPSLAGRVCAGIGAVILSAGRFGSDRFVRRCEMMLTG
Ga0268264_10000183108	3300028381	Switchgrass Rhizosphere	MTEDPSARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPELAGRVCAGIGALILALGRFGSDRLVRRCETLLTGWF
Ga0137415_10000003157	3300028536	Vadose Zone Soil	VGEDKAARRARYFLYLLGGVFVALGFSLEMVPVMAAVAPPLAGRICAGIGAVILSAGRYGSDRFVLRCETVLTGWF
Ga0137415_111271711	3300028536	Vadose Zone Soil	MSEDRAARRARYFLYLLGGVFVALGFSLEMVPALAVVSPSLAGRVCAGIGAVILSAGRFGSNR
Ga0307515_104728801	3300028794	Ectomycorrhiza	LETSTKNPSDDARSARRARYFLYLLGAVFVALGFSLEMVPALAAVAPDIAGRVCAGIGTVILAAGRFGSDRLVRRCN
Ga0307511_1000002844	3300030521	Ectomycorrhiza	MIEDRAARRARYFLYLLGGAFVALGFSLELVPALAAVSPSLAGRICAGIGAVILSAGRFGSDRFVRRCEMLLTGWL
Ga0307511_102806951	3300030521	Ectomycorrhiza	EDRAARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPALAGRVCAGIGALILSAGRFGPDRFVLRCETLLTGWL
Ga0075377_116422631	3300030844	Soil	FSFPFSARRARYFLYLLGGVFVALGFALDRVPAMAAVTPDLAGRVSAGIGALILAVGRFGSDRLVRRCEMLLTGWF
Ga0075388_116166202	3300030848	Soil	MTVNAVGNERMNEDRAARRARYFLYLLGGVFVALGFSLEMVPAMAAVAPALAGRICAGIGAVILSVGRFGPDRVVLRCETLLTGWR
Ga0075383_106684492	3300030966	Soil	MTVNAVGDERMNEDRAARRARYFLYLLGGVFVALGFSLEMVPALAAVAPALAGRVCAGTGAVILSAGRFGPDRFVLRCEALLTGWL
Ga0075394_100307132	3300030969	Soil	MAGCACTPPSHMPVDSRRRHVCGCMIEDRAARRARYFLYLLGGVFVALGFSLEMVPGLAAISPALAGRVCAGVGAVILSAGRFGSDRFVRRCEMLLTGWL
Ga0075395_105643481	3300030973	Soil	MIEDRAARRARYFLYLLGGVFVALGFSLEMVPGLAAISPALAGRVCAGVGAVILSAGRFGSDRFVRRCEMLLTGWL
Ga0307499_102333781	3300031184	Soil	VNTDSTDNPANANEARSARRARYFLYVIAGVFVALGFSLEMVPALAAASPWWGGRACAFIGVVFLSIGRYGSDRLVRRCESLLTGWP
Ga0170824_1049430723	3300031231	Forest Soil	MNEDKAVRRARYFLYLLGGVFVALGFSLEIVPAIADVAPALAVRICAGIGAVTLAAGRFGSGRFVLRCETALTGWF
Ga0170824_1196655792	3300031231	Forest Soil	MIEDRAARRARYFLYLLGGVFVALGFSLEMVPALAAVSPLLAGRVCAGVGAVILSVGRFGTDRFVRRCEMLLTGWL
Ga0170820_107647422	3300031446	Forest Soil	AQPMICGCMIEDRAARRARYFLYLLGGVFVALGFSLEMVPALAAVSPLLAGRVCAGVGAVILSVGRFGTDRFVRRCEMLLTGWL
Ga0307476_100013742	3300031715	Hardwood Forest Soil	MAEDSVARRARYFLYLLGGVFVAAGFALEMVPMLANVVHPLAGRVCAGIGAVILSAGRFGSDRFVRRCEVVLTGWR
Ga0302321_1023607742	3300031726	Fen	MSDEPPVRRARLFLYLLGGVFVALGFALEGVPMMAAVAPELSGRISAGLGALILGAGRFGSD
Ga0307479_109995631	3300031962	Hardwood Forest Soil	VPGARADSLSVRGLGSIICGGMTEDKATRRARYFLYLLGGVFVALGFSLEMVPPLAAIAPSLAGRICAGIGAVVLSAGRFGSDRFVRRCEMVLTGWR
Ga0307479_112092461	3300031962	Hardwood Forest Soil	MSEDKAARRARYFLYLLGGAFVALGFSLEMVPALAAVAPSLAGRVSAGIGAVILSAGRFGSDRFVRRCETLLTGRV
Ga0335079_119330061	3300032783	Soil	MPEDAAARRARYFLYVVGGVFVALGFSLELVPALAAVTPDPAGRVCAGIGAIILTAGRFGSDAFVRRCEAALTGWF
Ga0335070_100380216	3300032829	Soil	MPEDPAARRARYFLYVLGGVFVGLGFALDLIPALAEVAPQLAGRLCAGIGAIILAVGRFGSDTLVRRCETGLTGWF
Ga0335083_101285676	3300032954	Soil	MPEDPAARRARYFLYALGGVFVGLGFALELIPALAEVAPPLAGRLCAGIGAIILTAGRFGSDAFVRRCATGLAGWL
Ga0335077_122226392	3300033158	Soil	VEPPTVGPARQLAHPMPEDAAARRARYFLYVVGGVFVALGFSLELVPALAAVTPDPAGRVCAGIGAIILTAGRFGSDAFVRRCEAALTGWF
Ga0307507_103074743	3300033179	Ectomycorrhiza	MTDDLPARRARYFLYLLGGVFVALGFALEMVPAMAAVAPELAGRICAGIGALILSLGRFGSDRFVLRCEMLLTGWF
Ga0307510_10000002281	3300033180	Ectomycorrhiza	MAEDPSARRARYFLYLLGGVFVALGFALDRVPAMAAVTPDLAGRVSAGIGALILAVGRFGSDRLVRRCEMLLTGWF
Ga0307510_100364119	3300033180	Ectomycorrhiza	VPVSGARAIESGGMHDDPARRARYFLYLLGGVFVALGFALEMVPAMAAVAPELAGRISAGMGALILAAGRFGSDRFVLRCEMLLTGWF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079690

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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