Metagenome / Metatranscriptome Family F079689

Basic Information
Family ID	F079689
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	48 residues
Representative Sequence	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASL
Number of Associated Samples	98
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.25 %
% of genes near scaffold ends (potentially truncated)	97.39 %
% of genes from short scaffolds (< 2000 bps)	93.04 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (99.130 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.348 % of family members)
Environment Ontology (ENVO)	Unclassified (33.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.957 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.67% β-sheet: 0.00% Coil/Unstructured: 49.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13365	Trypsin_2	51.30
PF13180	PDZ_2	45.22
PF13450	NAD_binding_8	0.87
PF07690	MFS_1	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.13 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.61 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Chroococcidiopsidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Chroococcidiopsidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Chroococcidiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
Unclassified	root	N/A	0.87 %

Name	Rank	Taxonomy	Distribution
Chroococcidiopsis thermalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → Chroococcidiopsis thermalis	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
Unclassified	root	N/A	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101681861	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300001169\|JGI12661J13543_105411	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300002245\|JGIcombinedJ26739_101867446	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005440\|Ga0070705_100943386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	697	Open in IMG/M
3300005559\|Ga0066700_10318052	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005602\|Ga0070762_10804794	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005764\|Ga0066903_104224723	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300005843\|Ga0068860_101389493	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300006028\|Ga0070717_11695728	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300006052\|Ga0075029_100499153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → Chroococcidiopsis thermalis	803	Open in IMG/M
3300006893\|Ga0073928_10566515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	806	Open in IMG/M
3300006893\|Ga0073928_10649888	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300007265\|Ga0099794_10514449	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300009038\|Ga0099829_11732286	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009089\|Ga0099828_11461064	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300009547\|Ga0116136_1066155	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300009700\|Ga0116217_10572777	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300010159\|Ga0099796_10230257	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300010159\|Ga0099796_10404404	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010360\|Ga0126372_12649964	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010401\|Ga0134121_10093259	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300012096\|Ga0137389_11470545	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300012198\|Ga0137364_10087028	All Organisms → cellular organisms → Bacteria	2173	Open in IMG/M
3300012199\|Ga0137383_10189942	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300012203\|Ga0137399_11054702	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300012205\|Ga0137362_10573262	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300012205\|Ga0137362_10903419	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012206\|Ga0137380_10688658	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300012210\|Ga0137378_10266334	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300012210\|Ga0137378_11808885	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300012211\|Ga0137377_11226933	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012351\|Ga0137386_11033044	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012354\|Ga0137366_10049066	All Organisms → cellular organisms → Bacteria	3243	Open in IMG/M
3300012918\|Ga0137396_10518656	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300012944\|Ga0137410_10751260	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300012957\|Ga0164303_10206902	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300012988\|Ga0164306_11981327	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300013307\|Ga0157372_12414153	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300014158\|Ga0181521_10193771	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300017823\|Ga0187818_10143473	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300017823\|Ga0187818_10152355	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300017972\|Ga0187781_10105716	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300018001\|Ga0187815_10063289	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300018022\|Ga0187864_10323930	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300018022\|Ga0187864_10471022	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300018433\|Ga0066667_11993742	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300019887\|Ga0193729_1265859	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300019996\|Ga0193693_1043964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300020580\|Ga0210403_10238504	All Organisms → cellular organisms → Bacteria	1492	Open in IMG/M
3300020580\|Ga0210403_10761786	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300021170\|Ga0210400_10978168	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300021171\|Ga0210405_10256836	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300021180\|Ga0210396_10749369	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300021402\|Ga0210385_10903969	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300021402\|Ga0210385_11568078	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300021403\|Ga0210397_11354899	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300021407\|Ga0210383_10099450	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300021420\|Ga0210394_11823358	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300021432\|Ga0210384_10412605	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300021432\|Ga0210384_11769095	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300021477\|Ga0210398_11320651	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300021479\|Ga0210410_10923042	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300022531\|Ga0242660_1043666	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300022533\|Ga0242662_10111628	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300022724\|Ga0242665_10199789	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300024182\|Ga0247669_1078101	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300025922\|Ga0207646_11452952	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300026297\|Ga0209237_1231162	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300026298\|Ga0209236_1305732	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300026310\|Ga0209239_1345396	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300026469\|Ga0257169_1052998	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300026480\|Ga0257177_1017708	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300026480\|Ga0257177_1036510	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300026482\|Ga0257172_1073512	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300026499\|Ga0257181_1063412	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300026514\|Ga0257168_1069319	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300026548\|Ga0209161_10056022	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300026551\|Ga0209648_10722936	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300027635\|Ga0209625_1085722	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300027671\|Ga0209588_1210478	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300027853\|Ga0209274_10566926	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300027853\|Ga0209274_10639419	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300027884\|Ga0209275_10390172	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300027889\|Ga0209380_10459194	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300027889\|Ga0209380_10519639	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300027911\|Ga0209698_11304015	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300028807\|Ga0307305_10259584	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300028828\|Ga0307312_10863529	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300029636\|Ga0222749_10141695	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300029943\|Ga0311340_11207128	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300030494\|Ga0310037_10071434	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300030707\|Ga0310038_10377529	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300030854\|Ga0075385_11058649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300030855\|Ga0075374_11227984	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300030935\|Ga0075401_11311070	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031057\|Ga0170834_111263072	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300031199\|Ga0307495_10047698	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300031231\|Ga0170824_104564046	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300031231\|Ga0170824_111310737	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300031720\|Ga0307469_11524702	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031720\|Ga0307469_12425418	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031753\|Ga0307477_10049352	All Organisms → cellular organisms → Bacteria	2893	Open in IMG/M
3300031754\|Ga0307475_10032627	All Organisms → cellular organisms → Bacteria → Acidobacteria	3798	Open in IMG/M
3300031754\|Ga0307475_10262572	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300031820\|Ga0307473_11105255	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031962\|Ga0307479_11837268	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300032174\|Ga0307470_10988960	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300032180\|Ga0307471_102786866	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300032180\|Ga0307471_103912136	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300032205\|Ga0307472_100326075	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300032205\|Ga0307472_101075338	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300032515\|Ga0348332_12674421	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300032828\|Ga0335080_10621823	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300034817\|Ga0373948_0163342	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.39%
Host-Associated	Host-Associated	2.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.96%
Aquatic	Environmental → Aquatic	10.43%
Plants	Host-Associated → Plants	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.22%
Freshwater	Environmental → Aquatic → Freshwater	6.96%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.74%
Sediment	Environmental → Aquatic → Sediment	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.74%
Peat	Environmental → Terrestrial → Peat	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.17%
Loam	Environmental → Terrestrial → Soil → Loam	11.30%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001169	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1016818612	3300000364	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRNHAEFHLAGSFGAVASLVSFARSTE
JGI12661J13543_1054111	3300001169	Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESMIGSHAEFQLAGSF
JGIcombinedJ26739_1018674462	3300002245	Forest Soil	MSKDGGGGGIRIAVASTSAVRRAGLEGIIRSHSDFHLAGSFGAV
Ga0070705_1009433861	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASLVSFAR
Ga0066700_103180521	3300005559	Soil	MSKRNGGGAIRIAVVATSAVRRAGLENIVRSHAEFQLAGSFGAVASLVSFAPSTAL
Ga0070762_108047941	3300005602	Soil	MAKGNGGGAIRIAVVATSAVRQAGLESTVRSHADFHLAGSFG
Ga0066903_1042247232	3300005764	Tropical Forest Soil	MAKANGGGAIRIAVLATSAFRRAWLESIVRSHADFHLAGNFGELA
Ga0068860_1013894932	3300005843	Switchgrass Rhizosphere	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHL
Ga0070717_116957281	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MARRNGGGAIRVAVVATSAVRRAGLENMVHSNAEFQLVGSFGAVPSLVSS
Ga0075029_1004991532	3300006052	Watersheds	MSKRNGGGAIRVIVAATSAVRRAGFETMIRSHPDCQLAGSTASTARVS
Ga0073928_105665151	3300006893	Iron-Sulfur Acid Spring	MAKGNGGGAIRIAVVATSAVRRAGLESIVRSHTDFHLAGSFGAVASLVPFARNTEL
Ga0073928_106498881	3300006893	Iron-Sulfur Acid Spring	MSKRSGGGAIRIAVAATSAVRRVGLEGIVRSQAECQLAGSFGAAAS
Ga0099794_105144492	3300007265	Vadose Zone Soil	MSKRNGGGAIRIAVMAASAVRRAKLESIVRSHPEFQLAGSFGAVASLIQQ*
Ga0099829_117322861	3300009038	Vadose Zone Soil	MAEGNGGGAIRIAVVATSAVRRAWLESIVRSHADFHLAGSFGAVASLVSFARNT
Ga0099828_114610641	3300009089	Vadose Zone Soil	MSKRSGGGAIQIAVATTSAVRRGGLESIVRSHPEFHLAGSFGAVASLVSFARSAELDV
Ga0116136_10661552	3300009547	Peatland	MSKRSGGGAIRIAVAATSAVRRAGLESIIRSHPEFQLAGSFGAVASLVSFAHG
Ga0116217_105727771	3300009700	Peatlands Soil	MSKRSGGGAIRIAVAATSAVRRAGLESIIRSHPEFQLA
Ga0099796_102302571	3300010159	Vadose Zone Soil	MSKRTGGGAIRIAVAATSAVRRAGLETIIRSHAEFHLAGSFG
Ga0099796_104044041	3300010159	Vadose Zone Soil	MSKRNGGGAIRIAVMATSADRRAGLESIVRSHAEFQLAGSFGAMASLVSFARSSGLDVI
Ga0126372_126499641	3300010360	Tropical Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSQAEFHLAGS
Ga0134121_100932595	3300010401	Terrestrial Soil	MSKRTGGGAIRIAVAATSAVRRAGLESFIRSHAEFHLAGSFGAV
Ga0137389_114705452	3300012096	Vadose Zone Soil	MSKRSGGGAIQIAVATTSAVRRGGLESIVRSHPEFHLAGSFGAVASLVSFARS
Ga0137364_100870281	3300012198	Vadose Zone Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVAS
Ga0137383_101899421	3300012199	Vadose Zone Soil	MSKRSGGGAIRIAVATTSAVLRARLESIVRSHAEFHLAGSFGAMASLVSFAHSAELDVI
Ga0137399_110547022	3300012203	Vadose Zone Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGVVASLVSFARST
Ga0137362_105732623	3300012205	Vadose Zone Soil	MSKRNGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAAASVV
Ga0137362_109034192	3300012205	Vadose Zone Soil	MSKRSDGGAIRIAVATTSAVRRAGLESIVRSHADFHLAGSFGTVGSLVSFARSTELDVIV
Ga0137380_106886582	3300012206	Vadose Zone Soil	MSKRSGGGAIRIAVATTSAVRRARLESIVRSHAEFHLAGSFGAMASLVSFAHSAELHVIV
Ga0137378_102663341	3300012210	Vadose Zone Soil	MSKRGGGAIRVAVAATSAVRRVGLESIVRSNPEFQLAGSFG
Ga0137378_118088852	3300012210	Vadose Zone Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHPEFQLAGSFG
Ga0137377_112269331	3300012211	Vadose Zone Soil	MSKRSGGGAIRIAVATTSAVRRVGLESIVRNQAGFKLAGSFGAVANLVSFARST
Ga0137386_110330442	3300012351	Vadose Zone Soil	MSKRSGGGAIRIAVATTSAVRRAGLESIVRSHAEFQLAGSFGAVASLVSFAR
Ga0137366_100490661	3300012354	Vadose Zone Soil	MARGNGGGAIRIAVVATSAVRRAGLESIVRSHADFHLAGSFGAVASLTPFAR
Ga0137396_105186561	3300012918	Vadose Zone Soil	MSKRNGGGAIRIAVVATSAVRRAGLENIVRSHAEFQLAGSF
Ga0137410_107512601	3300012944	Vadose Zone Soil	MAKRNGGGAIRIAVMATSAVRRAKLQSIVRSHPEFQLAGSFGAVASLMSFARSTELDIIV
Ga0164303_102069022	3300012957	Soil	MSKRKGEGAIRIAVMATSATRRAILEGIVRTHAEFQLAGSFGTVANLMSSMR
Ga0164306_119813272	3300012988	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVA
Ga0157372_124141532	3300013307	Corn Rhizosphere	VSKRSGGGAIRIAVAATSAVRRAGLESIVHSQAEFQLAGSFGAVASLLSFARNTELDVIV
Ga0181521_101937712	3300014158	Bog	MSKRSGGGAIRIAVAATSAVRRAGLESIIRSHPEFQLAGSFG
Ga0187818_101434732	3300017823	Freshwater Sediment	MSKRNGGGAIRVVVAATSAVRRAGLESIIRSQPDFQLAASTGSLARLGL
Ga0187818_101523552	3300017823	Freshwater Sediment	MSKRGGGGAIRIAVAATSAVRRVGLESIVRSHPEFKLAA
Ga0187781_101057164	3300017972	Tropical Peatland	MSKQNGGDGIRVVVAAASAVRRAGLEAIVRSESDLHLAGSTGALSRLDLLSRNAN
Ga0187815_100632891	3300018001	Freshwater Sediment	MSKRNGGGAIRVLVAATSAVRRAGLESIIRSQPDFQLAASVGSLARLGSHV
Ga0187864_103239301	3300018022	Peatland	MSKRSGGGAIRIAVAATSAVRRAGLESIIRSHPEFQLAGSFGAVA
Ga0187864_104710221	3300018022	Peatland	MSKRNGGGAIRIAVAATSAVRRAGLESIIRSHPEFQLAGSFGAVA
Ga0187858_104735561	3300018057	Peatland	VAVAATSAVRRAGLESIIRGHPDFPLAGSFGAVASLVSFARGTELDVIVI
Ga0066667_119937422	3300018433	Grasslands Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHAEFQLAGSFGAVA
Ga0193729_12658591	3300019887	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFQLAGSFGAVASLVSFA
Ga0193693_10439642	3300019996	Soil	MSKRNGGGAIKIAVIATSADRRAGLESIVRSHAEFRLEGSFGAMAV
Ga0210403_102385041	3300020580	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASLVSFARS
Ga0210403_107617861	3300020580	Soil	MSKRKGGGAIKIAVVATSAFRRAALESIIRSQPEFHLEGSFGAVASLVSFAGRSELDVI
Ga0210400_109781681	3300021170	Soil	MSKRNGGGAIKIAVVATSAVRRAGLESIVRSHAEFHL
Ga0210405_102568363	3300021171	Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHPEFQLAGSFGAVES
Ga0210396_107493691	3300021180	Soil	MANGNGGGAIRIAVVATSAVRRAKLESIVRSHADFHLAGSFGAVASLVPFARNTELDVIV
Ga0210385_109039691	3300021402	Soil	MSKRNGGGAIRIAVMATSAVRRAKLENIVRSHAEFQLAGSFGAVAS
Ga0210385_115680781	3300021402	Soil	MSQRSGGGAIRVAVVASSAVRRAGLESIVRSHAEFHLAGSFGAVASLV
Ga0210397_113548992	3300021403	Soil	MSKRSGGGAIRIAVATASAVRRAGLESIVRGHADFQLAGSFGGLASLASFARSTE
Ga0210383_100994503	3300021407	Soil	MSKRTGGGAIRIAVAAASAVRRAGLESIIRSHAEFHLAGSFGAVASLESFAHSTEL
Ga0210394_118233582	3300021420	Soil	MSQRNGGGAIRIAVVATSAVRRAGLESIIRGQPEFHLEGSFGSHGY
Ga0210384_104126052	3300021432	Soil	MSKRSGGGAIRIAVATASAVRRAGLESIVRGHADFHLAGSFGAVASLVSFARSAELDVMV
Ga0210384_117690952	3300021432	Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHAEFQLAGSFG
Ga0210398_113206511	3300021477	Soil	MAKGNGGGAIRIAVVATSAVRRAKLESIVRSHADFHPAGSFGAVASLVP
Ga0210410_109230421	3300021479	Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHAEFQLAGSFGAVANLMSFARSADLDVIV
Ga0242660_10436662	3300022531	Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHPEF
Ga0242662_101116282	3300022533	Soil	MSKRNGGGAIKIAVVATSAVRRAKLESIVRSHPEFQLAGGFGAVASLMSFARSTE
Ga0242665_101997892	3300022724	Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHAEFQLAGSFGAVASLMSFARSA
Ga0247669_10781012	3300024182	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGA
Ga0207646_114529522	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTKRNGGGSIRVVVAATSAVRRTGLEAIVRSQPDFQLAASTGTIAHLSTSVMVTGLT
Ga0209237_12311622	3300026297	Grasslands Soil	MSKRNGGGAIRIAVVATSAVRRAGLESTVRSHADFHLAGSFGAVA
Ga0209236_13057322	3300026298	Grasslands Soil	MSKRNGGGAIRIAVVATSAVRRAGLENIVRSHAEFQLAG
Ga0209239_13453962	3300026310	Grasslands Soil	MSKRNGGGAIRIAVVATSAVRRAGLENIVRSHAEFQLA
Ga0257169_10529982	3300026469	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSQAEFHLAGSFGAVASLVSF
Ga0257177_10177082	3300026480	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASL
Ga0257177_10365102	3300026480	Soil	MSKRSGGGAIRIAVATTSAVRRAGLESIVRSHADFHLAGSFGTVGSLVSFARSTEL
Ga0257172_10735121	3300026482	Soil	MSKRNGGGAIRIAVATTSAVRRAGLERIVRSHAEFQLAGSFGAMASLVSFARSAEL
Ga0257181_10634122	3300026499	Soil	MSKRSGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGTMASLV
Ga0257168_10693191	3300026514	Soil	MSKPGGGGAIRIAVAATSAVRRVGLESIIRSHAEFQLAGSFGAA
Ga0209161_100560225	3300026548	Soil	MSKQSGGGAIRIAVATTSAVLRARLESIVRSHAEFHLAGSFGAMASLVSFAHSAELDVI
Ga0209648_107229362	3300026551	Grasslands Soil	MSKPSGGVAIRIAVAATSAVRRVGLESIIGSHAEFQLAGSFGAAASLASFETGLI
Ga0209625_10857221	3300027635	Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFQ
Ga0209588_12104781	3300027671	Vadose Zone Soil	MSKRNGGGAIRIAVATTSAVRRAGLESIVRSHAEF
Ga0209274_105669262	3300027853	Soil	MSKRNGGGAIRIAVMATSAVRRAKLENIVRSHAEFQLAGS
Ga0209274_106394191	3300027853	Soil	MSKRSGGGAIRIAVAATSAVRRVGLESIVRGHPEFQLAGSFGAV
Ga0209275_103901721	3300027884	Soil	MSKRSGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGTMASLASFAR
Ga0209380_104591941	3300027889	Soil	MAKGNGGGAIRIAVVATSAIRRAGLESIVRSHADFHL
Ga0209380_105196392	3300027889	Soil	MSKRNGGGAIRIAVAATSAVCRTRLETIIRHQPDFYLAGSFDT
Ga0209698_113040152	3300027911	Watersheds	MSKRGGGGAIRVAVATTSAVRRAGLESIIRSHPEFYLAGSFGDVANLV
Ga0307305_102595841	3300028807	Soil	MSKRNGGGAIKIAVMATSAVRRAGLESIVRSHDEFQLAGSFGAMPS
Ga0307312_108635292	3300028828	Soil	MSKRNGGGAIKIAVVATSAVRRAGLENIVRSQAEFQLAGSFGAM
Ga0222749_101416951	3300029636	Soil	MSKRSGGGAIRIAVAATSAVRRMGLEGIVRSQAEFQLAGSFGAAASLASFARSTELDVI
Ga0311340_112071281	3300029943	Palsa	MSKRNGGGAIRIAVVATSAVRRARLESVVRIHPEFQLAGSFGAVASLVSFARSV
Ga0310037_100714341	3300030494	Peatlands Soil	MSQRNGGGAIRIALAATSAVRRAGLESIVRSHAEF
Ga0310038_103775291	3300030707	Peatlands Soil	MSKRSGGGAIRIAVAATSAVRRAGLESIIRSHPEFQLAGSFGAVASLVSF
Ga0075385_110586492	3300030854	Soil	VNGPEFRPKRSGGGAIRIAVAATSSVRRAGLESIIRSHAEFHLAGSFGAVA
Ga0075374_112279841	3300030855	Soil	MAKGNGGGAIRIAVMATSAVRRAGLESIVRSHADFHLAGS
Ga0075401_113110702	3300030935	Soil	MAKGNGGGAIRIAVMATSAVRRAKLESIVRSHAEFQLAGSFGAVASLMSFARSTELDRR
Ga0170834_1112630721	3300031057	Forest Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHAEFQ
Ga0307495_100476981	3300031199	Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASLVSFARST
Ga0170824_1045640461	3300031231	Forest Soil	MAKGTGGGAIRIAVVATSAVRRAGLESIVRSHPDFHLAGSFGAV
Ga0170824_1113107372	3300031231	Forest Soil	MTKRTGGGAIRIAVAAASAVRRAGLESIIRSHAEFHLA
Ga0307469_115247022	3300031720	Hardwood Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVARLVSFARSTEL
Ga0307469_124254182	3300031720	Hardwood Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASLVSFARSTELD
Ga0307477_100493526	3300031753	Hardwood Forest Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHPEFQLAGSFGA
Ga0307475_100326274	3300031754	Hardwood Forest Soil	MSKRNGGGAIKIAVVATSAVRRAGLESIVRSHAEFQLAGSFGAMTGLVSFAHSN
Ga0307475_102625721	3300031754	Hardwood Forest Soil	MSKRSGGGAIRVAVAATSAVRRGGLERIVRSHVDLHLAGSFGTVARLAAFARSNEVD
Ga0307473_111052552	3300031820	Hardwood Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASLVSFARSAELD
Ga0307479_118372681	3300031962	Hardwood Forest Soil	MSKRNGGGAIRIAVMATSAVRRAKLESIVRSHADFHLAGSFGAVASLMSFARNTELDVII
Ga0307470_109889602	3300032174	Hardwood Forest Soil	MSKRNGGGAIQIAVAATSAVRRAGLESIVRSHAEF
Ga0307471_1027868662	3300032180	Hardwood Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASLVSFACSTELDV
Ga0307471_1039121362	3300032180	Hardwood Forest Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLA
Ga0307472_1003260751	3300032205	Hardwood Forest Soil	MSKRSGGGAIRIAVAATSAIRRAGLESIIRSLPEFQL
Ga0307472_1010753381	3300032205	Hardwood Forest Soil	MSKRNGGGAIQIAVAATSAVRRAGLESIVRSHAEFQLAGSFGAVANVVSFARSSELD
Ga0348332_126744211	3300032515	Plant Litter	MSKRTGGGAIRIAVAATSAVRRARLESIIGSHAEFQLAGSFGTLAS
Ga0335080_106218232	3300032828	Soil	MSKRNGGGAIRIAVAATSAVRRAGLESIIRGQPEFQLAGSFGR
Ga0373948_0163342_2_175	3300034817	Rhizosphere Soil	MSKRTGGGAIRIAVAATSAVRRAGLESIIRSHAEFHLAGSFGAVASLVSFARSTELDV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079689

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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