Metagenome / Metatranscriptome Family F079688

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079688
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	59 residues
Representative Sequence	MVTSRPSEDVLAVYDAHGWPQNQYLWRMMGRGGLQTNEAPLVTNLEKAFEQATTK
Number of Associated Samples	105
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.64 %
% of genes near scaffold ends (potentially truncated)	90.43 %
% of genes from short scaffolds (< 2000 bps)	87.83 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.130 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.652 % of family members)
Environment Ontology (ENVO)	Unclassified (36.522 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.391 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.05% β-sheet: 24.10% Coil/Unstructured: 63.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00883	Peptidase_M17	38.26
PF02789	Peptidase_M17_N	2.61
PF01433	Peptidase_M1	1.74
PF00248	Aldo_ket_red	0.87
PF03693	ParD_antitoxin	0.87
PF01402	RHH_1	0.87
PF13502	AsmA_2	0.87
PF05016	ParE_toxin	0.87
PF06250	YhcG_C	0.87
PF03308	MeaB	0.87
PF01613	Flavin_Reduct	0.87
PF01713	Smr	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	40.87
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	1.74
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.87
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.87
COG4804	Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.13 %
Unclassified	root	N/A	40.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.13 %
Unclassified	root	N/A	40.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.13 %
Unclassified	root	N/A	40.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	25.22 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.61 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	25.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.96 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.74 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.96 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	1.74 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.87 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.22 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	1.74 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.87 %
Scytonemataceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae	0.87 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.48 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	1.74 %
unclassified Roseomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas	0.87 %
Ereboglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Ereboglobus	0.87 %
Scytonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.96 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.48 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	1.74 %
Roseomonas sp. TAS13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	0.87 %
Ereboglobus luteus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Ereboglobus → Ereboglobus luteus	0.87 %
Scytonema hofmannii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema hofmannii	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1032894	Not Available	530	Open in IMG/M
3300001546\|JGI12659J15293_10151505	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300002245\|JGIcombinedJ26739_100860382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	788	Open in IMG/M
3300002907\|JGI25613J43889_10007042	All Organisms → cellular organisms → Bacteria	3080	Open in IMG/M
3300003370\|JGI26337J50220_1032982	Not Available	591	Open in IMG/M
3300004082\|Ga0062384_100033029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2357	Open in IMG/M
3300004092\|Ga0062389_102060454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → Scytonema hofmannii	746	Open in IMG/M
3300004139\|Ga0058897_10986960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300004631\|Ga0058899_10673941	Not Available	523	Open in IMG/M
3300005468\|Ga0070707_101231564	Not Available	715	Open in IMG/M
3300005542\|Ga0070732_10644565	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005591\|Ga0070761_10467658	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005602\|Ga0070762_10640885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	709	Open in IMG/M
3300005602\|Ga0070762_10731998	Not Available	665	Open in IMG/M
3300005610\|Ga0070763_10144147	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1239	Open in IMG/M
3300005610\|Ga0070763_10850127	Not Available	541	Open in IMG/M
3300005921\|Ga0070766_10092987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1774	Open in IMG/M
3300006893\|Ga0073928_10654818	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300007258\|Ga0099793_10448947	Not Available	637	Open in IMG/M
3300007788\|Ga0099795_10587359	Not Available	529	Open in IMG/M
3300009088\|Ga0099830_10267498	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300009143\|Ga0099792_10085333	Not Available	1626	Open in IMG/M
3300009665\|Ga0116135_1042474	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300009665\|Ga0116135_1288574	Not Available	645	Open in IMG/M
3300009764\|Ga0116134_1085285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. TAS13	1157	Open in IMG/M
3300010379\|Ga0136449_102380414	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300011120\|Ga0150983_15830252	Not Available	793	Open in IMG/M
3300012683\|Ga0137398_10514569	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300012944\|Ga0137410_10655148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	872	Open in IMG/M
3300014489\|Ga0182018_10507095	Not Available	638	Open in IMG/M
3300014657\|Ga0181522_10423965	Not Available	797	Open in IMG/M
3300015195\|Ga0167658_1074381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300017823\|Ga0187818_10282532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	728	Open in IMG/M
3300017931\|Ga0187877_1006239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8459	Open in IMG/M
3300018001\|Ga0187815_10260268	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300018007\|Ga0187805_10632646	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300018017\|Ga0187872_10307911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300018035\|Ga0187875_10021194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3952	Open in IMG/M
3300018047\|Ga0187859_10066681	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300019240\|Ga0181510_1364462	Not Available	530	Open in IMG/M
3300019786\|Ga0182025_1005472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1697	Open in IMG/M
3300019786\|Ga0182025_1299711	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300019786\|Ga0182025_1344302	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300021151\|Ga0179584_1122703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	606	Open in IMG/M
3300021181\|Ga0210388_10479073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1093	Open in IMG/M
3300021401\|Ga0210393_11021703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	669	Open in IMG/M
3300021405\|Ga0210387_11089843	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300021433\|Ga0210391_10272515	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300021433\|Ga0210391_11460470	Not Available	525	Open in IMG/M
3300022708\|Ga0242670_1052287	Not Available	585	Open in IMG/M
3300022709\|Ga0222756_1082279	Not Available	528	Open in IMG/M
3300022711\|Ga0242674_1047173	Not Available	584	Open in IMG/M
3300022712\|Ga0242653_1113003	Not Available	507	Open in IMG/M
3300022718\|Ga0242675_1131333	Not Available	510	Open in IMG/M
3300022722\|Ga0242657_1259718	Not Available	501	Open in IMG/M
3300022726\|Ga0242654_10079116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	994	Open in IMG/M
3300022727\|Ga0224567_103673	Not Available	552	Open in IMG/M
3300022734\|Ga0224571_103634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	997	Open in IMG/M
3300023019\|Ga0224560_103571	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1009	Open in IMG/M
3300024049\|Ga0233359_1028442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	639	Open in IMG/M
3300024271\|Ga0224564_1065374	Not Available	720	Open in IMG/M
3300025404\|Ga0208936_1051362	Not Available	560	Open in IMG/M
3300025612\|Ga0208691_1103143	Not Available	642	Open in IMG/M
3300026555\|Ga0179593_1231569	Not Available	2393	Open in IMG/M
3300027570\|Ga0208043_1115592	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300027575\|Ga0209525_1038692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1173	Open in IMG/M
3300027795\|Ga0209139_10044247	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1569	Open in IMG/M
3300027812\|Ga0209656_10035256	All Organisms → cellular organisms → Bacteria	2930	Open in IMG/M
3300027853\|Ga0209274_10666888	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300027854\|Ga0209517_10203040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1221	Open in IMG/M
3300027855\|Ga0209693_10334186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	736	Open in IMG/M
3300027855\|Ga0209693_10529301	Not Available	562	Open in IMG/M
3300027879\|Ga0209169_10068430	All Organisms → cellular organisms → Bacteria	1835	Open in IMG/M
3300027889\|Ga0209380_10181293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1234	Open in IMG/M
3300027895\|Ga0209624_10302547	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1065	Open in IMG/M
3300027895\|Ga0209624_10477697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	830	Open in IMG/M
3300027908\|Ga0209006_11248758	Not Available	578	Open in IMG/M
3300028047\|Ga0209526_10159329	Not Available	1578	Open in IMG/M
3300028780\|Ga0302225_10185644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1002	Open in IMG/M
3300028866\|Ga0302278_10399308	Not Available	609	Open in IMG/M
3300029636\|Ga0222749_10783488	Not Available	522	Open in IMG/M
3300029701\|Ga0222748_1052173	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300029907\|Ga0311329_10432021	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300029911\|Ga0311361_10527438	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300029918\|Ga0302143_1108306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Ereboglobus → Ereboglobus luteus	656	Open in IMG/M
3300029918\|Ga0302143_1169532	Not Available	526	Open in IMG/M
3300029953\|Ga0311343_10210320	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300030007\|Ga0311338_12019987	Not Available	511	Open in IMG/M
3300030020\|Ga0311344_10490270	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300030057\|Ga0302176_10365682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300030580\|Ga0311355_11809640	Not Available	518	Open in IMG/M
3300030581\|Ga0210270_1364624	Not Available	697	Open in IMG/M
3300030730\|Ga0307482_1248999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300030740\|Ga0265460_10974140	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300030815\|Ga0265746_1005170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1347	Open in IMG/M
3300031022\|Ga0138301_1438667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300031234\|Ga0302325_12877766	Not Available	561	Open in IMG/M
3300031474\|Ga0170818_108822797	Not Available	554	Open in IMG/M
3300031525\|Ga0302326_12227232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	698	Open in IMG/M
3300031708\|Ga0310686_105137966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300031708\|Ga0310686_114669619	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300031715\|Ga0307476_10390372	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1027	Open in IMG/M
3300031718\|Ga0307474_10012161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6231	Open in IMG/M
3300031817\|Ga0316046_111611	Not Available	531	Open in IMG/M
3300031872\|Ga0316033_111612	Not Available	551	Open in IMG/M
3300032072\|Ga0326631_114060	Not Available	557	Open in IMG/M
3300032515\|Ga0348332_14301646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	859	Open in IMG/M
3300032954\|Ga0335083_10728368	Not Available	802	Open in IMG/M
3300034124\|Ga0370483_0004411	Not Available	3844	Open in IMG/M
3300034163\|Ga0370515_0067058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.87%
Aquatic	Environmental → Aquatic	18.26%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.09%
Freshwater	Environmental → Aquatic → Freshwater	17.39%
Peat	Environmental → Terrestrial → Peat	13.04%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.74%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	17.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.09%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.74%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.22%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.48%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.61%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.74%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.22%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.22%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.48%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.61%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.74%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.87%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.87%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.87%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003370	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022727	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300024049	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030581	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO031SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031817	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031872	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10328942	3300001131	Forest Soil	LVYEAQQADIVLMVTSRPSEDVLAVYDARGWPRNEYLWRMMGRSGLQKGEAPLITNLEKAFNQAATK*
JGI12659J15293_101515051	3300001546	Forest Soil	MSRPSEDVLAVYDAHGWPQSQYLWRMMGRSGLQQGESPLVTNLETAFSLATAK*
JGIcombinedJ26739_1008603821	3300002245	Forest Soil	KFILVYEPHQADIVLMVMSRPSEDVLAVYDAHGWPQDQYLWRMTGRSGLQPSEAPLVTNLEKAFEQATAK*
JGI25613J43889_100070426	3300002907	Grasslands Soil	FALVYEPRQADIVLMVMSRPTEDILAVYDAHGWPENQYLWRMMGRSGLQPSESPLVTNLEKAFDRATAAK*
JGI26337J50220_10329823	3300003370	Bog Forest Soil	VTSRPSEDVLAVYDARGWPGNEYLWRMMGRSGLQKGEAPLVTNLEKAFNQAATK*
Ga0062384_1000330291	3300004082	Bog Forest Soil	SRPSEDVLAVYDAHGWPENQYLWRMMGRSGLQPSEAPLVTNLEKAFALATAAK*
Ga0062389_1020604541	3300004092	Bog Forest Soil	SRPSEDVLAVYDAHRWPDNVYLWRMMGRNGLQAGEAPFVTNLEKAFEQATAGK*
Ga0058897_109869602	3300004139	Forest Soil	IILMVTSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQQGEAPLVTSLEKAFAQATAGK*
Ga0058899_106739411	3300004631	Forest Soil	LMVMSRPSEDILAVYDAHGWPARSEYLWRMTGRNGLQQGESPLVTDLEQAFDQARASK*
Ga0070707_1012315641	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LMVTSRPSEDILAVYDAHGWPSDQYLWRMMGRSGLQQNETPFITDLQKAFERATTKR*
Ga0070732_106445652	3300005542	Surface Soil	AVYDDQGWRHNGQYLWRMTSRKGLQKGETPLVTNLEKAFEQAANPTPVKQ*
Ga0070761_104676582	3300005591	Soil	EDVLAVYDAHGWPQSQYLWRMMGRSGLQQGESPLVTNLETAFSLATAK*
Ga0070762_106408851	3300005602	Soil	LMVTSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQPGESPLLTNLEKAFTLATTK*
Ga0070762_107319982	3300005602	Soil	KPSQADIVLMVTSRPSEDVLAVYDAHGWPQSDEFLWRMMGRNGLQTGETPLVTNLEKAFAAATATK*
Ga0070763_101441471	3300005610	Soil	VMSRPSEDVLAVYDAHGWPQNQYLWRMMGRSGLQTGETPLATNLEKAFDQATTK*
Ga0070763_108501271	3300005610	Soil	NQADIVLMVTSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQQGESPLVTNLEKAFTLATTK*
Ga0070766_100929871	3300005921	Soil	VYEPHQADIILMVMSRPSEDVLAIYDAHGWPQNQYLWRMTGRSGLQPSETPLLTDLEKAFQQATTK*
Ga0073928_106548181	3300006893	Iron-Sulfur Acid Spring	QADIVLMVTSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQQSESPLVTNLEKAFTLATTK*
Ga0099793_104489473	3300007258	Vadose Zone Soil	RQADIVLMVMSRPTEDILAVYDAHGWPENQYLWRMMGRSGLQPSESPLVTNLEKAFDLATARK*
Ga0099795_105873592	3300007788	Vadose Zone Soil	GKFIVVYEPRQADIVLMVTSLPSEDILAVYDAHGWPRNQYLWRMMGRGGLQQNEAPLVVNLQKAFDRATAPK*
Ga0099830_102674981	3300009088	Vadose Zone Soil	KFTLVYEPQQADIVLMVTSRPSEDILAVYDVHGWPSDQYLWRMMGRSGLQQNETPFITDLQKAFDRATTKR*
Ga0099792_100853333	3300009143	Vadose Zone Soil	TSRPSEDILAVYDAHGWPSDQYLWRMMGRSGLQQNETPFITDLQKAFERATTKR*
Ga0116136_10036947	3300009547	Peatland	VLAVYDAHGWPGNQYLWRMMGLSGLQQGESPLVTNLEKAFALATTK*
Ga0116135_10424744	3300009665	Peatland	QSQQADVILMVMSRPSEDVLAVYDARGWPRNEYLWRMMGRSGLQASEVPFVTDLEKAFDAAKAK*
Ga0116135_12885741	3300009665	Peatland	EDILAVYDAHGWPQNQYLWRMMGRGGLQTNESPLVTNLEKAFEQATTK*
Ga0116134_10852852	3300009764	Peatland	SEDVLAVYDAHGWPQSQYRWRMMGRSGLQKDEAPLVTNLEKAFNLATTK*
Ga0136449_1023804143	3300010379	Peatlands Soil	VMSRPSEDVLAVYDAHGWPRNVYLWRMMGRGGLQPGETPLVTDLEKAFEKATAK*
Ga0150983_158302521	3300011120	Forest Soil	IVLMVMSRPSEDILAVYDAHGWPARSEYLWRMTGRNGLQQGESPLVTDLEQAFDQARASK
Ga0137398_105145693	3300012683	Vadose Zone Soil	VYEPRQADIVLMVTSRPSEDVLAVYDAHGWPRNQYLWRMMGRSGLQQNEAPLVANLEKAFDQAKTK*
Ga0137395_111765211	3300012917	Vadose Zone Soil	VLAVYDAHGWPSDQYLWRMMGRSGLQQSETPFITDLQKAFERATAKR*
Ga0137410_106551483	3300012944	Vadose Zone Soil	ADVVLMVMSRPSEDVLAVYDAHGWPENQYLWRMMGRSGLQASETPLVTNLEKAFDRATAK
Ga0182018_105070952	3300014489	Palsa	SEDVLAVYDAHGGPGNQYLWRMMGRGGLQQGESPLVTNLEKAFALATTK*
Ga0181522_104239653	3300014657	Bog	EDVLAVYDARGWPRNEYLWRMMGRSGLQASEVPFVTDLEKAFDAAKAK*
Ga0167658_10743812	3300015195	Glacier Forefield Soil	MVTSRPSEDILAVYDAHGWPENQYLWRMMGRSGLQPSESPLVTNLEKAFDRATAGK*
Ga0187818_102825323	3300017823	Freshwater Sediment	LVYEANQADIVLMVMSRPTEDVLTVYDAHGWPQNQYLWRMTGRSGLQPSEAPLVTNLEKAFDQAKTK
Ga0187877_10062398	3300017931	Peatland	RPSEDVLGVYDAHGWPGNQYLWRMMGRSGLQQGESPLVTNLEKAFALATTK
Ga0187815_102602681	3300018001	Freshwater Sediment	IVIMVQSRASEDILAVYDAHDRPGNYVWRMMGQNGLQEGETPLVTNLRAAFEKVAQ
Ga0187805_106326461	3300018007	Freshwater Sediment	QADVVLMVMSRPSEDVLAVYDAHSWPRGQYLWRMMGRNGLQQGETPVVTNLEKAFEDKAK
Ga0187872_103079111	3300018017	Peatland	KFTLVYEPHQADIVLMIMSRPSEDVLAVYDAHGWPGNQYLWRMMGRSGLQQGESPLVTNLERAFTLATTK
Ga0187875_100211941	3300018035	Peatland	MVMSRPSEDVLSIYDARGWPGNQYLWRMMGRGGLQKGESPLVTNLEKAFALATTK
Ga0187859_100666811	3300018047	Peatland	MVMSRPSEDVLAVYDAHGWPQNQYLWRMMGRSGLQPTEAPLVTNLEKAFEQATAGK
Ga0181510_13644621	3300019240	Peatland	READIVWMVMSRPSEDVLAVYDAHGWPDNVYLWRMMGRRGLQPSEAPFVTNLEKAFDQATAGK
Ga0182025_10054723	3300019786	Permafrost	DVLALYDAHGWPRNEYLWRMMGRGGMQNAEAPLVTDMEKAFDQTVKK
Ga0182025_12997114	3300019786	Permafrost	YQPGQADIVIMVMSRPTEDVLALYDAHGWPRNEYLWRMMGRGGLQNAEAPLVTDMEKAFDQTVKK
Ga0182025_13443022	3300019786	Permafrost	MVMSRPTEDVLALYDAHGWPRNEYLWRMMARRLQNAEAPLVTDMEKAFDQTVKK
Ga0179584_11227031	3300021151	Vadose Zone Soil	RQADIVLMVTSRPSEDILAVYDAHGWPRNQYLWRMMGRGGLQQNEAPLVANLQKAFDRATAPK
Ga0210388_104790731	3300021181	Soil	LMVTSRPSEDILAVYDAHGWPQNQYLWRMTGRSGLQQGEAPLLTNLEKAFDQATAKTK
Ga0210393_110217031	3300021401	Soil	LVYQPGQADIVLMVTSRPSEDLLAVYDAHGWPRNEYLWRMMGRSGLQKGEAPLVTNLEKAFEQATTK
Ga0210387_110898432	3300021405	Soil	SRPSEDILAVYDGHGGLQNGQYLWRMMGRSGLQQGESPLVTNLEKAFEQAVKK
Ga0210391_102725151	3300021433	Soil	RQADVVLVVMSRPSEDVLAVYDAHGWPQNQYLWRMMGRSGLQTGETPLASDLEKAFDQATTK
Ga0210391_114604701	3300021433	Soil	EDVLAIYDAHGWPQSDEFLWRMTGRNGLQAGETPLVTDMEKAFATATAGK
Ga0242670_10522871	3300022708	Soil	KFILVYEPRQADVVLVVMSRPSEDVLAVYDAHGWPQNQYLWRMTGRGGLQPSETPLITNLQKAFEQATAK
Ga0222756_10822792	3300022709	Soil	VMSRPSEDVLAVYDAHGWPAKSTYLWRMMGRNGLQQGEAPPVTDLEQAFNQARGAK
Ga0242674_10471731	3300022711	Soil	FILVYEPHQADIILMVMSRPSEDVLAVYDAHGWPQNQYLWRMTGRGGLQPSETPLITNLQKAFEQATAK
Ga0242653_11130031	3300022712	Soil	MVMSRPSEDILAVYDAHGWPAKSQYLWRMTGRNGLQQGEAPLVTDLEQAFDQARAAK
Ga0242675_11313331	3300022718	Soil	GKFTIVYEPHQADIILMVTSRPSEDILAVYDAHGWPQNQYLWRMMGRSGLQQSEAPFIADLEKAFSLATTKK
Ga0242657_12597182	3300022722	Soil	LMVTSRPSEDILAVYDAHGWPHNQYLWRMMGRSGLQQGETPLVTNLEREFDRATTGR
Ga0242654_100791161	3300022726	Soil	LVYEPYQADIVLMVTSRPSEDMLAVYDAHGWPHNQYLWRMRGRSGLQQGETPLVTNLEREFDRATTGR
Ga0224567_1036731	3300022727	Plant Litter	MVMSRPSEDILAVYDAHGWPGNSQYLWRMMGRSGLQATEAPLVTNLEKAFEQATAGK
Ga0224571_1036343	3300022734	Rhizosphere	LMVMSRPSEDILAVYDAHGWPGNSQYLWRMMGRSGLQATEAPLVTNLEKAFEQATAGK
Ga0224550_10635593	3300022873	Soil	AVYDAHGWPGNSQYLWRMMGRSGLQPAEAPLVTDLEKAFEQATAGK
Ga0224560_1035711	3300023019	Soil	RPSEDILAVYDAHGWPGNSQYLWRMMGRSGLQATEAPLVTNLEKAFEQATAGK
Ga0233359_10284423	3300024049	Soil	SRPSEDILAVYDAHGWPENQYLWRMMGRSGLQPGESPLITNLEKAFEKATATK
Ga0224564_10653741	3300024271	Soil	EPHQADIILMVMSRPSEDVLAIYDAHGWPQNQYLWRMTGRSGLQPSETPLLTDLEKAFQQATTK
Ga0208936_10513622	3300025404	Peatland	ADIVLMVTSRPSEDILAVYDAHGWPQNQYLWRMMGRGGLQTNESPLVTNLEKAFEQATTK
Ga0208691_11031432	3300025612	Peatland	DVILMVMSRPSEDVLAVYDARGWPRNEYLWRMMGRSGLQASEVPFVTDLEKAFDAAKAK
Ga0179593_12315692	3300026555	Vadose Zone Soil	VTSRPSEDLLAVYDAHGWPRNQYLWRMMGRGGLQPSEAPLVANLEKAFEQATTK
Ga0208043_11155922	3300027570	Peatlands Soil	RPTEDILAVYDAHGWPGNQYLWRVMGRSGLQTGETPMVTNLEKAFEQATAAK
Ga0209525_10386921	3300027575	Forest Soil	SEDILAVYDARGWPQNQYLWRMMGRSGLQQGESPLLTNLEKAFTLATTK
Ga0209139_100442471	3300027795	Bog Forest Soil	QPQQADIILMVMSRPTEDVLSVYDARGWPRNEYLWRMMGRNGLQAGETPFVTNLEKAFDLVKTK
Ga0209656_100352566	3300027812	Bog Forest Soil	SEDILAVYDAQGWPQNQYLWRMTGRSGLQPSEAPLVTNLEKAFEQATAGK
Ga0209274_106668882	3300027853	Soil	EDVLAVYDAHGWPQSQYLWRMMGRSGLQQGESPLVTNLETAFSLATAK
Ga0209517_102030401	3300027854	Peatlands Soil	FTLVYEPQQADIVLMVMSRPSEDVLAVYDAHGWPRNQYLWRMMGRSGLQPSEAPLFANLEKAFNQATTK
Ga0209693_103341863	3300027855	Soil	SRPSEDVLAVYDAHGWPQNQYLWRMTGRGGLQPSETPLITNLQKAFEQATAK
Ga0209693_105293012	3300027855	Soil	YEPNQADIVLMVTSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQQGESPLVTNLEKAFTLATTK
Ga0209169_100684301	3300027879	Soil	RPSEDVLAVYDAHGWPRDQYLWRMMGRSGLQTGETPLATSLEKAFDQAATK
Ga0209380_101812933	3300027889	Soil	YEPRQADVVLMVMSRPSEDVLAVYDAHGWPRDQYLWRMMGRSGLQTGETPLATSLEKAFDQATAK
Ga0209624_103025473	3300027895	Forest Soil	VLMVMSRPSEDVLAVYDAHGWPGDGQYLWRMMGRSGLQTGEAPLITNLEKAFEKATTEKAMKTK
Ga0209624_104776973	3300027895	Forest Soil	IVLMVTSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQQGESPLLTNLEKAFTLATTK
Ga0209006_112487582	3300027908	Forest Soil	TSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQQGESPLVTNLEKAFTLATTK
Ga0209526_101593291	3300028047	Forest Soil	EDVLAVYDAHGWPSDQYLWRMMGRSGLQQNETPFITDLEKAFEQATTKR
Ga0302225_101856443	3300028780	Palsa	RPSEDVLAVYDARGWPGNQYLWRMMGRGGLQPGETPLLTDLEKAFDQATAK
Ga0302278_103993081	3300028866	Bog	PREADIVLMVMSRPSEDVLALYDAHGWPDNVYLWRMMGRSGLQPSEAPFVTNLEKAFDQATAGK
Ga0222749_107834882	3300029636	Soil	VLMVTSRPSEDILAVYDAHGWPRDQYLWRMTSRSGLQQSETPLVTNLEKAFDQATNK
Ga0222748_10521733	3300029701	Soil	VVVYEPRQADVVLMVMSRPSEDVLAVYDAHGWPRDQYLWRMMGRSGLQTGETPLATSLEKAFDQAATK
Ga0311329_104320211	3300029907	Bog	KFTLVYEPNQADIVLMVMSRPSEDVLAVYDAHGWPQNQYLWRMMSRSGLQPSEAPLMLDMEKAFQKVAK
Ga0311361_105274384	3300029911	Bog	RPSEDILAVYDAHGWPQNQYLWRMMGRGGLQTNESPLVTNLEKAFEQATTK
Ga0302143_11083062	3300029918	Bog	FIIVYEPRQADIVMLVMSRPSEDVLAVYDGHGWGENSQYLWRMMGHGGLQAGESPFVTDLEKAFDQATVK
Ga0302143_11695321	3300029918	Bog	EPNQADIVLMVMSRPSEDVLAVYDAHGWPQNQYLWRMMSRSGLQPSEAPLMLDMEKAFQKVAK
Ga0311343_102103205	3300029953	Bog	MVTSRPSEDVLAVYDAHGWPQNQYLWRMMGRGGLQTNEAPLVTNLEKAFEQATTK
Ga0311338_120199872	3300030007	Palsa	RQADIVLMVMSRPSEDVLAVYDARGWPDNQYLWRMMGRGGLQPSETPLLTDLEKAFDQATAK
Ga0311344_104902704	3300030020	Bog	VTSRPSEDVLAVYDAHGWPQNQYLWRMMGRGGLQTNEAPLVTNLEKAFEQATTK
Ga0302281_101883353	3300030044	Fen	EDVLAVYDAHGWPQNQYLWRMMGRGGLQTNEAPLVTNLEKAFEQATTK
Ga0302176_103656821	3300030057	Palsa	RPSEDVLAVYDAHGWPGNQYLWRMMGRGGLEKSETPLLANLEKAFDRVTVGK
Ga0311355_118096401	3300030580	Palsa	TLVYQPGQADVVLMVTSRPTEDVLAVYDAHGWPGNSQYLWRMMGRNGLQTGETPMVTSLEKAFALATAAK
Ga0210270_13646242	3300030581	Soil	LVYEPHQADIVLMVTSRPSEDLLALYDAHGWPQNQYLWRMMGRGGLQPSEAPLVTNLEKAFEQATTK
Ga0307482_12489992	3300030730	Hardwood Forest Soil	GKFTLVYEPNQADIVLMVTSRPSEDILAVYDARGWPQNQYLWRMMGRSGLQPGESPLVTNLEKAFTLATTK
Ga0265460_109741401	3300030740	Soil	KFILVYEPRQADIVLMVTSRASEDVLAVYDAHSWPQNQYLWRMMGRSGLQPSEAPLVTNLEKAFDQATAK
Ga0265746_10051703	3300030815	Soil	ANQADIVLMVTSRPSEDILAIYDARGWPRDQYLWRMTGRSGLQQGEAPLVTNMESAFAQATKK
Ga0138301_14386672	3300031022	Soil	VVYEPGQADMVLMVTSRPTEDILAVYDAHGWPGNQYLWRMMGRSGLQQSEAPFVTNLEKAFEQAKAK
Ga0302325_128777661	3300031234	Palsa	WVVVYKPQEADVVLMVMSRPSEDVLAVYDSHGWPGDEFLWRVSAREGLQKNETPLFTQMRKAFEKAAAK
Ga0170818_1088227971	3300031474	Forest Soil	QADIVLMVTSRPSEDILAVYDAHGWPRNQYLWRMMGRSGLQPSEAPLVANLEKAFDRATT
Ga0302326_122272323	3300031525	Palsa	DIVLMVMSRPSEDVLAVYDSHGWPANSQYLWRMMGRNGLQEGEAPLVTNLEKAYQAAATK
Ga0310686_1051379663	3300031708	Soil	VYEPRQADVVLMVMSRPSEDVLAVYDAHGWPRDQYLWRMMGRSGLQTGETPLATSLEKAFDQATTK
Ga0310686_1146696194	3300031708	Soil	MVMSRPSEDVLAVYDAHGWPQNQYLWRMTGRSGLQPSESPLLTDLEKAFEQATAGK
Ga0307476_103903721	3300031715	Hardwood Forest Soil	VLMVMSRPSEDVLAVYDAHGWPANSQYLWRMTGRNGLQQGEAPLVTDLEQAFDQARATK
Ga0307474_100121611	3300031718	Hardwood Forest Soil	VYEPQQADIVLMVTSRPSEDVLAVYDAHGWPLDQYLWRMTSRNGLQQSETPLVTNLEKAFEHATSK
Ga0307477_104280971	3300031753	Hardwood Forest Soil	DVLAVYDAHGWPQNQYLWRMTGRSGLQPSEAPLITNLQKAFEQATAK
Ga0316046_1116111	3300031817	Soil	MVMSRPSEDILAVYDAHGWPGKSQYLWRMMGRSGLQPTEAPLVTNLEQAFEQATTNK
Ga0316033_1116121	3300031872	Soil	EPRQADIVLMVTSRASEDVLAVYDAHGWPQNQYLWRMMGRSGLQPSEAPLVTNLEKAFDQATAK
Ga0326631_1140601	3300032072	Soil	TLVYEPSQADIVLMVMSRPSEDVLAVYDAHGWPNNQYRWRMMGRSGLQASEAPLVTNLEAAFAKATNK
Ga0348332_143016461	3300032515	Plant Litter	RPSEDVLAVYDAHGWPQNQYLWRMTGRGGLQPSETPLITNLQKAFEQATAK
Ga0335083_107283681	3300032954	Soil	DVLAVYDAHGWPRNGMYLWRVMGANGLQLGEAPLVTDFLQAFERAAR
Ga0370483_0004411_43_210	3300034124	Untreated Peat Soil	MVTGRPSEDVLAVYDAHGWPRNEYLWRMVGHGGLQQGEAPLVTNLEKAFDLATAK
Ga0370515_0067058_1379_1549	3300034163	Untreated Peat Soil	MVTSQPTEDILAVYDAHGWPRNQYLWRMTGRGGLQPSESPLITNLEKAFDLVAAKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079688

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences