Metagenome Family F079639

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079639
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	43 residues
Representative Sequence	MKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSL
Number of Associated Samples	93
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.96 %
% of genes near scaffold ends (potentially truncated)	98.26 %
% of genes from short scaffolds (< 2000 bps)	97.39 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (62.609 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.956 % of family members)
Environment Ontology (ENVO)	Unclassified (46.957 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.00% β-sheet: 2.86% Coil/Unstructured: 87.14%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13550	Phage-tail_3	7.83
PF01183	Glyco_hydro_25	4.35
PF13565	HTH_32	0.87
PF05135	Phage_connect_1	0.87
PF13610	DDE_Tnp_IS240	0.87
PF11863	DUF3383	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	4.35

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
All Organisms	root	All Organisms	37.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
cellular organisms	root	All Organisms → cellular organisms	36.52 %
Viruses	superkingdom	All Organisms → Viruses	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.52 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.04 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.48 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	25.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.61 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.22 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.74 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	25.22 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	1.74 %
Rhizobium phage RHph_Y1_11	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Rhizobium phage RHph_Y1_11	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02HIF7U	Not Available	549	Open in IMG/M
3300004080\|Ga0062385_10185551	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300004080\|Ga0062385_10224850	Not Available	1030	Open in IMG/M
3300004092\|Ga0062389_100731928	Not Available	1165	Open in IMG/M
3300004092\|Ga0062389_101494445	Not Available	859	Open in IMG/M
3300005180\|Ga0066685_11136487	Not Available	509	Open in IMG/M
3300005444\|Ga0070694_100505952	Not Available	962	Open in IMG/M
3300005444\|Ga0070694_101376253	Not Available	595	Open in IMG/M
3300005552\|Ga0066701_10698404	Not Available	610	Open in IMG/M
3300005569\|Ga0066705_10715973	Not Available	602	Open in IMG/M
3300007258\|Ga0099793_10713891	Not Available	506	Open in IMG/M
3300009143\|Ga0099792_10274369	Not Available	991	Open in IMG/M
3300010043\|Ga0126380_12157085	Not Available	514	Open in IMG/M
3300010048\|Ga0126373_10307274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1584	Open in IMG/M
3300010335\|Ga0134063_10344304	Not Available	723	Open in IMG/M
3300010358\|Ga0126370_10729956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300010359\|Ga0126376_10292536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1411	Open in IMG/M
3300010359\|Ga0126376_10781202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300010360\|Ga0126372_11474421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300010361\|Ga0126378_10672661	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300010366\|Ga0126379_10268045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1693	Open in IMG/M
3300011269\|Ga0137392_11355147	Not Available	570	Open in IMG/M
3300012361\|Ga0137360_11762516	Not Available	525	Open in IMG/M
3300012582\|Ga0137358_11120003	Not Available	500	Open in IMG/M
3300012918\|Ga0137396_10195737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1485	Open in IMG/M
3300012922\|Ga0137394_11116844	Not Available	652	Open in IMG/M
3300012929\|Ga0137404_10809063	Not Available	851	Open in IMG/M
3300012948\|Ga0126375_11566579	Not Available	566	Open in IMG/M
3300015264\|Ga0137403_10270167	Not Available	1604	Open in IMG/M
3300016270\|Ga0182036_10376636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1100	Open in IMG/M
3300016294\|Ga0182041_11320012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300016319\|Ga0182033_10444243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300016404\|Ga0182037_10501260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300016404\|Ga0182037_11428481	Not Available	612	Open in IMG/M
3300016422\|Ga0182039_10374477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300016422\|Ga0182039_11988926	Not Available	534	Open in IMG/M
3300016445\|Ga0182038_10145182	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300016445\|Ga0182038_11628967	Not Available	581	Open in IMG/M
3300017924\|Ga0187820_1316225	Not Available	517	Open in IMG/M
3300020199\|Ga0179592_10344169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300020579\|Ga0210407_10759642	Not Available	749	Open in IMG/M
3300020579\|Ga0210407_10913349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300020580\|Ga0210403_10894565	Not Available	700	Open in IMG/M
3300020580\|Ga0210403_11039531	Not Available	639	Open in IMG/M
3300020580\|Ga0210403_11337997	Not Available	545	Open in IMG/M
3300020581\|Ga0210399_10800506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300021088\|Ga0210404_10451347	Not Available	723	Open in IMG/M
3300021171\|Ga0210405_10460480	Not Available	999	Open in IMG/M
3300021178\|Ga0210408_10304787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1270	Open in IMG/M
3300021361\|Ga0213872_10167451	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300021405\|Ga0210387_11172183	Not Available	668	Open in IMG/M
3300021407\|Ga0210383_10834120	Not Available	788	Open in IMG/M
3300021432\|Ga0210384_10465823	Not Available	1138	Open in IMG/M
3300021444\|Ga0213878_10411645	Not Available	589	Open in IMG/M
3300021475\|Ga0210392_11435588	Not Available	516	Open in IMG/M
3300021478\|Ga0210402_11253923	Not Available	668	Open in IMG/M
3300021559\|Ga0210409_10789158	Not Available	822	Open in IMG/M
3300021560\|Ga0126371_11153871	Not Available	913	Open in IMG/M
3300026361\|Ga0257176_1071347	Not Available	561	Open in IMG/M
3300027073\|Ga0208366_1006047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1213	Open in IMG/M
3300027521\|Ga0209524_1114239	Not Available	564	Open in IMG/M
3300027727\|Ga0209328_10000143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14910	Open in IMG/M
3300027824\|Ga0209040_10465047	Not Available	571	Open in IMG/M
3300027825\|Ga0209039_10007501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6948	Open in IMG/M
3300028536\|Ga0137415_11436344	Not Available	513	Open in IMG/M
3300031128\|Ga0170823_11369311	Not Available	609	Open in IMG/M
3300031543\|Ga0318516_10824830	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Rhizobium phage RHph_Y1_11	523	Open in IMG/M
3300031545\|Ga0318541_10087147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1660	Open in IMG/M
3300031545\|Ga0318541_10590728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	621	Open in IMG/M
3300031572\|Ga0318515_10274778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300031572\|Ga0318515_10275837	Not Available	902	Open in IMG/M
3300031573\|Ga0310915_10133802	Not Available	1704	Open in IMG/M
3300031573\|Ga0310915_10787344	Not Available	669	Open in IMG/M
3300031668\|Ga0318542_10365709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300031679\|Ga0318561_10517227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	657	Open in IMG/M
3300031679\|Ga0318561_10711833	Not Available	552	Open in IMG/M
3300031680\|Ga0318574_10641283	Not Available	623	Open in IMG/M
3300031718\|Ga0307474_11533953	Not Available	524	Open in IMG/M
3300031724\|Ga0318500_10357170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300031724\|Ga0318500_10572923	Not Available	571	Open in IMG/M
3300031736\|Ga0318501_10279676	Not Available	888	Open in IMG/M
3300031736\|Ga0318501_10344762	Not Available	800	Open in IMG/M
3300031744\|Ga0306918_10571391	Not Available	886	Open in IMG/M
3300031744\|Ga0306918_10714067	Not Available	784	Open in IMG/M
3300031748\|Ga0318492_10094705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1460	Open in IMG/M
3300031748\|Ga0318492_10282649	Not Available	861	Open in IMG/M
3300031753\|Ga0307477_10632698	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300031777\|Ga0318543_10376599	Not Available	636	Open in IMG/M
3300031793\|Ga0318548_10327995	Not Available	752	Open in IMG/M
3300031819\|Ga0318568_10893341	Not Available	550	Open in IMG/M
3300031832\|Ga0318499_10059895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1435	Open in IMG/M
3300031832\|Ga0318499_10385398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	537	Open in IMG/M
3300031835\|Ga0318517_10232856	Not Available	831	Open in IMG/M
3300031835\|Ga0318517_10492731	Not Available	552	Open in IMG/M
3300031859\|Ga0318527_10470594	Not Available	536	Open in IMG/M
3300031879\|Ga0306919_11164724	Not Available	586	Open in IMG/M
3300031879\|Ga0306919_11383003	Not Available	531	Open in IMG/M
3300031880\|Ga0318544_10391594	Not Available	540	Open in IMG/M
3300031890\|Ga0306925_11289207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	726	Open in IMG/M
3300031896\|Ga0318551_10489047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300031897\|Ga0318520_10501572	Not Available	749	Open in IMG/M
3300031941\|Ga0310912_10893970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300031942\|Ga0310916_10069695	Not Available	2747	Open in IMG/M
3300031947\|Ga0310909_10770363	Not Available	796	Open in IMG/M
3300031954\|Ga0306926_10366407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1781	Open in IMG/M
3300032008\|Ga0318562_10800241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300032035\|Ga0310911_10204493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1124	Open in IMG/M
3300032043\|Ga0318556_10238293	Not Available	949	Open in IMG/M
3300032060\|Ga0318505_10537230	Not Available	551	Open in IMG/M
3300032060\|Ga0318505_10611727	Not Available	512	Open in IMG/M
3300032065\|Ga0318513_10323442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300032068\|Ga0318553_10281783	Not Available	869	Open in IMG/M
3300032180\|Ga0307471_101537738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300032205\|Ga0307472_101783575	Not Available	610	Open in IMG/M
3300032261\|Ga0306920_100465608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1878	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.26%
Host-Associated	Host-Associated	0.87%
Engineered	Engineered	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.17%
Aquatic	Environmental → Aquatic	6.09%
Plants	Host-Associated → Plants	0.87%
Solid Waste	Engineered → Solid Waste	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.17%
Freshwater	Environmental → Aquatic → Freshwater	6.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%
Grass	Engineered → Solid Waste → Grass	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.09%
Loam	Environmental → Terrestrial → Soil → Loam	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%
Composting	Engineered → Solid Waste → Grass → Composting	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_03169150	2170459014	Switchgrass, Maize And Mischanthus Litter	VPEVKLESWHSAEDKRRWKIVRTDDYSDVPGEIITA
Ga0062385_101855511	3300004080	Bog Forest Soil	LKLESWHSSDDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHVGGETKTL
Ga0062385_102248504	3300004080	Bog Forest Soil	MKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHVGGETKTL
Ga0062389_1007319282	3300004092	Bog Forest Soil	MKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHVGGE
Ga0062389_1014944451	3300004092	Bog Forest Soil	MIKLESWHSSDDKRRWKIVRTDSYIDVPGEIVTADEVSGECSMFVDGETK
Ga0066685_111364871	3300005180	Soil	MKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSVHVGDETKTLS
Ga0070694_1005059521	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKLESWHSAEDKRRWKIVRTDNYGDVPGEIITADEATGECCVQVGGETK
Ga0070694_1013762531	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSVH
Ga0066701_106984041	3300005552	Soil	VKLESWHSSEDKRRWKIVRTDTYTDVAGEIVTADETTGECS
Ga0066705_107159731	3300005569	Soil	MKLESWHSTEDKRRWKIVRTDNYTDVPGEIITADEATGECCIQVGGE
Ga0099793_107138913	3300007258	Vadose Zone Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETT
Ga0099792_102743692	3300009143	Vadose Zone Soil	MKLESWHTAEDKAKWKLVRTDNYTDVPGDIVTADEISG*
Ga0126380_121570852	3300010043	Tropical Forest Soil	VKLESWHSSEDKARWKIVRTENYTDVPGEIVTADETTGECSVH
Ga0126373_103072741	3300010048	Tropical Forest Soil	MKLESWHNAEEKRRWKIVRTDTYTDVAGEIITADEATGECCIQVGGETKSLS
Ga0134063_103443043	3300010335	Grasslands Soil	MLEPTKPMKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGE
Ga0126370_107299561	3300010358	Tropical Forest Soil	MKLESWHSTEDKRRWKLVRTDDYSDVPGDIITADEAT
Ga0126376_102925361	3300010359	Tropical Forest Soil	MKLESWHSTEDKRRWKLVRTDDYSDVPGDIITADEATG
Ga0126376_107812021	3300010359	Tropical Forest Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSL
Ga0126372_114744211	3300010360	Tropical Forest Soil	MKLESWHSAEDKQRWKIVRTDDYTDVPGEIVAADEATGECSIQ
Ga0126378_106726613	3300010361	Tropical Forest Soil	MKLEAWHSTEDKRHWKIVRTDNYTDVPGEIITADESTGECCIQVGGE
Ga0126379_102680452	3300010366	Tropical Forest Soil	MKLESWHSTEDKRRWKIVRTDNYTDVPGEIITADEATGEC
Ga0137392_113551472	3300011269	Vadose Zone Soil	VKLESWHSSEDKRRWKIVRTDTYTDVAGEIVTADE
Ga0137360_117625161	3300012361	Vadose Zone Soil	VKLESWHSSEDKCRWKIVRTDNYTDVPGEIVTADE
Ga0137358_111200031	3300012582	Vadose Zone Soil	MLEPTKPMKLESWHSSEDKRRWKIVRTDSYRDVEGE
Ga0137396_101957372	3300012918	Vadose Zone Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADE
Ga0137394_111168442	3300012922	Vadose Zone Soil	VKLESWHSGEDKRRWKIVRTDNYTDVPGEIVTADETTGECSVHVGGET
Ga0137404_108090631	3300012929	Vadose Zone Soil	LIVHGLFDDWMLEPTKPMKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSVHVG
Ga0126375_115665791	3300012948	Tropical Forest Soil	MKLESWHSADDKRRWKIVRTDNYTDFPGEIITADEATGECCLQVGGETKT
Ga0137403_102701671	3300015264	Vadose Zone Soil	MKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSGMSATRR
Ga0182036_103766362	3300016270	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADEM
Ga0182041_113200121	3300016294	Soil	MKLESWHSTEDKRRWKIVRTDDYSDVAGEIITADEA
Ga0182033_104442432	3300016319	Soil	MKLESWHSSDDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHVGGETK
Ga0182037_105012601	3300016404	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGEIITADETTGECCVHIGGETKALS
Ga0182037_114284811	3300016404	Soil	MKLESWHSAEDKKRWKIVRTDNYTDVPGEIITADEATGECC
Ga0182039_103744771	3300016422	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADEMTGECS
Ga0182039_119889262	3300016422	Soil	VKLESFHSAEEKARWKIVRTDTFVDVPGDIVTADEVTGECSMHNNGE
Ga0182038_101451821	3300016445	Soil	VKLESWHSSKEKRRWKIVRTDNYTDVAGEIVTADETTGECS
Ga0182038_116289671	3300016445	Soil	MKLESWHSTEDKRRWKIVRTDNYTDVPGEIITADEATGECCIQVGGETKTLS
Ga0187820_13162252	3300017924	Freshwater Sediment	MKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSL
Ga0179592_103441691	3300020199	Vadose Zone Soil	MKLESWHSTEDKRRWKVVRTDDYTDVPGDIVTADEA
Ga0210407_107596422	3300020579	Soil	MLEPMKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVT
Ga0210407_109133491	3300020579	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSVHVGGETK
Ga0210403_108945652	3300020580	Soil	MKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSVHVGD
Ga0210403_110395311	3300020580	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGEIITADEATGECCIQVS
Ga0210403_113379972	3300020580	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVTGEIITADEATGECCIQVGGETKTL
Ga0210399_108005061	3300020581	Soil	LKLESWHSSEDKHRWKIVRTDNYTDVPGEIVTADETTG
Ga0210404_104513471	3300021088	Soil	MLEPMKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSVHVGD
Ga0210405_104604804	3300021171	Soil	MLEPMKLESWHSSEDKRRWKIVRTDSYRDVEGEIFTADEVT
Ga0210408_103047873	3300021178	Soil	MKLESWHSTEDKRRWKIVRTDNYADVPGEIITADEVTGECCIQVGGE
Ga0213872_101674513	3300021361	Rhizosphere	MKLESWHSSEDKRRWKIVRTDNYTDVPGEILTADEATG
Ga0210387_111721832	3300021405	Soil	MKLESWHSTEDKRRWKIVRTDDYSDVAGEIITADEATGECCIQVGVKPKR
Ga0210383_108341201	3300021407	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADESTGECSLHVGGETKTL
Ga0210384_104658231	3300021432	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGDIITADEAT
Ga0213878_104116451	3300021444	Bulk Soil	MKLESWHSSEDKRRWKIVRTDNYTDVPGEILTADEATGECSLQIA
Ga0210392_114355881	3300021475	Soil	MSWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSVHVGD
Ga0210402_112539231	3300021478	Soil	VKLESWHSSEDKRRWKIVRTDNYTDIAGEIVTADETTGECSIHV
Ga0210409_107891582	3300021559	Soil	MKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADETTGEC
Ga0126371_111538712	3300021560	Tropical Forest Soil	MKLDSYQSADDKRRWKIVRTDSYTDVPGEIISADE
Ga0257176_10713472	3300026361	Soil	MKLESWHSTEDKRRWKVVRTDDYTDVPGDIVTADEATGECCVHV
Ga0208366_10060472	3300027073	Forest Soil	MKLESWHCTEDKRRWKIVRTDDYTDVAGEIITADEATGE
Ga0209524_11142391	3300027521	Forest Soil	MKLESWHCTEDKRRWKIVRTDDYTDVAGEIITADEATGECCI
Ga0209328_100001431	3300027727	Forest Soil	VKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGEC
Ga0209040_104650471	3300027824	Bog Forest Soil	MKIESWNTSDEKRRYKIIRTDNYTDVPGEIITADEATGECC
Ga0209039_100075011	3300027825	Bog Forest Soil	MIKLESWHSSDDKRRWKVVRTDLYVDVPGEIVSADEAS
Ga0137415_114363442	3300028536	Vadose Zone Soil	MKLESWHSTEDKRRWKIVRTDDYTDVPGEIITADETTGECCL
Ga0170823_113693111	3300031128	Forest Soil	MLEPTKPIKLESWHSSEDKKRWKIVRTDSYAEVPGEIVTADETTGE
Ga0318516_108248301	3300031543	Soil	MKLEAWHSSEDKRRWKIVRTDNYTDVPGEIVTADEATGECSLHVAG
Ga0318541_100871472	3300031545	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADEMTGECS
Ga0318541_105907282	3300031545	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADET
Ga0318515_102747781	3300031572	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGEIITADET
Ga0318515_102758372	3300031572	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADEMTG
Ga0310915_101338022	3300031573	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGEIITADETTGECCVHIGGETKAL
Ga0310915_107873442	3300031573	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADELTGECSLHVGGETKTLS
Ga0318542_103657092	3300031668	Soil	VKLESWHSSEDKRRWKIMRTDNYTDVAGEIVTADESTGEC
Ga0318561_105172272	3300031679	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHVGGETKT
Ga0318561_107118332	3300031679	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHVGGEPK
Ga0318574_106412832	3300031680	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADELTGE
Ga0307474_115339532	3300031718	Hardwood Forest Soil	MKLESWHCTEDKRRWKIVRTDDYTDVAGEIIMADEATGECCIQVGG
Ga0318500_103571702	3300031724	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHV
Ga0318500_105729232	3300031724	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADEMTGECSLHVAGETK
Ga0318501_102796762	3300031736	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADELTGEC
Ga0318501_103447621	3300031736	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGEIITADETTGECC
Ga0306918_105713911	3300031744	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADELTGECSLHVGGETQTL
Ga0306918_107140671	3300031744	Soil	MKLESWHSAEEKHRWKIVRTDTYTDVVGEIITADEATGECCIQVGG
Ga0318492_100947054	3300031748	Soil	MKLESYQSSEDKRHWKIVRTDHFTDVEGEIITADETTGECAV
Ga0318492_102826493	3300031748	Soil	MKIESWSSSEDKRRWKIVRTDNYTDVPGEIVCADEVTGE
Ga0307477_106326982	3300031753	Hardwood Forest Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGDIITADEATGECCIQVGGETKTL
Ga0318543_103765991	3300031777	Soil	LKLESWHSSEDKRRWKIVRTDTYTDVPGEIVTADETTGECSLHV
Ga0318548_103279952	3300031793	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADELTGECS
Ga0318568_108933411	3300031819	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETT
Ga0318499_100598952	3300031832	Soil	LKLESWHSSEDKRRWKIVRTDNYADVPGEIVTADETTGECSLHVGG
Ga0318499_103853982	3300031832	Soil	MKIESWSSSEDKRRWKIVRTDNYTDVPGEIVCADEVTGECSLHVGGETK
Ga0318517_102328562	3300031835	Soil	LKLESWHSSEDKRRWKIVRTDTYTDVPGEIVTADETTGECSLHVG
Ga0318517_104927311	3300031835	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADE
Ga0318527_104705941	3300031859	Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADELTGECSLHVGGETKT
Ga0306919_111647241	3300031879	Soil	MKLESWHSAEEKHRWKIVRTDTYTDVVGEIITADEATGECCIQVG
Ga0306919_113830031	3300031879	Soil	VKLESWHSSEDKRRWKIMRTDNYTDVAGEIVTADETTGE
Ga0318544_103915941	3300031880	Soil	MKLESWHSAADKARWKIARRDNCTDVPGEIVDADEASGDCT
Ga0306925_112892072	3300031890	Soil	LKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSLHVG
Ga0318551_104890471	3300031896	Soil	MKLESWHSTEDKRRWKIVRTDDYTDVAGEIITADETTGECCVH
Ga0318520_105015721	3300031897	Soil	MKLESWHSAEDKKRWKIVRTDNYTDVPGEIITADEATG
Ga0310912_108939701	3300031941	Soil	MKLESWHSSEDKRRWKIVRTDSYADVEGEIVTADE
Ga0310916_100696951	3300031942	Soil	MKLESWHSAADKARWKIARRDNCTDVPGEIVDADEASGDC
Ga0310909_107703631	3300031947	Soil	MKLESWHSSDDKRRWKIVRTDNYTDVPGEIVTADETT
Ga0306926_103664071	3300031954	Soil	LKLESWHSSEDKHRWKIVRTDNYTDVPGEIVTADETT
Ga0318562_108002412	3300032008	Soil	MKLESYQSSEDKRHWKIVRTDHFTDVEGEIITADETTGEC
Ga0310911_102044933	3300032035	Soil	MKLESWHSAEDKRRWKIVRTDNYSDVPGEIITADEATGECCLQVGSET
Ga0318556_102382931	3300032043	Soil	MKLESWHSAADKARWKIARRDNCTDVPGEIVDADEAS
Ga0318505_105372301	3300032060	Soil	MKLESWHSTEDKRRWKIVRTDNYSDAPGEIITADEATGECCL
Ga0318505_106117272	3300032060	Soil	MKLESWHSTEDKRRWKIVRTDNYTDVPGEIITADEATGE
Ga0318513_103234421	3300032065	Soil	MKLESYQSSEDKRHWKIVRTDHFTDVEGEIITADETTGECAVQVGNE
Ga0318553_102817831	3300032068	Soil	LKLESWHSSDDKRRWKIVRTDNYTDVPGEIVTADETTGE
Ga0307471_1015377381	3300032180	Hardwood Forest Soil	VKLESWHSSEDKRRWKIVRTDNYTDVPGEIVTADETTGECSVHVGG
Ga0307472_1017835751	3300032205	Hardwood Forest Soil	MKLESWHSSEDKRRWKIVRTDSYRDVEGEIITADEVTGECSVHVGDETKAL
Ga0306920_1004656082	3300032261	Soil	MDHHGNYEMKLESWHSTEDKRRWKIVRTDDYTDVAGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079639

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences