Metagenome / Metatranscriptome Family F079609

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079609
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	73 residues
Representative Sequence	MFTFRTRRRRWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDL
Number of Associated Samples	104
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.09 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.43 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.304 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.696 % of family members)
Environment Ontology (ENVO)	Unclassified (33.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.913 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 63.73% β-sheet: 0.00% Coil/Unstructured: 36.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF03466	LysR_substrate	3.48
PF05598	DUF772	2.61
PF12833	HTH_18	2.61
PF00106	adh_short	1.74
PF00196	GerE	1.74
PF13683	rve_3	1.74
PF12840	HTH_20	1.74
PF12697	Abhydrolase_6	1.74
PF04235	DUF418	1.74
PF06745	ATPase	0.87
PF00326	Peptidase_S9	0.87
PF02321	OEP	0.87
PF01965	DJ-1_PfpI	0.87
PF11749	DUF3305	0.87
PF03577	Peptidase_C69	0.87
PF10282	Lactonase	0.87
PF08974	DUF1877	0.87
PF14280	DUF4365	0.87
PF00753	Lactamase_B	0.87
PF04116	FA_hydroxylase	0.87
PF00857	Isochorismatase	0.87
PF02899	Phage_int_SAM_1	0.87
PF13577	SnoaL_4	0.87
PF02417	Chromate_transp	0.87
PF04393	DUF535	0.87
PF00563	EAL	0.87
PF01850	PIN	0.87
PF00589	Phage_integrase	0.87
PF08327	AHSA1	0.87
PF02080	TrkA_C	0.87
PF02469	Fasciclin	0.87
PF04820	Trp_halogenase	0.87
PF05239	PRC	0.87
PF13426	PAS_9	0.87
PF00149	Metallophos	0.87
PF13418	Kelch_4	0.87
PF00891	Methyltransf_2	0.87
PF00756	Esterase	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.74
COG2311	Uncharacterized membrane protein YeiB	Function unknown [S]	1.74
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.87
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.87
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.87
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	0.87
COG2990	Outer membrane protein VirK/YbjX involved in antimicrobial peptide resistance, DUF535 family	Function unknown [S]	0.87
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.87
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.87
COG4690	Dipeptidase	Amino acid transport and metabolism [E]	0.87
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.87
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.87
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.87
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.30 %
Unclassified	root	N/A	48.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.48 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.61 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.87 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.61 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.87 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.61 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.61 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	0.87 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.87 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.70 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
Cupriavidus sp. YR651	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. YR651	0.87 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.87 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10335765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	932	Open in IMG/M
3300001593\|JGI12635J15846_10351733	Not Available	903	Open in IMG/M
3300003220\|JGI26342J46808_1031750	Not Available	531	Open in IMG/M
3300004633\|Ga0066395_10993412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300005602\|Ga0070762_10741196	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005610\|Ga0070763_10560126	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005712\|Ga0070764_10715897	Not Available	618	Open in IMG/M
3300005764\|Ga0066903_103781747	Not Available	813	Open in IMG/M
3300005921\|Ga0070766_10974104	Not Available	583	Open in IMG/M
3300005993\|Ga0080027_10115320	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300006102\|Ga0075015_100018771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3030	Open in IMG/M
3300006162\|Ga0075030_101144348	Not Available	612	Open in IMG/M
3300007788\|Ga0099795_10395826	Not Available	627	Open in IMG/M
3300009500\|Ga0116229_11387622	Not Available	557	Open in IMG/M
3300009662\|Ga0105856_1270962	Not Available	558	Open in IMG/M
3300009697\|Ga0116231_10482998	Not Available	679	Open in IMG/M
3300009701\|Ga0116228_10531184	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300009787\|Ga0116226_10669514	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300009787\|Ga0116226_11511552	Not Available	623	Open in IMG/M
3300010341\|Ga0074045_10200541	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337	Open in IMG/M
3300010373\|Ga0134128_12505603	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010379\|Ga0136449_100027124	All Organisms → cellular organisms → Bacteria → Proteobacteria	14091	Open in IMG/M
3300010880\|Ga0126350_11855642	Not Available	564	Open in IMG/M
3300012205\|Ga0137362_11326841	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300012362\|Ga0137361_10244928	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300012918\|Ga0137396_10992485	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300012924\|Ga0137413_11809147	Not Available	504	Open in IMG/M
3300012925\|Ga0137419_10549964	Not Available	922	Open in IMG/M
3300012930\|Ga0137407_10827584	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300012971\|Ga0126369_13558254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	510	Open in IMG/M
3300013296\|Ga0157374_11879522	Not Available	624	Open in IMG/M
3300014167\|Ga0181528_10045610	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2439	Open in IMG/M
3300014200\|Ga0181526_10140577	Not Available	1547	Open in IMG/M
3300014201\|Ga0181537_10720463	Not Available	678	Open in IMG/M
3300016294\|Ga0182041_10365008	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300016341\|Ga0182035_10442527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1100	Open in IMG/M
3300016357\|Ga0182032_10929307	Not Available	740	Open in IMG/M
3300017973\|Ga0187780_10155737	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300017993\|Ga0187823_10037991	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1284	Open in IMG/M
3300019886\|Ga0193727_1048104	Not Available	1387	Open in IMG/M
3300019887\|Ga0193729_1055200	All Organisms → cellular organisms → Bacteria → Acidobacteria	1603	Open in IMG/M
3300020579\|Ga0210407_11303336	Not Available	542	Open in IMG/M
3300020580\|Ga0210403_10126640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2081	Open in IMG/M
3300020580\|Ga0210403_10427504	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300020581\|Ga0210399_10094870	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300020583\|Ga0210401_11632330	Not Available	502	Open in IMG/M
3300021170\|Ga0210400_10301432	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300021180\|Ga0210396_10364484	Not Available	1273	Open in IMG/M
3300021181\|Ga0210388_10222583	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300021401\|Ga0210393_10187175	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300021401\|Ga0210393_11180618	Not Available	616	Open in IMG/M
3300021402\|Ga0210385_10734147	Not Available	756	Open in IMG/M
3300021402\|Ga0210385_10995879	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300021407\|Ga0210383_11361774	Not Available	591	Open in IMG/M
3300021420\|Ga0210394_10447012	Not Available	1137	Open in IMG/M
3300021432\|Ga0210384_11054142	Not Available	715	Open in IMG/M
3300021433\|Ga0210391_10594818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	868	Open in IMG/M
3300021433\|Ga0210391_10749233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	764	Open in IMG/M
3300021475\|Ga0210392_10955252	Not Available	641	Open in IMG/M
3300021477\|Ga0210398_11079830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	638	Open in IMG/M
3300021478\|Ga0210402_10768362	Not Available	888	Open in IMG/M
3300021478\|Ga0210402_10994856	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300021479\|Ga0210410_10129455	Not Available	2242	Open in IMG/M
3300021479\|Ga0210410_10585920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300021560\|Ga0126371_10728242	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300025463\|Ga0208193_1018483	Not Available	1929	Open in IMG/M
3300025527\|Ga0208714_1062937	Not Available	781	Open in IMG/M
3300025612\|Ga0208691_1105858	Not Available	634	Open in IMG/M
3300025916\|Ga0207663_10437713	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300025916\|Ga0207663_10968633	All Organisms → cellular organisms → Bacteria → Proteobacteria	682	Open in IMG/M
3300026041\|Ga0207639_11384255	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300026557\|Ga0179587_10201797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300027439\|Ga0209332_1010938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. YR651	1818	Open in IMG/M
3300027559\|Ga0209222_1004717	All Organisms → cellular organisms → Bacteria	2974	Open in IMG/M
3300027609\|Ga0209221_1045804	Not Available	1162	Open in IMG/M
3300027629\|Ga0209422_1106663	Not Available	645	Open in IMG/M
3300027701\|Ga0209447_10025607	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1650	Open in IMG/M
3300027729\|Ga0209248_10123275	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300027860\|Ga0209611_10185135	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300027879\|Ga0209169_10308434	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300027895\|Ga0209624_10031275	All Organisms → cellular organisms → Bacteria → Proteobacteria	3383	Open in IMG/M
3300028047\|Ga0209526_10067815	All Organisms → cellular organisms → Bacteria → Proteobacteria	2509	Open in IMG/M
3300028047\|Ga0209526_10631039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300028773\|Ga0302234_10257966	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300029913\|Ga0311362_10409865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1320	Open in IMG/M
3300030007\|Ga0311338_11262651	Not Available	696	Open in IMG/M
3300030503\|Ga0311370_10266483	Not Available	2244	Open in IMG/M
3300030503\|Ga0311370_12410039	Not Available	509	Open in IMG/M
3300030520\|Ga0311372_11757848	Not Available	743	Open in IMG/M
3300030618\|Ga0311354_10222952	Not Available	1999	Open in IMG/M
3300030862\|Ga0265753_1131457	Not Available	531	Open in IMG/M
3300030906\|Ga0302314_11734121	Not Available	550	Open in IMG/M
3300031128\|Ga0170823_12180128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	530	Open in IMG/M
3300031234\|Ga0302325_11607305	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300031544\|Ga0318534_10497637	Not Available	696	Open in IMG/M
3300031679\|Ga0318561_10072001	Not Available	1773	Open in IMG/M
3300031708\|Ga0310686_100807494	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300031718\|Ga0307474_11426611	Not Available	545	Open in IMG/M
3300031720\|Ga0307469_10154558	Not Available	1723	Open in IMG/M
3300031753\|Ga0307477_10643565	Not Available	712	Open in IMG/M
3300031771\|Ga0318546_10483676	Not Available	868	Open in IMG/M
3300031781\|Ga0318547_10708530	Not Available	626	Open in IMG/M
3300031792\|Ga0318529_10283060	Not Available	772	Open in IMG/M
3300031820\|Ga0307473_11311335	Not Available	542	Open in IMG/M
3300031833\|Ga0310917_10516726	Not Available	812	Open in IMG/M
3300031890\|Ga0306925_10240005	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300031893\|Ga0318536_10189359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1048	Open in IMG/M
3300031912\|Ga0306921_11171739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	857	Open in IMG/M
3300031945\|Ga0310913_10059771	Not Available	2508	Open in IMG/M
3300032001\|Ga0306922_10652377	Not Available	1111	Open in IMG/M
3300032059\|Ga0318533_10592291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300032091\|Ga0318577_10060601	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300032205\|Ga0307472_101573321	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300032897\|Ga0335071_11443872	Not Available	632	Open in IMG/M
3300034199\|Ga0370514_118546	Not Available	678	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.04%
Host-Associated	Host-Associated	6.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.48%
Aquatic	Environmental → Aquatic	9.57%
Plants	Host-Associated → Plants	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.65%
Freshwater	Environmental → Aquatic → Freshwater	7.83%
Peat	Environmental → Terrestrial → Peat	7.83%
Peat Moss	Host-Associated → Plants → Peat Moss	5.22%
Sediment	Environmental → Aquatic → Sediment	1.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.78%
Loam	Environmental → Terrestrial → Soil → Loam	15.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.83%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.22%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.22%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	5.22%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.96%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.22%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	5.22%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.87%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.87%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.87%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.87%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.87%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.87%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103357652	3300001593	Forest Soil	MFAFRIRGRRWWLGAIATALVAGVAAPLLRSTLEHAVRARIESAAVRHGAIARIGLVHIGVWPLLRLEEFDLDLG
JGI12635J15846_103517332	3300001593	Forest Soil	MFTFRTRRRWWWLGAITTALAVSVAAVLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVW
JGI26342J46808_10317501	3300003220	Bog Forest Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRPMLEHAVRARIESAAVRHGAVARIGLVHVGVW
Ga0066395_109934121	3300004633	Tropical Forest Soil	MLTFRTRARRLWLGTLAAALSVSVAALLLRPKLEEAVRARIESAAVRHGVVARIGLVHVGVWPL
Ga0070762_107411961	3300005602	Soil	MLTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFDL
Ga0070763_105601261	3300005610	Soil	MFAFLIRGRRWWLGAIAIALVASVAAMLLRPTLERAVRARIESAAVRHDAVARIALVHIGVWPLLRLEGFDLDFGHGE
Ga0070764_107158971	3300005712	Soil	MFTFRIRGRRWWLGAIATALVVSVAALLVRPRLEHEVQARIESAAVRHGAVARIGVVHVGVWPLLR
Ga0066903_1037817471	3300005764	Tropical Forest Soil	MLTFRNRGRMWWLGAIAAALLVSVSALLLRPKLEEAVRARIESAAVRHGVVARIGLVHVGVWPLL
Ga0070766_109741042	3300005921	Soil	MFTFRTRLRRWWLVAIASALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLD
Ga0080027_101153202	3300005993	Prmafrost Soil	MFTFRTRRRWWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDLRYGVR
Ga0075015_1000187717	3300006102	Watersheds	MARRSPGGARSGCGMLASMFKFRIRGRRWWLGAIAAALFASLAALMLRSTFEHAVRARIEAAAVHHGMVAGIGRVHVGVWPLLRLEGFDLDLRS
Ga0075030_1011443481	3300006162	Watersheds	MPTFRTRRRRWWLGAITTALAVSLTALLLRPMLEHRVRAQIESAALRHGAVARIGVVHVG
Ga0099795_103958261	3300007788	Vadose Zone Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLSPMLEHAVRARIESAAVRHGAVARIGLIHVGVWPLLRLE
Ga0116229_113876221	3300009500	Host-Associated	MRIRGRRWWLGAIATALVASVAAPLLRSTLEHTVRARIESVAVRHGAIARIGVVHIGAWPLLRLEAFDL
Ga0105856_12709622	3300009662	Permafrost Soil	MFAFRIRGRRWWLGAIATALVASVAALLLRSTLERAVRARIEAAAVRHDTVARIGLVHIGVWPLLRLEGFDLDLGHGVRL
Ga0116231_104829981	3300009697	Host-Associated	MFAFRIRGRRWWLGAIAFALIVSAAVPLLRSTLEHAIRARIESAAIRHGAIARIGRVHIGVWPLLRL
Ga0116228_105311842	3300009701	Host-Associated	MFAFRIRGRRWWLGAIATTLIASVAAPLLRSTLEHAVRARIESAAVRHGAIARIGLVHIGVWPFLRLEDFDLDLRYGLRVHADMIAATWPGRLR
Ga0116226_106695143	3300009787	Host-Associated	MFAVRIRGRRWWLGAIATALVASVAALLLGSTLEHAVRARIEAAAVRRGAVARIGLVHLGVWPLLRLEQLDLDLKSGLRLHADMIAATWP
Ga0116226_115115521	3300009787	Host-Associated	MSTFRTHRRRWWLGAIATALVVSLGTLLLSSMLERALRARIESAAVRHGVVARIGLVRVGVWPLLRLEGVDL
Ga0074045_102005411	3300010341	Bog Forest Soil	MFTFRTRRRQWWLGAIATALVVSLAALLLRSMLEHGVRARIASAAVRHGVVARIGLVHVGVWPLLRLEGFDLDL
Ga0134128_125056031	3300010373	Terrestrial Soil	MITFQTRGRRWWLGGVIAAALVVSLAAMLLRPMLEHTVRARIESAILRHGMAARIGLVHVGLWPLLRLEGFDLDLGHGAQLHADVITATWPGHLR
Ga0136449_1000271241	3300010379	Peatlands Soil	MFTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDLGD
Ga0126350_118556422	3300010880	Boreal Forest Soil	MFTFRTRRRPWWLVAIATALVVSLAALFLSSMLEHAVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDFGHGVQLHAAM
Ga0137362_113268412	3300012205	Vadose Zone Soil	MFTFRTRRRRWWLGAITTALVVSLAALLLRPVLEHGVRARIESEAVRHGAVARIGVVHVGVWPLL
Ga0137361_102449281	3300012362	Vadose Zone Soil	MFTFRTRRRRWWLGAIATALVVCLAALLLSPMLEQAVRARIESAAVRHGAVARIGLVHVGVWPLLRLDGF
Ga0137396_109924852	3300012918	Vadose Zone Soil	MFTFRTRRRRWWLGAIATALVVSLAVLLLSPMLEHAVRARIESAAVRHGVVARIGLVHIGVWPLLRL
Ga0137413_118091471	3300012924	Vadose Zone Soil	MFTFLTRRRRWWLGAIATALVVSLAALLLRSMLEHAVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDL
Ga0137419_105499641	3300012925	Vadose Zone Soil	MFTFRTRRRGWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGAVHVGVWPLLRLEGFDLDLGHG
Ga0137407_108275841	3300012930	Vadose Zone Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRSMLEHAVRARIESAAVRHGVVARIGLVHIGVWPLLRLEGFDLDLGHGVR
Ga0126369_135582541	3300012971	Tropical Forest Soil	MWWLGAIAAALFVSVAALLLRPKLEEAVRARIESAAVRHGVVARIGLVHVGVWPLL
Ga0157374_118795221	3300013296	Miscanthus Rhizosphere	MLAPMVTFRTPGPRWWLGAIGTALVVSLAAVLLRSMLEQAVRARIESATVRHGVVARIGLVHVSVWPLLRLEGCDFDLGHGARLHADMIAARWPGRLRLTI
Ga0181528_100456104	3300014167	Bog	MFKCRTRRRRWWLGAIATALVVCLAALFLRSMLEHDVRARIESAAVRHGAVARIGVVQVGVWPLLQLEG
Ga0181526_101405773	3300014200	Bog	MFTFRTRRRQWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVW
Ga0181537_107204631	3300014201	Bog	MVTFRTRRRRWLGAIATALVVSVAALLLRPMLEHGVRTRIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDFGHGVQLHADMI
Ga0182041_103650081	3300016294	Soil	MLTFRTRARMWWLGTIAAALFVSVAALWLRPKLEEAVRARIESAAVRHGVVARIGLVHVGVWPLLRLEAFDLDLAHGVQ
Ga0182035_104425271	3300016341	Soil	MLMFRTRARMWWLGTIAAALFVSVAALWLRPKLEEAVRARIESAAVRHGVVARIGLVHVGVWPWLRLEA
Ga0182032_109293071	3300016357	Soil	MWWFGAIAAALFASVAALLLRPKLEEAVRARIESAAARHGVVARIGLVHVGVWPLLR
Ga0187780_101557371	3300017973	Tropical Peatland	MLTFRNRGRMWWLGAIAAALFVSVAALLLRPKLEEAVRARIESAAVRHGVVARIGLVHVGVWPLLRLEAFDLDLGHGVRFH
Ga0187823_100379912	3300017993	Freshwater Sediment	MVTFRTRGLGGAIATALVVSLAALLLRPMLEHAVRARVESAAVRHGVVARIGLVHVGVWPLLRLEGFDLDLGHGLR
Ga0193727_10481041	3300019886	Soil	MFTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESEAVRHGAVAQIGVVHVGVW
Ga0193729_10552001	3300019887	Soil	MFTFRTRRRRWWLGAIATALVVSVAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDL
Ga0210407_113033361	3300020579	Soil	MFTFRTRRRRWWVGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLE
Ga0210403_101266401	3300020580	Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGLDL
Ga0210403_104275041	3300020580	Soil	MFAFRTRRRRWWLGAIATALIVILAAPLLRSKLEHAVRARIESAAVRHGAIARIGLVHIGVWPLLRLEG
Ga0210399_100948706	3300020581	Soil	MFTFRTRRRRWWLGAIATALVVSVAALLLRSILEHAVRARIESAAMRHGVVARIGVIHVGVWPLLRLQGFDL
Ga0210401_116323301	3300020583	Soil	MFKFRTRRGRWWLGAITTGLVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGEVHVGVWPLLRLEGFDLDLGHGVQL
Ga0210400_103014321	3300021170	Soil	MFTFRTRRRWWWLGAIATALVVSLATLPLRSMLEHEMRVRIVSAAVRHGAVARIGVVHVGVWPLLRLEGFDLDLGHGVQLHADMIAATWPG
Ga0210396_103644841	3300021180	Soil	MLTFRTRRRRWWLGAITAALAVILAALWLRPMLERGVRARIESEAVRHGAVARIGVVHVGVWPL
Ga0210388_102225833	3300021181	Soil	VAIATALVVGVAALLLRSTLERAVRARIESGAVRHGAVARIGVVHIGAWPLLQLEGFDLDLRSGVQLHADMIAATWPGRL
Ga0210393_101871751	3300021401	Soil	MFAFRIRGRRWWLGAIATALVAGVAAPLLRSTLEHAVRARIESAAVRHGAIARIGLVHIGVWPLLRLEEFDLDLGHGLRVHADMIAATWPEIG
Ga0210393_111806182	3300021401	Soil	MFTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDL
Ga0210385_107341471	3300021402	Soil	MFTFRTRRRWWWLGAIATALVVSLATLPLRSMLEHEMRVRIVSAAARHGAVARIGVVHVGVWPLLRLEGFDLDLGHG
Ga0210385_109958792	3300021402	Soil	MFTFRIRRRRWWLGAIATALVVSLAGLLLRPMLDHGVRARIESAAVRHGAVARIGLVHVGVWPLLRLEGFDLEL
Ga0210383_113617742	3300021407	Soil	MFAFRIRGRRWWLGAIATALVAGVAAPLLRSTLEHAVRARIESAAVRHGAIARIGLVHIGVWPLLRLEEFDLDLGHGLRVHADMI
Ga0210394_104470122	3300021420	Soil	MFTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLR
Ga0210384_110541421	3300021432	Soil	MFTFRTRRRRWWLGAITTALVVSLAAVLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFDLDL
Ga0210391_105948181	3300021433	Soil	MFTFRTRRRRWWLGAIITALAVILAAVLLRPMLEHEVRARIESAAVRHGAVARIGVVHVGVWPFL
Ga0210391_107492331	3300021433	Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRSMLEHRVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDLGHG
Ga0210392_109552522	3300021475	Soil	MFTYRTRRRRWWLGAIATALLVSLVTLLLRPMLEDAVRVRIESAAARHGAVARIGVVHVGVWPFLRLEGFDLD
Ga0210398_110798301	3300021477	Soil	MFTFRTRRRRWWLVAIATALVVSLAALLLRSRLEHAVRARIESAAVRHGAVARIGLVHVGVWPLLRLEGFDLELGRGV
Ga0210402_107683622	3300021478	Soil	MFTFRTRRRRWLGAIATALVVSVAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDFGHGVQLHADMI
Ga0210402_109948562	3300021478	Soil	MLTFRTRRRRWWLGAITTALVVSLAALLLRPKLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFDLE
Ga0210410_101294552	3300021479	Soil	MFTFRTRRRRWWVGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDLR
Ga0210410_105859201	3300021479	Soil	MFTFRTRRRRWWLGAIATALVASVAALLLRSMLEQGVRARIESAAVRHGAVARIGVVHVGVWP
Ga0126371_107282421	3300021560	Tropical Forest Soil	MLTFRNRGRMWWLGAIAAALFVSVAALLLRPKLEEAVRARIESAAVRHGVVARIGVVHVGVWPLLRLEAFDLDLGHGV
Ga0208193_10184831	3300025463	Peatland	MFTFRTRRQRWWLGAIATALIVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHIGVWPLLRLEGFDLDLGHGVRLNADMI
Ga0208714_10629372	3300025527	Arctic Peat Soil	MFTFRTRRRRWLGAIATALVVSLAALLLRSMLERGVRARIESAAVRHGAVARIGLVHVGL
Ga0208691_11058582	3300025612	Peatland	MLTFRTRRGRWWLGAITTALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFDLDLGHGVRLH
Ga0207663_104377132	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MFTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESAAVRHGAVPRIGVVQVGVWPLLRLEGFDLDLGH
Ga0207663_109686331	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MFKFRTCRRRWWIGAITTALVVSLAAVLLRPMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDLGH
Ga0207639_113842551	3300026041	Corn Rhizosphere	LLGAIAAALLASLAALLLRPMLENAVRARIESAAVRHGIAARVRLVHVGVRPLLRLEGVDLDLGHGVQLHA
Ga0179587_102017972	3300026557	Vadose Zone Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRPMLEHGVRARLESAAVRHGAVARIGVVHVGVWPLLRLEGFDLD
Ga0209332_10109381	3300027439	Forest Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDFGHGVQLHAA
Ga0209222_10047174	3300027559	Forest Soil	MLTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGF
Ga0209221_10458043	3300027609	Forest Soil	MFTFRTRRRWWWLGAITTALAVSVAAVLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFD
Ga0209422_11066631	3300027629	Forest Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDFGHGVQLHADMIAA
Ga0209447_100256072	3300027701	Bog Forest Soil	MFTLRTRRRRWWLVAIATALVVSLAALLLSPMLEHAVRARIESAAVRHGAVARIGVVHVG
Ga0209248_101232752	3300027729	Bog Forest Soil	MFTLRTRRRRWWLVAIATALVVSLAALLLSPMLEHAVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDLRSGV
Ga0209611_101851351	3300027860	Host-Associated	MFAFRIRGRRWWLGAIAFALIVSVAVPLLRSTLEQAIRARIESAAVRHGAIARIGLVHIGIWPLLRLEGVD
Ga0209169_103084341	3300027879	Soil	MFTFRTRRRRWWLGAIATALIVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLL
Ga0209624_100312751	3300027895	Forest Soil	MFTFRTRRRRWWLVAIGAALVVSVAALLLRPMLEHQVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDL
Ga0209526_100678154	3300028047	Forest Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDL
Ga0209526_106310392	3300028047	Forest Soil	MFTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFD
Ga0302234_102579662	3300028773	Palsa	MFTFRTRRRRWWFGAITTALVVSLTALLLRPMLEHGVRARIESEAVRHGAVARIRLVHVGLWPLLRLEGFDLDLRSGVR
Ga0311362_104098652	3300029913	Bog	MLTFRTRRRWWWLVAITTALVLALAALWLKPMIEQRVRARIESEAVHHGAVARIGAVHVGLWPMLRLEGFDLDVK
Ga0311338_112626511	3300030007	Palsa	MLTSRTRRRLWWLGAITTALVVTLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFDLELGHG
Ga0311370_102664831	3300030503	Palsa	MFTFRTRRRGWWLAAIATALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFDLELGHGVRL
Ga0311370_124100392	3300030503	Palsa	MFTFRTRRRRWWLVAIATALVASLATVLLRPVLEHAVRVRIESAAVRHGAVARIGLVHVGLWPLLSLEGFDLD
Ga0311372_117578482	3300030520	Palsa	MFTFRTRRRGWWLRAIATALVVSLTALLLRSTLEHAVRARIESAAVRRGAVARMDLVHVGVW
Ga0311354_102229522	3300030618	Palsa	MFTFRTRRRGWWLAAIATALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFDVELGHG
Ga0265753_11314571	3300030862	Soil	MFTFRTRRRRWWLGAIATALVVSLAALLLRPMLEHAVRARIESAALRHGAVARIGVVHVGIFPLLRLEGFD
Ga0302314_117341211	3300030906	Palsa	MFTFRTRRRGWWLAAIATALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLE
Ga0170823_121801281	3300031128	Forest Soil	MFTFRTRRRWWWLGAIATALVVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDL
Ga0302325_116073051	3300031234	Palsa	MLTSRTRRRLWWLGAITTALVVTLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWP
Ga0318534_104976371	3300031544	Soil	MLTFRNRGRMWWFGAIAAALFASVAALLLRPKLEEAVRARIESAAVRHGVVARIGQVHVGVWPLLRLEAFDLDLGH
Ga0318561_100720011	3300031679	Soil	MWWLGAVAAALFVSVAALLLRPKLEEAVRARIESAAARHGVVARIGLVHVGVWPWLRLEAFDLDLGHGVRFHADMIAATWFGRMR
Ga0310686_1008074942	3300031708	Soil	LTGAIAAALFVGLAAILLSSMLEHAVRARIESAAVHHGMVANIGQVHVGVWPLVRLDGIDLDLGHGLRVHADMIAATW
Ga0307474_114266111	3300031718	Hardwood Forest Soil	MFTFRTRRRRWWLGAITTALVVSLAALLLRPMLEHGVRARIESEAVRHGAVARIGVVHVGVWPLLRLEGFELELGHG
Ga0307469_101545583	3300031720	Hardwood Forest Soil	MWWLGAIAAALFASVAVLLLRPKLEEAARARIESAAVRHGVVARIGLVHVGVWPLLRLEAFDLDLG
Ga0307477_106435651	3300031753	Hardwood Forest Soil	MFTFRTRRRRWWLGAIATALAVSLAALLLRSMLEHGVRARIESAAVRHGAVARIGVVHVGVWPLLRLEGFDLDL
Ga0318546_104836761	3300031771	Soil	MLTFRNRGRMWWFGAIAAALFASVAALLLRPKLEEAVRARIESAAVRHGVVARIGQVHVGVWPLLRLEAFDLDLGHGVR
Ga0318547_107085302	3300031781	Soil	MLTFRTRARMWWLGTIAAALFVSVAALWLRPRLEEAVRARIESAAVRHGVVARIGLVHVGVWPLLRLEA
Ga0318529_102830601	3300031792	Soil	LFVSVAALLLRPKLEQAVRARIESAAVRHGVVARIGLVHVGVWPWLRLEAFDLDLGHGVRFHADMIAA
Ga0307473_113113351	3300031820	Hardwood Forest Soil	MRWLGAIAAALFVSVAALLLRPKLEEVVRARIESVAVRHGAVARIGLVHVGVWP
Ga0310917_105167261	3300031833	Soil	MWWFGAIAAALFASVAALLLRPKLEEAVRARIESAAVRHGVVARIGQVHVGVWPLLRLEAFDLD
Ga0306925_102400054	3300031890	Soil	MLTFRTRARMWWLGTIAAALFVSVAALWLRPRLEEAVRARIESAAVRHGVVARIGLVHVGVWPLLRLEAFDLD
Ga0318536_101893592	3300031893	Soil	MWWFGAIAAALFASVAALLLRPKLEEAVRARIESAAVRHGVVARIGLVHVGVWPWLRLEAFDLDLGHGVRFHADMIAA
Ga0306921_111717391	3300031912	Soil	MWWLGTIAAALFVSVAALWLRPRLEEAVRARIESAAVRHGVVARIGLVHVGVWPLLRLE
Ga0310913_100597713	3300031945	Soil	MWWLGAVAAALFVSVAALLLRPKLEQAVRARIESAAVRHGVVARIGLVHVGVWPWLRLEAFDLDLGHGVRFHADMIAATWF
Ga0306922_106523771	3300032001	Soil	MWWLGAVAAALFVSVAALLLRPKLEEAVRARIESAAARHGVVARIGLVHVGVWPWLRLEAFDLDLGHGVRFHADIIAATWFGRMRLAV
Ga0318533_105922911	3300032059	Soil	MWWLGTIAAALFVSVAALWLRPRLEEAVRARIESAAVRHGVVARIGLVHVGVWPLLRLEAFDLDLAH
Ga0318577_100606011	3300032091	Soil	MLTFRTRARMWWLGTIAAALFVSVAALWLRPRLEEAVRARIESAAVRHGVVARIGLVHVGVWPLLRLEAFDLDLGHGVRFHADTIA
Ga0307472_1015733211	3300032205	Hardwood Forest Soil	METFGNRGRMRWLGAIAAALFASVAVLVLRPKLEETARARIESAAVRHGVVARIGLVHVGVWPLLRLEAFDLDLGHG
Ga0335071_114438722	3300032897	Soil	MWWLGAIAAALFVGVAAMLLKPRLEAAVRARIESAALRHGVVARIGLVRVGVWPLLRLEAFDLDL
Ga0370514_118546_3_257	3300034199	Untreated Peat Soil	MFAFRIRGRRWWLGAITTALVASVAALLLRSTLEHEVRARIDSAALRHGAVARIGLVHIGVWPLLRLEGLDIDLGHGERLHADMI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079609

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences