Metagenome / Metatranscriptome Family F079516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079516
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	40 residues
Representative Sequence	FDRVPLFDYDIAGIEFSIFYEDRARNLWGTPTGFLYKMV
Number of Associated Samples	96
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.74 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	90.43 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (33.913 % of family members)
Environment Ontology (ENVO)	Unclassified (36.522 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.870 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 31.34% Coil/Unstructured: 68.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02597	ThiS	59.13
PF13519	VWA_2	11.30
PF00459	Inositol_P	2.61
PF11138	DUF2911	1.74
PF12543	DUF3738	1.74
PF17209	Hfq	1.74
PF02391	MoaE	0.87
PF00092	VWA	0.87
PF07238	PilZ	0.87
PF00575	S1	0.87
PF14559	TPR_19	0.87
PF00691	OmpA	0.87
PF05598	DUF772	0.87
PF13649	Methyltransf_25	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	59.13
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	59.13
COG0314	Molybdopterin synthase catalytic subunit MoaE	Coenzyme transport and metabolism [H]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.52 %
Unclassified	root	N/A	43.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	24.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	24.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	24.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	6.09 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	1.74 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.87 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.48 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	3.48 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2.61 %
Acidicapsa dinghuensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	1.74 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.87 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_101449796	Not Available	572	Open in IMG/M
3300009175\|Ga0073936_10447599	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300009639\|Ga0116122_1009884	All Organisms → cellular organisms → Bacteria	3666	Open in IMG/M
3300009641\|Ga0116120_1177475	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300009641\|Ga0116120_1252085	Not Available	553	Open in IMG/M
3300009665\|Ga0116135_1107200	Not Available	1015	Open in IMG/M
3300009759\|Ga0116101_1012370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1579	Open in IMG/M
3300009764\|Ga0116134_1110797	Not Available	987	Open in IMG/M
3300010379\|Ga0136449_104352861	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300014151\|Ga0181539_1370443	Not Available	515	Open in IMG/M
3300014153\|Ga0181527_1350801	Not Available	572	Open in IMG/M
3300014156\|Ga0181518_10252631	Not Available	895	Open in IMG/M
3300014156\|Ga0181518_10555411	Not Available	539	Open in IMG/M
3300014164\|Ga0181532_10159120	All Organisms → cellular organisms → Bacteria → Proteobacteria	1352	Open in IMG/M
3300014167\|Ga0181528_10460022	Not Available	697	Open in IMG/M
3300014167\|Ga0181528_10469933	Not Available	689	Open in IMG/M
3300014199\|Ga0181535_10173155	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300014200\|Ga0181526_10507949	Not Available	763	Open in IMG/M
3300014201\|Ga0181537_10274463	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300014489\|Ga0182018_10625582	Not Available	564	Open in IMG/M
3300014494\|Ga0182017_10143133	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	1549	Open in IMG/M
3300014495\|Ga0182015_10175617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1444	Open in IMG/M
3300014498\|Ga0182019_10471908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	866	Open in IMG/M
3300014501\|Ga0182024_12081129	Not Available	625	Open in IMG/M
3300014502\|Ga0182021_11492159	Not Available	814	Open in IMG/M
3300014654\|Ga0181525_10221952	Not Available	1031	Open in IMG/M
3300014655\|Ga0181516_10246334	Not Available	908	Open in IMG/M
3300014658\|Ga0181519_10528565	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300014838\|Ga0182030_10723314	Not Available	928	Open in IMG/M
3300014839\|Ga0182027_11336771	Not Available	713	Open in IMG/M
3300017931\|Ga0187877_1253500	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300017946\|Ga0187879_10661131	Not Available	581	Open in IMG/M
3300017948\|Ga0187847_10006342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8367	Open in IMG/M
3300017948\|Ga0187847_10335291	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300017988\|Ga0181520_10977953	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300017988\|Ga0181520_11046838	Not Available	538	Open in IMG/M
3300018040\|Ga0187862_10869372	Not Available	518	Open in IMG/M
3300018043\|Ga0187887_10395368	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300019082\|Ga0187852_1308643	Not Available	629	Open in IMG/M
3300019082\|Ga0187852_1447869	Not Available	500	Open in IMG/M
3300022521\|Ga0224541_1023542	Not Available	663	Open in IMG/M
3300022555\|Ga0212088_10496595	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300022861\|Ga0224528_1016548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1896	Open in IMG/M
3300023090\|Ga0224558_1123314	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300025473\|Ga0208190_1010841	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2294	Open in IMG/M
3300028268\|Ga0255348_1047278	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300028558\|Ga0265326_10254424	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300028560\|Ga0302144_10157161	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300028560\|Ga0302144_10216950	Not Available	619	Open in IMG/M
3300028566\|Ga0302147_10200412	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300028572\|Ga0302152_10025162	Not Available	1880	Open in IMG/M
3300028574\|Ga0302153_10121560	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300028574\|Ga0302153_10304604	Not Available	544	Open in IMG/M
3300028745\|Ga0302267_10215302	Not Available	847	Open in IMG/M
3300028748\|Ga0302156_10196961	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300028762\|Ga0302202_10077805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1983	Open in IMG/M
3300028765\|Ga0302198_10283517	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300028775\|Ga0302231_10301903	Not Available	671	Open in IMG/M
3300028779\|Ga0302266_10108624	Not Available	1124	Open in IMG/M
3300028783\|Ga0302279_10272409	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300028788\|Ga0302189_10382728	Not Available	554	Open in IMG/M
3300028808\|Ga0302228_10041676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2246	Open in IMG/M
3300028860\|Ga0302199_1049393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1460	Open in IMG/M
3300028909\|Ga0302200_10045741	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	2583	Open in IMG/M
3300029636\|Ga0222749_10502898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	656	Open in IMG/M
3300029882\|Ga0311368_10441375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	949	Open in IMG/M
3300029907\|Ga0311329_10559906	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300029907\|Ga0311329_10611151	Not Available	721	Open in IMG/M
3300029908\|Ga0311341_10816366	Not Available	515	Open in IMG/M
3300029911\|Ga0311361_11456105	Not Available	521	Open in IMG/M
3300029914\|Ga0311359_10704471	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300029922\|Ga0311363_11621478	Not Available	509	Open in IMG/M
3300029939\|Ga0311328_10306626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1173	Open in IMG/M
3300029939\|Ga0311328_10714167	Not Available	677	Open in IMG/M
3300029951\|Ga0311371_11484788	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300029952\|Ga0311346_10526519	Not Available	1087	Open in IMG/M
3300029955\|Ga0311342_10391574	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300029955\|Ga0311342_10409133	Not Available	1174	Open in IMG/M
3300029955\|Ga0311342_10472396	Not Available	1060	Open in IMG/M
3300029985\|Ga0302280_1147054	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300029988\|Ga0302190_10002756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11296	Open in IMG/M
3300029992\|Ga0302276_10331739	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300030000\|Ga0311337_11618301	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300030007\|Ga0311338_10348458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1612	Open in IMG/M
3300030007\|Ga0311338_10912549	Not Available	862	Open in IMG/M
3300030007\|Ga0311338_11255045	Not Available	699	Open in IMG/M
3300030020\|Ga0311344_10023955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8214	Open in IMG/M
3300030045\|Ga0302282_1059154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1718	Open in IMG/M
3300030045\|Ga0302282_1208103	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300030114\|Ga0311333_11791039	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300030225\|Ga0302196_10243448	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300030225\|Ga0302196_10333716	Not Available	677	Open in IMG/M
3300030519\|Ga0302193_10094203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1833	Open in IMG/M
3300030519\|Ga0302193_10359815	Not Available	748	Open in IMG/M
3300030618\|Ga0311354_11892532	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300030688\|Ga0311345_11044906	Not Available	609	Open in IMG/M
3300031236\|Ga0302324_101998570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa dinghuensis	728	Open in IMG/M
3300031249\|Ga0265339_10341592	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300031258\|Ga0302318_10132801	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300031259\|Ga0302187_10537233	Not Available	531	Open in IMG/M
3300031261\|Ga0302140_10175214	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1982	Open in IMG/M
3300031261\|Ga0302140_10226847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1657	Open in IMG/M
3300031344\|Ga0265316_10776803	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300031525\|Ga0302326_10324126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2443	Open in IMG/M
3300031525\|Ga0302326_11903665	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300031788\|Ga0302319_10133604	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3390	Open in IMG/M
3300031884\|Ga0316220_1172605	Not Available	765	Open in IMG/M
3300032515\|Ga0348332_14446055	Not Available	898	Open in IMG/M
3300032897\|Ga0335071_10087678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	3052	Open in IMG/M
3300032898\|Ga0335072_10415386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1436	Open in IMG/M
3300033402\|Ga0326728_10181003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2179	Open in IMG/M
3300033405\|Ga0326727_11207544	Not Available	526	Open in IMG/M
3300033561\|Ga0371490_1122215	Not Available	668	Open in IMG/M
3300033822\|Ga0334828_158617	Not Available	518	Open in IMG/M
3300034065\|Ga0334827_039534	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1803	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.39%
Host-Associated	Host-Associated	2.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.83%
Aquatic	Environmental → Aquatic	29.57%
Plants	Host-Associated → Plants	2.61%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	56.52%
Freshwater	Environmental → Aquatic → Freshwater	29.57%
Soil	Environmental → Terrestrial → Soil	10.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	56.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Lake	Environmental → Aquatic → Freshwater → Lake	1.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	56.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	33.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	13.04%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.96%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.09%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	5.22%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.22%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.48%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.61%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.74%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.74%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.74%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.87%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.87%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022861	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300028268	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v5	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029985	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030225	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_3	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031259	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033561	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fraction	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1014497961	3300004152	Bog Forest Soil	SVRGDITFDRVPLFDYDIAGIEFSIFYEDRSRNLWGTPSGFLYKFG*
Ga0073936_104475992	3300009175	Freshwater Lake Hypolimnion	YTFDRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKLV*
Ga0116122_10098843	3300009639	Peatland	VRGDITFDRVPLFDFDIAGIEFSIFYEDRSRNLWGTPSGFLYKFD*
Ga0116120_11774751	3300009641	Peatland	TFDRVPLFDYDIGGIEFSIFYEDRARNLWGTPTGFLYKMV*
Ga0116120_12520851	3300009641	Peatland	SVRGDYTFDRVPLFDYDIAGIEFSVFYEDRARNLWGTPSGFLYKFG*
Ga0116135_11072001	3300009665	Peatland	LFDYDLSGTEFSVFYDDRARNLWGTPTAFLFEMP*
Ga0116101_10123701	3300009759	Peatland	PRADYTFDRVPLFDYDLSGIEFSIFYDDRARNLWGTPTGFLYKLA*
Ga0116134_11107971	3300009764	Peatland	GDYTFDRVPLFDYDLSGIEFSIFYEDRARNLWGTPTGFLYKLV*
Ga0136449_1043528612	3300010379	Peatlands Soil	DYTFDRVPLFDFDISGVEFSIFYEDRARNLWGTPTGFLYKLV*
Ga0181539_13704432	3300014151	Bog	VPLFDFDISGIEFSIFYEDRSRNLWGTPSGFLYKFG*
Ga0181527_13508011	3300014153	Bog	VPLLDYDISGIEISIFYEDRARNLWGTPSGFLYKLV*
Ga0181518_102526311	3300014156	Bog	ADYTFDRVPLFDFDLSGIELSIFYEDRARNLWGTPTGFLYKAV*
Ga0181518_105554112	3300014156	Bog	ADYTFDRVPLFDFDLSGIELSIFYEDRARNLWGTPTGFLYRAV*
Ga0181532_101591202	3300014164	Bog	DRVPLFDYDIAGIEFSIFYEDRSRNLWGTPSGFLYKFG*
Ga0181528_104600221	3300014167	Bog	PLFDYDISGIEFSIFYEDRSRDLWGTPSGFLYKFD*
Ga0181528_104699332	3300014167	Bog	RGDYTFDRVPLLDYDMAGIEFSVFYDDRARNLWGTPTGFLFKLV*
Ga0181535_101731551	3300014199	Bog	DYTFDRVPLFDYDMSGIEFSIFYEDRARNLWGTPTGFLYKLV*
Ga0181526_105079492	3300014200	Bog	IPLFDFDASGIEFSMFYEDRARNLWGSPTGFLYKIV*
Ga0181537_102744631	3300014201	Bog	GDYTFDRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKLV*
Ga0182018_106255822	3300014489	Palsa	VRGDYTFDRVPLFDYDIGGIEVSIFYEDRARNLWGTPTGFLYRLV*
Ga0182017_101431331	3300014494	Fen	TFDRVPLFDFDISGIEFSIFYEDRSRNLWGTPSGFLYRFD*
Ga0182015_101756171	3300014495	Palsa	RGDYTFDRVPLFDYDIGGVEVSVFYVDRARNLWGTPTGFLYKLV*
Ga0182019_104719083	3300014498	Fen	RGDSTFDRVPLFDFDIAGLEFSIFYEDRSRNLWGTPSGFLYKVSEST*
Ga0182024_120811292	3300014501	Permafrost	DYTFDRVPLFDYDLSGIEFSIFYEDRARNLWGTPTGFLYKVV*
Ga0182021_114921592	3300014502	Fen	DYTFDRVPLFDFDVAGIEFSIFYEDRARNLWGTPTAFLYKLI*
Ga0181525_102219522	3300014654	Bog	DRVPLFDFDIAGIEFSIFYEDRARNLWGTPTGFMYRFS*
Ga0181516_102463342	3300014655	Bog	PLFDYDISGLEFSVFYEDRSRNLWGTPSGFLYKVV*
Ga0181519_105285652	3300014658	Bog	PLFDYDMAGIEFSIFYEDRARNLWGTPTAFLYKMV*
Ga0182030_107233141	3300014838	Bog	DYTFDRVPLFDYDISGIEFSIFYEDRARNLWGTPTGFLYKMG*
Ga0182027_113367711	3300014839	Fen	VPLFDYDLSGIEFSIFYEDRARDVWGTPTGFLYRLV*
Ga0187877_12535001	3300017931	Peatland	DYTFDRVPLFDFDISGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0187879_106611312	3300017946	Peatland	RVPLFDYDLSGIEFSIFYDDRARNLWGTPTGFLYKLA
Ga0187847_1000634210	3300017948	Peatland	DYTFDRVPLFDYDLSGIEFSIFYDDRARNLWGTPTGFLYKLA
Ga0187847_103352912	3300017948	Peatland	FDRVPLFDYDLSGIEFSIFYEDRARDVWGTPTGFLYRVV
Ga0181520_109779531	3300017988	Bog	GDGFFDRVPLYDFDLSGIEFSIFYEDRARNLWGAPSGFMFQVEGKD
Ga0181520_110468382	3300017988	Bog	RGDYTFDRVPLFDYDISGIEFSIFYEDRARNLWGTPSGFLYKMV
Ga0187862_108693722	3300018040	Peatland	NRVPLFDYDIGGIEFSIFYEDRARDLWGTPSGFLYKMS
Ga0187887_103953682	3300018043	Peatland	DYTFNRVPLFDYDIGGIEFSIFYEDRARDLWGTPSGFLYKMS
Ga0187852_13086431	3300019082	Peatland	RVPLFDYDIGGIEFSIFYEDRARNLWGTPTGFLYKMV
Ga0187852_14478692	3300019082	Peatland	RVPLFDYDMAGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0224541_10235422	3300022521	Soil	RVPLFDYDMAGIEFSIFYDDRARNLWGTPTGFLYKLV
Ga0212088_104965951	3300022555	Freshwater Lake Hypolimnion	YTFDRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0224528_10165481	3300022861	Soil	PLFDYDISGIEFSIYYDDRAWNMWGTPTAFLYKQLQSA
Ga0224558_11233142	3300023090	Soil	VPLFDFDISGIEFSIFYEDRARNLWGTPTGFLYKAV
Ga0208190_10108414	3300025473	Peatland	VRSDITFDRVPLFDFDIAGIEFSIFYDDRSRNLWGTPSGFLYKFD
Ga0255348_10472781	3300028268	Soil	TFDRVPLFDYDISGIEFSIFYEDRSRNLWGTPSGFLYKFS
Ga0265326_102544242	3300028558	Rhizosphere	VRGDYTFDRVPLFDYDIGGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0302144_101571612	3300028560	Bog	PLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKMV
Ga0302144_102169501	3300028560	Bog	DYTFDRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKMV
Ga0302147_102004121	3300028566	Bog	DRVPLFDYDISGIEFSMFYEDRSRNLWGTPSGFLYKFS
Ga0302152_100251623	3300028572	Bog	PLFDYDMSGIELSIFYEDRARNLWGTPTAFLYKLV
Ga0302153_101215602	3300028574	Bog	RVPLFDYDIGGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0302153_103046041	3300028574	Bog	VRCDYTFDRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0302267_102153021	3300028745	Bog	VPLFDFDIGGLEFSIFYEDRARNLWGSPTGFLYKLV
Ga0302156_101969611	3300028748	Bog	VRGDCTFDRVPLFDYDIAGIEFSIFYEDRARNLWGTPTGFLFRFS
Ga0302202_100778051	3300028762	Bog	YTFDRVPLFDLDIGGIEFSIFYEDRARNLWGTPTAFLYKLV
Ga0302198_102835171	3300028765	Bog	RVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0302231_103019031	3300028775	Palsa	SFDRVPLFDFDIGGLEVSIFYEDRARNLWGTPTGFLYKLV
Ga0302266_101086241	3300028779	Bog	SVRGDYTFDRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKMV
Ga0302279_102724091	3300028783	Bog	FDRVPLLDYDLSGTEFSVFYDDRARNLWGTPTAFLFKIP
Ga0302189_103827282	3300028788	Bog	FDRVPLFDYDIAGIEFSIFYEDRARNLWGTPTGFLFRFS
Ga0302228_100416763	3300028808	Palsa	EYSVRADYTFDRVPLFDYDLAGIEFSIFYEDRARNLWGTPTGFLYKLA
Ga0302199_10493933	3300028860	Bog	PLFDYDMAGIEFSIFYEDRARNLWGTPTAFLYKLV
Ga0302200_100457415	3300028909	Bog	DYVFDRVPLFDYDISGIEFSMFYEDRSRNLWGTPSGFLYKFS
Ga0222749_105028982	3300029636	Soil	GIFDRVPLFEYDLCGLEFSVFYNDRSRNLWGSPSGFLFQM
Ga0311368_104413752	3300029882	Palsa	FDRVPLFDYDAAAIEISIFYEDRARNLWGTPTAFLYKLV
Ga0311329_105599061	3300029907	Bog	FDRVPLFDYDIAGIEFSIFYEDRARNLWGTPTGFLYKMV
Ga0311329_106111511	3300029907	Bog	EYSVRGDYTFDRVPLFDYDIGGIEVSIFYEDRARNLWGTPTGFLYKMV
Ga0311341_108163661	3300029908	Bog	AYDRVPLFDYDLGGIEFSIFYEDRARNLWGTPSGFLFQMH
Ga0311361_114561052	3300029911	Bog	DRVPLFDYDIAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0311359_107044711	3300029914	Bog	FDRVPLFDYDMSGIEFSVFYEDRARNLWGTPTAFLYKLV
Ga0311363_116214782	3300029922	Fen	VPLFDFDIGGLEVSIFYEDRARNLWGTPTGFLYKLV
Ga0311328_103066261	3300029939	Bog	VPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKMV
Ga0311328_107141671	3300029939	Bog	DRVPLFDYDISGKELSIFYEDRSRNLWGTPTGFVYRVAQE
Ga0311371_114847882	3300029951	Palsa	EYSVRADYTFDRVPLFDYDLAGIEFSIFYDDRARNLWGTPTGFLYKLV
Ga0311346_105265192	3300029952	Bog	RCDYTFDRVPLFDFDISGIEFSIFYDDRSRNLWGTPSGFLYKFG
Ga0311342_103915741	3300029955	Bog	YSVRGDYTFDRVPLFDYDMSGIELSIFYEDRARNLWGTPTAFLYKLV
Ga0311342_104091331	3300029955	Bog	SVRGDYTFDRVPLFDYDMSGIEFSVFYEDRSRNLWGTPSAFLYKMV
Ga0311342_104723963	3300029955	Bog	YTFDRVPLFDYDIAGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0302280_11470541	3300029985	Fen	TFDRVPLFDYDMSGVELSIFYDDRARNLWGTPTAFLYKLV
Ga0302190_100027561	3300029988	Bog	TFDRVPLFDYDMSGIELSIFYEDRARNLWGTPTAFLYKLV
Ga0302276_103317392	3300029992	Bog	TFDRVPLFDYDIGGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0311337_116183011	3300030000	Fen	VPLFDYDIAGIEFSIFYEDRSRNLWGTPSGFLYKFG
Ga0311338_103484583	3300030007	Palsa	VRADYTFDRVPLFDYDLAGIEFSIFYDDRARNLWGTPTGFLYKLV
Ga0311338_109125491	3300030007	Palsa	RGDYTFDRVPLFDYDAAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0311338_112550451	3300030007	Palsa	DYTFDRVPLFDYDLSGIEFSVFYEDRARNLWGTPTGFLYKLV
Ga0311344_100239551	3300030020	Bog	DLVPLFDYDISGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0302282_10591541	3300030045	Fen	RGDYTFDRVPLFDYDIGGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0302282_12081032	3300030045	Fen	PLFDYDLSGTEFSVFYDDQARNLWGTPTAFLFEMP
Ga0311333_117910391	3300030114	Fen	DRVPLFDLDIGGIEFSAFYENRAWNLWGSPSGFLYQKD
Ga0302196_102434482	3300030225	Bog	CTFDRVPLFDYDIAGIEFSIFYEDRARNLWGTPTGFLFKFS
Ga0302196_103337162	3300030225	Bog	YSVRGDYTFDRVPLFDYDMSGVELSIFYDDRARNLWGTPTAFLYKLV
Ga0302193_100942031	3300030519	Bog	FDRVPLFDFDLGGIDLSIFYEDWARNLWGTPTAFLFKQV
Ga0302193_103598151	3300030519	Bog	SFDRVPLFDFDIGGLEFSIFYEDRARNLWGSPTGFLYKLV
Ga0311354_118925322	3300030618	Palsa	TFDRVPLFDYDLSGIELSVFYEDRARNMWGTPSGFLVQMT
Ga0311345_110449062	3300030688	Bog	SVRGDYTFDRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0302324_1019985701	3300031236	Palsa	PLFDYDAAAIEISIFYEDRARNLWGTPTAFLYKLV
Ga0265339_103415922	3300031249	Rhizosphere	YSVRGDYTFDRVPLFDFDMAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0302318_101328013	3300031258	Bog	DRVPLFDYDMAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0302187_105372332	3300031259	Bog	DRVPLFDYDIGGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0302140_101752141	3300031261	Bog	RGDYTFDRVPLFDYDLSGIEFSIFYEDRARNIWGTPTGFLYKVV
Ga0302140_102268473	3300031261	Bog	VPLFDYDIAGIEFSIFYEDRARNLWGTPTGFLYKLV
Ga0265316_107768032	3300031344	Rhizosphere	RVPLFDFDISGIEFSIFYEDRARNLWGTPTGFLYKLS
Ga0302326_103241261	3300031525	Palsa	YTFDRVPLFDYDLAGIEFSIFYDDRARNLWGTPTGFLYKLV
Ga0302326_119036652	3300031525	Palsa	VRGDYTFDRVPLFDYDMSGIEFSIFYEDRARNLWGTPTAFLYKLV
Ga0302319_101336041	3300031788	Bog	YTFDRVPLFDYDIGGVELSIFYEDRARNLWGTPTGFLYKMV
Ga0316220_11726052	3300031884	Freshwater	VPLFDYDISGIEFSIFYDDRSRNLWGTPSGFLYKIS
Ga0348332_144460551	3300032515	Plant Litter	SIRGDKSFDRVPLFDFDIAGIEFSIFYDDRAQDLWGTPTGFLYKMS
Ga0335071_100876783	3300032897	Soil	RVPLFDFDITGIEFSAFYEDRARNLWGSPTGFLYKLV
Ga0335072_104153863	3300032898	Soil	NYSFDRVPLFDYDLAGIEFSIFYNDRARNLWGSPTGFLYKVG
Ga0326728_101810032	3300033402	Peat Soil	LAPDSFDCVPLFDFDLAGIEFSIFYEDRARNLWGTPTGFLYKLA
Ga0326727_112075441	3300033405	Peat Soil	SVRCDYTFDRVPLLDCDIGGLEFSIFYEDRARNLWGTPTAFLYKII
Ga0371490_11222152	3300033561	Peat Soil	DRVPLLDFDISGIEFSIFYEDRSRNLWGTPSGFLYKFG
Ga0334828_158617_398_517	3300033822	Soil	FDRVPLFDYDIGGIEFSIFYEDRARNLWGTPTAFLYKMV
Ga0334827_039534_2_148	3300034065	Soil	EYSVRCDYTFDRVPLFDFDIGGIEFSIFYEDRARNLWGTPTGFLYKMV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079516

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences