Metagenome Family F079463

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079463
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	98 residues
Representative Sequence	MTRFLLAGTRPPQHDLPGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Number of Associated Samples	73
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.02 %
% of genes near scaffold ends (potentially truncated)	40.87 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (93.913 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.087 % of family members)
Environment Ontology (ENVO)	Unclassified (58.261 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.174 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.26% β-sheet: 20.16% Coil/Unstructured: 56.59%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF03795	YCII	46.96
PF04542	Sigma70_r2	33.04
PF08281	Sigma70_r4_2	13.91
PF00551	Formyl_trans_N	1.74
PF13305	TetR_C_33	0.87
PF00196	GerE	0.87
PF04993	TfoX_N	0.87
PF06736	TMEM175	0.87
PF10604	Polyketide_cyc2	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	46.96
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	33.04
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	33.04
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	33.04
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	33.04
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.87
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.91 %
Unclassified	root	N/A	6.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.91 %
Unclassified	root	N/A	6.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.91 %
Unclassified	root	N/A	6.09 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.83 %
Unclassified	root	N/A	6.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	67.83 %
Unclassified	root	N/A	6.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.09 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.09 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.09 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	6.09 %
Pseudonocardia acidicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acidicola	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_102670429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	911	Open in IMG/M
3300005332\|Ga0066388_103800620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M
3300005332\|Ga0066388_105503333	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005332\|Ga0066388_108689817	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005764\|Ga0066903_105636117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300006028\|Ga0070717_11948245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300009792\|Ga0126374_10154817	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300009792\|Ga0126374_10926176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300010043\|Ga0126380_10863194	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300010048\|Ga0126373_10007171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8778	Open in IMG/M
3300010048\|Ga0126373_10032717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4514	Open in IMG/M
3300010048\|Ga0126373_10371774	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300010048\|Ga0126373_10735509	All Organisms → cellular organisms → Bacteria → Proteobacteria	1046	Open in IMG/M
3300010358\|Ga0126370_10796950	Not Available	842	Open in IMG/M
3300010359\|Ga0126376_10254289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1497	Open in IMG/M
3300010359\|Ga0126376_10260159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1483	Open in IMG/M
3300010360\|Ga0126372_10272394	Not Available	1468	Open in IMG/M
3300010360\|Ga0126372_11342565	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300010361\|Ga0126378_10313478	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300010361\|Ga0126378_10431627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1431	Open in IMG/M
3300010361\|Ga0126378_10818137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300010361\|Ga0126378_11784398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300010361\|Ga0126378_12004236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300010376\|Ga0126381_100029919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6485	Open in IMG/M
3300010376\|Ga0126381_100296035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2214	Open in IMG/M
3300010376\|Ga0126381_102906286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300010376\|Ga0126381_103358227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300010398\|Ga0126383_10452689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300012971\|Ga0126369_10504566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1268	Open in IMG/M
3300012971\|Ga0126369_11061517	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012971\|Ga0126369_11500294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300012971\|Ga0126369_11915916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300012971\|Ga0126369_12695777	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300016270\|Ga0182036_10482750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300016270\|Ga0182036_11379709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300016294\|Ga0182041_10414829	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300016294\|Ga0182041_11020811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300016319\|Ga0182033_10195132	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300016357\|Ga0182032_11694214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300016371\|Ga0182034_10041295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acidicola	2978	Open in IMG/M
3300016387\|Ga0182040_11738144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300016404\|Ga0182037_11756211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300017961\|Ga0187778_10176695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1354	Open in IMG/M
3300017972\|Ga0187781_10006959	All Organisms → cellular organisms → Bacteria	8314	Open in IMG/M
3300017974\|Ga0187777_10198317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1352	Open in IMG/M
3300020150\|Ga0187768_1059377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	854	Open in IMG/M
3300021560\|Ga0126371_10054981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3820	Open in IMG/M
3300021560\|Ga0126371_10581439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300021560\|Ga0126371_11151837	Not Available	913	Open in IMG/M
3300021560\|Ga0126371_11347278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300021560\|Ga0126371_12072339	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300021560\|Ga0126371_13180894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300026551\|Ga0209648_10340254	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300026551\|Ga0209648_10605084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300027703\|Ga0207862_1014536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2324	Open in IMG/M
3300027703\|Ga0207862_1132745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300031231\|Ga0170824_109131695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2188	Open in IMG/M
3300031543\|Ga0318516_10013919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3959	Open in IMG/M
3300031543\|Ga0318516_10470729	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031543\|Ga0318516_10743505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300031544\|Ga0318534_10546270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300031544\|Ga0318534_10789807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300031546\|Ga0318538_10003387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5723	Open in IMG/M
3300031546\|Ga0318538_10147097	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300031549\|Ga0318571_10324066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300031564\|Ga0318573_10293359	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031572\|Ga0318515_10620081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300031640\|Ga0318555_10537312	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031640\|Ga0318555_10722101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300031680\|Ga0318574_10157500	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300031681\|Ga0318572_10054769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2157	Open in IMG/M
3300031681\|Ga0318572_10081367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1800	Open in IMG/M
3300031681\|Ga0318572_10671142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300031713\|Ga0318496_10268132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	942	Open in IMG/M
3300031736\|Ga0318501_10015324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3089	Open in IMG/M
3300031747\|Ga0318502_10898030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300031751\|Ga0318494_10010068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4446	Open in IMG/M
3300031764\|Ga0318535_10017973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2676	Open in IMG/M
3300031765\|Ga0318554_10110283	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300031765\|Ga0318554_10767149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300031768\|Ga0318509_10124568	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300031769\|Ga0318526_10042309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1712	Open in IMG/M
3300031771\|Ga0318546_10467012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300031771\|Ga0318546_10916746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	617	Open in IMG/M
3300031779\|Ga0318566_10191592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300031781\|Ga0318547_10123397	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300031781\|Ga0318547_10497015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300031782\|Ga0318552_10623966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300031794\|Ga0318503_10008447	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300031796\|Ga0318576_10066568	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300031796\|Ga0318576_10307555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300031819\|Ga0318568_10887699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M
3300031821\|Ga0318567_10786088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300031832\|Ga0318499_10032909	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300031833\|Ga0310917_10663375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300031846\|Ga0318512_10602514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300031860\|Ga0318495_10160645	Not Available	1013	Open in IMG/M
3300031879\|Ga0306919_10773219	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031890\|Ga0306925_11280968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300031890\|Ga0306925_11435152	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031912\|Ga0306921_11339683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300031942\|Ga0310916_11134316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300031954\|Ga0306926_12392243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300031959\|Ga0318530_10399222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300032008\|Ga0318562_10457316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300032025\|Ga0318507_10379473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300032039\|Ga0318559_10224169	Not Available	867	Open in IMG/M
3300032063\|Ga0318504_10240585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300032065\|Ga0318513_10025010	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300032089\|Ga0318525_10677547	Not Available	525	Open in IMG/M
3300032091\|Ga0318577_10029189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2369	Open in IMG/M
3300032094\|Ga0318540_10021108	All Organisms → cellular organisms → Bacteria	2715	Open in IMG/M
3300033289\|Ga0310914_11252498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300033290\|Ga0318519_11018198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.57%
Loam	Environmental → Terrestrial → Soil → Loam	6.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	59.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.70%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	28.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.09%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1026704293	3300005332	Tropical Forest Soil	MTRFLLAGTRADSADEVALGAAAHRVVEASMWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR*
Ga0066388_1038006202	3300005332	Tropical Forest Soil	MMRFLLAGTRPPGPGEPGELALTAAAHRVVAAAAWHGWLRRWGLLLSFGLPRDPAAELRACLIVVASDEQAADRLAAGWGAVSGYRVVVLPLTGGSSGETGR*
Ga0066388_1055033332	3300005332	Tropical Forest Soil	MMRFLLAGTRPPGPGELALTVAAHRVVAAAAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAASDEQAANRLAAGWGAVSGYRVSVLPLTGGSSGEAGR*
Ga0066388_1086898172	3300005332	Tropical Forest Soil	MMQFLLAGTRADSADELGLGVAAHRVVQASMWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLADGWGMVSGYRVAVLALTGEGAR*
Ga0066903_1056361171	3300005764	Tropical Forest Soil	MTRFLLAGTRADSAGEVALGAAAHRVVEASMWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLTLTGEGAR*
Ga0070717_119482452	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LMRFLLAGTRPSPADLPGSSGEAGEVALVTAAHRVVAAAAWYGWLRRWGLLLSFGLAGDPVAEVRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGEGTR*
Ga0126374_101548172	3300009792	Tropical Forest Soil	MRFLLAGTRPPGSGEPGELALAAAAHRVVAATAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAASDEQAAERVAAGWGAVSGYRVVVLPLTGGSSGETGR*
Ga0126374_109261761	3300009792	Tropical Forest Soil	MTRFLLAGTRADRAGEVALGAAAHRVVEASMWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWEMVSGYRVAVLALTG
Ga0126380_108631942	3300010043	Tropical Forest Soil	MRFLLAGTRPPGSGEPGELALAAAAHRVVAATAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAVNDEQAADRLAAGWGAVSGYRVVVLPLTGGSSGETGR*
Ga0126373_100071711	3300010048	Tropical Forest Soil	MRFLLAGTRPPGSGETGELALTTAAHRVVAAAAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAASDEQAANRLAAGWGAVSGYRVAVLPLTGGSSGEAGR*
Ga0126373_100327177	3300010048	Tropical Forest Soil	MTRFLLAGTRPALGSSDELALAAAAHCVVEAAAWHGWLRRWGLLLSFGLPRDPGAVLRACLVVAASDEQAAERLAAGWAAVGGYRVSVLPLTGERAGETGW*
Ga0126373_103717742	3300010048	Tropical Forest Soil	MRFLLAGTRPPGPGEPGELALTAAAHRVVAAAAWHGWLRRWGLLLSFGLPRDPAAELRACLIVVASDEQAADRLAAGWGAVSGYRVVVLPLTGGSSGETGR*
Ga0126373_107355092	3300010048	Tropical Forest Soil	MTQFLLAGSAGPAGPAGPGGELGLAAAAHRVVAAARWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR*
Ga0126370_107969502	3300010358	Tropical Forest Soil	GSGEPGELALAAAAHRVVAAAAWHSWLRRWGLLLSFGLPRDSAAELRACLIVAASDEQAADRLAAGWGAVSGYRVVVLPLTGGNSGETGR*
Ga0126376_102542892	3300010359	Tropical Forest Soil	MRFLLAGTRPPGPGEPGELALAAAAHRVVAAAAWQSWLRRWGLLLSFGLPRDPAAELRACLIVAVNDEQAADRLAAGWGAVSGYRVVVLPLTGGSSGETGR*
Ga0126376_102601593	3300010359	Tropical Forest Soil	MTRFLLAGTRADRAGEVALGAAAHRVVAASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR*
Ga0126372_102723941	3300010360	Tropical Forest Soil	GELALTAAAHRVVAAAAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAASDEQAANRLAAGWGAVSGYRVSVLPLTGGSSGEAGR*
Ga0126372_113425652	3300010360	Tropical Forest Soil	MTRFLLAGTLPGSPGELGLAAAAHRVVAAAAWFGWLRRWGLLLSFGLARDPVAEVRACLVVLASDGAAAERLAAGWGMVSGYRVAVLALTGEGAR*
Ga0126378_103134782	3300010361	Tropical Forest Soil	MRFLLAGTRPPEPGELALTAAAHRVVAAAAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAASDEQAANRLAAGWGAVSGYRVAVLPLTGESSGEAGR*
Ga0126378_104316272	3300010361	Tropical Forest Soil	MTRFLLAGTRPALGSSDELALAAAAHCVVEAAAWHGWLRRWGLLLSFGLPRDPGAALRACLVVAASDEQAAERLAAGWAAVGGYRVSVLPLTGERAGETGW*
Ga0126378_108181373	3300010361	Tropical Forest Soil	MTRFLLAGTRADRAGEVALGAAAHRVVAASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEG
Ga0126378_117843982	3300010361	Tropical Forest Soil	MTRFLLAGTLPSSPGLSGSPGELGLAAAAHRVVAAAAWFGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR*
Ga0126378_120042362	3300010361	Tropical Forest Soil	MRFLLAGTRPPGPGEPGELALTAAAHRVVAAAAWHGWLRRWGLLLSFGLPRDPAAELRACLIVVASDEQAADRLAAGWGAVSGYRVVVLPLTGGSSG
Ga0126381_1000299195	3300010376	Tropical Forest Soil	MTRFLLAGSAGPRGPAGPGGPGGELALAAAAHRVVAAARWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWGLVSGYRVAVLALTGPGEDTR*
Ga0126381_1002960353	3300010376	Tropical Forest Soil	MTRFLLAGTRADSADEVALGVAAHRVVEASTWFGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR*
Ga0126381_1029062861	3300010376	Tropical Forest Soil	MRFLLAGTRPPGPGEPGELALTAAAHRVVAAVAWHGWLRRWGLLLSFGLPRDPAAELRACLIVVASDEQAADRLAAGWGAVSGYRVVVLPLTGGSSGETGR*
Ga0126381_1033582271	3300010376	Tropical Forest Soil	MTRFLLAGTRADRAGEVALGAAAHRVVAASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTSEGAR*
Ga0126383_104526892	3300010398	Tropical Forest Soil	MRFLLAGTRPPGSGEPGELALAAAAHRVVAATAWHGWLRRWGLLLSFGLPRDPAAELRACLIVAVNDEQAADRLAAGWGAVSGYRVVVLPLTGGSSGETGR*
Ga0126369_105045661	3300012971	Tropical Forest Soil	MMRFLLAGTRPPGPGEPGELALTVAAHRVVAAAAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAASDEQAANRLAAGWGAVSGYRVSVLPLTGGSSGEAGR*
Ga0126369_110615172	3300012971	Tropical Forest Soil	MTRFLLAGTLPGSPGELGLAAAAHRVVAAAAWFGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDRAAERLAAGWGMVSGYRVAVLALTGEEPS*
Ga0126369_115002942	3300012971	Tropical Forest Soil	MTRFLLAGTRADSADEVALGAAAHRVVAASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDEPTAERLAAGWGTVSGYRVAVLALTGEGAR*
Ga0126369_119159161	3300012971	Tropical Forest Soil	MRFLLAGTRPPGPGEAGELALTAAAHRVVAAAAWHSWLRRWGLLLSFGLPRDPAAELRACLIVVASDEQAADRLAAGWGAVSGYR
Ga0126369_126957772	3300012971	Tropical Forest Soil	MRFLLAGTRPPGPGEPGELALTAAAHRVVAAVAWHGWLRRWGLLLSFGLPRDSAAELRACLIVAASDEQAADRLAAGWGAVSGYRVAVLPLTGGSSGETGR*
Ga0182036_104827502	3300016270	Soil	MTRFLLAGTRPPQHDLPGSPGELALTAAAHRLVVAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0182036_113797092	3300016270	Soil	MTRLLLAGSRGPGGELGLAAAAHRVVAAASWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDRAAERLAAGWGRVSGYRVAVLALTGEST
Ga0182041_104148293	3300016294	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAATAAWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYQVAVLPLTGWTAGASAP
Ga0182041_110208111	3300016294	Soil	RGARDGPDGMTRFLLAGSASSGGPGGPGGELGLAAVAHRVVAAATWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWEMVSGYRVAVLALTGEPGAEGTR
Ga0182033_101951322	3300016319	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0182032_116942141	3300016357	Soil	MTRFLLAGSAGPGGPAGTGGELGLAAAAHRVVAAATWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDEAAAERLAAGWGLVSGYRVAVLALTGPGEDAR
Ga0182034_100412954	3300016371	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0182040_117381441	3300016387	Soil	GLLGSGGPGGEVGLAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWEMVSGYRVAVLALTGEPGAEGTR
Ga0182037_117562111	3300016404	Soil	MTRFLLAGSAGPGGPGGELGLAAAAHRVVAAASWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDEAAAERLAAGWGLV
Ga0187778_101766952	3300017961	Tropical Peatland	MTRFLLAGTRPPGPESPGSPGELALAAAAHGVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDGQAAERLAAGWGTVSGYRVAVLELEGTS
Ga0187781_1000695910	3300017972	Tropical Peatland	MTRFLLAGSAGSAGELGLAAAAHRVVAAVAWYGWLRRWGLLLSFGLARDPAAEVRACLVVLASNDDAAERLAAGWGTVSGYRVAVLALTGSG
Ga0187777_101983173	3300017974	Tropical Peatland	MTGFLLAGTRAPRPGEPGGPGEPGEPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEPRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGWAAGASAP
Ga0187768_10593771	3300020150	Tropical Peatland	RLGRGPRDRADGMTGFLLAGTRAPRPGEPGGPGEPGEPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEPRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGWAAGASAP
Ga0126371_100549814	3300021560	Tropical Forest Soil	MTRFLLAGTRPALGSSDELALAAAAHCVVEAAAWHGWLRRWGLLLSFGLPRDPGAVLRACLVVAASDEQAAERLAAGWAAVGGYRVSVLPLTGERAGETGW
Ga0126371_105814392	3300021560	Tropical Forest Soil	GSAGPAGPAGPGGELGLAAAAHRVVAAARWYGWLRRWGLLLSVGLARDPVAEVRAGLVVLASDDAAAERLAAGWGLVSGYRVAVLALTGPGEDAR
Ga0126371_111518371	3300021560	Tropical Forest Soil	MTRFLLAGTRPPRHDLPGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0126371_113472782	3300021560	Tropical Forest Soil	MTRFLLAGTRADRAGEVALGAAAHRVVAASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR
Ga0126371_120723392	3300021560	Tropical Forest Soil	MMRFLLAGTRPPGPGELALTVAAHRVVAAAAWHSWLRRWGLLLSFGLPRDPAAELRACLIVAASDEQAANRLAAGWGAVSGYRVAVLPLTGGSSGEAGR
Ga0126371_131808941	3300021560	Tropical Forest Soil	MMRFLLAGTRPPGPGEPGELALTAAAHRVVAAAAWHGWLRRWGLLLSFGLPRDPAAELRACLIVVASDEQAADRLAAGWGAVSGYRVVVLPLTGGSSGETGR
Ga0209648_103402542	3300026551	Grasslands Soil	VNEFLLAGTQPPRPSSGELALAGAAHRVVTAAAWYGWMRRWGLLLSYGLPDESRAGVRACLVVAASDEQAAQRLAAGWATVSGYRVAVLALTSEQVGETGP
Ga0209648_106050841	3300026551	Grasslands Soil	MTRFLLAGTRPGSPGLPGSPGSPAELGLAVAAHRVLEAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAAAWGTVSGYRVAVLA
Ga0207862_10145363	3300027703	Tropical Forest Soil	MTRFLLAGTRAPRLGGPGDAGEPGGYGELALAAAAHRMVAAAAWYGWLRRWGLVLSFGLARDPMAELRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGWAAGAGAP
Ga0207862_11327451	3300027703	Tropical Forest Soil	MTRFLLAGTRPPGPQSPGSPGELALAAAAHGVVAAAAWYGWLRRWGLLLSFGLAHDPVAEVRACLVVLASDGQAAERLAAGWGTVSGYRVAVLELE
Ga0170824_1091316952	3300031231	Forest Soil	VTEFLLAGTRAPRPGSGELALTAAARRVTQAAEWHGWMRWCGLLLSYGLPGEPQAGVRACLVVAVSDEEAAKRLAAGWAAVSGYRVAVLALTGELAGESER
Ga0318516_100139196	3300031543	Soil	MTRFLLAGTRADGAGEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPAAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLTLTGEGAR
Ga0318516_104707292	3300031543	Soil	MTRFLLAGTRPPQHDLPGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0318516_107435051	3300031543	Soil	GGPGGSGGELGLAAAAHRVVAAATWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDEAAAERLAAGWGLVSGYRVAVLALTGPGEDGR
Ga0318534_105462702	3300031544	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAATAAWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGWAAG
Ga0318534_107898072	3300031544	Soil	GELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0318538_100033873	3300031546	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0318538_101470972	3300031546	Soil	MTRFLLAGTRADGAGEVALGASAHRVVEASTWYGWLRRWGLLLSFGLARDPAAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLTLTGEGAR
Ga0318571_103240662	3300031549	Soil	RARGMTRFLLAGTRPPQHDLPGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0318573_102933592	3300031564	Soil	MTRFLLAGTRPDVAGELALATAAHRVLEAAAWCGWLRRWGLLLSFGLARDPVTEVRACLVVLASDDQAAERLAAGWGMVSGYRVAVLPLAGENTR
Ga0318515_106200812	3300031572	Soil	MTRFLLAGTRADSADEVALGAAAHRVVGASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR
Ga0318555_105373122	3300031640	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAATADWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGWAAGASAP
Ga0318555_107221011	3300031640	Soil	RGARDRPDGMTRFLLAGTRPDVAGELALATAAHRVLEAAAWCGWLRRWGLLLSFGLARDPVTEVRACLVVLASDDQAAERLAAGWGMVSGYRVAVLPLAGENTR
Ga0318574_101575001	3300031680	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAATAAWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYQV
Ga0318572_100547694	3300031681	Soil	MTRFLLAGTRPGSPDEPGLAAAARRVVETAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDRAAERLAAGWEMVSGYRVAVLALTGEPVAEGTR
Ga0318572_100813671	3300031681	Soil	MTRFLLAGTRPPQHDLPGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0318572_106711422	3300031681	Soil	MTRFLLAGSRGPGGELGLAAAAHRVVAAASWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDAAAERLAAGWGLVSGYRVAVLA
Ga0318496_102681322	3300031713	Soil	MTRFLLAGSAGPGGPGGELGLAAAARRVVAAATWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWGLVSGYRVAVLALTGPEEDAR
Ga0318501_100153241	3300031736	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRV
Ga0318502_108980302	3300031747	Soil	ADGAGEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDEAAAERLAAGWGLVSGYRVAVLALTGPGEDGR
Ga0318494_100100682	3300031751	Soil	MTRFLLAGTRPGSPDEPGLAAAARRVVETAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDRAAERLAAGWEMVSGYRVAVLALTGEPGAEGTR
Ga0318535_100179734	3300031764	Soil	MTRFLLAGTRPPQHDLPGSPGELALAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0318554_101102831	3300031765	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAAAAAWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYRVAVL
Ga0318554_107671492	3300031765	Soil	MTQFLLAGTRADSADEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR
Ga0318509_101245682	3300031768	Soil	MTRFLLAGTRADGAGEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPAAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLALTGEGAR
Ga0318509_102134622	3300031768	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWG
Ga0318526_100423093	3300031769	Soil	MTRFLLAGTRPPPPDVPDSLGLAAVARHVVDAAAWFGWLRRWGLLLSFGLAGDPVAEVRACLVVLASDDRAAERLAAGWGTVSGYRVAVLPERCQ
Ga0318546_104670123	3300031771	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAAAAAWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYQVAVLPLTGW
Ga0318546_109167462	3300031771	Soil	MTRFLLAGSAGPGGPAGTGGELGLAAAAHRVVAAARWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWEMVSGYRVAVLALTGEPVAEGTR
Ga0318566_101915923	3300031779	Soil	MTRFLLAGTRADSADEVALGAAAHRVVGASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDEAAAERLAAGWGLVSGYRVAVLALTGPGEDGR
Ga0318547_101233973	3300031781	Soil	MTRFLLAGTRADGAGEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAGAERLAAGWGLVSGYRVAVL
Ga0318547_104970151	3300031781	Soil	MTRFLLAGTRADSADEVALGAAAHRVVGASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLTLTGEGAR
Ga0318552_106239662	3300031782	Soil	APQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0318503_100084472	3300031794	Soil	MTRFLLAGTRPPQHDLPGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0318576_100665681	3300031796	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLT
Ga0318576_103075552	3300031796	Soil	GARDGTDGMTRFLLAGTRPGSPDEPGLAAAARRVVETAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWGLVSGYRVAVLALTGPGEDGR
Ga0318568_108876991	3300031819	Soil	LGRGPRDRPDGMTRFLLAGTRARPWDPVGPAEPGEPGGPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPMAELRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGWAAGASAP
Ga0318567_107860882	3300031821	Soil	MTRFLLAGSRGPGGELGLAAAAHRVVAAASWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAGAERLAAGWGLVSGYRVAVLALTGPGEDGR
Ga0318499_100329091	3300031832	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0310917_106633752	3300031833	Soil	GELGLAAAAHRVVAAATWYGWLRRWGLLLSFGLARDPAAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLTLTGEGAR
Ga0318512_106025142	3300031846	Soil	LLAGTRPDVAGELALATAAHRVLEAAAWCGWLRRWGLLLSFGLARDPVTEVRACLVVLASDDQAAERLAAGWGMVSGYRVAVLPLAGENTR
Ga0318495_101606451	3300031860	Soil	LAGTRPGSPDEPGLAAAARRVVETAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDRAAERLAAGWEMVSGYRVAVLALTGEPVAEGTR
Ga0306919_107732192	3300031879	Soil	MTRFLLAGTRADGAGEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPVAKVRACLVVLASDEAAAERLAAGWGLVSGYRVAVLALTGEGAR
Ga0306925_112809682	3300031890	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAATAAWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYRVAVLPLTGGTRW
Ga0306925_114351522	3300031890	Soil	MTRFLLAGSAGPGGPAGPGGELGLAAAAHRVVAAARWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWGLVSGYRVAVLALTGPEEDAR
Ga0306921_113396831	3300031912	Soil	DGMTRFLLAGSAGPGGPAGTGGELGLAAAAHRVVAAARWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWGLVSGYRVAVLALTGPGEDAR
Ga0310916_111343161	3300031942	Soil	ARDRADGMTRFLLAGTRADGAGEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPAAEVRACLVVLASDERAAERLAEGWGTVSGYRVAVLTLTGEGAR
Ga0306926_123922431	3300031954	Soil	FGRGPRDRARGMTRFLLAGTRPPQHDLPGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0318530_103992222	3300031959	Soil	MTRFLLAGTRADSADEVALGAAAHRVVEASMWYGWLRRWGLLLSFGLARDPAAEVRACLVVLASDERAAERLAERWGTVSGYRVAVLALTGEGAR
Ga0318562_104573161	3300032008	Soil	MTRFLLAGTRADSADEVALGAAAHRVVGASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDERAAERLAEGWGTVS
Ga0318507_103794731	3300032025	Soil	MTRFLLAGTRPDVAGELALATAAHRVLEAAAWCGWLRRWGLLLSFGLARDPVTEVRACLVVLASDDQAAERLAAGWGMVSGYRVAVLP
Ga0318559_102241691	3300032039	Soil	VRLGRGARDGTDGMTRFLLAGTRPGSPDEPGLAAAARRVVETAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDRAAERLAAGWEMVSGYRVAVLALTGEPVAEGTR
Ga0318504_102405852	3300032063	Soil	ARDRADGMTRFLLAGTRADGAGEVALGAAAHRVVEASTWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDEAAAERLAAGWGLVSGYRVAVLALTGPGEDGR
Ga0318513_100250103	3300032065	Soil	MTRFLLAGTRPPPEFAGGSGELALAAAAHRLAATAAWYGWLRRWGLLLSFGLARDPVAELRACLVVLASDDQAAERLAAGWGTVSGYRVAVLRLTGWAAGA
Ga0318525_106775472	3300032089	Soil	MTRFLLAGSRGPGGELGLAAAAHRVVAAASWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDAAAERLAAGWGLVSGYRVAVLALTGPGEDAR
Ga0318577_100291893	3300032091	Soil	AHGMTRFLLAGTRPPQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLTLTGEGTR
Ga0318540_100211085	3300032094	Soil	MTRFLLAGTRPPQHDLTGSPGELALAAAAHRLVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVA
Ga0310914_112524981	3300033289	Soil	GPRDRARGMTRFLLAGTRPPQHDLPGSPGELALAAAAHRVVAAAAWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDQAAERLAGGWGMVSGYRVAVLALTGEGTR
Ga0318519_110181981	3300033290	Soil	MTRFLLAGSAGPGGPGSELGLAAAAHRVVAAARWYGWLRRWGLLLSFGLARDPVAEVRACLVVLASDDAAAERLAAGWGLVSGYRVAVLALTGPGED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences