Metagenome Family F079461

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079461
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	46 residues
Representative Sequence	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGTVPSN
Number of Associated Samples	67
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.61 %
% of genes near scaffold ends (potentially truncated)	95.65 %
% of genes from short scaffolds (< 2000 bps)	93.91 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.783 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.217 % of family members)
Environment Ontology (ENVO)	Unclassified (73.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.826 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.95% β-sheet: 0.00% Coil/Unstructured: 52.05%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF04800	NDUS4	8.70
PF00593	TonB_dep_Rec	5.22
PF02518	HATPase_c	4.35
PF04392	ABC_sub_bind	3.48
PF03401	TctC	2.61
PF00300	His_Phos_1	2.61
PF00589	Phage_integrase	1.74
PF04828	GFA	1.74
PF13180	PDZ_2	1.74
PF00892	EamA	1.74
PF00816	Histone_HNS	1.74
PF00561	Abhydrolase_1	0.87
PF00476	DNA_pol_A	0.87
PF02464	CinA	0.87
PF07813	LTXXQ	0.87
PF04519	Bactofilin	0.87
PF01872	RibD_C	0.87
PF17201	Cache_3-Cache_2	0.87
PF00378	ECH_1	0.87
PF00596	Aldolase_II	0.87
PF00856	SET	0.87
PF06186	DUF992	0.87
PF00196	GerE	0.87
PF00501	AMP-binding	0.87
PF00106	adh_short	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.48
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.61
COG2916	DNA-binding protein H-NS	Transcription [K]	1.74
COG3791	Uncharacterized conserved protein	Function unknown [S]	1.74
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.87
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.87
COG1546	Nicotinamide mononucleotide (NMN) deamidase PncC	Coenzyme transport and metabolism [H]	0.87
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.87
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.78 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.78 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.78 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	46.09 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.39 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.35 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.43 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Alphaproteobacteria bacterium MarineAlpha3_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha3_Bin2	1.74 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.87 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.35 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Alphaproteobacteria bacterium MarineAlpha3_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha3_Bin2	1.74 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.87 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Alphaproteobacteria bacterium MarineAlpha3_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha3_Bin2	1.74 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.87 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.87 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.87 %
unclassified Roseomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Alphaproteobacteria bacterium MarineAlpha3_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha3_Bin2	1.74 %
Roseomonas sp. JC162	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. JC162	0.87 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.87 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.87 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10129814	Not Available	525	Open in IMG/M
3300005332\|Ga0066388_103873708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	763	Open in IMG/M
3300005332\|Ga0066388_104611509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	701	Open in IMG/M
3300005332\|Ga0066388_105293027	Not Available	654	Open in IMG/M
3300005332\|Ga0066388_105390433	Not Available	648	Open in IMG/M
3300005332\|Ga0066388_105556081	Not Available	638	Open in IMG/M
3300005332\|Ga0066388_108701013	Not Available	504	Open in IMG/M
3300005436\|Ga0070713_101106810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	766	Open in IMG/M
3300005440\|Ga0070705_100346156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1082	Open in IMG/M
3300005518\|Ga0070699_100269906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1522	Open in IMG/M
3300005764\|Ga0066903_104692904	Not Available	727	Open in IMG/M
3300005764\|Ga0066903_109149433	Not Available	500	Open in IMG/M
3300006028\|Ga0070717_11978061	Not Available	525	Open in IMG/M
3300009792\|Ga0126374_10621478	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300010043\|Ga0126380_10872941	Not Available	744	Open in IMG/M
3300010046\|Ga0126384_10984580	Not Available	767	Open in IMG/M
3300010048\|Ga0126373_12412120	Not Available	586	Open in IMG/M
3300010358\|Ga0126370_11697683	Not Available	608	Open in IMG/M
3300010360\|Ga0126372_11554547	Not Available	699	Open in IMG/M
3300010360\|Ga0126372_11620256	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300010362\|Ga0126377_13238918	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_10914490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	980	Open in IMG/M
3300010863\|Ga0124850_1023918	All Organisms → cellular organisms → Bacteria → Proteobacteria	1962	Open in IMG/M
3300012971\|Ga0126369_12644428	Not Available	586	Open in IMG/M
3300016270\|Ga0182036_10298007	Not Available	1225	Open in IMG/M
3300016270\|Ga0182036_10702101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300016270\|Ga0182036_11773666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	522	Open in IMG/M
3300016294\|Ga0182041_10716286	Not Available	888	Open in IMG/M
3300016294\|Ga0182041_10982703	All Organisms → cellular organisms → Bacteria → Proteobacteria	762	Open in IMG/M
3300016294\|Ga0182041_11050132	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300016294\|Ga0182041_11174339	Not Available	699	Open in IMG/M
3300016319\|Ga0182033_12081213	Not Available	517	Open in IMG/M
3300016341\|Ga0182035_11450847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	617	Open in IMG/M
3300016357\|Ga0182032_11638879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300016387\|Ga0182040_11456988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	581	Open in IMG/M
3300016387\|Ga0182040_11946825	Not Available	504	Open in IMG/M
3300016404\|Ga0182037_11369118	Not Available	625	Open in IMG/M
3300016422\|Ga0182039_11407287	Not Available	634	Open in IMG/M
3300016445\|Ga0182038_10547671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha3_Bin2	993	Open in IMG/M
3300017970\|Ga0187783_11037860	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300017972\|Ga0187781_11038541	Not Available	600	Open in IMG/M
3300018090\|Ga0187770_10044772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3167	Open in IMG/M
3300018090\|Ga0187770_10267285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1327	Open in IMG/M
3300021560\|Ga0126371_11631392	Not Available	770	Open in IMG/M
3300027548\|Ga0209523_1022783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1231	Open in IMG/M
3300031544\|Ga0318534_10318424	Not Available	896	Open in IMG/M
3300031546\|Ga0318538_10665808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300031572\|Ga0318515_10455987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	684	Open in IMG/M
3300031573\|Ga0310915_10195562	All Organisms → cellular organisms → Bacteria → Proteobacteria	1413	Open in IMG/M
3300031679\|Ga0318561_10395573	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300031679\|Ga0318561_10799783	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031719\|Ga0306917_10153113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → unclassified Roseomonas → Roseomonas sp. JC162	1712	Open in IMG/M
3300031719\|Ga0306917_10739587	Not Available	772	Open in IMG/M
3300031744\|Ga0306918_10288494	All Organisms → cellular organisms → Bacteria → Proteobacteria	1261	Open in IMG/M
3300031744\|Ga0306918_10963084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	663	Open in IMG/M
3300031765\|Ga0318554_10189650	Not Available	1170	Open in IMG/M
3300031768\|Ga0318509_10467438	Not Available	705	Open in IMG/M
3300031777\|Ga0318543_10560629	Not Available	512	Open in IMG/M
3300031781\|Ga0318547_10989270	Not Available	526	Open in IMG/M
3300031792\|Ga0318529_10144332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300031799\|Ga0318565_10373726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	691	Open in IMG/M
3300031799\|Ga0318565_10642900	Not Available	509	Open in IMG/M
3300031805\|Ga0318497_10334389	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300031845\|Ga0318511_10526241	Not Available	548	Open in IMG/M
3300031890\|Ga0306925_10424731	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300031890\|Ga0306925_12222307	Not Available	509	Open in IMG/M
3300031890\|Ga0306925_12261324	Not Available	504	Open in IMG/M
3300031897\|Ga0318520_10152061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300031910\|Ga0306923_10155166	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300031910\|Ga0306923_10380084	Not Available	1609	Open in IMG/M
3300031910\|Ga0306923_10734224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1096	Open in IMG/M
3300031910\|Ga0306923_10937292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	946	Open in IMG/M
3300031910\|Ga0306923_11373086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300031910\|Ga0306923_11910763	Not Available	606	Open in IMG/M
3300031912\|Ga0306921_10619959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300031912\|Ga0306921_10685733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1178	Open in IMG/M
3300031912\|Ga0306921_11846903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300031912\|Ga0306921_12717523	Not Available	508	Open in IMG/M
3300031941\|Ga0310912_10782859	Not Available	737	Open in IMG/M
3300031941\|Ga0310912_11260110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	561	Open in IMG/M
3300031942\|Ga0310916_10044945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3344	Open in IMG/M
3300031945\|Ga0310913_10163684	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300031945\|Ga0310913_10975475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300031954\|Ga0306926_10264054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2132	Open in IMG/M
3300031954\|Ga0306926_10976734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300031954\|Ga0306926_11885433	Not Available	676	Open in IMG/M
3300031954\|Ga0306926_12503919	Not Available	566	Open in IMG/M
3300031954\|Ga0306926_12769483	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300032001\|Ga0306922_10768811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300032001\|Ga0306922_10801317	Not Available	985	Open in IMG/M
3300032001\|Ga0306922_11297673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300032001\|Ga0306922_11385395	Not Available	707	Open in IMG/M
3300032001\|Ga0306922_11602996	Not Available	647	Open in IMG/M
3300032035\|Ga0310911_10295109	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300032035\|Ga0310911_10393970	Not Available	801	Open in IMG/M
3300032041\|Ga0318549_10103712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1242	Open in IMG/M
3300032051\|Ga0318532_10336489	Not Available	536	Open in IMG/M
3300032054\|Ga0318570_10249053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	805	Open in IMG/M
3300032059\|Ga0318533_10663194	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300032068\|Ga0318553_10336184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	790	Open in IMG/M
3300032076\|Ga0306924_10420208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1529	Open in IMG/M
3300032076\|Ga0306924_10663218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha3_Bin2	1175	Open in IMG/M
3300032076\|Ga0306924_11893360	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300032076\|Ga0306924_12490348	Not Available	519	Open in IMG/M
3300032091\|Ga0318577_10292426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	780	Open in IMG/M
3300032091\|Ga0318577_10457853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	609	Open in IMG/M
3300032094\|Ga0318540_10374591	Not Available	688	Open in IMG/M
3300032261\|Ga0306920_100091029	Not Available	4505	Open in IMG/M
3300032261\|Ga0306920_100228867	All Organisms → cellular organisms → Bacteria → Proteobacteria	2774	Open in IMG/M
3300032261\|Ga0306920_100638616	All Organisms → cellular organisms → Bacteria → Proteobacteria	1573	Open in IMG/M
3300032261\|Ga0306920_101203550	Not Available	1094	Open in IMG/M
3300032261\|Ga0306920_101978895	Not Available	817	Open in IMG/M
3300032261\|Ga0306920_103310607	Not Available	600	Open in IMG/M
3300033289\|Ga0310914_11602886	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.35%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101298142	3300000793	Forest Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHAS
Ga0066388_1038737081	3300005332	Tropical Forest Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWLH
Ga0066388_1046115092	3300005332	Tropical Forest Soil	MEMAMNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWLHA
Ga0066388_1052930271	3300005332	Tropical Forest Soil	MNRPLAPTSGLLAAILLAVNVPTLAMDRTFQIEVEKSLKGAVPSNWWLRSSWRDQTLVV
Ga0066388_1053904331	3300005332	Tropical Forest Soil	MKRLLAPTPILLAVILQAVNTPAISADRTFQIEVENSLKETVPSNWWLHASWRDQ
Ga0066388_1055560811	3300005332	Tropical Forest Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRDQTLVVF
Ga0066388_1087010132	3300005332	Tropical Forest Soil	MKLLLALTSILLAIILLAVNTPAIAVDRTFQIEVENSLKGTVP
Ga0070713_1011068101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGT
Ga0070705_1003461564	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLLTSTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWLHASWRDQTLVVF
Ga0070699_1002699061	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLLTPTSILLTVILLAVIIPALAVDRTFQIEVENSLKGTVPSNWWLHAS
Ga0066903_1046929042	3300005764	Tropical Forest Soil	MTRLLAPTLILSAVILLAVNVPAPAVDRTFQIEIENSLKGTVPPS
Ga0066903_1091494331	3300005764	Tropical Forest Soil	MARLLAPTSNLLAVILLAMNVPALAVDRTFQTEVEN
Ga0070717_119780611	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTRLLTPTSILLTVILLAVNMPALAVDRTFQIEVENSLKGTVP
Ga0126374_106214782	3300009792	Tropical Forest Soil	MAMNRLLAAISIVLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWV
Ga0126380_108729411	3300010043	Tropical Forest Soil	MKRLLAPTPILLAVTLLAVNTPAIAVDRTFQSEVENSLKGTVPSNWW
Ga0126384_109845803	3300010046	Tropical Forest Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSL
Ga0126373_124121201	3300010048	Tropical Forest Soil	MKYLLAPTLAVILLAVNTPAIAVDRTFQIEVESSLKGTVPSNWWLHASWRDQT
Ga0126370_116976831	3300010358	Tropical Forest Soil	MAMNRLLAAISIMLAVILLVVNFPALAVDRTFQIE
Ga0126372_115545472	3300010360	Tropical Forest Soil	MEATMTRLLTLTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWQHASW
Ga0126372_116202562	3300010360	Tropical Forest Soil	MKRLLALTSILLVMILLAVNTPAIAVDRTFQIEVENSLKGTVPSNWWLHASW
Ga0126377_132389181	3300010362	Tropical Forest Soil	MKRLLAPTPILLAVTLLAVNTPAIAVDRTFQSEVENSLKGT
Ga0126379_109144903	3300010366	Tropical Forest Soil	MAMNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVE
Ga0124850_10239185	3300010863	Tropical Forest Soil	MEATMTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWLHAS
Ga0126369_126444281	3300012971	Tropical Forest Soil	MKRLLAPTPILLAVTLLAVNTPAIAVDRTFQSEVENSLKGTVPSNWWL
Ga0182036_102980071	3300016270	Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWW
Ga0182036_107021011	3300016270	Soil	MNRLLAPISIMVAVILLVMNFPALAVDRTFQIEVEN
Ga0182036_117736661	3300016270	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENS
Ga0182041_107162861	3300016294	Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENS
Ga0182041_109827031	3300016294	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRDQTLVV
Ga0182041_110501321	3300016294	Soil	MKRLISLTSILLAVTLLAVNTPAIAVDRTFQIEVENILKGTVPSNS
Ga0182041_111743392	3300016294	Soil	MARLLAPTLNLLAVILLAMNVPALAVDRTFQTEVENSLK
Ga0182033_120812132	3300016319	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGTVPSNWWLHASWRDQTLVVF
Ga0182035_114508472	3300016341	Soil	MARLLAPTSNVLAMILLAMNVPAHEVDRKFQIDVENSLKDTV
Ga0182032_116388792	3300016357	Soil	MNRLLAPISIMLAGILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRD
Ga0182040_114569881	3300016387	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWLHASW
Ga0182040_119468251	3300016387	Soil	MTRLLAPTSILLTVILLAVNVPALAVDRTFQIEVENSLKGTVPPSWWLHASWLANNFRGWRWR
Ga0182037_113691181	3300016404	Soil	MKRLLAATSIPLAMTLLAVNTPAIAVDRTFQIEVENSLKGTV
Ga0182039_114072871	3300016422	Soil	MNRLLAPISIMLAVILLAINFPALAVDPTFQVEVENS
Ga0182038_105476711	3300016445	Soil	MKRLLAATSIPLAMTLLAVNTPAIAVDRTFQIEVENS
Ga0187783_110378601	3300017970	Tropical Peatland	MQRLLAPALLLLAAILRAVNTPAAAADRSFQIEVENSLKGT
Ga0187781_110385412	3300017972	Tropical Peatland	MAHDDPTEMTMNRLLAPISITLAAIALAVNFPALAVDRTFQIEVENSLKGT
Ga0187770_100447721	3300018090	Tropical Peatland	MTRLLTPVSMLLAMILLSVNVPALAVDRTFQIEVENS
Ga0187770_102672852	3300018090	Tropical Peatland	MKHLLAPNSILLAVILAVNTPAIAVDRTFQIEVENSLKGTVPPSWWLHASWRDQ
Ga0126371_116313921	3300021560	Tropical Forest Soil	MNRLLAPISIKLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSN
Ga0209523_10227831	3300027548	Forest Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWLHA
Ga0318534_103184242	3300031544	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWREQ
Ga0318538_106658082	3300031546	Soil	VARLLAPTSILLAVILLAMNVPALAVDRTFQSEVEN
Ga0318515_104559871	3300031572	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWLHASWR
Ga0310915_101955621	3300031573	Soil	MARLLAPTSNLLAVILLAMNVPALAVDRTFQSEVENSLKGTV
Ga0318561_103955731	3300031679	Soil	MARLLAPTSKLIAVILLAMNLPALAVDRTFQNEVENSLKETV
Ga0318561_107997832	3300031679	Soil	MTRLLAPTPILLAVILLAVNVPALAVDRTFQIEVESSLKGTVPS
Ga0306917_101531131	3300031719	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSL
Ga0306917_107395871	3300031719	Soil	MKHLLAPNSILLAVILSAVNTPAIAVDRTFQIEVENSLKGTVQS
Ga0318500_100954676	3300031724	Soil	LIPDALMEATMTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWREL
Ga0306918_102884942	3300031744	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGT
Ga0306918_109630842	3300031744	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPS
Ga0318554_101896501	3300031765	Soil	PTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWRELA
Ga0318509_104674381	3300031768	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRSFQIEVENSLRGTVPS
Ga0318543_105606291	3300031777	Soil	MARLLTVTSNLLAVILLAMSVPALAVDRTFQVEVENSLKGTVPSNWWLRAS
Ga0318547_109892701	3300031781	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGTVPSNWWLHASWRDQSLVVF
Ga0318529_101443321	3300031792	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGTV
Ga0318565_103737263	3300031799	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVE
Ga0318565_106429001	3300031799	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSLRG
Ga0318497_103343891	3300031805	Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRDQT
Ga0318511_105262411	3300031845	Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRDQTL
Ga0306925_104247313	3300031890	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGTVPPSWWLHASWRDQTLVVF
Ga0306925_122223071	3300031890	Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWR
Ga0306925_122613241	3300031890	Soil	MNRLLAPISIMLAVILLAINFPALAVDRTFQVEVENSLRETVPSNWWLHASW
Ga0318520_101520612	3300031897	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIELE
Ga0306923_101551664	3300031910	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGTVPPSWWLHAS
Ga0306923_103800841	3300031910	Soil	MKRLLTPQLILLAVTMLAVNTPAIAVDRTFQIEVENSLKGTVPPSWWLHASWRDQTL
Ga0306923_107342244	3300031910	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVEN
Ga0306923_109372922	3300031910	Soil	MKRLIAPTSILLAVTLLAVNTPAIAVDRTFQIEVENILKGTVPSNWW
Ga0306923_113730861	3300031910	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIELENSLKGTVPSNWWLHASWRDQTLV
Ga0306923_119107631	3300031910	Soil	MNRLLAPISIMVAVILLVVNFPALAVDRTFQIEVE
Ga0306921_106199592	3300031912	Soil	MNRLLAPISIMLAGILLVVNFPALAVDRTFQIEVENSLRGTVPSNW
Ga0306921_106857332	3300031912	Soil	MNRLLAPISIMVAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRDQ
Ga0306921_118469031	3300031912	Soil	MARLLATSNLLAVILLAMNVPALAVDRTFQTEVENS
Ga0306921_127175231	3300031912	Soil	MKHLLAPTPILLAVILSAVNTPAIAVDRTFQIEVENSLKGTVPSNWWLHASWRNQTLV
Ga0310912_107828591	3300031941	Soil	MKRLLTPQLILLAVTMLAVNTPAIAVDRTFQIEVENS
Ga0310912_112601101	3300031941	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKG
Ga0310916_100449455	3300031942	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRSFQIEVENSL
Ga0310913_101636842	3300031945	Soil	MTRLLAPTPILLTVILLAVNVPALAVDRTFQIEVESSLKGTVPSSWWLRAS
Ga0310913_109754752	3300031945	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRDQT
Ga0306926_102640542	3300031954	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWRELA
Ga0306926_109767342	3300031954	Soil	MARLLATSNLLAVILLAMNVPALAVDRTFQTEVENSLKRT
Ga0306926_118854331	3300031954	Soil	MKHLLAPTPILLAVILSAVNTPAIAVDRTFQIEVENSLKGTVP
Ga0306926_125039191	3300031954	Soil	MTRLLAPTLNLLAVILLAVNVPALAVDRTFQIEIE
Ga0306926_127694832	3300031954	Soil	MNRLLDPISIMLAVILLVVNFPALAVDRTFQIEVENSLRGTVPSID
Ga0306922_107688111	3300032001	Soil	MARLLAPTSNLLAVILLAMNVPALAVDRTFQSEVENSLKGTVPSN
Ga0306922_108013172	3300032001	Soil	MKRLLTPQLILLAVTMLAVNTPAIAVDRTFQIEVENSLK
Ga0306922_112976732	3300032001	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRTFQIEVEN
Ga0306922_113853951	3300032001	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRSFQIEVENSLRGTVPSN
Ga0306922_116029962	3300032001	Soil	VARLLAPTSILLAVILLAMNVPALAVDRTFQSEVENSLKGTVPSNWWLR
Ga0310911_102951093	3300032035	Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRD
Ga0310911_103939701	3300032035	Soil	MARLLTLTSNLLAVILLAMSFPALAVDRTFQVEVENS
Ga0318549_101037122	3300032041	Soil	MKRLLAPTSILLAVILLAVNTPAIAVDRTFQIELENSLK
Ga0318532_103364891	3300032051	Soil	MARLLAPTSNLLAVILLAMNVPSLAVDRTFQTEVENSLKATVPSNW
Ga0318570_102490532	3300032054	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSSWWLHAS
Ga0318533_106631942	3300032059	Soil	MKRLIAPTSILLAVTLLAVNTPAIAVDRTFQIEVENILK
Ga0318553_103361843	3300032068	Soil	MTRLLTPTSILLTVILLAVNIPALAVDRTFQIEVENSLKGTVPSNWWLHASWRVPTKS
Ga0306924_104202081	3300032076	Soil	MNRLLAPISIMVAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHAS
Ga0306924_106632182	3300032076	Soil	MKRLLAATSIPLAMTLLAVNTPAIAVDRTFQIEVENSLKGTVPSN
Ga0306924_118933602	3300032076	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIELENSLKGTVPSNWWLHA
Ga0306924_124903481	3300032076	Soil	VARLLAPTSILLAVILLAMNVPALAVDRTFQSEVENSLKGTVPSNWWL
Ga0318577_102924262	3300032091	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVVNSLKGT
Ga0318577_104578531	3300032091	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENSLKGTVPSN
Ga0318540_103745911	3300032094	Soil	MARLLAPTLNLLAVILLAMNVPALAVDRTFQTEVENSLKGTVPSN
Ga0306920_1000910298	3300032261	Soil	MNRLLAPISIMLAVILLVMNFPALAVDRTFQIEVENSLRGTVPSNWWLHASWRDQTLVVF
Ga0306920_1002288675	3300032261	Soil	MNRLLAPISIMLAVILLVVNFPALAVDRSFQIEVENSLRGTVPSNWWLHASWRDQTLVVF
Ga0306920_1006386161	3300032261	Soil	MNRLLAPISIMVAVILLVVNFPALAVDRTFQIEVENSLR
Ga0306920_1012035501	3300032261	Soil	MKRLLTPQLILLAVTMLAVNTPAIAVDRTFQIEVENSLKGTVPPSWWLHA
Ga0306920_1019788951	3300032261	Soil	MKRLLAPTSILLAMILLAVNTPAIAVDRTFQIEVENNLKGTVPSNWWL
Ga0306920_1033106072	3300032261	Soil	MKRLLAPTAILLAMILLAVNTPAIAVDRTFQIEVENSLKGTVPS
Ga0310914_116028861	3300033289	Soil	MKRLIAPTSILLAVTLLAVNTPAIAVDRTFQIEVENI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079461

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences