Metagenome Family F079452

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079452
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	63 residues
Representative Sequence	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGA
Number of Associated Samples	75
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	6.96 %
% of genes from short scaffolds (< 2000 bps)	6.09 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (97.391 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (82.609 % of family members)
Environment Ontology (ENVO)	Unclassified (92.174 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (82.609 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100 1Ga0066905_1006401391 2Ga0126380_101047211 3Ga0126378_103023501 4Ga0126378_114131242 5Ga0126378_118300732 6Ga0126379_126613781 7Ga0126383_115200911 8Ga0126383_127570382 9Ga0126369_111322862 10Ga0182035_106171382 11Ga0182032_118086761 12Ga0182037_102464143 13Ga0318516_105194192 14Ga0318534_101483741 15Ga0318571_100123355 16Ga0318573_100637383 17Ga0310915_112502192 18Ga0318555_106779182 19Ga0318542_104209482 20Ga0318561_104601322 21Ga0318574_108670802 22Ga0318560_101593391 23Ga0318560_103555751 24Ga0318496_104280871 25Ga0318496_104723821 26Ga0318493_101243833 27Ga0318493_104802211 28Ga0318493_104893612 29Ga0318493_107235541 30Ga0318500_105849661 31Ga0306918_109836831 32Ga0306918_114704152 33Ga0318502_102200271 34Ga0318502_102792392 35Ga0318502_105337131 36Ga0318502_106849952 37Ga0318502_106943372 38Ga0318492_107095831 39Ga0318492_107933821 40Ga0318554_102079291 41Ga0318509_103284182 42Ga0318521_110458102 43Ga0318543_103301591 44Ga0318566_103231341 45Ga0318508_12112262 46Ga0318547_102510602 47Ga0318547_109787141 48Ga0318547_110320822 49Ga0318552_103403591 50Ga0318552_106194852 51Ga0318552_106931991 52Ga0318529_103193331 53Ga0318503_101258912 54Ga0318557_101283181 55Ga0318557_105543952 56Ga0318576_101042483 57Ga0318550_104345731 58Ga0318523_100794104 59Ga0318523_101114683 60Ga0318523_102623111 61Ga0318565_103366512 62Ga0318497_101217391 63Ga0318497_103864532 64Ga0318497_103978791 65Ga0318567_108375932 66Ga0318564_105177381 67Ga0318517_104208921 68Ga0318517_104247182 69Ga0318511_100555751 70Ga0318511_104003221 71Ga0318527_103629291 72Ga0318495_101929882 73Ga0318551_102939042 74Ga0318520_102253832 75Ga0318520_102445361 76Ga0306923_107027912 77Ga0306921_116591281 78Ga0310912_106293122 79Ga0310909_108482272 80Ga0318531_102247772 81Ga0306922_101379454 82Ga0318563_100148465 83Ga0318563_103833191 84Ga0318507_101247811 85Ga0318507_103574002 86Ga0318559_100518711 87Ga0318559_102575192 88Ga0318559_106179572 89Ga0318549_104256792 90Ga0318556_100474431 91Ga0318556_104159832 92Ga0318558_106002832 93Ga0318506_101246631 94Ga0318506_102759311 95Ga0318570_102273022 96Ga0318570_102457101 97Ga0318505_101638942 98Ga0318510_101260272 99Ga0318513_100739463 100Ga0318514_107336672 101Ga0318524_103449792 102Ga0318524_107815041 103Ga0318553_100911501 104Ga0318553_105952552 105Ga0306924_104886633 106Ga0306924_116450561 107Ga0318525_103137582 108Ga0318525_104841202 109Ga0318525_107349821 110Ga0318518_101824901 111Ga0318518_104569212 112Ga0306920_1025119761 113Ga0310914_117249841 114Ga0318519_103626372 115Ga0318519_107774321
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100 1Ga0066905_1006401391 2Ga0126380_101047211 3Ga0126378_103023501 4Ga0126378_118300732 5Ga0318573_100637383 6Ga0318574_108670802 7Ga0318496_104723821 8Ga0318502_106943372 9Ga0318492_107933821 10Ga0318508_12112262 11Ga0318547_110320822 12Ga0318552_106194852 13Ga0318564_105177381 14Ga0318563_100148465 15Ga0318559_100518711 16Ga0318514_107336672
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60 1Ga0318520_102253832 2Ga0126378_103023501 3Ga0126378_118300732 4Ga0126383_115200911 5Ga0126369_111322862 6Ga0182032_118086761 7Ga0318573_100637383 8Ga0318493_104893612 9Ga0318500_105849661 10Ga0318502_106943372 11Ga0318566_103231341 12Ga0318508_12112262 13Ga0318497_103864532 14Ga0318567_108375932 15Ga0318564_105177381 16Ga0318511_100555751 17Ga0306923_107027912 18Ga0318507_101247811 19Ga0318559_102575192 20Ga0318553_105952552 21Ga0318519_103626372
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13732	DUF4162	93.91
PF00005	ABC_tran	4.35

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	2.61 %
Unclassified	root	N/A	97.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	2.61 %
Unclassified	root	N/A	97.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.61 %
Unclassified	root	N/A	97.39 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.61 %
Unclassified	root	N/A	97.39 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.87 %
Unclassified	root	N/A	97.39 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.87 %
Unclassified	root	N/A	97.39 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300010043\|Ga0126380_10104721	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1708	Open in IMG/M
3300010361\|Ga0126378_10302350	Not Available	1703	Open in IMG/M
3300016404\|Ga0182037_10246414	Not Available	1412	Open in IMG/M
3300031564\|Ga0318573_10063738	Not Available	1827	Open in IMG/M
3300031805\|Ga0318497_10121739	Not Available	1413	Open in IMG/M
3300032043\|Ga0318556_10047443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2066	Open in IMG/M
3300032065\|Ga0318513_10073946	Not Available	1564	Open in IMG/M
3300032076\|Ga0306924_10488663	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1403	Open in IMG/M

Showing 1 to 8 of 8 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.13%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	92.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	82.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M

Showing 1 to 10 of 75 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066905_1006401391	3300005713	Tropical Forest Soil	MSAVPAVRLVAGREVRERGRSKVLWIGTSVLLLGVVAAIVVPAVLGHHGQQT
Ga0126380_101047211	3300010043	Tropical Forest Soil	MSAVPAVRLVAGREVRERGRSKVLWIGTSVLLLGVVAAIVVPAVLGHHGQQTFRVGTVGAVPRGLASSVISDAAALGGAARIRAV
Ga0126378_103023501	3300010361	Tropical Forest Soil	MSAVSAVRLVAVRELRERGRSKAFWVGTSVLLLGVVAAIIVPAMLGRHGPRTFEVGTV
Ga0126378_114131242	3300010361	Tropical Forest Soil	MTAASAVRLVAGREVRERGRCKVFWVGTSVLLAGVVAAIVVPAVLGHHGQQTFRV
Ga0126378_118300732	3300010361	Tropical Forest Soil	MSAASAVRLVAGREVRERGRSKVFWVGTSVLLLAVVAAIIVPAVLGHHRQQTFRVGTVGAAPPGLSSSV
Ga0126379_126613781	3300010366	Tropical Forest Soil	MSAVSAVRLVAGREVRERGRSKAFWVGTSVLLAGVVAAIVVPAVLGHHGQQTFR
Ga0126383_115200911	3300010398	Tropical Forest Soil	MSAASAVRLIAGRELRERGRSKTFWIGTSVVLLGIVAAIVVPAMFGHHGQQTFRVGTVGAAPPGLTSSVTADAAALGGSAHI
Ga0126383_127570382	3300010398	Tropical Forest Soil	MSAVSAVRLVAGREMRERGRSKAFWVGTSVLLLGVVAAIVVPAVLGHH*
Ga0126369_111322862	3300012971	Tropical Forest Soil	MSAASAVRLVAGRELRERGRSKAFRIGTSVLLAGVAAAIVVPAVAGHHGQQTFRVGTVG
Ga0182035_106171382	3300016341	Soil	VTAASAVRLVAGREVRERGRSRVFWVGTAVVLAGVAAAIVVPAVLGHHGQ
Ga0182032_118086761	3300016357	Soil	MRASAVRLVAGREVRERGRSKVFWVGTSVLLAGIVAAVVVPAVLGHHRQQTFRVGTVGAAPPGLT
Ga0182037_102464143	3300016404	Soil	MRASAVRLVAGREVRERGRSKVFWVGTSVVLAGIVAAVVVPAVLGHHRQQTFRVGTVGAAPPGLSSSV
Ga0318516_105194192	3300031543	Soil	VSAASAVRLVAGREVRERGRSRVFWVGTSVLLAGVAAAIVVPAVLGHH
Ga0318534_101483741	3300031544	Soil	MSAASAVRLVAGREVRERGRSKVFWAGTSVLLLGVAAAIVVPAVLDHHGQQTFRVGTVGAAPPGLTSSVTADAAALGGR
Ga0318571_100123355	3300031549	Soil	MRAVSAVRLVAVRELRERGRSKAFWAGTIVLLVGVVAATIVPAMLGHHGPRTFQVGTVRAPGGLASS
Ga0318573_100637383	3300031564	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPRTFQVGTVGAPPGLASSVISDAAA
Ga0310915_112502192	3300031573	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFQVG
Ga0318555_106779182	3300031640	Soil	MRASAVRLVAGREVRERGRSKVFWVGTSVVLAGIVAAVVVPAVLGHHRQQTFRVGTVGAAPPGLSSSVTADAAALGGT
Ga0318542_104209482	3300031668	Soil	MSAAAAVRLVAGREVRERGRSRVFWVGTSVVLAGVAAAIVVPAMFGHHGQQTFRVGTVGAVPPG
Ga0318561_104601322	3300031679	Soil	MSAASAVRLVAGREVRERGRSKGFWIATSLLLLGVTAAIVVPAVLGHH
Ga0318574_108670802	3300031680	Soil	MIAASAIRLVAARELRERGRSKAFWIGTSVVLLGVVAAIVVPAMFGRH
Ga0318560_101593391	3300031682	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPRTFQVGTVGAPPGLASSVISDAA
Ga0318560_103555751	3300031682	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFQVGTVGAAPPG
Ga0318496_104280871	3300031713	Soil	MSAASAVRLVAGREVRERGRSKVFWAGTSVLLAGVVAAIVVPAVLGHHGQQTFRVGTVGAAPPGLTSSVTADAAAL
Ga0318496_104723821	3300031713	Soil	MRASAVRLVAGREVRERGRSKVFWVGTSVVLAGIVAAVVVPAVLGHHRQQTFRVGTVGAAPPGLSSSVTADAAALGGTARL
Ga0318493_101243833	3300031723	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAAPPGLVSSVTADAAALGG
Ga0318493_104802211	3300031723	Soil	MSAAPAVRLVAGREVRERGRSRVFWVGTAVVLAGVAAAIVVPAVLGHHGQQAFRVGTLGAAPPG
Ga0318493_104893612	3300031723	Soil	MSAASAVRLVAGREVRERGRSKGFWIATSLLLLGVTAAIVVPAVLGHHRQQTFRVG
Ga0318493_107235541	3300031723	Soil	MSAAAAVRLVAAREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTFRVGTVGAAPPGLT
Ga0318500_105849661	3300031724	Soil	MRASAVRLVAGRELRDRGRSKGFWIGTSVWLLGIVAAIVVPAMFGHHGQQTFRVGTVGAAPPGLSSSV
Ga0306918_109836831	3300031744	Soil	MSAVPAVRLVAGREVRERGRSKVFWIGTSVLLLGVAAAIVVPVLGHHGQ
Ga0306918_114704152	3300031744	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAAPPGLVSSVTADA
Ga0318502_102200271	3300031747	Soil	MSAMSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGA
Ga0318502_102792392	3300031747	Soil	MSAAAAVRLVAGREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTFRVGTVGAAPPGLT
Ga0318502_105337131	3300031747	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPRTFQVGTVGA
Ga0318502_106849952	3300031747	Soil	MSAVPAVRLVAGREVRERGRSKVFWIGTSVLLLGVAAAIVVPVLGHHGQQTFR
Ga0318502_106943372	3300031747	Soil	MSPAWTIRLVAARELRERGRSKAFWIGTSVLVLGVVAAIVVSAIFGHHGEQTFRVGTVGAAPPGLTSSVIA
Ga0318492_107095831	3300031748	Soil	MSAAAAVRLVAAREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTF
Ga0318492_107933821	3300031748	Soil	MRASAVRLVAGRELRERGRSKAFWMGTSVWLLGIVAAIVVPTVLGHHGQQTFRVG
Ga0318554_102079291	3300031765	Soil	MSAAAAVRLVAAREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTFRVGTVGAAPPGLTSSV
Ga0318509_103284182	3300031768	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPRTFQVGTVGAPPGLASSVISD
Ga0318521_110458102	3300031770	Soil	VSAVPAVRLVAGREVRERGRSRVFWAGTSVVLAGVVAAIVVPAVLGHHG
Ga0318543_103301591	3300031777	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPR
Ga0318566_103231341	3300031779	Soil	MSAASTVRLVAGRELRERGRSKAFWVGTSVLLVGVGAAIIVPAMLSHHGPRTFQVGMVGAPGGLASSVI
Ga0318508_12112262	3300031780	Soil	MSAAPTVRLVAGRELRERGRSKAFWITTAVLLLGIVAAIVIPATLSHHGVRTFQ
Ga0318547_102510602	3300031781	Soil	MSAAAAVRLVAGREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTFRVGTVGAAPPG
Ga0318547_109787141	3300031781	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPRTFQVGTVGAPPGLASSVISDAAALGGRANV
Ga0318547_110320822	3300031781	Soil	MSAAPAVRLVAGREVRERGRSRVFWVGTAVVLAGVAAAIVVP
Ga0318552_103403591	3300031782	Soil	MIAASAIRLVAARELRERGRSKAFWIGTSVVRLGVVAAIVVPAMFGRHGQQ
Ga0318552_106194852	3300031782	Soil	MSAASTIRLVAGREVRERGRSKAFWIGTCALLFGVIAVIVVPAKLGQHGQRT
Ga0318552_106931991	3300031782	Soil	VSAVPAVRLVAGREVRERGRSRVFWAGTSVVLAGVVAAIVVPAVLGH
Ga0318529_103193331	3300031792	Soil	MRASAVRLVAGRELRDRGRSKGFWIGTSVWLLGIVAAIVVPAMFGHHGQQTFRVGTVGAAPPGLSSSVSADAAALPPR
Ga0318503_101258912	3300031794	Soil	MSAAPTVRLVAGRELRERGRSKAFWITTAVLLLGIVAAIVIPATLSHHEV
Ga0318557_101283181	3300031795	Soil	MSAMSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAAPPGLVSSVTADAAALGGRAQIR
Ga0318557_105543952	3300031795	Soil	MSAVPAVRLVAGREVRERGRSKVFWIGTSVLLLGVAAAIVVPVLGHHGQQTF
Ga0318576_101042483	3300031796	Soil	MSAASTIRLVAGREVRERGRSKAFWIGTCALLFGVIAVIVVPAKLGQHGQRTFQV
Ga0318550_104345731	3300031797	Soil	MSAAPAVRLVAGREVRERGRSKVFWAGTSVLLAGVVAAIVVPAVLGHHGQQTFRVGTLGAAPAGLRSSVTADAA
Ga0318523_100794104	3300031798	Soil	MSAASAVRLVAGREVRERGRSKGFWVGTSVWLLGIVAAIVVPAILGH
Ga0318523_101114683	3300031798	Soil	MSAASAVRLVAGREVRERGRSRVFWVGTSVLLVGVVAAIVVPAVLGHHGQQTFRVGTLGAAPAGLRS
Ga0318523_102623111	3300031798	Soil	MSAAPAVRLVAGREVRERGRSKVFWVGTAVVLAGVAAAIVVPAVLGHHGQQTFRVGTLGAAPAGLAASVTAD
Ga0318565_103366512	3300031799	Soil	VTAASAVRLVAGREVRERGRSRVFWVGTSVVLAGVAAAIVVPAVLGHHG
Ga0318497_101217391	3300031805	Soil	MRASAVRLVAGRELRERGRSKAFWMGTSVWLLGIVAAIVVPTVLGHHGQQTFRVGTVGAAPP
Ga0318497_103864532	3300031805	Soil	MSAAPAVRLVAGREVRERGRSRVFWVGTAVVLAGVAAAIVVPAVLGHHGQQTFRVGTLGAAPAGLAASVTAD
Ga0318497_103978791	3300031805	Soil	MSAASAVRLVAGREVRERGRSKGFWIATSLLLLGVTAAIVVPAVLGHHR
Ga0318567_108375932	3300031821	Soil	VSAVPAVRLVAGREVRERGRSRVFWAGTSVVLAGVVAAIVVPAVLGHHGQQTFRVGTVGAAPPGLTS
Ga0318564_105177381	3300031831	Soil	MIAASAIRLVAARELRERGRSKAFWIGTSVVLLGVVAAIVVPAMFGRHGQQAFRVGTVGAAPPGLASSSSRMPRPW
Ga0318517_104208921	3300031835	Soil	MSAASTVRLVAGRELRERGRSKAFWVGTSVLLVGVGAAIIVPAMLSHHGPRTFQ
Ga0318517_104247182	3300031835	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPRTFQVG
Ga0318511_100555751	3300031845	Soil	MSAAPTVRLVAGRELRERGRSKAFWITTAVLLLGIVAAIVVPEMLGRHG
Ga0318511_104003221	3300031845	Soil	MSAAPAVRLVAGREVRERGRSRVFWVGTAVVLAGVAAAIVVPAVLGHHGQQAFRVGTLGAAPAGLAASVT
Ga0318527_103629291	3300031859	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAAPPGLVSSVTADAAALGGRAQI
Ga0318495_101929882	3300031860	Soil	MSAVPAVRLVAGREVRERGRSKVFWIGTSVLLLGVAAAIVVPVLGHHGQQTFRV
Ga0318551_102939042	3300031896	Soil	MRASAVRLVAGRELRDRGRSKGFWIGTSVWLLGIVAAIVVPAMFGHHGQQTFRVGTVGAAPPGLSSSVSADAA
Ga0318520_102253832	3300031897	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGA
Ga0318520_102445361	3300031897	Soil	MSAAAAVHLVAGREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTF
Ga0306923_107027912	3300031910	Soil	MSAAAAVRLVAAREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTFRVGTVGAAPPGLTSSVIADAAALGGTAHI
Ga0306921_116591281	3300031912	Soil	VSAASAVRLVAGREVRERGRSRVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRV
Ga0310912_106293122	3300031941	Soil	MSAMSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFQVGTVGAATPGLVSSV
Ga0310909_108482272	3300031947	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTV
Ga0318531_102247772	3300031981	Soil	MSAASTVRLIATRELRERRRSKAFWVGTSVLLLGVVAAIVVPAMLGHHGPRTFQVGTVGAPPGLASSVISDAAALGG
Ga0306922_101379454	3300032001	Soil	MSAMSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAAPP
Ga0318563_100148465	3300032009	Soil	MRAVSAVRLVAVRELRERGRSKAFWAGTIVLLVGVVAATIVPAMLGHHGPRTFQVGTVRAPGGLASSVISDAAALGGRAHVRAMGSAI
Ga0318563_103833191	3300032009	Soil	MRASAVRLVAGRELRERGRSKAFWMGTSVWLLGIVAAIVVPTVLGHHGQQTFRVGTVGAAPPGLT
Ga0318507_101247811	3300032025	Soil	MSSASTIRLLAGREVRERGRSKAFWIGTCALLFGVIAVIVVPAKLGQHGQRTFQVGTVGAVPG
Ga0318507_103574002	3300032025	Soil	MSAVSAVRLVAGREVRERGRSRVFWVGTSVLLVGVVAAIVVPAVLGHHGQQTFRVGTLGAAPAGLRSSVTA
Ga0318559_100518711	3300032039	Soil	MSPAWTIRLVAARELRERGRSKAFWIGTSVLVLGVVAAIVVSAIFGHHGEQTFRVGTVGAAPPGLTSSVIADAAALGGGARVRVIGSVGGPLRAVHPCPR
Ga0318559_102575192	3300032039	Soil	MSAASAVRLVAGREVRERGRSKGFWVGTSVWLLGIVAAIVVPAILGHHS
Ga0318559_106179572	3300032039	Soil	MSAAAAVRLVAAREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTFRVGTVGAAPPG
Ga0318549_104256792	3300032041	Soil	MSAASAVRLVAGREVRERGRSKVFWVGTSVVLAGVAAAIVVPAVLGHHGQQTFRVG
Ga0318556_100474431	3300032043	Soil	MRAVSAVRLVAVRELRERGRSKAFWAGTIVLLVGVVAATIVPAMLGHHGPRTFQVGTV
Ga0318556_104159832	3300032043	Soil	MRASAVRLVAGRELRDRGRSKGFWIGTSVWLLGIVAAIVVPAMFG
Ga0318558_106002832	3300032044	Soil	MSAAAAVHLVAGREVRERGRSKVFWVGTSVLLAGVVAAIVVPAMLGHYRQQTFRVGTVGAAPPGLTSSVIADAAALGGTAHI
Ga0318506_101246631	3300032052	Soil	MSAMSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGTAPPGLVSSVTADAAALGGRAQ
Ga0318506_102759311	3300032052	Soil	MSAAAAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTAGAAPPGLASSVTADA
Ga0318570_102273022	3300032054	Soil	MSAASTVRLVAGRELRERGRSKAFWVGTSVLLVGVGAAIIVPAMLSHHGPRTFQVGMVGA
Ga0318570_102457101	3300032054	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVG
Ga0318505_101638942	3300032060	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAAPPGLVSSVTADAAALGGRAQIRA
Ga0318510_101260272	3300032064	Soil	MSAASAVRLVAGREVRERGRSRVFWVGTSVLLVGVVAAIVVPAVLGHHGQQTFRVGTLG
Ga0318513_100739463	3300032065	Soil	MSAASTIRLVAGREVRERGRSKAFWIGTCALLFGVIAVIVVPAKLGQHGQRTFQVGTVGA
Ga0318514_107336672	3300032066	Soil	MSAAPAVRLVAGREVRERGRSRVFWVGTAVVLAGVAAAIVVPAVLGHHGQQTFRVGTLGA
Ga0318524_103449792	3300032067	Soil	MSAASTVRLVAGRELRERGRSKAFWVGTSVLLVGVGAAIIVPAMLSHHGPRTFQVGMVGAPGGLASSV
Ga0318524_107815041	3300032067	Soil	MRASAVRLVAGREVRERGRSKVFWVGTSVVLAGIVAAVVVPAVLGHHRQQTFRVGTVGAAPPGLSSLVTADAAALGGRARVRAIGSA
Ga0318553_100911501	3300032068	Soil	MRAVSAVRLVAVRELRERGRSKAFWAGTIVLLVGVVAATIVPAMLGHHGPR
Ga0318553_105952552	3300032068	Soil	MRASAVRLVAGRELRERGRSKAFWMGTSVWLLGIVAAIVVPTVLGHHGQQTFRVGTVGAAPPGLTPSLTADAAALGGRASVR
Ga0306924_104886633	3300032076	Soil	MSAASAVRLVAGREVRERGRSRVFWVGTSVLLVGVVAAIVVPAVLGHHGQQTFRVGTL
Ga0306924_116450561	3300032076	Soil	MSPAWTIRLVAARELRERGRSKAFWIGTSVLVLGVVAAIVVSAIFGHH
Ga0318525_103137582	3300032089	Soil	MSAASTIRLVAGREVRERGRSKAFWIGTCALLFGVIAVIVVPAKLGQHG
Ga0318525_104841202	3300032089	Soil	MSAAPAVRLVAGREVRERGRSRVFWVGTAVVLAGVAAAIVVPAVLGHHGQQTFRVGTLG
Ga0318525_107349821	3300032089	Soil	MSPAWTIRLVAARELRERGRSKAFWIGTSVLVLGVVAAIVVSAIFGRH
Ga0318518_101824901	3300032090	Soil	MSAASTIRLVAGREVRERGRSKAFWIGTCALLFGVIAVIVVPAKLGQHGQ
Ga0318518_104569212	3300032090	Soil	MRASAVRLVAGREVRERGRSKVFWVGTSVVLAGIVAAVVVPAVLGHHRQQTFRVGTVGAAPPGLSSSVTADAAALGG
Ga0306920_1025119761	3300032261	Soil	VTAASAVRLVAGREVRERGRSRVFWVGTSVVLAGVAAAIVVPAVLGHHGQQTFRVGTAGAAP
Ga0310914_117249841	3300033289	Soil	MSAVSAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAAP
Ga0318519_103626372	3300033290	Soil	MRAVSAVRLVAVRELRERGRSKAFWAGTIVLLVGVVAATIVPAMLGHHGPRTFQVGTVRA
Ga0318519_107774321	3300033290	Soil	MSAAAAVRLVAGREVRERGRSKVFWVGTSVLLAGVAAAIVVPAVLGHHGQQTFRVGTVGAVPPGLSSSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters