Metagenome Family F079449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079449
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	56 residues
Representative Sequence	MTDEQIERSIELIKEMLAQREAGANAKVIEGEAEVVPSLPAPGSGGTKMPK
Number of Associated Samples	57
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.04 %
% of genes near scaffold ends (potentially truncated)	76.52 %
% of genes from short scaffolds (< 2000 bps)	93.91 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.652 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (34.783 % of family members)
Environment Ontology (ENVO)	Unclassified (58.261 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.85% β-sheet: 0.00% Coil/Unstructured: 72.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00589	Phage_integrase	40.00
PF00239	Resolvase	9.57
PF02518	HATPase_c	1.74
PF03401	TctC	0.87
PF00248	Aldo_ket_red	0.87
PF04324	Fer2_BFD	0.87
PF12697	Abhydrolase_6	0.87
PF04392	ABC_sub_bind	0.87
PF00561	Abhydrolase_1	0.87
PF12849	PBP_like_2	0.87
PF07687	M20_dimer	0.87
PF13185	GAF_2	0.87
PF00226	DnaJ	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	9.57
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	9.57
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.87
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.35 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.48 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.87 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	10.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.48 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	6.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	3.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.48 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.87 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	6.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	3.48 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.61 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.87 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	6.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	3.48 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.87 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.87 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	6.09 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.35 %
Paraburkholderia youngii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	3.48 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.87 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.87 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.87 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103978974	Not Available	508	Open in IMG/M
3300004267\|Ga0066396_10011275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1075	Open in IMG/M
3300005332\|Ga0066388_100806677	Not Available	1530	Open in IMG/M
3300005332\|Ga0066388_100942447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	1435	Open in IMG/M
3300005332\|Ga0066388_101610388	All Organisms → cellular organisms → Bacteria → Proteobacteria	1143	Open in IMG/M
3300005332\|Ga0066388_101643013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1133	Open in IMG/M
3300005332\|Ga0066388_101893433	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300005332\|Ga0066388_102169628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1001	Open in IMG/M
3300005332\|Ga0066388_105340762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	651	Open in IMG/M
3300005332\|Ga0066388_107472576	Not Available	548	Open in IMG/M
3300005332\|Ga0066388_107678443	Not Available	540	Open in IMG/M
3300005332\|Ga0066388_108345173	Not Available	516	Open in IMG/M
3300005332\|Ga0066388_108518459	Not Available	510	Open in IMG/M
3300005439\|Ga0070711_102016671	Not Available	508	Open in IMG/M
3300005713\|Ga0066905_102189320	Not Available	515	Open in IMG/M
3300005713\|Ga0066905_102196697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	515	Open in IMG/M
3300005764\|Ga0066903_100793198	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300005764\|Ga0066903_101167556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1426	Open in IMG/M
3300005764\|Ga0066903_101328217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1345	Open in IMG/M
3300005764\|Ga0066903_101414913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1307	Open in IMG/M
3300005764\|Ga0066903_101421825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	1304	Open in IMG/M
3300005764\|Ga0066903_101632060	Not Available	1224	Open in IMG/M
3300005764\|Ga0066903_102204849	Not Available	1062	Open in IMG/M
3300005764\|Ga0066903_102427216	Not Available	1014	Open in IMG/M
3300005764\|Ga0066903_102853743	Not Available	937	Open in IMG/M
3300005764\|Ga0066903_103186538	Not Available	887	Open in IMG/M
3300005764\|Ga0066903_104289269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300005764\|Ga0066903_104883438	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005764\|Ga0066903_105011210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	702	Open in IMG/M
3300005764\|Ga0066903_105013688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	702	Open in IMG/M
3300005764\|Ga0066903_105448364	Not Available	671	Open in IMG/M
3300005764\|Ga0066903_106068435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	632	Open in IMG/M
3300005764\|Ga0066903_106531776	Not Available	607	Open in IMG/M
3300005764\|Ga0066903_108051211	Not Available	540	Open in IMG/M
3300005764\|Ga0066903_108153793	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005764\|Ga0066903_108227163	Not Available	534	Open in IMG/M
3300005764\|Ga0066903_108368024	Not Available	528	Open in IMG/M
3300005764\|Ga0066903_109006843	Not Available	505	Open in IMG/M
3300010046\|Ga0126384_10718340	Not Available	887	Open in IMG/M
3300010359\|Ga0126376_10202312	All Organisms → cellular organisms → Bacteria	1647	Open in IMG/M
3300010359\|Ga0126376_11286402	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300010359\|Ga0126376_12142980	Not Available	603	Open in IMG/M
3300010360\|Ga0126372_12261800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	593	Open in IMG/M
3300010360\|Ga0126372_12438817	Not Available	574	Open in IMG/M
3300010361\|Ga0126378_10877028	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300010361\|Ga0126378_11578159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300010361\|Ga0126378_11730066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300010362\|Ga0126377_10825084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300010362\|Ga0126377_11533708	Not Available	740	Open in IMG/M
3300010366\|Ga0126379_10146574	Not Available	2192	Open in IMG/M
3300010366\|Ga0126379_10861396	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300010376\|Ga0126381_100281158	All Organisms → cellular organisms → Bacteria	2270	Open in IMG/M
3300010376\|Ga0126381_100514327	Not Available	1691	Open in IMG/M
3300010376\|Ga0126381_101375431	Not Available	1020	Open in IMG/M
3300010376\|Ga0126381_102190426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300010376\|Ga0126381_103247489	Not Available	642	Open in IMG/M
3300010376\|Ga0126381_104718317	Not Available	525	Open in IMG/M
3300010398\|Ga0126383_11904303	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300010868\|Ga0124844_1079022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1226	Open in IMG/M
3300012202\|Ga0137363_11147336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	661	Open in IMG/M
3300012948\|Ga0126375_11299596	Not Available	611	Open in IMG/M
3300012971\|Ga0126369_10908246	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300012971\|Ga0126369_11365254	Not Available	799	Open in IMG/M
3300012971\|Ga0126369_12297388	Not Available	626	Open in IMG/M
3300016294\|Ga0182041_10440860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1117	Open in IMG/M
3300016371\|Ga0182034_11977392	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300016371\|Ga0182034_12019064	Not Available	510	Open in IMG/M
3300016404\|Ga0182037_10927341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	756	Open in IMG/M
3300016422\|Ga0182039_10977842	Not Available	758	Open in IMG/M
3300016422\|Ga0182039_11825586	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300016422\|Ga0182039_12211673	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300021560\|Ga0126371_13174910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	556	Open in IMG/M
3300025939\|Ga0207665_11237891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	595	Open in IMG/M
3300027527\|Ga0209684_1033296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia youngii	788	Open in IMG/M
3300027527\|Ga0209684_1076608	Not Available	522	Open in IMG/M
3300027874\|Ga0209465_10018513	Not Available	3191	Open in IMG/M
3300031545\|Ga0318541_10146219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1295	Open in IMG/M
3300031549\|Ga0318571_10175291	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031572\|Ga0318515_10641957	Not Available	563	Open in IMG/M
3300031573\|Ga0310915_10465106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	899	Open in IMG/M
3300031573\|Ga0310915_10756710	Not Available	684	Open in IMG/M
3300031573\|Ga0310915_11069720	Not Available	561	Open in IMG/M
3300031713\|Ga0318496_10756533	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300031719\|Ga0306917_10694896	Not Available	799	Open in IMG/M
3300031736\|Ga0318501_10145607	Not Available	1216	Open in IMG/M
3300031744\|Ga0306918_11138899	Not Available	603	Open in IMG/M
3300031765\|Ga0318554_10769776	Not Available	539	Open in IMG/M
3300031768\|Ga0318509_10797368	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031771\|Ga0318546_10139683	Not Available	1625	Open in IMG/M
3300031779\|Ga0318566_10660895	Not Available	507	Open in IMG/M
3300031796\|Ga0318576_10306019	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031821\|Ga0318567_10836214	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300031833\|Ga0310917_10319165	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300031833\|Ga0310917_10550648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	784	Open in IMG/M
3300031846\|Ga0318512_10045056	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300031846\|Ga0318512_10641415	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031880\|Ga0318544_10236543	Not Available	706	Open in IMG/M
3300031890\|Ga0306925_10995330	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300031912\|Ga0306921_10266210	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300031912\|Ga0306921_10760047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1110	Open in IMG/M
3300031941\|Ga0310912_10904091	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031946\|Ga0310910_10611498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	864	Open in IMG/M
3300031947\|Ga0310909_10712553	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300031959\|Ga0318530_10180868	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300032001\|Ga0306922_10334776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1624	Open in IMG/M
3300032001\|Ga0306922_10414714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1441	Open in IMG/M
3300032039\|Ga0318559_10482890	Not Available	578	Open in IMG/M
3300032054\|Ga0318570_10416996	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300032060\|Ga0318505_10545121	Not Available	546	Open in IMG/M
3300032091\|Ga0318577_10452381	Not Available	613	Open in IMG/M
3300032261\|Ga0306920_100611194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1612	Open in IMG/M
3300032261\|Ga0306920_104226444	Not Available	517	Open in IMG/M
3300033289\|Ga0310914_10139885	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.48%
Loam	Environmental → Terrestrial → Soil → Loam	36.52%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	34.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	34.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	23.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1039789741	3300000956	Soil	MEHSGGVKAMTDEQLERSLEVIKALIAERDAGAGAKVIEGEAEVVPSLPAPCSGGTKMPKA*
Ga0066396_100112752	3300004267	Tropical Forest Soil	RSLELIEEMIAKRDAAANARVIEGEAEVVPSLPAPGSLPAPGSGGTKMPEA*
Ga0066388_1008066771	3300005332	Tropical Forest Soil	LEHSGGVKAMTDEQLERSIEILKELIAKRDAAASAKVIEGEAEVAQSLPAPGSGGTKMPKS*
Ga0066388_1009424475	3300005332	Tropical Forest Soil	LEHTGGVKAMTDEQLERGIEILQELIAKRDADANAKVIEGEAEVVPSLTAPGSGGTKTPKA*
Ga0066388_1016103882	3300005332	Tropical Forest Soil	MTDEQLERSIELIQEMIAKRDAGLNAKVIEGEAEVVPSLPVPGSGGTKMPKA*
Ga0066388_1016430131	3300005332	Tropical Forest Soil	DEQLERGIELIKEMIAKREAGANAKVIEGEADVVPSLPAPRSGGTKMPSSNVSLSKSP*
Ga0066388_1018934332	3300005332	Tropical Forest Soil	MKLEHSGGVKAMSEEQLERTLAYIEEQIAKRDAGANAKVIEGEAEVVASLPAPGSGGTMPKA*
Ga0066388_1021696281	3300005332	Tropical Forest Soil	MSDEEIERAIELIKAMLAEREAGANAKVIKGEAEVAPSLPAPGSGDTKMPED*
Ga0066388_1053407621	3300005332	Tropical Forest Soil	REHKVEHSNAIKDMTDEQLDRAIELIEEAIAKRDAGAKVIEGEAELVPSLPAPGSGGTKMPKA*
Ga0066388_1074725762	3300005332	Tropical Forest Soil	GVKAMTDEQLERGIELIKEMIAKRDAGANAKVIEGEAEVVPSLPAPGSGGTKMPC*
Ga0066388_1076784431	3300005332	Tropical Forest Soil	EHSNAIKDMTTEQIERSIEYIKEQLAQREAGSNAKVIEGEAEVVPSLPAPGSGGTKMPKAKVSLSKSP*
Ga0066388_1083451731	3300005332	Tropical Forest Soil	RSIEFIKEMIAKRDAAANAKVIEGEAEVVPSLPAPGSGGTRCPRPKVSLSKSP*
Ga0066388_1085184591	3300005332	Tropical Forest Soil	GGVKAMTDEQLERSLEVLKELIAQRDAGASAKVIEGEAEVAPSLPAPGSGGTKMPKA*
Ga0070711_1020166712	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	KVEHSGGVKAMTDEQLERGIELIQEMLAQREAGVNAKVIEGEAEVVPSLPAPGSGGTKKPKV*
Ga0066905_1021893201	3300005713	Tropical Forest Soil	EMKLEHSGGVKAMTDEQIEGAIAAIEAWMAAQKAGEGAKVIEGEAEVVPSLPAPGSGGTKMPKA*
Ga0066905_1021966971	3300005713	Tropical Forest Soil	HSNPIKDMTDEQLERTFDILQEMIAKRDAATNAKVIEGEAEVVPSLPPPGSGGTKMPKA*
Ga0066903_1007931981	3300005764	Tropical Forest Soil	MTDEQLERSIELIQEMIAKRDAGLNAKVIEGEAEVVPSLPVPGSGGT
Ga0066903_1011675564	3300005764	Tropical Forest Soil	LEHSGGIKAMTDEQIERSIEIIKEILAQREAAANAKVIEGEAEVVPSLPAPGSGGTKMPKANVSLSKSP*
Ga0066903_1013282171	3300005764	Tropical Forest Soil	EMKLEHSGGVKAMTDEQLERSIEILKEMIAQRDAAASAKVIEGEVEVVQSLPAPASGGAKPPKS*
Ga0066903_1014149133	3300005764	Tropical Forest Soil	MSLYGGVKAMTDEQLEQGIELIKQMIAERDAAANAKVIEGEAEVVPPGSGGTEMPKV*
Ga0066903_1014218251	3300005764	Tropical Forest Soil	SIELIQEMIAKRDAGLNAKVIEGEAEVVPSLPVPGSGGTKMPKA*
Ga0066903_1016320601	3300005764	Tropical Forest Soil	VKAMTDEQLERGIEILQELIAKRDADANAKVIEGEAEVVPSLPAPGSGGAKPPKS*
Ga0066903_1022048492	3300005764	Tropical Forest Soil	MTDEQLERGIEIIKELIAKRDAAASAKVILGEAGVVPSLPAPGSGGTKMAKP*
Ga0066903_1024272161	3300005764	Tropical Forest Soil	EHSGGVKAMSDEQLARSIEIIEEMIAQRDAAANAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0066903_1028537431	3300005764	Tropical Forest Soil	LKFEHSGGVKAMTDEQLERSLEVLKELIAQRDAGASAKLIEGEAEVVPSLPAPGSGGTKMPKA*
Ga0066903_1031865381	3300005764	Tropical Forest Soil	MTDEHIERAIEFIKEQLAKREAGANAKMIEGEAEVVPSLPAHGSGGTKMPKPKVSLSKSP
Ga0066903_1042892691	3300005764	Tropical Forest Soil	EHRNPIKDMTDEQLERSIELINEMIAQRDAGASAKVIEGEAEVVPSLPTPGIGGTKMPKG
Ga0066903_1048834381	3300005764	Tropical Forest Soil	ERGIEIIKELIAKRDAAANAKVIEGEAEVVPSLPAPGSGDTKMAKP*
Ga0066903_1050112103	3300005764	Tropical Forest Soil	KAMTDEQLERAIEVIEEMIRQRDAGEGTKVIEGETEVVPSLPAPGSGGTKMPKV*
Ga0066903_1050136882	3300005764	Tropical Forest Soil	MKVEHSSTIKQMSDEQIEQAIEYIQTMLAAQADEAAKVIEGEAEVVPSLPAPGSGGTKMPKV*
Ga0066903_1054483641	3300005764	Tropical Forest Soil	EMTDEQLEWSIELIKELIAKREAGANAKVIEGEAEVVPSLPAPGSGGTKMRKA*
Ga0066903_1060684351	3300005764	Tropical Forest Soil	RERKVEHSNAIKEMTDEQLEWSIELIKELIAKREAGANATVIEGEAEVVPSLPVPGSGGTKMAKA*
Ga0066903_1065317762	3300005764	Tropical Forest Soil	QIERSIEFIKEMIAKRDAAANAKVIEGEAEVVPSLPAPGSGGTKMPKA*
Ga0066903_1080512111	3300005764	Tropical Forest Soil	EHSGGVKAMTDEQLERSLEIIKAMIAAKQQSGENAKVIEGKAEVVPSLPAPGSGGTKMPTV*
Ga0066903_1081537931	3300005764	Tropical Forest Soil	KLEHSGGVKAMTDEQLERTMDILRDAIARREAGANAKVIEGGAEVVPSLPAPGSGGTKMPKA*
Ga0066903_1082271632	3300005764	Tropical Forest Soil	RSIEFIKEQLARREAGANAKVIEGEAEVVPSLLVPGSGGSKMPKG*
Ga0066903_1083680241	3300005764	Tropical Forest Soil	VKALSDEQLERTMEILREAIAKREAEANAKVIEGEAEVVPSLRRPGSGRAPNPRPKLSLSKSP*
Ga0066903_1090068432	3300005764	Tropical Forest Soil	KEMTDEQLERSIELIKELIAKREAGANAKVIEGEAEVVPSLPAPGSGGTKMLKA*
Ga0126384_107183403	3300010046	Tropical Forest Soil	VKDMTDEELERSLAFIEEMLAQREAGANAKVIEGEAEVVPSLQAPGSGGTNSPKA*
Ga0126370_101647022	3300010358	Tropical Forest Soil	VALIEEMLAQREAGANARVIEGEAEVVPSLPAPGSLPAPGSGGTKMPKA*
Ga0126376_102023121	3300010359	Tropical Forest Soil	QEWDEQIERSIEIIKEILAQRDAAANAKVIEEEAEVVPSLPAPGSGGTKMPKAKVSLSKSP*
Ga0126376_112864021	3300010359	Tropical Forest Soil	KVEHRNPVKDMTDEQLERALEAIETLMRQRGLDAKVIEGEAEVVPSLPAPGSGGTKTPKA
Ga0126376_121429802	3300010359	Tropical Forest Soil	GVKAMTDEQLERSLALIEEMLAQREAGANARVIEGEAEVVPSLPAPGSGGTKMP*
Ga0126372_122618001	3300010360	Tropical Forest Soil	MTDEQLERSIELIQEMIAKRDAGLNAKVIEGEAEVVPSLPAPGS
Ga0126372_124388171	3300010360	Tropical Forest Soil	MTDEQLERSLALIEEMLAQREAGANARVIEGEAEVVPSLPAPGSGGTKMP*
Ga0126378_108770282	3300010361	Tropical Forest Soil	MQVEHSGGIKAMTDEQIERTIEVIKEILAAREAGANAMVIEAEAEVVPSLPAPGSGGTKMPKP*
Ga0126378_115781591	3300010361	Tropical Forest Soil	KVEHSNAIKDMTTEQIERSIELIKEMLAQREAGANVKVIEGETEVVPSLPAPGTKMPKA*
Ga0126378_117300661	3300010361	Tropical Forest Soil	AMTDEQLERSLALIEEMLAQREAGANARVIEGEAEVIPSLPAPVSAKNS*
Ga0126377_108250841	3300010362	Tropical Forest Soil	GVKAMTDEQLERSLALIEEMLAQREAGANARVIEGEAEVIPSLPAPVSAKNS*
Ga0126377_115337082	3300010362	Tropical Forest Soil	DEELEQSIEILKALIAERDAGVNAKVIEGDAEVVPSLPAPGSGGTKMPKA*
Ga0126379_101465741	3300010366	Tropical Forest Soil	MTDDQIERSIEIIKEILAQREAAANAKVIEGEAEVVPSLPAPGSGGTKMPKV*
Ga0126379_108613962	3300010366	Tropical Forest Soil	DEQLERGIEIIKELIAKRDAAANAKVIEGEAEVVPSLPAPGSGGTKMPKP*
Ga0126381_1002811584	3300010376	Tropical Forest Soil	LERTLEAIESLMAQRAAGLGANAKVIEGEAEVVPSLPAPGRGTKMPKA*
Ga0126381_1005143272	3300010376	Tropical Forest Soil	MSDEQLEQGIELIKQMIAERDAAANAKVIEGEAEVVPSLPAPGRGGTKMPKV*
Ga0126381_1007767033	3300010376	Tropical Forest Soil	VALIEEMLAQREAGANARVIEGEAEVVPSLPAPGSLPAPGSGGTKMPEA
Ga0126381_1013754312	3300010376	Tropical Forest Soil	EQLERGIEIIKELIAKRDAAANAKVIEGEAEEVWALPAPGSDGTKPPKA*
Ga0126381_1021904262	3300010376	Tropical Forest Soil	RATQQIERSIEYIKEQLAQREAGANAKVIEGEAKVVPSLPAPGSGGTKMPKAKASLSKSP
Ga0126381_1032474891	3300010376	Tropical Forest Soil	PSGGIKAMTDEQIERSIEIIKEILAQREAAANAKVIEGEAEVVPSLPAPGSGGTKMSKP*
Ga0126381_1047183172	3300010376	Tropical Forest Soil	EEIERSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPKV*
Ga0126383_119043031	3300010398	Tropical Forest Soil	IKAMTDEQIERSIEFIKEQLARREAEANAKVIEGEAEVVTSLPARGSGGTKMPKA*
Ga0124844_10790221	3300010868	Tropical Forest Soil	KVDHSGGVKAMTDEQIERAIEAIEELIAKRQAGANAKVIEGEAEVVPSLPAPGSGGTKMPKA*
Ga0137363_111473361	3300012202	Vadose Zone Soil	MTDEQIERSIELIKQMLAEREAGANAKVIEGEAEEVSALPAPASGGTKPPKS*
Ga0126375_112995961	3300012948	Tropical Forest Soil	MTDEQIERSIEFIKERLAKREAGANAKVIEGEAEVVPSLRAPGNGGIKMQKT*
Ga0126369_109082461	3300012971	Tropical Forest Soil	ERSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPKV*
Ga0126369_113652542	3300012971	Tropical Forest Soil	GGVKAMSDEQLARSIEIIEEMIAQRDAAANAKVIEGEAEVIPSLPAPGSGGTKMPKA*
Ga0126369_122973882	3300012971	Tropical Forest Soil	MTDEQLERGIEIIKELIAKRDAAANAKVIEGEAEVVPSLPAPGSGGTKMPKAKVSLSKSP
Ga0182041_104408602	3300016294	Soil	MTDEQIERSIEVIKQILAQREAGANAKVIEGEAEVVPSLPAPGSGGTKMPKG
Ga0182034_119773921	3300016371	Soil	EEIERSIELIKAMIAERDAGANAKVIEGEAEVVPGLPAPGSGGTKMPKV
Ga0182034_120190642	3300016371	Soil	MSDEQIEEAIAAIRAMLDVRADDAAQVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0182037_109273411	3300016404	Soil	MTDEQIERSIEVIKQILAQREAGANAKVIEGEAEVVPSLPAPGSGGTKM
Ga0182039_109778421	3300016422	Soil	GVKAMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0182039_118255862	3300016422	Soil	GVKAMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPGLPAPGSGGTKMPKV
Ga0182039_122116732	3300016422	Soil	DEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0126371_131749102	3300021560	Tropical Forest Soil	MTDEQIERSIELIKEMLAQREAGANAKVIEGEAEVVPSLPAPGSGGTKMPK
Ga0207665_112378912	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKVEHSQGVKAMTDEQLERGIELIQEMLAQREAGVNAKVIEGEAEVVPSLPAPGSGGTKKPKV
Ga0209684_10332961	3300027527	Tropical Forest Soil	KAMTDEQLERSIEVIKELIAQRDAGLSAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0209684_10766082	3300027527	Tropical Forest Soil	LEHSGGVKAMTDEQLERSLELIEEMIAKRDAAANAKVIEGEAEVVPSLPPPVSAKNS
Ga0209465_100185131	3300027874	Tropical Forest Soil	KAMTDEQLERGIEIIKELIAKRDAAANAKVIEGEAEVVPSLPAPGSGGTKMPKP
Ga0318541_101462192	3300031545	Soil	LWGASNAPNGRDQATTDEQIDRAIAFIEEQLAKREAANAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0318571_101752913	3300031549	Soil	QMSDEQIEEAIAAIRAMLDVRADDAAQVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0318515_106419572	3300031572	Soil	MSDEQIEEAIELIQTMLAARAGEAAKVIEGEAEVVPSLPAPGSGGT
Ga0310915_104651062	3300031573	Soil	LWGASNAPNGRDQAMTDEQIDRAIAFIEEQLAKREAANAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0310915_107567102	3300031573	Soil	MKVEHSGGIKAMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0310915_110697202	3300031573	Soil	MTDEQIERSIEVIKQILAQREAGANAKVIEGEAEVVPSLPAPGSGGTKMRKA
Ga0318496_107565331	3300031713	Soil	HSGGVKAMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPGLPAPGSGGTKMPKV
Ga0306917_106948962	3300031719	Soil	KFKHSGGVKAMSDEQIERAIEFIKAMIAQRDAGANAEVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0318501_101456073	3300031736	Soil	IKDMTDEQIERSIELIQELLAQREAGEAAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0306918_111388991	3300031744	Soil	LEHSGGVKAMSDEQIEEAIELIQTMLAARAGEAAKVIEGEAEVVPSLPAPGSGGT
Ga0318554_107697761	3300031765	Soil	KAMTDEQIERGIELIQEILAQREAEANAKVIEGEAEVVPSLPAPGSGGTKMPKP
Ga0318509_107973681	3300031768	Soil	AMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPGLPAPGSGGTKMPKV
Ga0318546_101396833	3300031771	Soil	GGVKAMSDEQIEEAIELIQTMLAARAGEAAKVIEGEAEVVPSLPAPGSGGT
Ga0318566_106608951	3300031779	Soil	IPREHEVEHRGGVKGMTEEQIIDAIEAIEGFLARRAGEQAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0318576_103060193	3300031796	Soil	QIDRAIAFIEEQLAKREAANAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0318567_108362142	3300031821	Soil	RSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0310917_103191652	3300031833	Soil	VEHSGGVKAMTDAQLERAIAMVEELIRQRDAGQSAKVIEGETEVVPSLPAPGSGGTKMPK
Ga0310917_105506481	3300031833	Soil	SGGVKAMTDEQIERSIEIIKGMLAERDAARKAKVIEGEAEVVPSLPAPGSGGTMMPKAKVSLSKSP
Ga0318512_100450564	3300031846	Soil	GGIKAMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPGLPAPGSGGTKMPKV
Ga0318512_106414152	3300031846	Soil	VEHSGGIKAMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPK
Ga0318544_102365432	3300031880	Soil	QRGGVKAMSDEQIEEAIELIQTMLAARAGEAAKVIEGEAEVVPSLPAPGSGGT
Ga0306925_109953302	3300031890	Soil	DEQIERSIELIKGMLAERDAARKAKVIEGEAEVVPSLPAPGSGGTKIPKAKVSLSKSP
Ga0306921_102662101	3300031912	Soil	MTDEQIERSIELIKEMLAQREAGANAKLIEGEAEVVPSLPAPGSGGTKMPKA
Ga0306921_107600472	3300031912	Soil	MTDEQLERSIEVIKELIAQRDAGLSAKVIEGEAEVVPSLPAPGSGGTKMPKA
Ga0310912_109040911	3300031941	Soil	EQIEEAIAAIRAMLDVRADDAAQVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0310910_106114981	3300031946	Soil	MTDEQIERSIEVIKQILAQREAGANAKVIEGEAEVVPSLPAPGSGGTKVPKAKVSLSKSP
Ga0310909_107125533	3300031947	Soil	SNAPNGRDQAMTDEQIDRAIAFIEEQLAKREAANAKVIEGEAEVVPSLPAPGSGGTKMPK
Ga0318530_101808682	3300031959	Soil	HSGGIKAMTDEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPSLPAPGSGGTKMPKV
Ga0306922_103347765	3300032001	Soil	ELQVEHSGGVKAMSDEQIETAIEAIKAMLEARASEAAKVIEGTASLPAPNGQST
Ga0306922_104147142	3300032001	Soil	LWGASNAPNGRDQATTDEQIDRAIAFIEEQLAKREAANAKVIEGEAEVVPSLPAPGSGGTKM
Ga0318559_104828901	3300032039	Soil	LERAIEVIEELIRQRDAGQSAKVIEGETEVVPSLPAPGSGGTKMPKV
Ga0318570_104169961	3300032054	Soil	DEEIERSIELIKAMIAERDAGANAKVIEGEAEVVPGLPAPGSGGTKMPKV
Ga0318505_105451211	3300032060	Soil	QIDRAIAFIEEQLARRDAGANAKLIEGKAEVAPSLPAPGSGGTKTPTA
Ga0318577_104523812	3300032091	Soil	IEVIKQILAEREAGANAKVIEGEAEVVPSLPAPGSGGTKMPKAKVSLSKSP
Ga0306920_1006111944	3300032261	Soil	FEPSGGVKAMTDEQIERSIEVIQQILAEREAGANATVIEGEGEVVPSLPAPGSGGTKMPK
Ga0306920_1042264442	3300032261	Soil	AMTGEQIERSIELIKGMLAERDAARKAKVIEGEAEVVPSLPAPGSGGTQIPKAKVSLSKS
Ga0310914_101398851	3300033289	Soil	RAQRGGVKAMSDEQIEEAIELIQTMLAARAGEAAKVIEGEAEVVPSLPAPGSGGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences